mRNA_M-pyrifera_M_contig92014.21303.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92014.21303.1
Unique NamemRNA_M-pyrifera_M_contig92014.21303.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92014.21303.1 vs. uniprot
Match: A0A7S1C375_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C375_9STRA)

HSP 1 Score: 323 bits (828), Expect = 8.250e-103
Identity = 165/256 (64.45%), Postives = 211/256 (82.42%), Query Frame = 1
Query:    1 RDRSEAVTRVLVLLPTRELASQCVAVLQMLSRYTPVRHALVIGGLSLAAQEAELRTRPDVVVATPGRLVDLLRNSRAVDLDDLEILVLDEADRLLDMGFREEVSEVLRQCPVRRQTLLFSATLQGSVAELARVSLERPVRISADPLFDVSKRLVQEFVRVRSGNQKDREAVLLSLVGRTFRRGVLVFCGRKAQAHRLAILLGLRGVRAGELHGSLPQRQRLEALEAFRTGAVDALVATDVAARGLDIAGVQAVVNF 768
            RD+  A  R +V+ PTRELASQ  ++L+ L++YT VR  LV+GGLS+ AQEAELRTRPDVV+ TPGR++D LRNS +V LDD++ILV+DEADRLL++GF EEV EV++ CP  RQTL+FSAT+   V +LA++SL+RPVR+SADPL+D+S+RLVQEF+RVR   + DREA+++SLV R+F++G +VF  RK +AHR AILLGL GV  GELHG+L QRQRLEALEAFRTG +D LVATD+A RGLDI GV+ V+NF
Sbjct:  133 RDKRIAAIRCVVMSPTRELASQTWSMLKELNKYTDVRSCLVVGGLSVKAQEAELRTRPDVVICTPGRMIDHLRNSMSVHLDDVDILVMDEADRLLELGFTEEVEEVVKACPKGRQTLMFSATMTDDVDKLAKMSLKRPVRVSADPLYDLSQRLVQEFIRVRDDREDDREAIMVSLVTRSFKKGTIVFFQRKKRAHRAAILLGLAGVNVGELHGNLTQRQRLEALEAFRTGTIDVLVATDLAGRGLDIDGVKFVINF 388          
BLAST of mRNA_M-pyrifera_M_contig92014.21303.1 vs. uniprot
Match: D0N9A9_PHYIT (DEAD/DEAH box RNA helicase, putative n=9 Tax=Phytophthora TaxID=4783 RepID=D0N9A9_PHYIT)

HSP 1 Score: 307 bits (787), Expect = 2.090e-96
Identity = 152/256 (59.38%), Postives = 201/256 (78.52%), Query Frame = 1
Query:    1 RDRSEAVTRVLVLLPTRELASQCVAVLQMLSRYTPVRHALVIGGLSLAAQEAELRTRPDVVVATPGRLVDLLRNSRAVDLDDLEILVLDEADRLLDMGFREEVSEVLRQCPVRRQTLLFSATLQGSVAELARVSLERPVRISADPLFDVSKRLVQEFVRVRSGNQKDREAVLLSLVGRTFRRGVLVFCGRKAQAHRLAILLGLRGVRAGELHGSLPQRQRLEALEAFRTGAVDALVATDVAARGLDIAGVQAVVNF 768
            R R    TRV+++ P RELA+QC ++L+ L+R+T +  +L +GGL L AQEAELR RPDVVV TPGR++D LRNS++V +DDLEILVLDEADRLL++GF EEV E++R CPV+RQT+LFSAT+   V +L  +S++RPVRIS DPLFD++K LVQEFVR+R   + DREA+LL+L  RTFR   +VF   K+ AHR+ I+ GL G++A ELHG+L QR+RLEAL+ FR G VD L+ TD+AARG+D+ GV AV+N+
Sbjct:  196 RSRRVQSTRVMIICPVRELATQCQSMLEQLARFTDITCSLAVGGLPLKAQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEADRLLELGFTEEVLELVRMCPVQRQTMLFSATMTSKVDQLIDLSMKRPVRISTDPLFDMAKHLVQEFVRIRPNREDDREAILLALCTRTFRSNTIVFMETKSHAHRMMIIFGLAGIKAAELHGNLQQRERLEALQKFRDGTVDVLLCTDIAARGIDVRGVHAVINY 451          
BLAST of mRNA_M-pyrifera_M_contig92014.21303.1 vs. uniprot
