|
Homology
BLAST of mRNA_M-pyrifera_M_contig9202.21305.1 vs. uniprot
Match: D7G0F0_ECTSI (Tau95 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0F0_ECTSI) HSP 1 Score: 243 bits (620), Expect = 3.350e-70 Identity = 168/327 (51.38%), Postives = 199/327 (60.86%), Query Frame = 1
Query: 1 VEHLRKELELKWGSGRGMEDRRSNRPSRSRRGLSGHNEVREQQLTVVLKIIKAFDKRPMYFMRELDKFFLNQAIWPLRDLVPAVAYYYCNGPWRSRWVRFGFRPEDHPSARFDQLLEFRLSSAQLRAWAEAI----TPKTQTKKALSPTTKDAGKGKGDXXXXXXXXXXXXXXXXXXAKGTRGGSGAKRTKAFGKLKTAAGTGAGAAPGRGXXXXXXXXXXXXXXXXXXXAEGDGDGVTPEVKGGIRRSDDDGIAL-----GIGGVGGPPEVGLTSKTKGRFASQVNLNGQMLSARNRQTLAECPIRAVQELALTAPRLVSAPALVT 954
VEHLR EL+ KWGSGR + R NRPSR R+G+SGHNEVREQ+L +V KI+K F+K+PMYFMREL++ +Q WP+RDLVPAVAYYYCNGPWRSRWVRFG+RPEDHPS RF+Q+LEFRL AQLR WA A+ K+ T K L+P + XXXXXXXXXXXXXXXX + GG GA T K+ AE + D G+ L +GGV PEVGLTS+ KGRFASQ+ LNG +LSARNR + E PIR VQELAL APR+ P +VT
Sbjct: 219 VEHLRVELDRKWGSGR--QRGRKNRPSRYRKGISGHNEVREQRLLLVQKIVKLFEKQPMYFMRELEEHMQDQPTWPIRDLVPAVAYYYCNGPWRSRWVRFGYRPEDHPSDRFEQILEFRLFPAQLRVWAAALEQAGVKKSSTPKVLAPVVATSSPAAKTAAXXXXXXXXXXXXXXXXVR--EGGRGASVTAPVAKV--------------------------------VEAEMEEXXXXXXXXXXXXXKKDAGLTLTSQRLSVGGV--VPEVGLTSRPKGRFASQLVLNGNILSARNRHVVGESPIREVQELALKAPRM-DRPGIVT 506
BLAST of mRNA_M-pyrifera_M_contig9202.21305.1 vs. uniprot
Match: A0A6H5KH63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH63_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 3.280e-10 Identity = 38/59 (64.41%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 754 LGIGGVGGPPEVGLTSKTKGRFASQVNLNGQMLSARNRQTLAECPIRAVQELALTAPRL 930
L +GG+ PEVGL S+ KGRFASQ+ LNG +LSARNR + E PIR VQELAL APR+
Sbjct: 300 LSVGGI--VPEVGLASRPKGRFASQLLLNGNVLSARNRHVVGESPIREVQELALKAPRM 356
BLAST of mRNA_M-pyrifera_M_contig9202.21305.1 vs. uniprot
Match: UPI0018D014E1 (general transcription factor 3C polypeptide 5 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D014E1) HSP 1 Score: 69.7 bits (169), Expect = 1.360e-9 Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 154 KAFDKRPMYFMRELDKFFLNQAIWPLRDLVPAVAYYYCNGPWRSRWVRFGFRPEDHPSARFDQLLEFRLSSA 369
K FD+RP++ M L F L+ L+PAVA+Y +GPWR+ WVRFG+ P P+ARF Q L+FR+ +A
Sbjct: 244 KKFDERPIWSMNALT-FHTKIKKQNLKMLIPAVAFYMFDGPWRALWVRFGYDPRKEPAARFYQTLDFRVGTA 314
BLAST of mRNA_M-pyrifera_M_contig9202.21305.1 vs. uniprot
Match: A0A240PMP5_9DIPT (General transcription factor 3C polypeptide 5 (transcription factor C subunit n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A240PMP5_9DIPT) HSP 1 Score: 68.6 bits (166), Expect = 3.470e-9 Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 148 IIKAFDKRPMYF---MRELDKFFLNQAIWPLRDLVPAVAYYYCNGPWRSRWVRFGFRPEDHPSARFDQLLEFRLSSA 369
I AF+ RP++ +R + +F ++ + + L+PAVAY+Y NGPWRS WVRFG+ P H AR Q+L+FR+ S+
Sbjct: 233 IRSAFEARPIWTKHALRNMKQFNVSNDM--MGTLLPAVAYFYVNGPWRSTWVRFGYDPRKHFEARMYQMLDFRVRSS 307
BLAST of mRNA_M-pyrifera_M_contig9202.21305.1 vs. uniprot
