mRNA_M-pyrifera_M_contig92078.21316.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92078.21316.1
Unique NamemRNA_M-pyrifera_M_contig92078.21316.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92078.21316.1 vs. uniprot
Match: A0A7C5KJA0_9GAMM (2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5KJA0_9GAMM)

HSP 1 Score: 183 bits (465), Expect = 4.270e-52
Identity = 106/253 (41.90%), Postives = 146/253 (57.71%), Query Frame = 1
Query:    7 DCVVVGAGLVGAAQALALQRLGLTVLVIDTRKPLG-GEPGGDVRGLALAPSSRNILRGLGIWPALAGHVIPIEEVRVSDQGRFGAARLQAHDVGFEALGYVIPADRLMHAFEAALVAAVPVRW--QTTIESIETADRTARVTVRNGDVAETFSTALVIGADGAGSRVRELLGIPIRTRDYRQHAIVVNMNVTGIEPRVAYERFTPHGPIALLPIGHERHVAVRCCAEADIDRLLALDDASYGGELLAGFGARL 756
            D ++VG G+VGA+ A+AL   GL++ ++D   P    +PG D R +ALA  SR I  G+G+WPALA    PI E+ VSD+GRFG   L AH+    ALGYV+ A R+  A +  L     + W     + ++   +  AR+T+  G+ A   + AL++ ADG  S VRE LG+P R  +Y Q AIV N+        VAYERFT  GPIALLP+   R   V    +A +D ++ALDDA++     A FG RL
Sbjct:    8 DLLIVGGGMVGASLAIALSGQGLSIGLVDAHAPGDPAQPGYDDRAIALAWGSRRIFEGMGLWPALAADAEPICEIHVSDRGRFGFTHLSAHEEQVPALGYVLTARRIGEALQERLRQCPDLDWIAPAQVTAVSADETAARITLAEGEAARELNAALLVAADGGRSFVREALGLPTRRWEYGQSAIVANVTPGRAHCNVAYERFTEEGPIALLPMSEGRCALVWTVHDAQVDEVMALDDAAFLARFQARFGHRL 260          
BLAST of mRNA_M-pyrifera_M_contig92078.21316.1 vs. uniprot
Match: A0A2E3MG28_9GAMM (2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MG28_9GAMM)

HSP 1 Score: 166 bits (419), Expect = 2.520e-45
Identity = 98/251 (39.04%), Postives = 139/251 (55.38%), Query Frame = 1
Query:    7 DCVVVGAGLVGAAQALALQRLGLTVLVIDTRKP-LGGEPGGDVRGLALAPSSRNILRGLGIWPALAGHVIPIEEVRVSDQGRFGAARLQAHDVGFEALGYVIPADRLMHAFEAALVAAVPVRW-QTTIESIETADRTARVTVRNGDVAETFSTALVIGADGAGSRVRELLGIPIRTRDYRQHAIVVNMNVTGIEPRVAYERFTPHGPIALLPIGHERHVAVRCCAEADIDRLLALDDASYGGELLAGFGAR 753
            D ++VG GLVG + ALAL++ GL + +++   P +  +PG D R LAL+ +S  +L  LG+W  +A HV P+E + VSD+G FG  RL A D    ALGYVI   RL       L      R+   T+E       T  +T+R      T +T L+IGADGA S +R+ L +  R +DY+Q AIV  ++ +      A+ERFTP GPIALLP+ H+R   +      D   L+AL D  +  ++   FG R
Sbjct:    7 DIIIVGGGLVGVSLALALRQQGLAIAMVEAVPPRVAQQPGFDARTLALSWTSHQVLSALGLWAEIAPHVTPMEHIHVSDKGHFGFTRLHARDYHVPALGYVIEIQRLGKLLYETLEQTDVTRFCPATLEQANRDGNTWELTIRGESGPMTLTTGLLIGADGAQSPLRQQLQLTTREKDYQQSAIVTTVSTSLAHDNTAFERFTPKGPIALLPMTHDRQALIWTLDNGDFAPLMALSDELFLQQVQQSFGYR 257          
BLAST of mRNA_M-pyrifera_M_contig92078.21316.1 vs. uniprot
Match: A0A3D5DE26_9GAMM (FAD_binding_3 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DE26_9GAMM)