Match: M4BEJ4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEJ4_HYAAE)

HSP 1 Score: 303 bits (775), Expect = 4.160e-96
Identity = 150/256 (58.59%), Postives = 199/256 (77.73%), Query Frame = 1
Query:    1 RDRSEAVTRVLVLLPTRELASQCVAVLQMLSRYTPVRHALVIGGLSLAAQEAELRTRPDVVVATPGRLVDLLRNSRAVDLDDLEILVLDEADRLLDMGFREEVSEVLRQCPVRRQTLLFSATLQGSVAELARVSLERPVRISADPLFDVSKRLVQEFVRVRSGNQKDREAVLLSLVGRTFRRGVLVFCGRKAQAHRLAILLGLRGVRAGELHGSLPQRQRLEALEAFRTGAVDALVATDVAARGLDIAGVQAVVNF 768
            R R    TRV+++ P RELA+QC ++ + L+R+T +  +L +GGL L  QEAELR RPDVVV TPGR++D LRNS++V +DDLEILVLDEADRLL++GF +EV E++R CPV+RQT+LFSAT+   V +L  +S++RPVRIS DPLFD++K LVQEFVR+R   + DREA+LL+L  RTFR   +VF   K+ AHR+ I+ GL G++A ELHG+L QR RLEAL+ FR GAVD L+ TD+AARG+D+ GV AV+N+
Sbjct:   54 RSRRVQSTRVMIICPVRELATQCQSMFEQLARFTDITISLAVGGLPLKVQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEADRLLELGFTDEVLELVRMCPVQRQTMLFSATMTSKVDQLIGLSMKRPVRISTDPLFDMAKHLVQEFVRIRPNREDDREAILLALCTRTFRTNTIVFMETKSHAHRMMIIFGLAGIKAAELHGNLLQRDRLEALQKFRDGAVDILLCTDIAARGIDVRGVHAVINY 309          
BLAST of mRNA_M-pyrifera_M_contig92014.21303.1 vs. uniprot
Match: H3GVG1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GVG1_PHYRM)

HSP 1 Score: 308 bits (788), Expect = 1.080e-95
Identity = 153/256 (59.77%), Postives = 200/256 (78.12%), Query Frame = 1
Query:    1 RDRSEAVTRVLVLLPTRELASQCVAVLQMLSRYTPVRHALVIGGLSLAAQEAELRTRPDVVVATPGRLVDLLRNSRAVDLDDLEILVLDEADRLLDMGFREEVSEVLRQCPVRRQTLLFSATLQGSVAELARVSLERPVRISADPLFDVSKRLVQEFVRVRSGNQKDREAVLLSLVGRTFRRGVLVFCGRKAQAHRLAILLGLRGVRAGELHGSLPQRQRLEALEAFRTGAVDALVATDVAARGLDIAGVQAVVNF 768
            R R    TRV+++ P RELA+QC ++ + L+RYT +  +L +GGL L AQEAELR RPDVVV TPGR++D LRNS++V +DDLEILVLDEADRLL++GF EEV E++R CPV+RQT+LFSATL   V +L  +S++RPVRIS DPLFD++K LVQEFVR+R   + DREA+LL+L  RTFR   +VF   K+ AHR+ I+ GL G++A ELHG+L QR RLEAL+ FR G+VD L+ TD+AARG+D+ GV AV+N+
Sbjct:  302 RSRRVQSTRVMIICPVRELATQCQSMFEQLARYTDITCSLAVGGLPLKAQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEADRLLELGFTEEVLELVRMCPVQRQTMLFSATLTSKVDQLIDLSMKRPVRISTDPLFDMAKHLVQEFVRIRPNREDDREAILLALCTRTFRTNTIVFMETKSHAHRMMIIFGLAGIKAAELHGNLQQRDRLEALQKFRDGSVDVLLCTDIAARGIDVRGVHAVINY 557          
BLAST of mRNA_M-pyrifera_M_contig92014.21303.1 vs. uniprot
Match: A0A0W8DL80_PHYNI (DEAD-box ATP-dependent RNA helicase 28 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DL80_PHYNI)

HSP 1 Score: 307 bits (786), Expect = 1.930e-95