Match: A0A8K0KPC3_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KPC3_LADFU) HSP 1 Score: 68.2 bits (165), Expect = 5.090e-9 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 142 LKIIKAFDKRPMYF---MRELDKFFLNQAIWPLRDLVPAVAYYYCNGPWRSRWVRFGFRPEDHPSARFDQLLEFRL 360
L+I K ++RP++ + L K +Q L+ L+PAV+YY+ NGPWR W RFG+ P HPSAR Q L+FRL
Sbjct: 315 LRIQKYLEERPVWSKNALLALTKLTADQ----LKYLLPAVSYYFLNGPWRGTWARFGYDPTKHPSARLYQTLDFRL 386
BLAST of mRNA_M-pyrifera_M_contig9202.21305.1 vs. uniprot
Match: E0VNE6_PEDHC (Uncharacterized protein n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0VNE6_PEDHC) HSP 1 Score: 65.1 bits (157), Expect = 4.600e-8 Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 142 LKIIKA-FDKRPMYF---MRELDKFFLNQAIWPLRDLVPAVAYYYCNGPWRSRWVRFGFRPEDHPSARFDQLLEFRLSS 366
L+++K F +RP+Y +R + K L Q L+ L+P VAYY+ NGPWRS WVRFG+ P P +R Q L++R+ S
Sbjct: 215 LQLLKQLFQERPIYSKSAIRSISKVPLIQ----LKCLLPCVAYYFINGPWRSLWVRFGYDPRKDPKSRIYQTLDYRVRS 289
BLAST of mRNA_M-pyrifera_M_contig9202.21305.1 vs. uniprot
Match: UPI00083C4A4D (general transcription factor 3C polypeptide 5 n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C4A4D) HSP 1 Score: 64.7 bits (156), Expect = 6.970e-8 Identity = 28/75 (37.33%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 145 KIIKAFDKRPMYFMRELDKFFLNQAIWPLRDLVPAVAYYYCNGPWRSRWVRFGFRPEDHPSARFDQLLEFRLSSA 369
K+ + F++RP++ R+ + + L+ ++P VAYYY NGPWR W+RFG+ P+ P+A+ Q L+ R+ S+
Sbjct: 254 KLKELFEERPIW-SRQALLYDTGFTVEQLKHILPKVAYYYLNGPWRVMWIRFGYNPKKDPNAKIYQTLDIRIRSS 327
BLAST of mRNA_M-pyrifera_M_contig9202.21305.1 vs. uniprot
Match: UPI001D065B6C (general transcription factor 3C polypeptide 5 n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D065B6C) HSP 1 Score: 64.3 bits (155), Expect = 8.850e-8 Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 1
Query: 193 LDKFFLNQAIWP--------------LRDLVPAVAYYYCNGPWRSRWVRFGFRPEDHPSARFDQLLEFRL 360
L K F + IWP + ++PAVAYY+ NGPWR+ WVR+G+ P PS+R Q L+FR+
Sbjct: 266 LKKLFEERPIWPRNGILARTGFTNDHCKHILPAVAYYFVNGPWRTMWVRYGYNPRKEPSSRIYQTLDFRV 335
BLAST of mRNA_M-pyrifera_M_contig9202.21305.1 vs. uniprot
Match: A0A1S4H0Q3_ANOGA (General transcription factor 3C polypeptide 5 (transcription factor C subunit n=2 Tax=gambiae species complex TaxID=44542 RepID=A0A1S4H0Q3_ANOGA) HSP 1 Score: 63.2 bits (152), Expect = 1.810e-7 Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 139 VLKIIKAFDKRPMYFMREL---DKFFLNQAIWPLRDLVPAVAYYYCNGPWRSRWVRFGFRPEDHPSARFDQLLEFRLSS 366
V K+ AF RP++ L ++ +N L ++P+VA+YY NGPWR WVR+G+ P H AR QLL+FR+ S
Sbjct: 230 VEKVRAAFKARPIWTKNALVNINRLVINSQTLGL--ILPSVAFYYVNGPWRGTWVRYGYDPRKHFEARVYQLLDFRVRS 306
BLAST of mRNA_M-pyrifera_M_contig9202.21305.1 vs. uniprot
Match: Q7PSE7_ANOGA (AGAP009321-PA n=7 Tax=Pyretophorus TaxID=44537 RepID=Q7PSE7_ANOGA) HSP 1 Score: 63.2 bits (152), Expect = 2.050e-7 Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 139 VLKIIKAFDKRPMYFMREL---DKFFLNQAIWPLRDLVPAVAYYYCNGPWRSRWVRFGFRPEDHPSARFDQLLEFRLSS 366