HSP 1 Score: 163 bits (413), Expect = 4.210e-45
Identity = 83/190 (43.68%), Postives = 111/190 (58.42%), Query Frame = 1
Query:  184 IWPALAGHVIPIEEVRVSDQGRFGAARLQAHDVGFEALGYVIPADRLMHAFEAALVAAVPVRWQTTIESIETADRTARVTVRNGDVAETFSTALVIGADGAGSRVRELLGIPIRTRDYRQHAIVVNMNVTGIEPRVAYERFTPHGPIALLPIGHERHVAVRCCAEADIDRLLALDDASYGGELLAGFGAR 753
            +W  L+    P+  + VSDQGRFG   L ++D+G +ALGYV PAD  +      L+    V W TT+ SI      A++ + +       +T LVIGADG  SRVRE  G+    RDYRQ AIV N++V    P  A+ERFT +GP+ALLP+   R V VRCC+  ++DR++ L D  Y  EL  GFG R
Sbjct:    1 MWNLLSTQTAPVRHIHVSDQGRFGFTHLNSNDIGIDALGYVCPADHFLRVIRNVLIEKCEVWWGTTLSSINLGSEFAQLWLESASGPVQITTRLVIGADGMNSRVREAAGVVAHMRDYRQSAIVANVDVQYPVPETAFERFTGNGPLALLPLPGGRQVTVRCCSTDEVDRIVGLSDKQYLAELEEGFGHR 190          
BLAST of mRNA_M-pyrifera_M_contig92078.21316.1 vs. uniprot
Match: A0A5B8RF69_9ZZZZ (2-octaprenyl-6-methoxyphenol hydroxylase n=2 Tax=unclassified sequences TaxID=12908 RepID=A0A5B8RF69_9ZZZZ)

HSP 1 Score: 165 bits (417), Expect = 5.080e-45
Identity = 100/256 (39.06%), Postives = 134/256 (52.34%), Query Frame = 1
Query:    1 DVDCVVVGAGLVGAAQALALQRLGLTVLVIDTRKPLGG-EPGGDVRGLALAPSSRNILRGLGIWPALAGHVIPIEEVRVSDQGRFGAARLQAHDVGFEALGYVIPADRLMHAFEAALVAAVPVRWQTTIESIETADRTARVTVRNGDVAETFSTALVIGADGAGSRVRELLGIPIRTRDYRQHAIVVNMNVTGIEPRVAYERFTPHGPIALLPIGHERHVAVRCCAEADIDRLLALDDASYGGELLAGFGARLREL 765
            D D +V G GLVGA+ A AL   GL V VI+   P    +P  D R  ALAPSSR     LG+W  +A    PI  + VS++GRF A R+ A D G +ALG+V P   L      A+  +       T+  +   + T  V V   D   T S  L+  ADG+ S + E LG+P R RDY Q A++ N+ V   +   A+ERFTP GP+A+LP G  R+ AV        + + ALD+A++   L   FG RL  L
Sbjct:    3 DYDLIVAGGGLVGASLAAALHGSGLRVAVIEAAAPGSAMQPSFDERQTALAPSSRRFFEALGLWRDIAAEAAPIRAIHVSERGRFAATRMYAGDEGLDALGHVAPNRVLGRVLRPAMEKSATCYTPATVTGVSAGEDTVHVDVSGADGDTTLSARLLAVADGSASPLCEQLGVPRRNRDYGQTAVIANVGVERGDGGWAFERFTPEGPLAMLPAGQGRYAAVWTLPHERAEAMAALDEATFLDALQRAFGWRLGRL 258          
BLAST of mRNA_M-pyrifera_M_contig92078.21316.1 vs. uniprot
Match: A0A2E0WLN8_9GAMM (2-octaprenyl-6-methoxyphenyl hydroxylase n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E0WLN8_9GAMM)

HSP 1 Score: 163 bits (413), Expect = 2.100e-44
Identity = 107/258 (41.47%), Postives = 139/258 (53.88%), Query Frame = 1
Query:    7 DCVVVGAGLVGAAQALALQRLGLT----VLVIDTRKPLGG--EPGGDVRGLALAPSSRNILRGLGIWPALAGHVIPIEEVRVSDQGRFGAARLQAHDVGFEALGYVIPADRLMHAFEAALVAAVPVRWQTTIE--SIETADRTARVTVRNGDVAETFSTALVIGADGAGSRVRELLGIPIRTRDYRQHAIVVNMNVTGIEPRVAYERFTPHGPIALLPIGHERHVAVRCCAEADIDRLLALDDASYGGELLAGFGARL 756
