mRNA_M-pyrifera_M_contig92100.21323.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92100.21323.1
Unique NamemRNA_M-pyrifera_M_contig92100.21323.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig92100.21323.1 vs. uniprot
Match: A0A8B7XTS6_ACAPL (WD repeat-containing protein 35-like n=7 Tax=Asteroidea TaxID=7588 RepID=A0A8B7XTS6_ACAPL)

HSP 1 Score: 171 bits (433), Expect = 4.290e-45
Identity = 86/246 (34.96%), Postives = 136/246 (55.28%), Query Frame = 1 
Query:    1 PRLVAAWANGRLTLLKDDADPSPVTLESGLRIVNATWNPQGTVLAVAGHEDGTP------MVFFLDPYGRRLQKLKVPAKEIRGASWDGGGARLVIAADHFLFFANVRPKYTWTLLSPRPASSSAEXXXXXXXXXXNVLVLSLPVPERQEKCVVFQDVLSGERRVKWVPRVAQVRGAGEHALLVCNGAQASSGSGEEAQASLPGMQMVILCDAIGTPLETKFIDLECVDSALTRTHVVVAFRDSLW 720
            P L   + NGR  ++K + D +PV +++G+ +V   WN  G+ LAVAG +          +V F  P+G  L+ LKVP K++   SW+GGG R+ +A D F++FAN+RP Y W   +                   N +V S   PER E+CVVF + +SGER +K+V  +  V   G+H +L     ++             G  +++LC++IGTPLE+K+ID+E +  A+TRTHV+ A +++ +
Sbjct:  226 PTLAICFDNGRAQIMKHENDENPVLIDTGMTVVQIQWNHTGSALAVAGSQKSAQQDKDINVVQFYTPFGEHLRTLKVPGKQLTSVSWEGGGLRIALAVDSFIYFANIRPDYKWGYCA-------------------NTVVYSFSKPERTEQCVVFWETVSGERHIKYVRNLISVTAYGDHCVLATRADESM------------GQYVLVLCNSIGTPLESKYIDIEPIYIAVTRTHVIAASKEAFY 440
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BLAST of mRNA_M-pyrifera_M_contig92100.21323.1 vs. uniprot
Match: UPI0003F0C342 (WD repeat-containing protein 35-like isoform X1 n=2 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0C342)

HSP 1 Score: 168 bits (426), Expect = 3.720e-44
Identity = 86/246 (34.96%), Postives = 139/246 (56.50%), Query Frame = 1 
Query:    1 PRLVAAWANGRLTLLKDDADPSPVTLESGLRIVNATWNPQGTVLAVAGHEDGTP------MVFFLDPYGRRLQKLKVPAKEIRGASWDGGGARLVIAADHFLFFANVRPKYTWTLLSPRPASSSAEXXXXXXXXXXNVLVLSLPVPERQEKCVVFQDVLSGERRVKWVPRVAQVRGAGEHALLVCNGAQASSGSGEEAQASLPGMQMVILCDAIGTPLETKFIDLECVDSALTRTHVVVAFRDSLW 720
            P L   + NGR  +++ + D +PV L++G+ +    WN  G+VLA+AG +          +V F  P+G  L+ LKVP K++   SW+GGG R+ +A D F++FAN+RPKY W   +                   N +V +   PER E CVVF D  + ER +K+V  +  V   G+H +L     +A   +G++  +  P   +++LC++IGTPL++K+ID+E V  A+TRTHV+ + R++ +
Sbjct:  226 PCLALCFDNGRAQVMRSEMDENPVLLDTGMYVAQIQWNQTGSVLAIAGSQKAQQGDKDINVVQFYTPFGEHLRTLKVPGKQMLSCSWEGGGLRIALAVDSFIYFANIRPKYKWGYCA-------------------NTVVYAFTKPERPEHCVVFWDTKNTERYIKYVKNLISVTAYGDHCILAT---KADDTTGQDPDS--PTQYVLVLCNSIGTPLDSKYIDIEPVHVAMTRTHVIASSREAFY 447