V K+ AF RP++ L ++ +N L ++P+VA+YY NGPWR WVR+G+ P H AR QLL+FR+ S
Sbjct: 230 VEKVRAAFKARPIWTKNALVNINRLVINSQTLGL--ILPSVAFYYVNGPWRGTWVRYGYDPRKHFEARVYQLLDFRVRS 306
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 246.9 |
Seed ortholog evalue | 1.3e-62 |
Seed eggNOG ortholog | 2880.D7G0F0 |
Preferred name | TFC1 |
KEGG ko | ko:K07560,ko:K15202 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000127,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0006139,GO:0006351,GO:0006352,GO:0006383,GO:0006384,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009303,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0018130,GO:0019438,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042791,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044798,GO:0046483,GO:0071704,GO:0090304,GO:0090576,GO:0097659,GO:0098781,GO:1901360,GO:1901362,GO:1901576 |
EggNOG free text desc. | 5S class rRNA transcription by RNA polymerase III |
EggNOG OGs | KOG2473@1,KOG2473@2759 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko01000,ko03016,ko03021 |
Exons | 5 |
Model size | 978 |
Cds size | 978 |
Stop | 1 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816833.2840512-CDS-M-pyrifera_M_contig9202:83..197 | 1622816833.2840512-CDS-M-pyrifera_M_contig9202:83..197 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9202 84..197 + |
1692278205.3764696-CDS-M-pyrifera_M_contig9202:83..197 | 1692278205.3764696-CDS-M-pyrifera_M_contig9202:83..197 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9202 84..197 + |
1622816833.2981727-CDS-M-pyrifera_M_contig9202:3322..3429 | 1622816833.2981727-CDS-M-pyrifera_M_contig9202:3322..3429 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9202 3323..3429 + |
1692278205.3877885-CDS-M-pyrifera_M_contig9202:3322..3429 | 1692278205.3877885-CDS-M-pyrifera_M_contig9202:3322..3429 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9202 3323..3429 + |
1622816833.3111074-CDS-M-pyrifera_M_contig9202:7865..7976 | 1622816833.3111074-CDS-M-pyrifera_M_contig9202:7865..7976 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9202 7866..7976 + |
1692278205.397687-CDS-M-pyrifera_M_contig9202:7865..7976 | 1692278205.397687-CDS-M-pyrifera_M_contig9202:7865..7976 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9202 7866..7976 + |
1622816833.325169-CDS-M-pyrifera_M_contig9202:8477..8973 | 1622816833.325169-CDS-M-pyrifera_M_contig9202:8477..8973 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9202 8478..8973 + |
1692278205.414421-CDS-M-pyrifera_M_contig9202:8477..8973 | 1692278205.414421-CDS-M-pyrifera_M_contig9202:8477..8973 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9202 8478..8973 + |