            D ++VG GLVGA+ A AL   GL     + VI+   P G   +   D R +ALA  SR I  G+G+W  +A    PIE + VSD+GRFG  RL   + G  ALGYV  +  L     A +    P+   T  E  +I+ A  TARV +R    A   +  LV+ ADGA SRVRE LGI     DYRQ A++ N+       +VAYERFT  GP+ALLP+   R   V     A +D ++AL+DA +   L A FG RL
Sbjct:    6 DILIVGGGLVGASLACALAGAGLQPRLRIGVIEAA-PFGSRSQASFDDRAIALAAGSRRIFEGMGLWADIAPATTPIERIHVSDRGRFGFTRLDRREEGVPALGYVALSRELGQVLAARVQQLAPLELITPAEVTAIDNAGTTARVHLRQEGTAVEVTADLVVAADGARSRVREALGIAATEWDYRQTAVITNIRTARAHDQVAYERFTDQGPLALLPMSEGRCSVVWTLPSAQVDEIMALNDAGFLARLQARFGYRL 262          
BLAST of mRNA_M-pyrifera_M_contig92078.21316.1 vs. uniprot
Match: A0A1D8KAP9_9GAMM (FAD_binding_3 domain-containing protein n=1 Tax=Acidihalobacter aeolianus TaxID=2792603 RepID=A0A1D8KAP9_9GAMM)

HSP 1 Score: 163 bits (412), Expect = 2.950e-44
Identity = 107/260 (41.15%), Postives = 143/260 (55.00%), Query Frame = 1
Query:    1 DVDCVVVGAGLVGAAQALALQRLGLTVLVIDTRKPLG--GEPGGDVRGLALAPSSRNILRGLGIWPALAGHVIPIEEVRVSDQGRFGAARLQAHDVGFEALGYVIPADRLMHAFEAALVAAVPVRWQTTIE------SIETADRTARVTVRNGDVAETFSTALVIGADGAGSRVRELLGIPIRTRDYRQHAIVVNMNVTGIEPRVAYERFTPHGPIALLPIGHERHVAVRCCAEADIDRLLALDDASYGGELLAGFGARL 756
            D D +VVG G+VGA+  +AL   G  V +++ R P G  G+P  D R  ALA  SR++L  LG+W  L+    PI  + VSD+GRFGAA + A + G  ALGYV+P   +  A   AL  A  V      E      S    D    + +R G  A T    LVI ADG  S +RE  GI I +R Y Q A++ N++V+      AYERFTP GP+A+LP+G +R+  V    + D+   LALDDA++   L A FG RL
Sbjct:    4 DFDILVVGGGMVGASLGVALAGSGRRVGILEAR-PYGEPGQPSYDDRSTALALGSRHMLERLGVWSDLSREAAPITHIHVSDRGRFGAAHIDAGEQGVPALGYVVPNRAIGAALMGALQDAEGVEMIAPAEVAGFEGSSGNDDEWVSLHLREGQAAGTLRARLVIAADGTASPMRERAGIGIESRPYGQSALIANVSVSRPRAGWAYERFTPDGPLAMLPMGGDRYSLVWTHRDKDLAATLALDDAAFLRSLQARFGWRL 262          
BLAST of mRNA_M-pyrifera_M_contig92078.21316.1 vs. uniprot
Match: A0A433IH38_9GAMM (2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A433IH38_9GAMM)

HSP 1 Score: 162 bits (411), Expect = 4.400e-44
Identity = 107/264 (40.53%), Postives = 149/264 (56.44%), Query Frame = 1
Query:    1 DVDCVVVGAGLVGAAQALALQRLGLTVLVIDTRK-PLGGEPGGDVRGLALAPSSRNILRGLGIWPALAGHVIPIEEVRVSDQGRFGAARLQAHDVGFEALGYVIPADRLMHAFEAALVAAVP------VRWQTTIESIETADRTARVTVRN--GDVAETFSTALVIGADGAGSRVRELLGIPIRTRDYRQHAIVVNMNVTGIEPRVAYERFTPHGPIALLPIGHERHVAVRCCAEADIDRLLALDDASYGGELLAGFGARLREL 765
            D D +++G G+VGA+ A AL  L L + +++     +   PG D R LALA  +R I + LG+WPALA  V PIE + +S++G  G A L  H+ G +ALGYV+PA     A  AAL+A +P      +     +E++  ++  AR T+R+  G   E + T L+I ADGA S VRE LGI     +Y Q A++ N++ T     VAYERFT  GP+A LP+   R   V   AE  +  +LALDDA +   L   FG RL  L