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BLAST of mRNA_M-pyrifera_M_contig92100.21323.1 vs. uniprot
Match: A0A1A8E7S5_9TELE (WD repeat domain 35 n=1 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8E7S5_9TELE)

HSP 1 Score: 156 bits (395), Expect = 3.630e-43
Identity = 82/243 (33.74%), Postives = 134/243 (55.14%), Query Frame = 1 
Query:    1 PRLVAAWANGRLTLLKDDADPSPVTLESGLRIVNATWNPQGTVLAVAGH------EDGTPMVFFLDPYGRRLQKLKVPAKEIRGASWDGGGARLVIAADHFLFFANVRPKYTWTLLSPRPASSSAEXXXXXXXXXXNVLVLSLPVPERQEKCVVFQDVLSGERRVKWVPRVAQVRGAGEHALLVCNGAQASSGSGEEAQASLPGMQMVILCDAIGTPLETKFIDLECVDSALTRTHVVVAFRD 711
            P L   + NG+  +++ + D +PV ++S + +V+  WN  G+VLAVAG       E    +V F  P+G  L+ LKV  K++ G +W+GGG R+ +A D +++FAN+RP Y W                       + +V +   PERQE CVVF D  + E+ VK+V  +  +  +G+  +L   G +       E +A  P   ++ILC++IGTPL++K+ID++ +   LT+THV+ A +D
Sbjct:   33 PCLAICFDNGKCQIMRYENDENPVCIDSSMNVVSIQWNHCGSVLAVAGSLRTANMEKEFNVVQFYTPFGEHLRTLKVSGKQMWGIAWEGGGLRIGLAVDSYIYFANIRPDYKW-------------------GYCCSTVVYAYTKPERQEHCVVFWDTKNNEKFVKYVKSLMSITTSGDFCILASKGDETLPQEDAELEAVCPAKYVLILCNSIGTPLDSKYIDIDPMFVTLTKTHVIAASKD 256
[Close]
BLAST of mRNA_M-pyrifera_M_contig92100.21323.1 vs. uniprot
Match: A0A7M7HL57_STRPU (Uncharacterized protein n=4 Tax=Echinacea TaxID=7674 RepID=A0A7M7HL57_STRPU)

HSP 1 Score: 164 bits (416), Expect = 8.120e-43
Identity = 83/246 (33.74%), Postives = 134/246 (54.47%), Query Frame = 1 
Query:    1 PRLVAAWANGRLTLLKDDADPSPVTLESGLRIVNATWNPQGTVLAVAGHEDGTP------MVFFLDPYGRRLQKLKVPAKEIRGASWDGGGARLVIAADHFLFFANVRPKYTWTLLSPRPASSSAEXXXXXXXXXXNVLVLSLPVPERQEKCVVFQDVLSGERRVKWVPRVAQVRGAGEHALLVCNGAQASSGSGEEAQASLPGMQMVILCDAIGTPLETKFIDLECVDSALTRTHVVVAFRDSLW 720
            P L   + NGR  +++D+ D +PV +++G+ +V   WN  G+ LAVAG +          +V F +P+G  ++ LKVP   +   SW+GGG R+ +A D +++FAN+RP Y W   +                   + +V S   PER E CVVF D L+ ER VK+V  +  V   G+H +L     +       +   S P   +++LC+ IGTPLE+K+ID+E    A+T+THV+ A +++++
Sbjct:  226 PTLAICYDNGRAQIMRDETDDNPVLIDTGMTVVKVMWNYNGSALAVAGSQKSAQTDKDVNVVQFYNPFGEHMRTLKVPGSGLSAISWEGGGLRIALAVDSYIYFANIRPDYKWGYCA-------------------STVVYSFTKPERVENCVVFWDTLNSERYVKYVKNLLSVTAYGDHCVLATRADETMG----QVDPSDPVQYVLVLCNCIGTPLESKYIDIEPSFVAVTKTHVIAASKEAIY 448
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BLAST of mRNA_M-pyrifera_M_contig92100.21323.1 vs. uniprot
Match: UPI001CF471CB (WD repeat-containing protein 35-like isoform X1 n=3 Tax=Scleractinia TaxID=6125 RepID=UPI001CF471CB)