1622816833.3426907-CDS-M-pyrifera_M_contig9202:10075..10225 | 1622816833.3426907-CDS-M-pyrifera_M_contig9202:10075..10225 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9202 10076..10225 + |
1692278205.4245987-CDS-M-pyrifera_M_contig9202:10075..10225 | 1692278205.4245987-CDS-M-pyrifera_M_contig9202:10075..10225 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9202 10076..10225 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9202.21305.1 >prot_M-pyrifera_M_contig9202.21305.1 ID=prot_M-pyrifera_M_contig9202.21305.1|Name=mRNA_M-pyrifera_M_contig9202.21305.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=326bp
VEHLRKELELKWGSGRGMEDRRSNRPSRSRRGLSGHNEVREQQLTVVLKI IKAFDKRPMYFMRELDKFFLNQAIWPLRDLVPAVAYYYCNGPWRSRWVRF GFRPEDHPSARFDQLLEFRLSSAQLRAWAEAITPKTQTKKALSPTTKDAG KGKGDDDNGGGGGGGGGGGGGGGAKGTRGGSGAKRTKAFGKLKTAAGTGA GAAPGRGGVETGGGDGEGGCGDGRGGAEGDGDGVTPEVKGGIRRSDDDGI ALGIGGVGGPPEVGLTSKTKGRFASQVNLNGQMLSARNRQTLAECPIRAV QELALTAPRLVSAPALVTYLVVFYR* back to topmRNA from alignment at M-pyrifera_M_contig9202:84..10225+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig9202.21305.1 ID=mRNA_M-pyrifera_M_contig9202.21305.1|Name=mRNA_M-pyrifera_M_contig9202.21305.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10142bp|location=Sequence derived from alignment at M-pyrifera_M_contig9202:84..10225+ (Macrocystis pyrifera P11B4 male) GTGGAACACCTTCGGAAGGAGTTGGAATTGAAGTGGGGAAGCGGGAGAGG
GATGGAGGACAGGAGAAGTAACCGCCCCTCACGCAGTAGGCGAGGCCTTT
CTGGTCACAACGAGGTACGATAGATCGTACGATGTGGTGCTGATATGTTA
GGTACGATACTATTGCGGGGGACCGTGCTGTAGTAAATAGGACCAAATAT
TGTTCGCAAAAAAAGGGAAATATGTAGATTTTTTGTGTGTACCGTACGTC
CTATTTGCTGTGGTCCCCCATAATAGTGGGACTTCGCCGTGGCGGGCTGA
CGCCCGCCTGCGCCTTCGCGCATGAGTGCAGTGGCGATGAGAAGAGTATT
CATAGGTGAGCCGAACCCGCACTAAAGCAACCGAGGGTATGCGGTAACGT
ACGCGCATACGTGCATTCGAAATAAGGAAGATTGACGGTAAGTACTGCTG
TATTGAAGAACACCTCGGCTGGCGTCGCGAGGTATCACGAAAAAATGTCT
CAAAAACTAGGCCCATCAACGAGCCGAGGCTCGCTCACGGCGAAGCACCA
ACAATACTCGCATCGTCTCTGCACTTATTGACGGTATGTACTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCATTGTGAACAC
CGTGGGGGGCAGGTGGCAGGTGTATAACGACGAACGGCGGCAGCAGCAAC
AACAACAGCAACATAATCTCTGAACACACAGCGGCATATTCAGATACCTA
AAATCATGAATACGTACATGGTATACACGTATTTGCAGTACAGAGTAGGC
ATACTCGTACGTAGAATACGACTGCCGGTACTGCTGTAGGCTCGTACGAC
ACCAACAGCAGCAGCAAGCGTCGGTATCATGCTATTACGGGGGACCATAG
TAAATAGGACCCAACGGCACATACAAAAACCTATATATTTCCCTATTTTC
ACTAACAATATTTGGTCCTATTTATTATGGTCCCCCGTAATATACGACGC
ACACACACCAAATATACCATGATACTGGCTGGTACTGCTGTATGAACTGC
TGGGGTAATGATTCGTATATACGGGTATCAGTAGTATGTGTCATGGCCCT
CAAGCACCGAGTGTCGTCGATGTAAAAAAACGGAATATTGGATCTCGCGT
ATAGGTCATGCGAGAACTATAAATTATTAATACAGCAGTATGAGCCCGAG
TACGTACTTGTATACAGTTCGGAACAAAAACAAGAAAAAAAACTAATGGC
GAGCGCTCCCGATCACCACATTGTTGACGGGAAATTGCAGCGTCCACCGC
CCGCGTTTTCACAGCACGAGCGCACGTGAGGCCCTGCCCGGCGCGAAGCA
GGCCGGCGGGCACGCTCGCGCGTGAATCGACCGAAAACGTCTCACCGCCT
AGCGAGGAAACGTCCCGACATGCGTGCTCATGTGTAGAACGCGAGGTTCC
