mRNA_M-pyrifera_M_contig92115.21330.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92115.21330.1
Unique NamemRNA_M-pyrifera_M_contig92115.21330.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92115.21330.1 vs. uniprot
Match: A0A2E7K5Q5_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K5Q5_9PLAN)

HSP 1 Score: 495 bits (1275), Expect = 2.930e-170
Identity = 248/256 (96.88%), Postives = 252/256 (98.44%), Query Frame = 1
Query:    1 KTVGTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIDRKRWKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLLKSIAPGIGLSVFAVVYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGELMQPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAYGIGNVTTVLRRWKSEPVSLAQTQTWATH 768
            KT GTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAI+RKRWKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLLKSIAPGIGLSVFA+VYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGEL+QPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAYG+GNVT VLRRWKS P SLAQTQTWATH
Sbjct:  298 KTAGTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIERKRWKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLLKSIAPGIGLSVFAIVYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGELIQPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAYGVGNVTMVLRRWKSAPASLAQTQTWATH 553          
BLAST of mRNA_M-pyrifera_M_contig92115.21330.1 vs. uniprot
Match: A0A518A8Y3_9PLAN (Uncharacterized protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A8Y3_9PLAN)

HSP 1 Score: 451 bits (1160), Expect = 9.500e-153
Identity = 222/256 (86.72%), Postives = 239/256 (93.36%), Query Frame = 1
Query:    1 KTVGTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIDRKRWKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLLKSIAPGIGLSVFAVVYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGELMQPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAYGIGNVTTVLRRWKSEPVSLAQTQTWATH 768
            KT G A+VAAYLCYFPLQFLDIAIDLKTFRPISFGVPL+LFAL+A++RKRWKSA VLLLLCLAAKEDYAIILGPLGLWIAWRAFQE K + +  +  LLK++APGIGLSVFAVVYLALVVKVLIPWFR GTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGEL+QPDTFIYALALLVPLGLLPL SPGRL+VGLP+FGLLCLNELAHDPRHHFHAPIVPI+CWAAAYGIGNV  +LRRWK +  SL+QTQTWATH
Sbjct:  302 KTAGKAMVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLMLFALDALERKRWKSATVLLLLCLAAKEDYAIILGPLGLWIAWRAFQERKQQQQDKQPGLLKTVAPGIGLSVFAVVYLALVVKVLIPWFRSGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGELIQPDTFIYALALLVPLGLLPLLSPGRLMVGLPIFGLLCLNELAHDPRHHFHAPIVPIVCWAAAYGIGNVPVLLRRWKKQTASLSQTQTWATH 557          
BLAST of mRNA_M-pyrifera_M_contig92115.21330.1 vs. uniprot
Match: A0A517RI34_9PLAN (Uncharacterized protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RI34_9PLAN)

HSP 1 Score: 393 bits (1009), Expect = 3.870e-130
Identity = 197/254 (77.56%), Postives = 216/254 (85.04%), Query Frame = 1
Query:    7 VGTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIDRKRWKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLLKSIAPGIGLSVFAVVYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGELMQPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAYGIGNVTTVLRRWKSEPVSLAQTQTWATH 768
            VG  IVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAI+ KRWK+ +VLLLL L AKEDYAI+LGPLGLWIAW+ ++  K ES   K  LLK++APG+GLS+FAVVYLA VVKV IPWFR G QVHYVGYFQKFGNSLGEVV NILFNP LLLGEL +PDTFIYALALLVPLG LPLFSP RLLV  P+FGLLCLNELAHDPRHHFHAPIVPILCWAAA+G GN+   + RWK + +     QT+ATH
Sbjct:  302 VGKTIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIEMKRWKTTVVLLLLTLTAKEDYAIMLGPLGLWIAWQQWRTRKQESATAKPNLLKTVAPGVGLSLFAVVYLAFVVKVAIPWFRSGEQVHYVGYFQKFGNSLGEVVQNILFNPALLLGELFRPDTFIYALALLVPLGFLPLFSPSRLLVATPIFGLLCLNELAHDPRHHFHAPIVPILCWAAAFGAGNIPAFIDRWKWK-IKSTTAQTFATH 554          
BLAST of mRNA_M-pyrifera_M_contig92115.21330.1 vs. uniprot
Match: A0A518IEX5_9PLAN (Uncharacterized protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IEX5_9PLAN)