HSP 1 Score: 164 bits (416), Expect = 8.170e-43
Identity = 87/246 (35.37%), Postives = 139/246 (56.50%), Query Frame = 1 
Query:    1 PRLVAAWANGRLTLLKDDADPSPVTLESGLRIVNATWNPQGTVLAVAGHEDGTP------MVFFLDPYGRRLQKLKVPAKEIRGASWDGGGARLVIAADHFLFFANVRPKYTWTLLSPRPASSSAEXXXXXXXXXXNVLVLSLPVPERQEKCVVFQDVLSGERRVKWVPRVAQVRGAGEHALLVCNGAQASSGSGEEAQASLPGMQMVILCDAIGTPLETKFIDLECVDSALTRTHVVVAFRDSLW 720
            P L   +  GR+ +++ + D +PV +++ + +VN  WN  G VLAVAG +  T       +V F  P+G  L+ LKVP K+I  A W+GGG R+ +A D F++FAN+RP Y W   S                   N +V +   P+RQE CVVF D  +GE+ VK+V  +  +  +GEH +L     +A   SG+          +++LC+AIGTPL++K+I++E +  A+TR+HV+ + R++ +
Sbjct:  254 PCLAVCFDIGRMQIMRHELDENPVLIDTSMTVVNIQWNNCGAVLAVAGTQRVTGQDKDINVVQFYTPFGEHLRTLKVPGKQITEACWEGGGLRIALAVDSFIYFANIRPNYKWGYFS-------------------NTVVYAFNKPDRQEHCVVFWDTKNGEKYVKYVRNLLSITASGEHCVLAT---RADDNSGQH---------VLVLCNAIGTPLDSKYIEIEPLFVAMTRSHVIASSREAFY 468
[Close]
BLAST of mRNA_M-pyrifera_M_contig92100.21323.1 vs. uniprot
Match: A0A8C5T239_9PASS (WD repeat domain 35 n=1 Tax=Malurus cyaneus samueli TaxID=2593467 RepID=A0A8C5T239_9PASS)

HSP 1 Score: 162 bits (410), Expect = 4.180e-42
Identity = 84/246 (34.15%), Postives = 136/246 (55.28%), Query Frame = 1 
Query:    1 PRLVAAWANGRLTLLKDDADPSPVTLESGLRIVNATWNPQGTVLAVAG------HEDGTPMVFFLDPYGRRLQKLKVPAKEIRGASWDGGGARLVIAADHFLFFANVRPKYTWTLLSPRPASSSAEXXXXXXXXXXNVLVLSLPVPERQEKCVVFQDVLSGERRVKWVPRVAQVRGAGEHALLVCNGAQASSGSGEEAQASLPGMQMVILCDAIGTPLETKFIDLECVDSALTRTHVVVAFRDSLW 720
            P L   + NGR  L++D+ D +PV +++G+ +V   WNP G+VLAVAG       +    +V F  P+G  L+ LKVP K++   SW+GGG ++ +A D++++FAN+RP Y W   S                   N +V +   P+R E CVVF D  + E+ VK+V  +  +   G+  +L    A  +    E    S   M +++LC++IGTPL+ K+ID+E +   +T+THV+ A R++ +
Sbjct:  225 PCLAVCYDNGRCQLMRDENDYNPVLIDTGINVVCIQWNPNGSVLAVAGSLREASQDKDIIVVQFYTPFGEHLRTLKVPGKQMSSLSWEGGGLKIALAVDNYIYFANIRPHYKWGYCS-------------------NTVVYAYTRPDRPECCVVFWDTKNNEKYVKYVKSLISITTCGDFCVLATK-ADENQPQEEHETESFGAMYVLVLCNSIGTPLDPKYIDIEPLFVTMTKTHVIAASREAFY 450
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BLAST of mRNA_M-pyrifera_M_contig92100.21323.1 vs. uniprot
Match: UPI000F552EB2 (LOW QUALITY PROTEIN: WD repeat-containing protein 35-like n=2 Tax=Pocilloporidae TaxID=46729 RepID=UPI000F552EB2)

HSP 1 Score: 162 bits (409), Expect = 7.050e-42
Identity = 83/246 (33.74%), Postives = 136/246 (55.28%), Query Frame = 1 
