mRNA_M-pyrifera_M_contig920.21298.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig920.21298.1 vs. uniprot
Match: D7FVI7_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI7_ECTSI) HSP 1 Score: 369 bits (946), Expect = 1.120e-105 Identity = 257/416 (61.78%), Postives = 275/416 (66.11%), Query Frame = 2 Query: 1001 KQDPPPAPFRGTFWDDEDGNSVSSAHLRHHRVRGVHRCLQGDELLTDSTERPPAAEDDGAPLGKRGNGGSEMVARVGDKNFGEGLAAGEDGEGFDALLILRQYDARTFPGGGNLSSVRQRNKTPPTHLGVHLPAIRRVSAALQHLCSWTPELRNTFCSTP---LSDGGLGRRALEAHTKSSDNRRQFFQLYRRMARQVEIVGDTTALSEEGHTPRQEFIRKMLAIGRMPVPILLRQPAALQDLNLAHRGLGDDVMCAAAEVLTRLPHIKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAAIIRGYLAHPSCSLQTLCLRSADVDDNECCDLMEAIKRNRSLTRLDVSENKIGQNEMLNAVQPDVITGGEAIASTLTGNVALRELDLSWNNLRQESAAAIGRALCL 2239 +QDPPPAPFRGTFWD+ED + AH R + G E L ST LL + LPA S + H L + P L DGGLGRRAL AHTK+ NRRQFFQLYRRMARQVEIVGDT ALS+EGHTPRQEFIRKML +GR+PVPILLR P+ALQDLNLAHRGLGDDVM AAAEVLTRLPHI T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAAIIRGYLAHPSCSLQTL LRSADVDDNECCDLMEAI N+SLTRLD+SENKIGQNEMLNAVQPDV+TGGE +A TL GNVAL+EL+LSWNNLRQESAAAIGRAL L Sbjct: 513 QQDPPPAPFRGTFWDEEDAENNPPAHC----PRCAVVLVVGKEKLAVST-----------------------------------------------LLTI-------------------------------LPADSLASFSRSHAQGAAGNLDSGSSGEPPLGLPDGGLGRRALVAHTKNEGNRRQFFQLYRRMARQVEIVGDTGALSQEGHTPRQEFIRKMLKMGRVPVPILLRDPSALQDLNLAHRGLGDDVMSAAAEVLTRLPHINTLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAAIIRGYLAHPSCSLQTLSLRSADVDDNECCDLMEAISHNQSLTRLDISENKIGQNEMLNAVQPDVVTGGEGVAETLAGNVALKELNLSWNNLRQESAAAIGRALSL 846
BLAST of mRNA_M-pyrifera_M_contig920.21298.1 vs. uniprot
Match: D7G5K1_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K1_ECTSI) HSP 1 Score: 140 bits (354), Expect = 2.350e-30 Identity = 90/250 (36.00%), Postives = 121/250 (48.40%), Query Frame = 2 Query: 1472 STPLSDGGLGRRALEAHTKSSDNRRQFFQLYRRMARQVEIVGDTTALSEEGHTPRQEFIRKMLAIGRMPVPILLRQPAALQDLNLAHRGLGDDVMCAAAEVLTRLPHIKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAAIIRGYLAHPSCSLQTLCLRSADVDDNECCDLMEAIKRNRSLTRLDVSENKIGQNEMLNAVQPDVITGGEAIASTLTGNVALRELDLSWNNLRQESAAAI 2221 S SD G L A S R +F+ LYR + RQ + V D AL E TPR+ F+R LA G P P ++R L+L +GLGD + + A L LP++ + D +A ++R Y+A C LQ L L +ADVDD+EC LMEA+ N S+ LD+S N IG E N V+PD TGGEA+A + N L LDLSWN++R S ++ Sbjct: 186 SMAASDAAHGE-DLPAEFYGSGARPRFYDLYRLVHRQKQTVDDDEALEESEFTPRRLFLRDTLARGITPSPTMMRNRKDPHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLNNILAEAVRLECLTSLDLSCNKIDHSALVLREYVASARCKLQRLSLSNADVDDDECNSLMEALAGNVSVKALDLSHNMIGDKETYNFVRPDYTTGGEAVAEMIETNTTLWSLDLSWNSVRMASGVSL 434
BLAST of mRNA_M-pyrifera_M_contig920.21298.1 vs. uniprot