Identity = 152/256 (59.38%), Postives = 201/256 (78.52%), Query Frame = 1
Query:    1 RDRSEAVTRVLVLLPTRELASQCVAVLQMLSRYTPVRHALVIGGLSLAAQEAELRTRPDVVVATPGRLVDLLRNSRAVDLDDLEILVLDEADRLLDMGFREEVSEVLRQCPVRRQTLLFSATLQGSVAELARVSLERPVRISADPLFDVSKRLVQEFVRVRSGNQKDREAVLLSLVGRTFRRGVLVFCGRKAQAHRLAILLGLRGVRAGELHGSLPQRQRLEALEAFRTGAVDALVATDVAARGLDIAGVQAVVNF 768
            R R    TRV+++ P RELA+QC ++L+ L+R+T +  +L +GGL L AQEAELR RPDVVV TPGR++D LRNS++V +DDLEILVLDEADRLL++GF EEV E++R CPV+RQT+LFSAT+   V +L  +S++RPVRIS DPLFD++K LVQEFVR+R   + DREA+LL+L  RTFR   +VF   K+ AHR+ I+ GL G++A ELHG+L QR+RLEAL+ FR G VD L+ TD+AARG+D+ GV AV+N+
Sbjct:  288 RSRRVQSTRVMIICPVRELATQCQSMLEQLARFTDITCSLAVGGLPLKAQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEADRLLELGFTEEVLELVRMCPVQRQTMLFSATMTSKVDQLIDLSMKRPVRISTDPLFDMAKHLVQEFVRIRPNREDDREAILLALCTRTFRSNTIVFMETKSHAHRMMIIFGLAGIKAAELHGNLQQRERLEALQKFRDGTVDILLCTDIAARGIDVRGVHAVINY 543          
BLAST of mRNA_M-pyrifera_M_contig92014.21303.1 vs. uniprot
Match: A0A3M6VKN0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKN0_9STRA)

HSP 1 Score: 306 bits (784), Expect = 4.100e-95
Identity = 151/256 (58.98%), Postives = 200/256 (78.12%), Query Frame = 1
Query:    1 RDRSEAVTRVLVLLPTRELASQCVAVLQMLSRYTPVRHALVIGGLSLAAQEAELRTRPDVVVATPGRLVDLLRNSRAVDLDDLEILVLDEADRLLDMGFREEVSEVLRQCPVRRQTLLFSATLQGSVAELARVSLERPVRISADPLFDVSKRLVQEFVRVRSGNQKDREAVLLSLVGRTFRRGVLVFCGRKAQAHRLAILLGLRGVRAGELHGSLPQRQRLEALEAFRTGAVDALVATDVAARGLDIAGVQAVVNF 768
            R R    TRV+++ P RELA+QC ++ + L+R+T +  +L +GGL L AQEAELR RPDVVV TPGR++D LRNS++V +DDLEILVLDEADRLL++GF EEV E++R CPV+RQT+LFSAT+   V +L  +S++RPVRIS DPLFD++K LVQEFVR+R   + DREA+LL+L  RTFR   +VF   K+ AHR+ I+ GL G++A ELHG+L QR+RLEAL+ FR G VD L+ TD+AARG+D+ GV AV+N+
Sbjct:  293 RSRRVQSTRVMIICPVRELATQCQSMFEQLARFTDITISLAVGGLPLKAQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEADRLLELGFTEEVLELVRMCPVQRQTMLFSATMTSKVDQLINLSMKRPVRISTDPLFDMAKHLVQEFVRIRPNREDDREAILLALCTRTFRTNTIVFMETKSHAHRMMIIFGLAGIKAAELHGNLMQRERLEALQKFRDGTVDVLLCTDIAARGIDVRGVHAVINY 548          
BLAST of mRNA_M-pyrifera_M_contig92014.21303.1 vs. uniprot
Match: A0A5D6YUS1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YUS1_9STRA)

HSP 1 Score: 307 bits (786), Expect = 4.700e-95
Identity = 155/256 (60.55%), Postives = 199/256 (77.73%), Query Frame = 1
Query:    1 RDRSEAVTRVLVLLPTRELASQCVAVLQMLSRYTPVRHALVIGGLSLAAQEAELRTRPDVVVATPGRLVDLLRNSRAVDLDDLEILVLDEADRLLDMGFREEVSEVLRQCPVRRQTLLFSATLQGSVAELARVSLERPVRISADPLFDVSKRLVQEFVRVRSGNQKDREAVLLSLVGRTFRRGVLVFCGRKAQAHRLAILLGLRGVRAGELHGSLPQRQRLEALEAFRTGAVDALVATDVAARGLDIAGVQAVVNF 768