Sbjct:   10 DYDLLIIGGGMVGASLACALDGLDLRIGLVEAAPLTVSAHPGYDDRTLALAQGTRRIFQTLGLWPALAAAVTPIERIHISERGAPGFAHLDCHEEGVDALGYVVPA----RAIGAALLAKLPTLRGVELLCPARLETLHLSNDAARATLRDAAGQRVE-YRTRLLIAADGANSVVREQLGIAALRWEYGQQAVIANVSPTLPHNNVAYERFTSDGPVAFLPMSDNRCAVVCTVAEDAVAPVLALDDAGFLALLEQRFGERLGPL 268          
BLAST of mRNA_M-pyrifera_M_contig92078.21316.1 vs. uniprot
Match: I8T987_9GAMM (FAD_binding_3 domain-containing protein n=1 Tax=Hydrocarboniphaga effusa AP103 TaxID=1172194 RepID=I8T987_9GAMM)

HSP 1 Score: 161 bits (408), Expect = 1.140e-43
Identity = 101/259 (39.00%), Postives = 145/259 (55.98%), Query Frame = 1
Query:    4 VDCVVVGAGLVGAAQALALQRLGLTVLVIDTRKPLGGEPGGDVRGLALAPSSRNILRGLGIWPALAGHVIPIEEVRVSDQGRFGAARLQAHDVGFEALGYVIPADRLMHAFEAAL--VAAVPVRWQTTIESIETADRTARVTVRNGDVAETFSTALVIGADGAGSRVRELLGIPIRTRDYRQHAIVVNMNVTGIEPRVAYERFTPHGPIALLP-----IGHERHVAVRCCAEADIDR-LLALDDASYGGELLAGFGARL 756
            VD  ++G GLVGA+ A+AL  L L V++I+++ P   +P  D R +AL  +S+ I+ GLG+WPAL+    PI    +S++GRFG AR  A + G  ALGY +P   +   F + L  +  + +     ++ ++  D  A +++   D       +LV+ ADGA S VRELLGI   +RDYRQ AIV  +        VAYERF P GPIALLP      GH    ++     +D+ R +LALD+AS+       FG RL
Sbjct:    6 VDVAIIGGGLVGASLAVALAPLKLRVMLIESQSPPASQPSWDERCIALNAASQRIVEGLGLWPALSADAEPITSTHISERGRFGVARFTAEEAGLPALGYNVPLRAIGATFASPLLGIEGLQLLAPARLQRLQLGDSEAVLSITGADGEREVRASLVVAADGARSTVRELLGIGAESRDYRQSAIVTAVRPKRAHAGVAYERFLPTGPIALLPKPDDEFGHA--CSLVWTLPSDLHREVLALDEASFIERAQDAFGERL 262          
BLAST of mRNA_M-pyrifera_M_contig92078.21316.1 vs. uniprot
Match: A0A2G6DLW0_9PROT (2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2G6DLW0_9PROT)

HSP 1 Score: 160 bits (406), Expect = 2.200e-43
Identity = 97/252 (38.49%), Postives = 143/252 (56.75%), Query Frame = 1
Query:    7 DCVVVGAGLVGAAQALALQRLGLTVLVIDTRKPLGG--EPGGDVRGLALAPSSRNILRGLGIWPALAGHVIPIEEVRVSDQGRFGAARLQAHDVGFEALGYVIPADRLMHAFEAAL-VAAVPVRWQTTIESIETADRTARVTVRNGDVAETFSTALVIGADGAGSRVRELLGIPIRTRDYRQHAIVVNMNVTGIEPRVAYERFTPHGPIALLPIGHERHVAVRCCAEADIDRLLALDDASYGGELLAGFGAR 753
            D ++VG G+VGA+ A+ALQ LGL+V +++   P G   +P  D R +AL+  S  I +G+GIW AL   + PI ++ VSDQG FG  RL A      ALGYV+ +  L     A L   +  +     + ++  A    RV +    V +   T L++ ADGA S VR++LG+ +R RDY+Q A++ N++       +AYERFTP+GP+ALLP+   R+  V   A   +  +L +DDAS+   L   FG R
Sbjct:    3 DVLIVGGGMVGASLAVALQPLGLSVAMVEAF-PFGQAEQPAYDDRSIALSYGSSRIYQGMGIWAALRKGLEPIRDIHVSDQGHFGVTRLNAAREKVPALGYVVESRVLGEVLHAVLQTGSTQLLSPARVFALAHASDHVRVKIERNGVVDELQTRLLVVADGAKSPVRKMLGVEVRQRDYQQSAVIANVSTERAHNNLAYERFTPNGPLALLPMTQGRYSLVWTQANDQLQSILQMDDASFLAHLQHAFGFR 253          