AAGAGGTAACTGTCCCGCACGTGACTTGTCAAAGAACATGTACGATGGCG
AGCTTGTGATAAGGGCACGAAGTTCTGAAGAATACGCACGCCCGCAAGAC
ACGGCTCGGGCACGGCCGAGGTCGCCCTTGGAAGGGCGGACAGGATGGGG
GTCGGCGAGCACGATGAGGGAGTTTCGGACCGAGAGGTGCACCTCGTGAC
GAGGTATCGCAAAAACGGCTCGAAATTTCGCCTGAGAAATGCGGAGACTC
GCTCGCGGCGAAGCACCAACAATACCCTACATGTATATATATATATGTTT
GTGCTGTGATATGACATCATGTAATTCGATGCTATTTGTTACACTGTGTT
ATGATGCAGCATGATGTTATATAGTTTGGTAGTGTTACAATATATAACGC
GTAGTTTTAGATCGGGAAGAACTGCTACGACTGTCTCCGCGAAGGAGGCG
ACGTCCGGGTCGCCTCTGGCAAACACCTCGTGGCATCCTGCGTTAAGCCC
TGGCACGTACGGTGTGCGCCGAGGCGTCGCCGGGAGATGGTGGAAACCAC
CAACCTGGAATCCCACCGGTGCGCCGCCTCCAACAGTGCGGAAGATGAAC
AGGAGCGACAGCCGCAGCTCTATGTACACCTGCAAAGCCCCTCCACGAGG
GGCCTAGCCGGGGGCGAGCTATTTGACCTTTCGTAGTCTTCAAGGCGACA
TATTGTCGCTCAGAACATTGAACATCGAATTCAGAATAAAGAGCTCAGAA
CACATTGCTTGGAACACTCAGCGTTGCGCGAGTGAGTTACGCGAGACGTA
CCTGTACGGAGAATGGACGGGGATTGAGCGAGCACGCGAGAAGTATCCGA
GAAGTGTCTCTACAGATAATACAAAGGAATCGCCGTAAGTCACACTACAG
AGGCTTGAGAGGACGTTTGGGTCGAAAAGGGGTTGAACAATGGAGGCATT
CATTAATGATATAATTTTGCTTCGCTGGCTGGTTCCGCTCGCTTGCTTGA
TTTCTTGATGGCTTGCTTTGCTTGCTTTGCGTGCTTGATCGCTTGCTTTG
CTTGCTTTGCTTGCTTTGCTTGCTTTGCTTGCTTTGCTTGCTTTGCTTGT
TTGGTTGCTTTGCTTGCTTGCTTGGCTTGCTTGCTTGCTTGCTTGCGTGC
TTGCGTGCTTGGCTTGCTTTGCGCGCTTTGCTTGCTTGGTTTGGTTGCTT
GCGTTTGCTGGCTTGCTTGCCTTGCTTGCCTTGCTTGCTTGCTTGCCTTG
CTTGCTTGCCCGCTAGCTTGCTTGATCTCCCCCCCGGACAGACAATCGAT
TCCCACAGTTCATGATCTAGATCTGTTAAGACAGTTCTGTTCCCGACAGT
AGCTATTACGGGGGACCATAGTAAATAGGACCAAATATTGTTAAAAAAAA
TAGTTAAATATATAGTTTTTTGTGTGTACCGTAGGTCCTATTTACTGTGG
TCCCCCGTAAATAGCTCATGTTGCCGAGTGTGACCCGTACAATCCGCAAT
CTATTACCGGGGACCATAGTAAATGGGACCAAATTTTGTTGGTAAAAATA
GGTAAATATATAGGTTTTTGTGTGTACCGTAGGTCCTATTTACTATGGCC
TTCCGTGATAGCACATGCTTCCTGGGTCGGATGTGCCCTGTATGGCAGAT
AGATCCTGCACAACCTTTCATAACGGCAGGTGAGGAACTGCTAGATGATC
TACAGATAGATAGATCAGATAGGTCATGATCTGTTCGAGGTGTGCTTGAT
TCATGCTTGTCGCGCCATGAACCGTGCGCCGTTGGTAAGGTGAGGGAGCA
GCAGCTGACCGTAGTCCTGAAGATCATCAAGGCCTTCGACAAGCGGCCGA
TGTACTTCATGCGGGAGCTGGACAAGTTCTTTCTCAACCAGGCCATGTGA
GTTTTTTTTAAAGCAGTTCGCGCATCCTCTCGGGCCCGTAAACTTAGCTG
GGCTCTTCGCTGGTCATGACCCGGCCCGCCGGTCAGTTTCGGGTAGGATG
TGTTCGAAATATCACGGGCCGGCTCAGGTCAGGAGGTTTTAAAGTCTCTC
GGGTATGTTCTCCATATTTTTTTTCTACCGTAATTGTTTCTGTTTTTTTT
TTTTCCCCCTGCCAGACCGTTCGAGGCCGCCCTGCCCCTTTTGAGTTCAC
AGACTATTTCTGACTTGCGGAGGGATGCACTAACGCGAGAAAACAACAAC
AGCGACAACACTGACACCAATAACGAAACTAACACCAACACCCCCACCTG
CACCACCACCACCACCACCACCACCACCACCACCACCAACAACAACAACG
ACAACAACGCACGAAAAAAAGCAACACTCTTCTTCTGCTCACCCTTTGCC
AGCCCCCCCCCAACTACAGCAGATACAGCAACGCGCAGCTTGAGGTATGG
AAACCCATCGGACAAACTTTAGTAAAAACTCAGTGGGTCATCGAAACGCC
TCCTCTACTCTCTGCTCGCGACTAGCTTGCGACCGTGCGCCTTACGCGCG
CGCGCCGGCATGCAGTCGAAGACAAACGGTAGCGCACGCACGCGCGGTCC
TCGGTTGCAAGGTTAAACAATCACTGCGCGACAATAGTTGGTGGAGACGA
CCGCCGAAAAGAAACATCGACAAGAGAAGGTACCACGTCCCCGGTTGCAA
GGTTCATTCACTGCGCGACGAATAGTTGGTGGAGACGACCGCCGAAAAGA
AACATCGACAAGAGAAGGTACCACGTGCCTGGAAGTCTTGAGATTTTAGA