            R R    TRVL++ P RELA+QC ++L+ LSR+T V  AL +GGL L AQEAELR  PDVV+ TPGR++D LRNSR++ +DDLEILVLDEADRLL++GF EEV E++R CPV RQT+LFSATL   V +L  +S++RPVRIS DPLFD++K LVQEFVR+R   + DREA+LL+L  RTFR   +VF   K  AHR+ I+ GL G++A ELHG+L Q++RLEAL+ FR G+VD L+ TDVAARG+D+ GV AV+N+
Sbjct:  325 RSRRVQSTRVLIICPVRELATQCQSMLEQLSRFTDVTSALAVGGLPLKAQEAELRQCPDVVICTPGRMIDHLRNSRSIHMDDLEILVLDEADRLLELGFAEEVGELVRLCPVARQTMLFSATLTSKVDQLVSLSMKRPVRISTDPLFDMAKHLVQEFVRIRPQREDDREAILLALCTRTFRTNTIVFMETKVHAHRMMIVFGLAGIKAAELHGNLQQKERLEALQHFRDGSVDVLLCTDVAARGIDVQGVHAVINY 580          
BLAST of mRNA_M-pyrifera_M_contig92014.21303.1 vs. uniprot
Match: A0A3R7G8J8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G8J8_9STRA)

HSP 1 Score: 306 bits (783), Expect = 6.940e-95
Identity = 152/256 (59.38%), Postives = 201/256 (78.52%), Query Frame = 1
Query:    1 RDRSEAVTRVLVLLPTRELASQCVAVLQMLSRYTPVRHALVIGGLSLAAQEAELRTRPDVVVATPGRLVDLLRNSRAVDLDDLEILVLDEADRLLDMGFREEVSEVLRQCPVRRQTLLFSATLQGSVAELARVSLERPVRISADPLFDVSKRLVQEFVRVRSGNQKDREAVLLSLVGRTFRRGVLVFCGRKAQAHRLAILLGLRGVRAGELHGSLPQRQRLEALEAFRTGAVDALVATDVAARGLDIAGVQAVVNF 768
            R R    TRV+++ P RELA+QC ++ + L+R+T +  +L +GGL L AQEAELR RPDVVV TPGR++D LRNS++V +DDLEILVLDEADRLL++GF EEV E++R CPV+RQT+LFSATL   V +L  +S++RPVRIS DPLFD++K LVQEFVR+R   + DREA+LL+L  RTFR   +VF   K+ AHR+ I+ GL G++A ELHG+L QR+RLEAL+ FR G+VD L+ TD+AARG+D+ GV AV+N+
Sbjct:  301 RSRRVQSTRVMIICPVRELATQCQSMFEQLARFTDITCSLAVGGLPLKAQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEADRLLELGFTEEVLELVRMCPVQRQTMLFSATLTSKVDQLIDLSMKRPVRISTDPLFDMAKHLVQEFVRIRPNREDDREAILLALCTRTFRTNTIVFMETKSHAHRMMIIFGLAGIKAAELHGNLLQRERLEALQNFRDGSVDVLLCTDIAARGIDVRGVHAVINY 556          
BLAST of mRNA_M-pyrifera_M_contig92014.21303.1 vs. uniprot
Match: A0A7S0PX81_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PX81_9EUKA)

HSP 1 Score: 303 bits (776), Expect = 9.240e-95
Identity = 155/256 (60.55%), Postives = 202/256 (78.91%), Query Frame = 1
Query:    1 RDRSEAVTRVLVLLPTRELASQCVAVLQMLSRYTPVRHALVIGGLSLAAQEAELRTRPDVVVATPGRLVDLLRNSRAVDLDDLEILVLDEADRLLDMGFREEVSEVLRQCPVRRQTLLFSATLQGSVAELARVSLERPVRISADPLFDVSKRLVQEFVRVRSGNQKDREAVLLSLVGRTFRRGVLVFCGRKAQAHRLAILLGLRGVRAGELHGSLPQRQRLEALEAFRTGAVDALVATDVAARGLDIAGVQAVVNF 768