Query:    1 PRLVAAWANGRLTLLKDDADPSPVTLESGLRIVNATWNPQGTVLAVAG------HEDGTPMVFFLDPYGRRLQKLKVPAKEIRGASWDGGGARLVIAADHFLFFANVRPKYTWTLLSPRPASSSAEXXXXXXXXXXNVLVLSLPVPERQEKCVVFQDVLSGERRVKWVPRVAQVRGAGEHALLVCNGAQASSGSGEEAQASLPGMQMVILCDAIGTPLETKFIDLECVDSALTRTHVVVAFRDSLW 720
            P L   +  GR+ +++ + D SP+ +++ + ++N  WN  G+VLAVAG       E    +V F  P+G  L+ LKVP K+I  A ++GGG R+ +A D F++FAN+RP Y W   S                   N +V +   P+RQE CVVF D  +GE+ VK+V  +  +   GEH +L      +S            G  +++LC+AIGTPL++K+I++E +  A+TR+HV+ + +++ +
Sbjct:  234 PCLAVCFDIGRMQIMRHELDESPILIDTSMSVMNIQWNNCGSVLAVAGVQRATGQEKDVNVVQFYTPFGEHLRTLKVPGKQIMQACFEGGGLRIALAVDSFIYFANIRPNYKWGFFS-------------------NTVVYAFNKPDRQEHCVVFWDTKNGEKYVKYVRNLLSITACGEHCVLATRADDSS------------GQHVLVLCNAIGTPLDSKYIEIEPLFVAMTRSHVIASSKEAFY 448
[Close]
BLAST of mRNA_M-pyrifera_M_contig92100.21323.1 vs. uniprot
Match: UPI0004F0D4D9 (WD repeat-containing protein 35 n=1 Tax=Acanthisitta chloris TaxID=57068 RepID=UPI0004F0D4D9)

HSP 1 Score: 159 bits (402), Expect = 4.350e-41
Identity = 82/246 (33.33%), Postives = 135/246 (54.88%), Query Frame = 1 
Query:    1 PRLVAAWANGRLTLLKDDADPSPVTLESGLRIVNATWNPQGTVLAVAGHEDGTP------MVFFLDPYGRRLQKLKVPAKEIRGASWDGGGARLVIAADHFLFFANVRPKYTWTLLSPRPASSSAEXXXXXXXXXXNVLVLSLPVPERQEKCVVFQDVLSGERRVKWVPRVAQVRGAGEHALLVCNGAQASSGSGEEAQASLPGMQMVILCDAIGTPLETKFIDLECVDSALTRTHVVVAFRDSLW 720
            P L   + NGR  +++D+ D +PV +++G+ +V   WNP G+VLAVAG    T       +V F  P+G  L+ LKVP K++   SW+GGG ++ +A D +++FAN+RP Y W   S                   + +V S   P+R E CV+F D  + E+ VK+V  +  +   G+  +L    A  +    E    S   M +++LC++IGTPL+ K+ID+E +   +T+THV+ A +++ +
Sbjct:  217 PCLAVCYDNGRCQIMRDENDHNPVLIDTGMNVVCIQWNPCGSVLAVAGSLKATSQDKDVNIVQFYTPFGEHLRTLKVPGKQLSSLSWEGGGLKIALAVDSYIYFANIRPHYKWGYCS-------------------HTVVYSYTRPDRPECCVIFWDTKNNEKYVKYVKSLISITTCGDFCVLATK-ADENQPQEEHETESFGAMYVLVLCNSIGTPLDPKYIDIEPLFVTMTKTHVIAASKEAFY 442
[Close]
BLAST of mRNA_M-pyrifera_M_contig92100.21323.1 vs. uniprot
Match: A0A814FAX5_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814FAX5_9BILA)

HSP 1 Score: 159 bits (402), Expect = 6.040e-41
Identity = 80/251 (31.87%), Postives = 138/251 (54.98%), Query Frame = 1 
Query:    1 PRLVAAWANGRLTLLKDDADPSPVTLESGLRIVNATWNPQGTVLAVAG----HEDGTPMVFFLDPYGRRLQKLKVPAKEIRGASWDGGGARLVIAADHFLFFANVRPKYTWTLLSPRPASSSAEXXXXXXXXXXNVLVLSLPVPERQEKCVVFQDVLSGERRVKWVPRVAQVRGAGEHALLVCNG------AQASSGSGEEAQASLPGMQ-----MVILCDAIGTPLETKFIDLECVDSALTRTHVVVAFR 708