GGTCGGTGTGGGTCGTCCTGTCGTCCCTGCCGCTGTCGGAGGTGGTGCAT
TTATGGCGGTGCCTTGTCGACATGCGCGGGCCCTCCCCGGGGAGGAAGTT
CCGCGCGAGCCGACAAGGGACCCCATGGATTCACCAACCTCCGCCGGCGA
ACAGGACGACAGCACCGACGACGAAGTCGAAAAGTTTGAGACTTCCAGGC
AAGTGGTACCTTGCTCTCATCGAAGGTTACCGAAAACGATCCGCCGAAAA
AAAACAAGATTTTAACCGGTCGGACAAGAAGAACCAAAAGCGTCCAGCCG
ACGACGCCACGTGTGGCAGTCTAAGGCGGTAGGGGCCTACTAGGGACCGA
CTTGTGCCATGAACGCAGGGGTTCCCCCCCGGCTCTGCTCAGGTCGCTGC
CACGAGGTGCTTGACGGACTCTTGGAATTTTTTGGCTTAAGAGTAATATT
AATAGTTGCTTGGTTGCTTGCTTTCTTGCTTGCTTGCTTGCGTGCTTGCT
TGCTTGCTCGCTCGCTCGCCGCGTGTGTTCTGGACCAAGGGGTGAGATGA
TCCTCGTCCAGGCAGGTGATAACGCCTGCCAGGTATGATGAGGGGACTCT
TGCCACTTATGATGACGCCGCTGGAGGGGGAGAGGGGACGCCATACCAGT
GTACAATGCTTGATGTTGATAACATTTTTGACCCGTCGATAGTACGAAAC
AACCACCAAAGAGGAAGAGGCATGAAAAGGACGACAACTACCGTCCACCA
TGTGCCAACGCACACAAGTTGACGACAGCACGCATCGTTGCACGTTTGTG
CTCGAAGTTGGCTTTGCTATGCCCCCCCCCCCCCCCCTATATGTTATATA
TACTGTAGGTGGGGTTGGCGTCGGTTGGCATCGACGCTGTAAAACTTGCC
GCTCACTGCTCGTAACGTGAGCGAGACAACCAGGGCATCCCTTGTTGATT
TTGTTTCGTTTTTTGTGGCGGTCGGTCACAGCCGGCGATCGACGACCGTA
GCATGCGCCGTTGCCTCTAGCTCTACTTCCAGATCCAAGACGCATTCTCA
GGGTTGACATCGCTCGCCGACTCTGCAGAAATTCGGTGGGCTTGCGTCGC
CTCGGTGTTGTTCCCGTCAAATGATACGAATACGATGGCCCAGTTGAACT
GCCAAGAATACAGTTTGTTGTTTAGGGGGGAAGGTCGAAGGAGCAGGCGG
TGACCCGACCCAATTATCCGACCCGGCCCGGCCCGGCCCGACCCGACCCG
ACCCGACCCGACCCGACCCGACCCGACCCGGCTCAACCCAACCCGACCCG
ACGCGACCCACGACGTTTGACATGACCCGTGAGCACCCCTGGCATTTTGG
CAGGTGCAGGCGTATCCTATATAGGCTGCATCTCTCCATACTGGCAGAAT
GTGTCAACCATGCGCCCTCGCGTGGTCGGTGTCGTTGGATAGATGTAACG
GTTTCACACCTCGATGATCTACTGCAGTTTGCTCACCTACAGCTGTGAGA
GGTTTTGCGGTTTCGCACGCAGGATATGCGTAGTGAAAAAGATCCAACCC
GGGGGAAGAAAAAATGTGCTTTTTGACACACATCTGCTGCAGACTATTCG
GGCCCCCACCCGGCGACATGAGCTTACAGCAGATGAGCGGGATTGATCTA
TATCTGCTTTGAAGTATCTATAGATCATGAAGTGGAAATCGACGTTTAAG
CTTTGTTTATTACGGATCCGCCGGTGGATAAAAAAAAAGATATCTGTCGG
AGGTGTGAACGGTATCTTTTTTCGATCTATCAGCGTGGACCGATCTGGAT
GGAAGTATAGGGACCGTTTGGTATTCATGTTGATTTTTGAAAATCTCACT
CGTATTTCCGCCCACAAAGCGGTTTACGATTTGGCAAACCACCAAACATC
TTAAGACTATCTTTGAGGTAGTTCGAGGATCCGAAAGCGAATGGCAGCCG
TTGAAGTTTCCTTTTAAAATGGGAGCTATTTTGTTGATGCAACGGCGTCC
CCGGAGGCTCGGTAGGTGGTCCGCGTGCCTGCTAATATCAATTTCCTGGG
TTCAAATCTCACCGGGTGCATACTCGTGGGGACTTTTTCTTGCACAAAAA
TTGGTTTTGCGGAAAGCGCGAGAGCGTGAGTTAGCAGCTTTCGATGAAAA
TCGACGAGCAGTGGCAATGCTGAACCCTATCCCTGTTCGCGGTCAAAATT
GAAGGCATGAGCAGAAGGGATGACACCTGTGATCAAGGCTTAATGTCCAG
AAGGTCGCTGAGGGTAAAAAGCTCGTTCGAGTTGAGCTGGAAAGTAGAAG
TGATGATTAAAAAATTACAATGAAAAACAATGCGAACGGTAGCCATCGAA
CTACGGCATCCTCTAAGGTAGGCTTACAAGGATCATTGCTATTGAAGAAC
GTTTCTCGTGGTTTTCCTCTTGTCTTGTTCTTGGAAAAAAAAAGAGAGAA
AAAGAAGAAAAAAAAAAGAAGAAAATGTTCCCTAGAACAATAAGAAATTT
AACAGAGAGCGAATAAAATGAACTAAAAACAGAAACGCTTGGATTTCCTC
TTTTGGGAAAAAAATCAGGAGAACCAGAAAAAGTAAAAAACTATAAAACA
GGGAAAAATCAGGAAATCAGGAAATTTAGAACGAAACGCTCCTGGTTACT
AACGGCCCCTAGTAGGGTATATACTCCGGGGGTATCCGGGTATTTACCAA
ACCCTGGACAATAGCCTATTAAATACGCCTATTGGTCTGCCAATAGGTTG
AGGTATTGTACATCAATACTTTATGCCCCCTGCAATAGGATGGTATGCAG