            R R  A TRVLVL PTRELA+QCV + + L++++ VR +L++GGLS + QE ELR+RPDVVVATPGRL+DLLRNS ++ LDD+EILVLDEADRLL++GF++EV EV++ CP  RQTLLFSAT+   V+ELA  SL +P+++  DP+F+V+++L QEFVR+++G + +REAVLLSLV RT R   +VF   K  AHR+ +L GL  +R  ELHG+L Q+QR EALEAFR G VD LVATD+A RGLDI GV+ V+NF
Sbjct:  229 RPRRIAATRVLVLAPTRELAAQCVTMGERLAKHSDVRFSLIVGGLSSSVQEVELRSRPDVVVATPGRLIDLLRNSASIGLDDVEILVLDEADRLLELGFKDEVDEVVKSCPASRQTLLFSATISEGVSELAGASLNKPMQVKVDPVFNVAEKLAQEFVRIKAGKEHEREAVLLSLVTRTVRERAIVFTSSKKHAHRVRLLFGLFSLRVAELHGNLTQQQRGEALEAFRLGEVDFLVATDLAGRGLDIPGVRTVINF 484          
BLAST of mRNA_M-pyrifera_M_contig92014.21303.1 vs. uniprot
Match: K3X2S7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2S7_GLOUD)

HSP 1 Score: 306 bits (783), Expect = 9.330e-95
Identity = 153/256 (59.77%), Postives = 197/256 (76.95%), Query Frame = 1
Query:    1 RDRSEAVTRVLVLLPTRELASQCVAVLQMLSRYTPVRHALVIGGLSLAAQEAELRTRPDVVVATPGRLVDLLRNSRAVDLDDLEILVLDEADRLLDMGFREEVSEVLRQCPVRRQTLLFSATLQGSVAELARVSLERPVRISADPLFDVSKRLVQEFVRVRSGNQKDREAVLLSLVGRTFRRGVLVFCGRKAQAHRLAILLGLRGVRAGELHGSLPQRQRLEALEAFRTGAVDALVATDVAARGLDIAGVQAVVNF 768
            R R    TRVL++ P RELA+QC ++L+ LSR+T +  AL +GGL L AQE ELR RPDVV+ TPGR++D LRNS+++ +DDLEILVLDEADRLL++GF EEV E++R CPV RQT+LFSATL   V +L  +S++RPVRIS DPLFD++K LVQEFVR+R   + DREA+LL+L  RTFR   +VF   K  AHR+ I+ GL G++A ELHG+L Q+ RLEAL+ FR G VD L+ TDVAARG+D+ GV AV+N+
Sbjct:  318 RSRRVQSTRVLIICPVRELATQCQSMLEQLSRFTDITCALAVGGLPLKAQEVELRNRPDVVICTPGRMIDHLRNSKSIHMDDLEILVLDEADRLLELGFTEEVLELVRMCPVARQTMLFSATLTSKVDQLISLSMKRPVRISTDPLFDMAKHLVQEFVRIRPNREDDREAILLALCTRTFRTNTIVFMETKVHAHRMMIIFGLAGIKAAELHGNLQQKDRLEALQNFRDGTVDILLCTDVAARGIDVKGVHAVINY 573          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92014.21303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1C375_9STRA8.250e-10364.45Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
D0N9A9_PHYIT2.090e-9659.38DEAD/DEAH box RNA helicase, putative n=9 Tax=Phyto... [more]
M4BEJ4_HYAAE4.160e-9658.59Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
H3GVG1_PHYRM1.080e-9559.77Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0W8DL80_PHYNI1.930e-9559.38DEAD-box ATP-dependent RNA helicase 28 n=12 Tax=Ph... [more]
A0A3M6VKN0_9STRA4.100e-9558.98Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A5D6YUS1_9STRA4.700e-9560.55Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3R7G8J8_9STRA6.940e-9559.38Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A7S0PX81_9EUKA9.240e-9560.55Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