HSP 1 Score: 390 bits (1002), Expect = 4.360e-129
Identity = 192/255 (75.29%), Postives = 215/255 (84.31%), Query Frame = 1
Query:    4 TVGTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIDRKRWKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLLKSIAPGIGLSVFAVVYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGELMQPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAYGIGNVTTVLRRWKSEPVSLAQTQTWATH 768
            T+G A+VAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAI+ KRWK+ +VLLL  L AKEDYAIILGPLGLWIAW+ +   K ES   K   LK++APG+GLS+FAV+YL  VVKV IPWFR G QVHYVGYF KFGNSLGEVV NILFNP LLLGEL +PDTFIY LAL+VPLG LPLFSP R+LV  P+FGLLCLNELAHDPRHHFHAPIVPILCWAAA+G+GN+ + L RWK + +  A TQT+A H
Sbjct:  301 TIGKAMVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIELKRWKTTVVLLLFTLTAKEDYAIILGPLGLWIAWQQWSMRKQESATTKPNFLKTVAPGVGLSLFAVLYLGFVVKVAIPWFRSGEQVHYVGYFSKFGNSLGEVVQNILFNPALLLGELFRPDTFIYGLALIVPLGFLPLFSPSRILVAAPIFGLLCLNELAHDPRHHFHAPIVPILCWAAAFGVGNIPSFLERWKGK-IKPATTQTFAMH 554          
BLAST of mRNA_M-pyrifera_M_contig92115.21330.1 vs. uniprot
Match: A0A350K704_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K704_9PLAN)

HSP 1 Score: 360 bits (924), Expect = 2.250e-121
Identity = 180/256 (70.31%), Postives = 208/256 (81.25%), Query Frame = 1
Query:    4 TVGTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIDRKRWKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLLKSIAPGIGLSVFAVVYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGELMQPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAYGIGNVTTVLRRWKSE-PVSLAQTQTWATH 768
            T G A+VAAYLCYFPLQFLDIAIDLKTFRPISFGVP+LLFALEA++ KRWK+A +LLLL L AKED+AIILGPLGLWIAW+ + E K  S  +   L +++APGIG+SVFAV+YL  VVK  IPWFR G QVHYVGYF  FG++LGEVV NILFNPG+LLGEL++PDT IY LALLVPLGLLP+ SP R LV LPLFGLLCLNE+AHDPRHHFHAPIVPILCWA A+ +GN+  +L   KS   +  A  Q +A H
Sbjct:   31 TAGKAMVAAYLCYFPLQFLDIAIDLKTFRPISFGVPVLLFALEALELKRWKTAAILLLLSLTAKEDFAIILGPLGLWIAWQQWCERKQLSTESNQSLFRTVAPGIGVSVFAVLYLLFVVKYAIPWFRSGEQVHYVGYFSNFGSTLGEVVKNILFNPGMLLGELLRPDTLIYFLALLVPLGLLPVLSPSRTLVALPLFGLLCLNEIAHDPRHHFHAPIVPILCWATAFALGNILKLLEEHKSRFKIPPASGQNFAVH 286          
BLAST of mRNA_M-pyrifera_M_contig92115.21330.1 vs. uniprot
Match: A0A517VV98_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VV98_9PLAN)