            P L   + NGR  +++++ D  PV ++  + I+ A WN  G++LA+ G     +    +V F  P+G+ L+ LKVP K++   +W+G G RLVI  D  ++FAN+RP Y W  L+                   N +V S   P + E C++F D+ +GE+ +K++  +  + GAG+H +L+  G       Q+SS +   A+ S P +       ++LC++IGTPLE K+ID + V  +++ TH++V+ +
Sbjct:   60 PALAICYTNGRCQIMRNELDEKPVVIDCQMEIICAQWNHDGSILAIGGVITKDDKEANIVQFYSPWGQHLKTLKVPGKKLASVNWEGNGLRLVITIDSLIYFANLRPTYKWCYLN-------------------NTVVFSFTKPSKNEHCIIFYDIKTGEKNLKFMKNLLSIAGAGDHCILIAQGDESSSMGQSSSANAIAAKLSNPKLTHQVQYAIVLCNSIGTPLEHKYIDFQPVYWSMSNTHILVSSK 291
[Close]
BLAST of mRNA_M-pyrifera_M_contig92100.21323.1 vs. uniprot
Match: UPI001425672C (WD repeat-containing protein 35-like isoform X1 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425672C)

HSP 1 Score: 158 bits (400), Expect = 1.130e-40
Identity = 79/246 (32.11%), Postives = 132/246 (53.66%), Query Frame = 1 
Query:    1 PRLVAAWANGRLTLLKDDADPSPVTLESGLRIVNATWNPQGTVLAVAGHEDGTP------MVFFLDPYGRRLQKLKVPAKEIRGASWDGGGARLVIAADHFLFFANVRPKYTWTLLSPRPASSSAEXXXXXXXXXXNVLVLSLPVPERQEKCVVFQDVLSGERRVKWVPRVAQVRGAGEHALLVCNGAQASSGSGEEAQASLPGMQMVILCDAIGTPLETKFIDLECVDSALTRTHVVVAFRDSLW 720
            P L   + NGR  ++K++ D +PV +++G+ +V   WN  G+ LAVAG +          +V F  P+G  ++ LKVP KE+   SW+GGG R+ +A D F++FAN+RP Y W   S                   + +V +   PER E C+VF D  + ER +K+V  +  V   G+H +L     +      +E         +++LC++IGTPL++K++D+E     LT+TH++   +++L+
Sbjct:  226 PCLAICFDNGRAQIMKNENDENPVLIDTGMTVVAIQWNHAGSALAVAGSQKSAQQDKDINVVQFYTPFGEHMRTLKVPGKEMVSCSWEGGGLRIALAVDSFIYFANIRPDYKWGYCS-------------------DTVVYAFTKPERSEHCLVFWDTKNNERHIKYVRNLISVTAYGDHCVLATKAEETIGNEADELT-----QYVLVLCNSIGTPLDSKYVDIEPQYVTLTKTHIIATSKEALY 447
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92100.21323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8B7XTS6_ACAPL4.290e-4534.96WD repeat-containing protein 35-like n=7 Tax=Aster... [more]
UPI0003F0C3423.720e-4434.96WD repeat-containing protein 35-like isoform X1 n=... [more]
A0A1A8E7S5_9TELE3.630e-4333.74WD repeat domain 35 n=1 Tax=Nothobranchius kadleci... [more]
A0A7M7HL57_STRPU8.120e-4333.74Uncharacterized protein n=4 Tax=Echinacea TaxID=76... [more]
UPI001CF471CB8.170e-4335.37WD repeat-containing protein 35-like isoform X1 n=... [more]
A0A8C5T239_9PASS4.180e-4234.15WD repeat domain 35 n=1 Tax=Malurus cyaneus samuel... [more]
UPI000F552EB27.050e-4233.74LOW QUALITY PROTEIN: WD repeat-containing protein ... [more]
UPI0004F0D4D94.350e-4133.33WD repeat-containing protein 35 n=1 Tax=Acanthisit... [more]