K3X2S7_GLOUD9.330e-9559.77Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92014contigM-pyrifera_M_contig92014:3..770 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score309.3
Seed ortholog evalue1.7e-81
Seed eggNOG ortholog164328.Phyra81320
Preferred nameDDX27
KEGG koko:K13181
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0010501,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0035639,GO:0035690,GO:0036094,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0070013,GO:0070035,GO:0070887,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.helicase superfamily c-terminal domain
EggNOG OGs3QB1W@4776,COG0513@1,KOG0338@2759
EC3.6.4.13
COG Functional cat.A
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03041
Exons1
Model size768
Cds size768
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816833.217814-CDS-M-pyrifera_M_contig92014:2..7701622816833.217814-CDS-M-pyrifera_M_contig92014:2..770Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92014 3..770 -
1692278205.337826-CDS-M-pyrifera_M_contig92014:2..7701692278205.337826-CDS-M-pyrifera_M_contig92014:2..770Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92014 3..770 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92014.21303.1prot_M-pyrifera_M_contig92014.21303.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92014 3..770 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92014.21303.1

>prot_M-pyrifera_M_contig92014.21303.1 ID=prot_M-pyrifera_M_contig92014.21303.1|Name=mRNA_M-pyrifera_M_contig92014.21303.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp
RDRSEAVTRVLVLLPTRELASQCVAVLQMLSRYTPVRHALVIGGLSLAAQ
EAELRTRPDVVVATPGRLVDLLRNSRAVDLDDLEILVLDEADRLLDMGFR
EEVSEVLRQCPVRRQTLLFSATLQGSVAELARVSLERPVRISADPLFDVS
KRLVQEFVRVRSGNQKDREAVLLSLVGRTFRRGVLVFCGRKAQAHRLAIL
LGLRGVRAGELHGSLPQRQRLEALEAFRTGAVDALVATDVAARGLDIAGV
QAVVNF
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mRNA from alignment at M-pyrifera_M_contig92014:3..770-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92014.21303.1 ID=mRNA_M-pyrifera_M_contig92014.21303.1|Name=mRNA_M-pyrifera_M_contig92014.21303.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig92014:3..770- (Macrocystis pyrifera P11B4 male)