HSP 1 Score: 369 bits (948), Expect = 4.860e-121
Identity = 185/254 (72.83%), Postives = 211/254 (83.07%), Query Frame = 1
Query:    7 VGTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIDRKRWKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLLKSIAPGIGLSVFAVVYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGELMQPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAYGIGNVTTVLRRWKSEPVSLAQTQTWATH 768
            +G A+VAAYLCYFPLQFLDIAIDLKTFRPIS GVP LLFAL+AI++KRWKSAI+LL L L AKEDYAIILGPLGLWIA++ +QE+K ++   K  L K + PGI LS+FAV+YL+ VVK+LIPWFR G QVHYVGYF KFG+SLGEVV NILFNP LL GEL++PDTFIY LAL+VPLG LPLFSP RLLV  PLFGLLCLNELAHDPRHHFHAPIVPILCWAAA G+GN+   + R  S    +   QT+ATH
Sbjct:  302 IGKAMVAAYLCYFPLQFLDIAIDLKTFRPISLGVPALLFALDAIEQKRWKSAILLLALTLTAKEDYAIILGPLGLWIAYQQWQESKQDNTTTKPGLFKVLTPGISLSLFAVIYLSFVVKILIPWFRSGEQVHYVGYFSKFGSSLGEVVQNILFNPSLLFGELVRPDTFIYGLALIVPLGFLPLFSPSRLLVAAPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAIGLGNIPLFIERC-SLKTKVTAAQTFATH 554          
BLAST of mRNA_M-pyrifera_M_contig92115.21330.1 vs. uniprot
Match: A6C4J1_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A6C4J1_9PLAN)

HSP 1 Score: 357 bits (916), Expect = 3.840e-116
Identity = 179/256 (69.92%), Postives = 207/256 (80.86%), Query Frame = 1
Query:    4 TVGTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIDRKRWKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLLKSIAPGIGLSVFAVVYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGELMQPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAYGIGNVTTVLRRWKSE-PVSLAQTQTWATH 768
            T G A+VAAYLCYFPLQFLDIAIDLKTFRPISFGVP+LLFALE ++ KRWK+A +LLLL L AKED+AIILGPLGLWIAW+ +   K  S  +K  L +++APGIG+SVFAV+YL  VVK  IPWFR G QVHYVGYF  FG++LGEVV NILFNPG+LLGEL++PDT IY LALLVPLGLLP+ SP R LV LPLFGLLCLNE+AHDPRHHFHAPIVPILCWA A+ +GN+  +L   KS   +  A  Q +A H
Sbjct:  298 TAGKAMVAAYLCYFPLQFLDIAIDLKTFRPISFGVPVLLFALEGLELKRWKTAAILLLLSLTAKEDFAIILGPLGLWIAWQQWCARKQLSTESKRSLFRTVAPGIGVSVFAVLYLLFVVKYAIPWFRSGEQVHYVGYFSNFGSTLGEVVKNILFNPGMLLGELIRPDTLIYFLALLVPLGLLPVLSPSRTLVALPLFGLLCLNEIAHDPRHHFHAPIVPILCWATAFALGNILKLLEEHKSRFKIIPASGQNFAVH 553          
BLAST of mRNA_M-pyrifera_M_contig92115.21330.1 vs. uniprot
Match: A0A517VGE6_9PLAN (Uncharacterized protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VGE6_9PLAN)

HSP 1 Score: 350 bits (899), Expect = 1.340e-113
Identity = 175/249 (70.28%), Postives = 201/249 (80.72%), Query Frame = 1
Query:    4 TVGTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIDRKRWKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLLKSIAPGIGLSVFAVVYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGELMQPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAYGIGNVTTVLRR----WKSEPVS 738
            T G A+VAAYLCYFPLQFLDIAIDLKTFRPISFGVP+LLFALEA++ KRWK+A +LL+L L AKED+AIILGPLGLWIAW+ + E K     +K  LL+++ PG  +SVFAV+YL  VVK  IPWFR G QVHYVGYF  FG++LGEV+ NILFNPGLLLGEL +PDT IY LALLVPLGLLPL SP R+LV LPLF LLCLNE+AHDPRHHFHAPIVPILCWA A  +GN+  +L R    +K  P S
Sbjct:  298 TAGKAMVAAYLCYFPLQFLDIAIDLKTFRPISFGVPVLLFALEALELKRWKTAAILLMLTLTAKEDFAIILGPLGLWIAWQQWCERKQLPDESKQSLLRTVGPGTVVSVFAVLYLLFVVKYAIPWFRSGAQVHYVGYFSNFGSTLGEVIKNILFNPGLLLGELFRPDTLIYFLALLVPLGLLPLLSPSRILVALPLFSLLCLNEIAHDPRHHFHAPIVPILCWATACAMGNIPKLLERHAPRFKKSPTS 546          
BLAST of mRNA_M-pyrifera_M_contig92115.21330.1 vs. uniprot
Match: A0A3C0ACZ4_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0ACZ4_9PLAN)