A0A814FAX5_9BILA6.040e-4131.87Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
UPI001425672C1.130e-4032.11WD repeat-containing protein 35-like isoform X1 n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92100contigM-pyrifera_M_contig92100:1..771 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score167.9
Seed ortholog evalue5.7e-39
Seed eggNOG ortholog10224.XP_006813710.1
Preferred nameWDR35
KEGG koko:K19674
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0001678,GO:0001889,GO:0002237,GO:0003008,GO:0003013,GO:0003018,GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0005930,GO:0006810,GO:0006928,GO:0006935,GO:0006996,GO:0007017,GO:0007018,GO:0007275,GO:0008015,GO:0008104,GO:0008150,GO:0008289,GO:0009605,GO:0009607,GO:0009617,GO:0009636,GO:0009743,GO:0009746,GO:0009749,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010821,GO:0010822,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0010970,GO:0015630,GO:0016043,GO:0019222,GO:0019725,GO:0022607,GO:0023051,GO:0023056,GO:0030030,GO:0030031,GO:0030162,GO:0030705,GO:0030990,GO:0030991,GO:0031099,GO:0031100,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031503,GO:0032268,GO:0032270,GO:0032496,GO:0032501,GO:0032502,GO:0032838,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033500,GO:0033993,GO:0034097,GO:0034284,GO:0034612,GO:0034613,GO:0035091,GO:0035150,GO:0035296,GO:0035690,GO:0035721,GO:0035735,GO:0036064,GO:0040011,GO:0042073,GO:0042221,GO:0042330,GO:0042493,GO:0042592,GO:0042593,GO:0042981,GO:0042995,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043280,GO:0043281,GO:0044085,GO:0044093,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045019,GO:0045428,GO:0045862,GO:0046907,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048731,GO:0048732,GO:0048856,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050880,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0051716,GO:0052547,GO:0052548,GO:0055082,GO:0060255,GO:0060271,GO:0061008,GO:0061512,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070887,GO:0070925,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071345,GO:0071356,GO:0071396,GO:0071840,GO:0080090,GO:0090066,GO:0090199,GO:0090200,GO:0097014,GO:0097327,GO:0097421,GO:0097542,GO:0097730,GO:0097746,GO:0097756,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901555,GO:1901700,GO:1901701,GO:1903426,GO:1903427,GO:1904406,GO:1905515,GO:1905705,GO:1990823,GO:1990830,GO:2000116,GO:2000377,GO:2000378,GO:2001056,GO:2001233,GO:2001235