BLAST of mRNA_M-pyrifera_M_contig92078.21316.1 vs. uniprot
Match: A0A6H0J095_9GAMM (2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Aquisalimonas sp. 2447 TaxID=2740807 RepID=A0A6H0J095_9GAMM)

HSP 1 Score: 160 bits (406), Expect = 2.240e-43
Identity = 105/256 (41.02%), Postives = 140/256 (54.69%), Query Frame = 1
Query:    1 DVDCVVVGAGLVGAAQALALQRLGLTVLVID-TRKPLGGEPGGDVRGLALAPSSRNILRGLGIWPALAGHVIPIEEVRVSDQGRFGAARLQAHDVGFEALGYVIPADRLMHAFEAALVAAVPVRWQTTIESIETA---DRTARVTVRNGDVAETFSTALVIGADGAGSRVRELLGIPIRTRDYRQHAIVVNMNVTGIEPRVAYERFTPHGPIALLPIGHERHVAVRCCAEADIDRLLALDDASYGGELLAGFGARL 756
             VD V+ G GLVGA+ A+AL R GL+V V+D        +P  D R  ALAP+SR IL  LG+W A+A  + PI  + VSDQG FG  R+ A   G +ALGYV P   L  A   AL   +P   QT  +S+ T    + TARV + +G    + S  L++ ADG  S +RE LG+ +R  DY QH +V N+         A+ERFTP GP+ALLP+       V   A    + L A+ +A++   L   FG RL
Sbjct:    6 SVDVVIAGGGLVGASLAIALARSGLSVHVVDPVTAEAPAQPSYDDRSTALAPTSRRILEALGLWSAIAPEIGPIRRIHVSDQGGFGMTRMDAAREGLDALGYVAPNRVLGRALRGALE-RLPGTVQTVTDSVATVHTDEDTARVELGSG---ASLSARLLVAADGTHSALREHLGLQVRETDYGQHGVVANVTPAREPAGEAFERFTPEGPLALLPLPGGHCSLVWTVAPDHAEALTAMGEAAFLAALQDAFGYRL 257          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92078.21316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C5KJA0_9GAMM4.270e-5241.902-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=G... [more]
A0A2E3MG28_9GAMM2.520e-4539.042-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=L... [more]
A0A3D5DE26_9GAMM4.210e-4543.68FAD_binding_3 domain-containing protein n=1 Tax=Ga... [more]
A0A5B8RF69_9ZZZZ5.080e-4539.062-octaprenyl-6-methoxyphenol hydroxylase n=2 Tax=u... [more]
A0A2E0WLN8_9GAMM2.100e-4441.472-octaprenyl-6-methoxyphenyl hydroxylase n=5 Tax=G... [more]
A0A1D8KAP9_9GAMM2.950e-4441.15FAD_binding_3 domain-containing protein n=1 Tax=Ac... [more]
A0A433IH38_9GAMM4.400e-4440.532-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=C... [more]
I8T987_9GAMM1.140e-4339.00FAD_binding_3 domain-containing protein n=1 Tax=Hy... [more]
A0A2G6DLW0_9PROT2.200e-4338.492-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=P... [more]
A0A6H0J095_9GAMM2.240e-4341.022-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92078contigM-pyrifera_M_contig92078:3..767 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score161.8
Seed ortholog evalue4.3e-37
Seed eggNOG ortholog1122603.ATVI01000005_gene3672
Preferred nameubiH
KEGG rclassRC00046,RC02670
KEGG koko:K03185,ko:K18800