HSP 1 Score: 342 bits (876), Expect = 4.570e-112
Identity = 175/245 (71.43%), Postives = 201/245 (82.04%), Query Frame = 1
Query:    4 TVGTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIDRKRWKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLL---KSIAPGIGLSVFAVVYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGELMQPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAYGIGNVTTVLRRWKSE 729
            T G A+VAAYLCYFPL FLDI+IDLKTFRPISFGVPLLLFALEAI+ K WK+A++LLLL LA+KEDYAIILGPLGLWIAWRAFQE K  +  + S  L   K+IAPGI LS+FAVVYL +VV VLIP FR G +VHYVGYF +FG +  E+V NILFNP LL G+L+ PDT +  LA LVPLG LPLFSP RLLV +PLFGLLCLNE+A DPRHHFHAPIVPIL WAAAYG+ N T VL+R++ +
Sbjct:  133 TAGKAMVAAYLCYFPLHFLDISIDLKTFRPISFGVPLLLFALEAIELKHWKTALILLLLTLASKEDYAIILGPLGLWIAWRAFQERKRGTSTSPSSNLEKIKAIAPGISLSLFAVVYLPVVVVVLIPLFRDGAKVHYVGYFSQFGETPTEIVENILFNPSLLFGQLVHPDTLMNLLAFLVPLGFLPLFSPSRLLVAVPLFGLLCLNEVASDPRHHFHAPIVPILAWAAAYGLTNATEVLQRFRKQ 377          
BLAST of mRNA_M-pyrifera_M_contig92115.21330.1 vs. uniprot
Match: A0A2E2C2C5_9PLAN (Uncharacterized protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C2C5_9PLAN)

HSP 1 Score: 343 bits (881), Expect = 7.300e-111
Identity = 176/245 (71.84%), Postives = 202/245 (82.45%), Query Frame = 1
Query:    4 TVGTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIDRKRWKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLL---KSIAPGIGLSVFAVVYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVVSNILFNPGLLLGELMQPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGLLCLNELAHDPRHHFHAPIVPILCWAAAYGIGNVTTVLRRWKSE 729
            T G A+VAAYLCYFPL FLDI+IDLKTFRPISFGVPLLLFALEAI+ K WK+A++LLLL LA+KEDYAIILGPLGLWIAWRAFQE K  +  + S  L   K+IAPGI LS+FAVVYLA+VV VLIP FR G +VHYVGYF +FG +  E+V NILFNP LL G+L+ PDT +  LA LVPLG LPLFSP RLLV +PLFGLLCLNE+A DPRHHFHAPIVPIL WAAAYG+ N T VL+R++ +
Sbjct:  299 TAGKAMVAAYLCYFPLHFLDISIDLKTFRPISFGVPLLLFALEAIELKHWKTALILLLLTLASKEDYAIILGPLGLWIAWRAFQERKRGTSTSPSSNLEKIKAIAPGISLSLFAVVYLAVVVVVLIPLFRDGAKVHYVGYFSQFGETPTEIVENILFNPSLLFGQLVHPDTLMNLLAFLVPLGFLPLFSPSRLLVAVPLFGLLCLNEVASDPRHHFHAPIVPILAWAAAYGLTNATEVLQRFRKQ 543          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92115.21330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7K5Q5_9PLAN2.930e-17096.88Uncharacterized protein n=6 Tax=Gimesia TaxID=1649... [more]
A0A518A8Y3_9PLAN9.500e-15386.72Uncharacterized protein n=3 Tax=Gimesia panareensi... [more]
A0A517RI34_9PLAN3.870e-13077.56Uncharacterized protein n=1 Tax=Gimesia alba TaxID... [more]
A0A518IEX5_9PLAN4.360e-12975.29Uncharacterized protein n=1 Tax=Gimesia fumaroli T... [more]
A0A350K704_9PLAN2.250e-12170.31Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A517VV98_9PLAN4.860e-12172.83Uncharacterized protein n=2 Tax=Gimesia aquarii Ta... [more]
A6C4J1_9PLAN3.840e-11669.92Uncharacterized protein n=5 Tax=Gimesia TaxID=1649... [more]
A0A517VGE6_9PLAN1.340e-11370.28Uncharacterized protein n=1 Tax=Gimesia algae TaxI... [more]
A0A3C0ACZ4_9PLAN4.570e-11271.43Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A2E2C2C5_9PLAN7.300e-11171.84Uncharacterized protein n=3 Tax=Planctomycetaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92115contigM-pyrifera_M_contig92115:2..769 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score359.4
Seed ortholog evalue1.4e-96
Seed eggNOG ortholog344747.PM8797T_25541
KEGG koko:K07778
KEGG Pathwayko02020,map02020
KEGG ModuleM00479
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Predicted membrane protein (DUF2079)
EggNOG OGs2J21E@203682,COG3463@1,COG3463@2
EC2.7.13.3
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko02022
Exons1
Model size768
Cds size768
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816834.440017-CDS-M-pyrifera_M_contig92115:1..7691622816834.440017-CDS-M-pyrifera_M_contig92115:1..769Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92115 2..769 -
1692278206.0487034-CDS-M-pyrifera_M_contig92115:1..7691692278206.0487034-CDS-M-pyrifera_M_contig92115:1..769Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92115 2..769 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92115.21330.1prot_M-pyrifera_M_contig92115.21330.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92115 2..769 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92115.21330.1