CGAGATCGTTCCGAGGCCGTGACTCGGGTGCTTGTGCTGCTCCCTACGCG GGAGCTAGCCTCGCAGTGTGTGGCCGTGCTGCAGATGCTGAGTCGATACA CCCCGGTGCGCCACGCTCTGGTGATTGGCGGTCTCAGTTTGGCTGCCCAA GAGGCAGAGTTGCGCACGCGTCCAGATGTGGTGGTGGCGACTCCCGGTCG GCTGGTGGATTTGCTGCGGAACTCACGGGCAGTGGACCTGGACGACCTGG AGATTCTGGTGCTGGATGAGGCGGATCGGCTGCTGGACATGGGTTTTCGC GAAGAGGTGTCCGAGGTGCTACGGCAGTGCCCTGTGCGGCGCCAGACGCT GCTTTTTTCGGCCACGTTGCAAGGCTCAGTCGCAGAGCTGGCTCGGGTGA GCCTGGAGCGGCCTGTGCGCATCTCCGCAGACCCGCTCTTCGACGTGTCC AAGCGGCTCGTGCAGGAGTTCGTGCGTGTTCGATCCGGCAACCAGAAAGA CCGCGAGGCTGTGTTGCTGTCCTTGGTGGGTCGCACGTTTCGTCGGGGCG TGCTCGTGTTCTGTGGGAGAAAAGCACAGGCGCACCGTCTGGCCATCCTC CTGGGGCTGCGAGGAGTGCGCGCAGGGGAGCTGCACGGTTCGTTGCCTCA GAGACAGCGGCTGGAGGCGCTGGAGGCCTTCCGAACGGGGGCTGTGGATG CTTTGGTGGCAACTGACGTGGCTGCTCGTGGATTGGACATTGCTGGGGTG CAGGCTGTGGTCAACTTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92014:3..770-

>mRNA_M-pyrifera_M_contig92014.21303.1 ID=mRNA_M-pyrifera_M_contig92014.21303.1|Name=mRNA_M-pyrifera_M_contig92014.21303.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig92014:3..770- (Macrocystis pyrifera P11B4 male)
CGAGATCGTTCCGAGGCCGTGACTCGGGTGCTTGTGCTGCTCCCTACGCG
GGAGCTAGCCTCGCAGTGTGTGGCCGTGCTGCAGATGCTGAGTCGATACA
CCCCGGTGCGCCACGCTCTGGTGATTGGCGGTCTCAGTTTGGCTGCCCAA
GAGGCAGAGTTGCGCACGCGTCCAGATGTGGTGGTGGCGACTCCCGGTCG
GCTGGTGGATTTGCTGCGGAACTCACGGGCAGTGGACCTGGACGACCTGG
AGATTCTGGTGCTGGATGAGGCGGATCGGCTGCTGGACATGGGTTTTCGC
GAAGAGGTGTCCGAGGTGCTACGGCAGTGCCCTGTGCGGCGCCAGACGCT
GCTTTTTTCGGCCACGTTGCAAGGCTCAGTCGCAGAGCTGGCTCGGGTGA
GCCTGGAGCGGCCTGTGCGCATCTCCGCAGACCCGCTCTTCGACGTGTCC
AAGCGGCTCGTGCAGGAGTTCGTGCGTGTTCGATCCGGCAACCAGAAAGA
CCGCGAGGCTGTGTTGCTGTCCTTGGTGGGTCGCACGTTTCGTCGGGGCG
TGCTCGTGTTCTGTGGGAGAAAAGCACAGGCGCACCGTCTGGCCATCCTC
CTGGGGCTGCGAGGAGTGCGCGCAGGGGAGCTGCACGGTTCGTTGCCTCA
GAGACAGCGGCTGGAGGCGCTGGAGGCCTTCCGAACGGGGGCTGTGGATG
CTTTGGTGGCAACTGACGTGGCTGCTCGTGGATTGGACATTGCTGGGGTG
CAGGCTGTGGTCAACTTTCGAGATCGTTCCGAGGCCGTGACTCGGGTGCT
TGTGCTGCTCCCTACGCGGGAGCTAGCCTCGCAGTGTGTGGCCGTGCTGC
AGATGCTGAGTCGATACACCCCGGTGCGCCACGCTCTGGTGATTGGCGGT
CTCAGTTTGGCTGCCCAAGAGGCAGAGTTGCGCACGCGTCCAGATGTGGT
GGTGGCGACTCCCGGTCGGCTGGTGGATTTGCTGCGGAACTCACGGGCAG
TGGACCTGGACGACCTGGAGATTCTGGTGCTGGATGAGGCGGATCGGCTG
CTGGACATGGGTTTTCGCGAAGAGGTGTCCGAGGTGCTACGGCAGTGCCC
TGTGCGGCGCCAGACGCTGCTTTTTTCGGCCACGTTGCAAGGCTCAGTCG
CAGAGCTGGCTCGGGTGAGCCTGGAGCGGCCTGTGCGCATCTCCGCAGAC
CCGCTCTTCGACGTGTCCAAGCGGCTCGTGCAGGAGTTCGTGCGTGTTCG
ATCCGGCAACCAGAAAGACCGCGAGGCTGTGTTGCTGTCCTTGGTGGGTC
GCACGTTTCGTCGGGGCGTGCTCGTGTTCTGTGGGAGAAAAGCACAGGCG
CACCGTCTGGCCATCCTCCTGGGGCTGCGAGGAGTGCGCGCAGGGGAGCT
GCACGGTTCGTTGCCTCAGAGACAGCGGCTGGAGGCGCTGGAGGCCTTCC
GAACGGGGGCTGTGGATGCTTTGGTGGCAACTGACGTGGCTGCTCGTGGA
TTGGACATTGCTGGGGTGCAGGCTGTGGTCAACTTT
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