KEGG ReactionR04987,R04989,R08768,R08773
KEGG Pathwayko00130,ko01100,ko01110,map00130,map01100,map01110
KEGG ModuleM00117
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008681,GO:0009058,GO:0009108,GO:0009314,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016705,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0050896,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901576,GO:1901661,GO:1901663
EggNOG free text desc.hydroxylase
EggNOG OGs1MU6I@1224,1RMS3@1236,1X3RQ@135614,COG0654@1,COG0654@2
COG Functional cat.CH
BiGG ReactioniB21_1397.B21_02702,iECBD_1354.ECBD_0830,iECB_1328.ECB_02739,iECD_1391.ECD_02739,iEcHS_1320.EcHS_A3066
Best tax levelXanthomonadales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size765
Cds size765
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816833.7342908-CDS-M-pyrifera_M_contig92078:2..7671622816833.7342908-CDS-M-pyrifera_M_contig92078:2..767Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92078 3..767 +
1692278205.6145713-CDS-M-pyrifera_M_contig92078:2..7671692278205.6145713-CDS-M-pyrifera_M_contig92078:2..767Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92078 3..767 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92078.21316.1prot_M-pyrifera_M_contig92078.21316.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92078 3..767 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92078.21316.1

>prot_M-pyrifera_M_contig92078.21316.1 ID=prot_M-pyrifera_M_contig92078.21316.1|Name=mRNA_M-pyrifera_M_contig92078.21316.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=255bp
DVDCVVVGAGLVGAAQALALQRLGLTVLVIDTRKPLGGEPGGDVRGLALA
PSSRNILRGLGIWPALAGHVIPIEEVRVSDQGRFGAARLQAHDVGFEALG
YVIPADRLMHAFEAALVAAVPVRWQTTIESIETADRTARVTVRNGDVAET
FSTALVIGADGAGSRVRELLGIPIRTRDYRQHAIVVNMNVTGIEPRVAYE
RFTPHGPIALLPIGHERHVAVRCCAEADIDRLLALDDASYGGELLAGFGA
RLREL
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mRNA from alignment at M-pyrifera_M_contig92078:3..767+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92078.21316.1 ID=mRNA_M-pyrifera_M_contig92078.21316.1|Name=mRNA_M-pyrifera_M_contig92078.21316.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=765bp|location=Sequence derived from alignment at M-pyrifera_M_contig92078:3..767+ (Macrocystis pyrifera P11B4 male)