TCTGGGGGTACCCGGTACCGACCAATACAGCCGGGTCTGGTACCCCGGTA
CCTACCCGAATATGACAAAAACAACCGGGTTCGGTACCCGGGTACCTAAT
CGAGTATGGCCAAAACAACCGGATCCGGTACCCGGGTACCTACCCGAGTA
TGACAAAACACACCCGGATTTGGTACCCGGGGACCTACCCGAGTATGAAA
AAAAACAACCGGATTTGGTACCCAGGTACCTACCCGAGTATGACGAAAAC
AGCCGGGATTGGGACCCGGGTACCTACCCGAGTGTGGCCAAAACAACCGG
GTTCGGTACCCGGGTACCTACCCGAGTATGGCCAAAACAACCGGGTTTTG
GTACTCCCGGGTACGCCCAAGGGTATACGCCCTACTCCGAAACCCACCCT
TGGAGCTAGCTATCCAACCATTGGACTATTGTAGGGGCCGACTGATCGTT
TCAACCATTCAGCGATCCGCCCCCCGGAAAAAGATCTAACAAAAGAGAGG
TCGGAGGAGGTGTCTCTGTTGGGAGTAGGAACGATGCTCTGTCTCCAAAG
GGATGCGTTCATGGTGGAAGACCAAGGCAAACAAAAAATGAGTACACGCC
CCCCCCCCCTCTCTCTTTTTCCCTACCCTTCCCTCTCCCTATCCCTCCCC
ACCAACCCCCTCTCCCTCCCTTCCCCCCTCACCCCCCCCCCTCCCCCCCG
CCCCCGCCCCCCTCTACCTCCCTCCTTCCCTCCCTCCCTTTTTCCGTCCC
TCCCCCCTTTCGTCCCCCCTCCTTCCATGAAGATGGCCCCTTCGCGACCT
AGTTCCAGCTGTCGCGTACTACTACTGTAATGGCCCTTGGCGAAGCCGCT
GGGTCAGATTCGGGTTTCGCCCTGAGGATCACCCGTCCGCCAGGTAATTG
ATTGGTTGATTGGTTGATTAATGGACTGCTTGGTTGACTGGGTGTGCGTC
TGATTGGTTTTTTAATGTTTATTGGCTTGATTACTGGCTTGGTTGATGGA
TCGGTCGGTCGTTCGTTGGTTCTGGTTGATTTCAATACATGACTAGATAG
TGGATGGTTTCGGCCATATAGCCCAACAACCATTTGTCAAAACTCCGGAA
AACCAAAATCAGATCCATTCGAAGCTATCATCCCATGACAAGTCCAAGCC
CCACAACCGGTTCCTCGGCAGGACGCAGCTCAACCTTCATGCGACTCGCT
TAATGCGCCACGACGCTTCGCGCTTGCTTCGCGCTCGGTGCAGGCAATGT
CTACCTGGTCGATGAAAGACCCGACATGCTCCATCCCGGCATCGAGATGC
GAGGATCTATGGCTATGCGACTACGGCCATGCATGACATGAGTGCCCCTC
TTCCCCCCCCCCCCCCCTCCTACCCCTCCCTCCCCCCTCCTCAGATTCGA
CCAGCTGCTGGAGTTTCGGCTTTCCTCCGCGCAGCTCAGGGCGTGGGCCG
AGGCTATCACGCCGAAGACGCAGACCAAGAAAGCACTCTCGCCCACCACG
AAAGACGCTGGCAAAGGCAAAGGCGACGATGACAACGGTGGTGGTGGTGG
TGGTGGTGGAGGCGGTGGTGGTGGTGGGGGCGCAAAGGGCACCCGAGGGG
GAAGCGGAGCGAAGCGGACGAAAGCCTTCGGGAAGTTGAAGACGGCGGCT
GGGACTGGTGCCGGTGCTGCCCCGGGGAGGGGAGGCGTGGAGACGGGGGG
AGGGGATGGAGAAGGGGGGTGTGGGGATGGGAGGGGTGGCGCCGAGGGAG
ATGGCGACGGGGTGACGCCGGAGGTGAAGGGGGGAATTAGGAGATCGGAT
GATGACGGGATAGCCCTGGGGATTGGGGGGGTCGGGGGGCCGCCGGAGGT
CGGATTGACGTCCAAGACCAAGGGGAGGTTCGCCAGCCAGGTGAGCGGGC
GCGGATGATGATGCGATGGTCGGATGAGGAGTGTAGATATGCAAGAGGGT
TGAGCTTTTGCAGAGGGATGCGATCGTTTTTTTTTTTGCCGCTGATTTTT
TTCTCGTCAACGGTAAGGGTGTTCAAAAGGTCGTCGAACATTGTTTATCG
GAAAGGTTCTCGACCAGATCTTAACAGTTTTTGCTGCTGGGTATTGGGAA
CGGTCCGAGCGCTGAAAAACGATGGCACTCGTCTGCGAACTCAACGCTCT
CATTAACGGTACTGTGGTCGAATGTTAAGTGTGTAGCGGTTGAATAATGT
CGAATGGTTGACTAATGTGAACAGTAATATTTCTGTAGGCCACGCGATGG
GATGATGGAACGGTGTGTATGTGTTGGATTCAGTGTGTTGCGGTTGGTTG
CCGCCGTGCGTGCATGGTCGAGTGACGTGCAATGATTCACAAGCGAGACC
AATCACGACCTAGTGTGTGCCGGGTATGAGCTACCGTAGATCACGTAGAT
CCTAGTTTTTTCCGTTGCGATATATATATATATATACGTTAGGGAGAAAT
AAGAGCCGCACTTGAAAGTATATTACAGATCGCACCCGGCGTAAGCGTCC
GCAAGAGAGCCGCGAACAGAAGGTCGACGTTACAGGCGATGTGATATACA
CCAGGATCTCTTTTCCCCGTAATAATCAGGGTTGTTCACGGGTCAGGTCA
GACCTCGCGGGTCATATCCTACCCTACCTTACCCTCCTACCCTACCCTAC
CCTTCCCTACCCTACGCTACGCTACCCTACCCTACCCTACCCTGCTCTAC
CCTACCCTACCCTACCCTACCCTACCCTACCCTACCCTGCTCTACCCTAC