EggNOG free text desc.cellular response to paclitaxel
EggNOG OGs38H4I@33154,3BECP@33208,3CW6G@33213,KOG2041@1,KOG2041@2759
COG Functional cat.E
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons2
Model size720
Cds size720
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816834.1473463-CDS-M-pyrifera_M_contig92100:0..5891622816834.1473463-CDS-M-pyrifera_M_contig92100:0..589Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92100 1..589 +
1692278205.9074442-CDS-M-pyrifera_M_contig92100:0..5891692278205.9074442-CDS-M-pyrifera_M_contig92100:0..589Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92100 1..589 +
1622816834.1605072-CDS-M-pyrifera_M_contig92100:640..7711622816834.1605072-CDS-M-pyrifera_M_contig92100:640..771Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92100 641..771 +
1692278205.9260933-CDS-M-pyrifera_M_contig92100:640..7711692278205.9260933-CDS-M-pyrifera_M_contig92100:640..771Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92100 641..771 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92100.21323.1prot_M-pyrifera_M_contig92100.21323.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92100 1..771 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92100.21323.1

>prot_M-pyrifera_M_contig92100.21323.1 ID=prot_M-pyrifera_M_contig92100.21323.1|Name=mRNA_M-pyrifera_M_contig92100.21323.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=240bp
PRLVAAWANGRLTLLKDDADPSPVTLESGLRIVNATWNPQGTVLAVAGHE
DGTPMVFFLDPYGRRLQKLKVPAKEIRGASWDGGGARLVIAADHFLFFAN
VRPKYTWTLLSPRPASSSAEASPASASTTSNVLVLSLPVPERQEKCVVFQ
DVLSGERRVKWVPRVAQVRGAGEHALLVCNGAQASSGSGEEAQASLPGMQ
MVILCDAIGTPLETKFIDLECVDSALTRTHVVVAFRDSLW
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mRNA from alignment at M-pyrifera_M_contig92100:1..771+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92100.21323.1 ID=mRNA_M-pyrifera_M_contig92100.21323.1|Name=mRNA_M-pyrifera_M_contig92100.21323.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=771bp|location=Sequence derived from alignment at M-pyrifera_M_contig92100:1..771+ (Macrocystis pyrifera P11B4 male)
CCAAGACTTGTAGCGGCATGGGCCAATGGTCGTCTTACTCTCCTCAAAGA
TGACGCAGACCCTTCTCCTGTGACGCTAGAGTCTGGATTGCGCATCGTCA
ATGCGACGTGGAACCCACAAGGCACAGTCTTGGCTGTTGCTGGGCATGAG
GATGGAACACCAATGGTCTTCTTCCTTGATCCCTATGGAAGACGATTGCA
GAAACTGAAGGTGCCAGCAAAGGAGATTCGTGGCGCTTCTTGGGATGGTG