GACGTCGACTGCGTCGTCGTCGGCGCTGGCCTCGTCGGCGCCGCGCAGGC ACTGGCGTTGCAACGACTCGGCCTCACGGTTCTCGTAATTGATACCCGCA AGCCGCTCGGCGGCGAACCCGGCGGTGACGTCCGCGGACTCGCACTGGCG CCGAGTTCGCGCAATATTCTGCGCGGGCTCGGGATCTGGCCGGCCCTCGC CGGGCATGTCATTCCCATCGAGGAAGTGCGCGTAAGCGATCAGGGTCGCT TCGGTGCAGCGCGGCTGCAGGCACACGACGTCGGCTTCGAGGCGCTCGGT TACGTTATTCCGGCCGACCGCCTCATGCACGCGTTCGAAGCGGCGCTCGT CGCGGCGGTGCCGGTACGCTGGCAGACGACGATCGAGAGCATCGAAACCG CGGACCGTACGGCCCGCGTCACCGTGCGCAACGGCGACGTCGCGGAGACG TTCAGCACCGCGCTCGTGATCGGCGCCGATGGCGCCGGGTCGCGGGTACG TGAACTGCTGGGCATCCCAATCCGAACCCGCGATTACCGTCAGCACGCGA TTGTCGTGAACATGAACGTCACGGGGATCGAACCGCGTGTCGCTTACGAG CGCTTTACGCCGCACGGACCGATCGCACTGTTGCCCATCGGGCACGAACG GCATGTTGCCGTGCGCTGTTGTGCCGAGGCCGATATCGATCGTTTGCTCG CGCTCGATGACGCCAGCTATGGGGGAGAACTGCTGGCCGGGTTCGGTGCG CGCTTACGAGAGCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92078:3..767+

>mRNA_M-pyrifera_M_contig92078.21316.1 ID=mRNA_M-pyrifera_M_contig92078.21316.1|Name=mRNA_M-pyrifera_M_contig92078.21316.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1530bp|location=Sequence derived from alignment at M-pyrifera_M_contig92078:3..767+ (Macrocystis pyrifera P11B4 male)
GACGTCGACTGCGTCGTCGTCGGCGCTGGCCTCGTCGGCGCCGCGCAGGC
ACTGGCGTTGCAACGACTCGGCCTCACGGTTCTCGTAATTGATACCCGCA
AGCCGCTCGGCGGCGAACCCGGCGGTGACGTCCGCGGACTCGCACTGGCG
CCGAGTTCGCGCAATATTCTGCGCGGGCTCGGGATCTGGCCGGCCCTCGC
CGGGCATGTCATTCCCATCGAGGAAGTGCGCGTAAGCGATCAGGGTCGCT
TCGGTGCAGCGCGGCTGCAGGCACACGACGTCGGCTTCGAGGCGCTCGGT
TACGTTATTCCGGCCGACCGCCTCATGCACGCGTTCGAAGCGGCGCTCGT
CGCGGCGGTGCCGGTACGCTGGCAGACGACGATCGAGAGCATCGAAACCG
CGGACCGTACGGCCCGCGTCACCGTGCGCAACGGCGACGTCGCGGAGACG
TTCAGCACCGCGCTCGTGATCGGCGCCGATGGCGCCGGGTCGCGGGTACG
TGAACTGCTGGGCATCCCAATCCGAACCCGCGATTACCGTCAGCACGCGA
TTGTCGTGAACATGAACGTCACGGGGATCGAACCGCGTGTCGCTTACGAG
CGCTTTACGCCGCACGGACCGATCGCACTGTTGCCCATCGGGCACGAACG
GCATGTTGCCGTGCGCTGTTGTGCCGAGGCCGATATCGATCGTTTGCTCG
CGCTCGATGACGCCAGCTATGGGGGAGAACTGCTGGCCGGGTTCGGTGCG
CGCTTACGAGAGCTCGACGTCGACTGCGTCGTCGTCGGCGCTGGCCTCGT
CGGCGCCGCGCAGGCACTGGCGTTGCAACGACTCGGCCTCACGGTTCTCG
TAATTGATACCCGCAAGCCGCTCGGCGGCGAACCCGGCGGTGACGTCCGC
GGACTCGCACTGGCGCCGAGTTCGCGCAATATTCTGCGCGGGCTCGGGAT
CTGGCCGGCCCTCGCCGGGCATGTCATTCCCATCGAGGAAGTGCGCGTAA
GCGATCAGGGTCGCTTCGGTGCAGCGCGGCTGCAGGCACACGACGTCGGC
TTCGAGGCGCTCGGTTACGTTATTCCGGCCGACCGCCTCATGCACGCGTT
CGAAGCGGCGCTCGTCGCGGCGGTGCCGGTACGCTGGCAGACGACGATCG
AGAGCATCGAAACCGCGGACCGTACGGCCCGCGTCACCGTGCGCAACGGC
GACGTCGCGGAGACGTTCAGCACCGCGCTCGTGATCGGCGCCGATGGCGC
CGGGTCGCGGGTACGTGAACTGCTGGGCATCCCAATCCGAACCCGCGATT
ACCGTCAGCACGCGATTGTCGTGAACATGAACGTCACGGGGATCGAACCG
CGTGTCGCTTACGAGCGCTTTACGCCGCACGGACCGATCGCACTGTTGCC
CATCGGGCACGAACGGCATGTTGCCGTGCGCTGTTGTGCCGAGGCCGATA
TCGATCGTTTGCTCGCGCTCGATGACGCCAGCTATGGGGGAGAACTGCTG
GCCGGGTTCGGTGCGCGCTTACGAGAGCTC
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