CCTACCCTACCCTACCTTACCCTCCTATCCTACCCTACCCTTCCCTACCC
TACCCTTCCCTAACCCTGACCCTACCCTACCCTACCCTACCCTACCCTAC
TCTACCCTACCCTAACCCTAACCCCACCCTACCCTACCCTACTCTACCTA
CTACCCTACTCTACTTAATACCCTAGCCTGCCCTACCCTAAGCTACGCTG
ACCTGCCACACCTACCCTCCCACGTGTCCCTCGATTGTTTAGGTGAACTT
GAACGGGCAGATGCTTTCGGCGAGAAACCGCCAGACGTTGGCAGAGTGTC
CCATTCGCGCAGTCCAAGAGCTGGCCCTCACGGCACCCCGCTTGGTGAGT
GCACCCGCCCTCGTTACGTACCTGGTAGTGTTTTATCGTTAG back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig9202:84..10225+ >mRNA_M-pyrifera_M_contig9202.21305.1 ID=mRNA_M-pyrifera_M_contig9202.21305.1|Name=mRNA_M-pyrifera_M_contig9202.21305.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1956bp|location=Sequence derived from alignment at M-pyrifera_M_contig9202:84..10225+ (Macrocystis pyrifera P11B4 male) GTGGAACACCTTCGGAAGGAGTTGGAATTGAAGTGGGGAAGCGGGAGAGG GATGGAGGACAGGAGAAGTAACCGCCCCTCACGCAGTAGGCGAGGCCTTT CTGGTCACAACGAGGTGGAACACCTTCGGAAGGAGTTGGAATTGAAGTGG GGAAGCGGGAGAGGGATGGAGGACAGGAGAAGTAACCGCCCCTCACGCAG TAGGCGAGGCCTTTCTGGTCACAACGAGGTGAGGGAGCAGCAGCTGACCG TAGTCCTGAAGATCATCAAGGCCTTCGACAAGCGGCCGATGTACTTCATG CGGGAGCTGGACAAGTTCTTTCTCAACCAGGCCATGTGAGGGAGCAGCAG CTGACCGTAGTCCTGAAGATCATCAAGGCCTTCGACAAGCGGCCGATGTA CTTCATGCGGGAGCTGGACAAGTTCTTTCTCAACCAGGCCATATGGCCCC TTCGCGACCTAGTTCCAGCTGTCGCGTACTACTACTGTAATGGCCCTTGG CGAAGCCGCTGGGTCAGATTCGGGTTTCGCCCTGAGGATCACCCGTCCGC CAGATGGCCCCTTCGCGACCTAGTTCCAGCTGTCGCGTACTACTACTGTA ATGGCCCTTGGCGAAGCCGCTGGGTCAGATTCGGGTTTCGCCCTGAGGAT CACCCGTCCGCCAGATTCGACCAGCTGCTGGAGTTTCGGCTTTCCTCCGC GCAGCTCAGGGCGTGGGCCGAGGCTATCACGCCGAAGACGCAGACCAAGA AAGCACTCTCGCCCACCACGAAAGACGCTGGCAAAGGCAAAGGCGACGAT GACAACGGTGGTGGTGGTGGTGGTGGTGGAGGCGGTGGTGGTGGTGGGGG CGCAAAGGGCACCCGAGGGGGAAGCGGAGCGAAGCGGACGAAAGCCTTCG GGAAGTTGAAGACGGCGGCTGGGACTGGTGCCGGTGCTGCCCCGGGGAGG GGAGGCGTGGAGACGGGGGGAGGGGATGGAGAAGGGGGGTGTGGGGATGG GAGGGGTGGCGCCGAGGGAGATGGCGACGGGGTGACGCCGGAGGTGAAGG GGGGAATTAGGAGATCGGATGATGACGGGATAGCCCTGGGGATTGGGGGG GTCGGGGGGCCGCCGGAGGTCGGATTGACGTCCAAGACCAAGGGGAGGTT CGCCAGCCAGATTCGACCAGCTGCTGGAGTTTCGGCTTTCCTCCGCGCAG CTCAGGGCGTGGGCCGAGGCTATCACGCCGAAGACGCAGACCAAGAAAGC ACTCTCGCCCACCACGAAAGACGCTGGCAAAGGCAAAGGCGACGATGACA ACGGTGGTGGTGGTGGTGGTGGTGGAGGCGGTGGTGGTGGTGGGGGCGCA AAGGGCACCCGAGGGGGAAGCGGAGCGAAGCGGACGAAAGCCTTCGGGAA GTTGAAGACGGCGGCTGGGACTGGTGCCGGTGCTGCCCCGGGGAGGGGAG GCGTGGAGACGGGGGGAGGGGATGGAGAAGGGGGGTGTGGGGATGGGAGG GGTGGCGCCGAGGGAGATGGCGACGGGGTGACGCCGGAGGTGAAGGGGGG AATTAGGAGATCGGATGATGACGGGATAGCCCTGGGGATTGGGGGGGTCG GGGGGCCGCCGGAGGTCGGATTGACGTCCAAGACCAAGGGGAGGTTCGCC AGCCAGGTGAACTTGAACGGGCAGATGCTTTCGGCGAGAAACCGCCAGAC GTTGGCAGAGTGTCCCATTCGCGCAGTCCAAGAGCTGGCCCTCACGGCAC CCCGCTTGGTGAGTGCACCCGCCCTCGTTACGTACCTGGTAGTGTTTTAT CGTTAGGTGAACTTGAACGGGCAGATGCTTTCGGCGAGAAACCGCCAGAC GTTGGCAGAGTGTCCCATTCGCGCAGTCCAAGAGCTGGCCCTCACGGCAC CCCGCTTGGTGAGTGCACCCGCCCTCGTTACGTACCTGGTAGTGTTTTAT CGTTAG back to top
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