GTGGAGCGAGACTTGTCATTGCTGCGGATCACTTCCTCTTCTTTGCAAAC
GTACGGCCAAAGTACACTTGGACACTGCTATCTCCACGCCCAGCATCATC
CTCTGCTGAAGCATCTCCTGCATCTGCTTCTACAACATCAAATGTCTTGG
TGCTCTCTCTTCCAGTCCCTGAACGTCAAGAAAAGTGTGTGGTGTTTCAA
GACGTTTTGAGTGGAGAGCGGAGGGTGAAGTGGGTACCAAGAGTAGCGCA
AGTGCGTGGTGCAGGTGAACATGCATTGCTTGTTTGCAATGGTGCTCAAG
CCAGTTCTGGAAGTGGAGAGGAAGCACAGGCATCACTGCGTAGTGGTGTG
ACCAGTGGAATTGCATTTGGTGCTGCTGGAACTGCTTCAGCTGGCATGCA
AATGGTAATCCTTTGTGATGCAATTGGAACACCTTTGGAGACAAAGTTCA
TTGATCTGGAATGTGTTGATTCTGCACTCACTCGAACCCATGTAGTTGTT
GCATTTCGTGATTCTCTATGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92100:1..771+

>mRNA_M-pyrifera_M_contig92100.21323.1 ID=mRNA_M-pyrifera_M_contig92100.21323.1|Name=mRNA_M-pyrifera_M_contig92100.21323.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1440bp|location=Sequence derived from alignment at M-pyrifera_M_contig92100:1..771+ (Macrocystis pyrifera P11B4 male)
CCAAGACTTGTAGCGGCATGGGCCAATGGTCGTCTTACTCTCCTCAAAGA
TGACGCAGACCCTTCTCCTGTGACGCTAGAGTCTGGATTGCGCATCGTCA
ATGCGACGTGGAACCCACAAGGCACAGTCTTGGCTGTTGCTGGGCATGAG
GATGGAACACCAATGGTCTTCTTCCTTGATCCCTATGGAAGACGATTGCA
GAAACTGAAGGTGCCAGCAAAGGAGATTCGTGGCGCTTCTTGGGATGGTG
GTGGAGCGAGACTTGTCATTGCTGCGGATCACTTCCTCTTCTTTGCAAAC
GTACGGCCAAAGTACACTTGGACACTGCTATCTCCACGCCCAGCATCATC
CTCTGCTGAAGCATCTCCTGCATCTGCTTCTACAACATCAAATGTCTTGG
TGCTCTCTCTTCCAGTCCCTGAACGTCAAGAAAAGTGTGTGGTGTTTCAA
GACGTTTTGAGTGGAGAGCGGAGGGTGAAGTGGGTACCAAGAGTAGCGCA
AGTGCGTGGTGCAGGTGAACATGCATTGCTTGTTTGCAATGGTGCTCAAG
CCAGTTCTGGAAGTGGAGAGGAAGCACAGGCATCACTGCCCAAGACTTGT
AGCGGCATGGGCCAATGGTCGTCTTACTCTCCTCAAAGATGACGCAGACC
CTTCTCCTGTGACGCTAGAGTCTGGATTGCGCATCGTCAATGCGACGTGG
AACCCACAAGGCACAGTCTTGGCTGTTGCTGGGCATGAGGATGGAACACC
AATGGTCTTCTTCCTTGATCCCTATGGAAGACGATTGCAGAAACTGAAGG
TGCCAGCAAAGGAGATTCGTGGCGCTTCTTGGGATGGTGGTGGAGCGAGA
CTTGTCATTGCTGCGGATCACTTCCTCTTCTTTGCAAACGTACGGCCAAA
GTACACTTGGACACTGCTATCTCCACGCCCAGCATCATCCTCTGCTGAAG
CATCTCCTGCATCTGCTTCTACAACATCAAATGTCTTGGTGCTCTCTCTT
CCAGTCCCTGAACGTCAAGAAAAGTGTGTGGTGTTTCAAGACGTTTTGAG
TGGAGAGCGGAGGGTGAAGTGGGTACCAAGAGTAGCGCAAGTGCGTGGTG
CAGGTGAACATGCATTGCTTGTTTGCAATGGTGCTCAAGCCAGTTCTGGA
AGTGGAGAGGAAGCACAGGCATCACTGCCTGGCATGCAAATGGTAATCCT
TTGTGATGCAATTGGAACACCTTTGGAGACAAAGTTCATTGATCTGGAAT
GTGTTGATTCTGCACTCACTCGAACCCATGTAGTTGTTGCATTTCGTGAT
TCTCTATGGCTGGCATGCAAATGGTAATCCTTTGTGATGCAATTGGAACA
CCTTTGGAGACAAAGTTCATTGATCTGGAATGTGTTGATTCTGCACTCAC
TCGAACCCATGTAGTTGTTGCATTTCGTGATTCTCTATGG
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