>prot_M-pyrifera_M_contig92115.21330.1 ID=prot_M-pyrifera_M_contig92115.21330.1|Name=mRNA_M-pyrifera_M_contig92115.21330.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp
KTVGTAIVAAYLCYFPLQFLDIAIDLKTFRPISFGVPLLLFALEAIDRKR
WKSAIVLLLLCLAAKEDYAIILGPLGLWIAWRAFQENKPESKANKSVLLK
SIAPGIGLSVFAVVYLALVVKVLIPWFRGGTQVHYVGYFQKFGNSLGEVV
SNILFNPGLLLGELMQPDTFIYALALLVPLGLLPLFSPGRLLVGLPLFGL
LCLNELAHDPRHHFHAPIVPILCWAAAYGIGNVTTVLRRWKSEPVSLAQT
QTWATH
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mRNA from alignment at M-pyrifera_M_contig92115:2..769-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92115.21330.1 ID=mRNA_M-pyrifera_M_contig92115.21330.1|Name=mRNA_M-pyrifera_M_contig92115.21330.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig92115:2..769- (Macrocystis pyrifera P11B4 male)
AAAACCGTGGGCACTGCAATCGTTGCAGCCTATCTCTGCTACTTCCCCCT GCAGTTTCTGGACATCGCCATCGATCTCAAAACATTCCGACCGATCTCCT TCGGCGTTCCCCTGCTGCTGTTCGCCCTGGAGGCGATCGATCGGAAGCGC TGGAAATCTGCGATCGTCCTGCTGCTGCTCTGCCTGGCTGCCAAGGAAGA CTATGCGATTATCCTGGGACCTTTGGGGCTCTGGATCGCCTGGCGCGCGT TTCAGGAAAATAAACCGGAATCGAAAGCGAATAAATCCGTGCTGCTGAAA AGCATCGCCCCGGGCATCGGTCTGTCAGTGTTCGCGGTCGTTTATCTGGC ACTGGTTGTGAAAGTTTTGATCCCCTGGTTCCGCGGTGGCACACAGGTGC ATTACGTCGGTTACTTTCAGAAATTCGGGAATTCCCTGGGCGAAGTCGTC AGCAACATTCTGTTCAATCCGGGACTGCTGCTCGGCGAACTGATGCAGCC CGATACGTTCATCTATGCCCTCGCACTGCTCGTCCCCCTCGGCCTGCTGC CCCTGTTCTCACCGGGACGGCTGCTGGTGGGGCTGCCTCTGTTCGGACTA CTCTGTCTGAACGAACTGGCTCACGATCCACGACACCATTTCCACGCTCC CATTGTCCCCATTCTCTGCTGGGCTGCGGCTTATGGAATCGGCAATGTCA CGACGGTGCTGCGTCGCTGGAAATCGGAACCCGTATCTCTGGCACAGACA CAGACCTGGGCGACGCAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92115:2..769-

>mRNA_M-pyrifera_M_contig92115.21330.1 ID=mRNA_M-pyrifera_M_contig92115.21330.1|Name=mRNA_M-pyrifera_M_contig92115.21330.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig92115:2..769- (Macrocystis pyrifera P11B4 male)
AAAACCGTGGGCACTGCAATCGTTGCAGCCTATCTCTGCTACTTCCCCCT
GCAGTTTCTGGACATCGCCATCGATCTCAAAACATTCCGACCGATCTCCT
TCGGCGTTCCCCTGCTGCTGTTCGCCCTGGAGGCGATCGATCGGAAGCGC
TGGAAATCTGCGATCGTCCTGCTGCTGCTCTGCCTGGCTGCCAAGGAAGA
CTATGCGATTATCCTGGGACCTTTGGGGCTCTGGATCGCCTGGCGCGCGT
TTCAGGAAAATAAACCGGAATCGAAAGCGAATAAATCCGTGCTGCTGAAA
AGCATCGCCCCGGGCATCGGTCTGTCAGTGTTCGCGGTCGTTTATCTGGC
ACTGGTTGTGAAAGTTTTGATCCCCTGGTTCCGCGGTGGCACACAGGTGC
ATTACGTCGGTTACTTTCAGAAATTCGGGAATTCCCTGGGCGAAGTCGTC
AGCAACATTCTGTTCAATCCGGGACTGCTGCTCGGCGAACTGATGCAGCC
CGATACGTTCATCTATGCCCTCGCACTGCTCGTCCCCCTCGGCCTGCTGC
CCCTGTTCTCACCGGGACGGCTGCTGGTGGGGCTGCCTCTGTTCGGACTA
CTCTGTCTGAACGAACTGGCTCACGATCCACGACACCATTTCCACGCTCC
CATTGTCCCCATTCTCTGCTGGGCTGCGGCTTATGGAATCGGCAATGTCA
CGACGGTGCTGCGTCGCTGGAAATCGGAACCCGTATCTCTGGCACAGACA
CAGACCTGGGCGACGCATAAAACCGTGGGCACTGCAATCGTTGCAGCCTA
TCTCTGCTACTTCCCCCTGCAGTTTCTGGACATCGCCATCGATCTCAAAA
CATTCCGACCGATCTCCTTCGGCGTTCCCCTGCTGCTGTTCGCCCTGGAG
GCGATCGATCGGAAGCGCTGGAAATCTGCGATCGTCCTGCTGCTGCTCTG
CCTGGCTGCCAAGGAAGACTATGCGATTATCCTGGGACCTTTGGGGCTCT
GGATCGCCTGGCGCGCGTTTCAGGAAAATAAACCGGAATCGAAAGCGAAT
AAATCCGTGCTGCTGAAAAGCATCGCCCCGGGCATCGGTCTGTCAGTGTT
CGCGGTCGTTTATCTGGCACTGGTTGTGAAAGTTTTGATCCCCTGGTTCC
GCGGTGGCACACAGGTGCATTACGTCGGTTACTTTCAGAAATTCGGGAAT
TCCCTGGGCGAAGTCGTCAGCAACATTCTGTTCAATCCGGGACTGCTGCT
CGGCGAACTGATGCAGCCCGATACGTTCATCTATGCCCTCGCACTGCTCG
TCCCCCTCGGCCTGCTGCCCCTGTTCTCACCGGGACGGCTGCTGGTGGGG
CTGCCTCTGTTCGGACTACTCTGTCTGAACGAACTGGCTCACGATCCACG
ACACCATTTCCACGCTCCCATTGTCCCCATTCTCTGCTGGGCTGCGGCTT
ATGGAATCGGCAATGTCACGACGGTGCTGCGTCGCTGGAAATCGGAACCC
GTATCTCTGGCACAGACACAGACCTGGGCGACGCAT
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