Match: A0A835YQS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS8_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.030e-28 Identity = 70/108 (64.81%), Postives = 82/108 (75.93%), Query Frame = 2 Query: 1910 DEAAAIIRGYLAHPSCSLQTLCLRSADVDDNECCDLMEAIKRNRSLTRLDVSENKIGQNEMLNAVQPDVITGGEAIASTLTGNVALRELDLSWNNLRQESAAAIGRAL 2233 D+AA IIR YLA C LQ+L LR ADVDD EC +LMEA+K NRSLT LD+S N IGQ E+LN VQPD++TGGEAIA L N LR LDLSWN++R SA A+G+AL Sbjct: 15 DDAARIIRAYLADGRCCLQSLLLRGADVDDGECVELMEALKLNRSLTELDLSRNLIGQTEVLNTVQPDLVTGGEAIADMLRVNKTLRHLDLSWNSVRMGSALALGQAL 122
BLAST of mRNA_M-pyrifera_M_contig920.21298.1 vs. uniprot
Match: A0A7S3GRV5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GRV5_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.300e-28 Identity = 79/220 (35.91%), Postives = 115/220 (52.27%), Query Frame = 2 Query: 1562 YRRMARQVEIVGDTTALSEEGHTPRQEFIRKMLAIGRMPVPILLRQPAALQDLNLAHRGLGDDVMCAAAEVLTRLPHIKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAAIIRGYLAHPSCSLQTLCLRSADVDDNECCDLMEAIKRNRSLTRLDVSENKIGQNEMLNAVQPDVITGGEAIASTLTGNVALRELDLSWNNLRQESAAAI 2221 +++ + +E + L E TPRQ ++R++ MP+PI+LR+ + ++L+HRGLGD + +V+ LP I+T D+++A I +L C L TL L ADVDD EC +L EAI N+S+ L +S+N IG +E+LN + P +ITGGEA+ L N L ELDLSWN +R ESA AI Sbjct: 288 FKKATKDLERYPNEEDLPAEKKTPRQLYLREVAKSNLMPLPIILRKDSNPMGIHLSHRGLGDVRVAPLIKVMHTLPAIQTIDLCDNRLTDVTLVPLAANLIHFKSLTHLDLSFNKMDDSSAAIMEFLRSDDCKLFTLLLNGADVDDGECRNLAEAISMNQSIKTLGLSKNLIGSDELLNVLNPSLITGGEALGDMLRKNTTLTELDLSWNAIRLESAIAI 507
BLAST of mRNA_M-pyrifera_M_contig920.21298.1 vs. uniprot
Match: A0A7S1Y0H9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0H9_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.200e-27 Identity = 99/194 (51.03%), Postives = 137/194 (70.62%), Query Frame = 2 Query: 1643 FIRKMLAIGRMPVPILLRQPAALQDLNLAHRGLGDDVMCAAAEVLTRLPHIKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAAIIRGYLAHPSCSLQTLCLRSADVDDNECCDLMEAIKRNRSLTRLDVSENKIGQNEMLNAVQPDVITGGEAIASTLTGNVALRELDLSWNNLRQESAAAIG 2224 +++++ G++ +P+L+R+ + L+ ++GLGD+ + A AEVL LP ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ I+ YL PSC+++ L L AD+DD+EC LMEA+ N S+ L++S N IG NE LN V+PD++TGGEAIA LT N+ L+ LDLSWN +R +SA IG Sbjct: 2 LLKRLMDRGQLTLPLLMRKATKPKALDFNNKGLGDNSIKALAEVLATLPLVEELLVANNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEILMAYLRRPSCTIRRLVLIEADIDDDECVVLMEALSVNSSIDYLNLSHNLIGDNENLNIVRPDLVTGGEAIAEMLTVNLRLKHLDLSWNKIRMDSATQIG 195
BLAST of mRNA_M-pyrifera_M_contig920.21298.1 vs. uniprot
Match: A0A8J2WTH8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTH8_9STRA) HSP 1 Score: 126 bits (316), Expect = 8.670e-26 Identity = 76/206 (36.89%), Postives = 111/206 (53.88%), Query Frame = 2 Query: 1598 DTTALSEEGHTPRQEFIRKMLAIGRMPVPILLRQPAALQD-LNLAHRGLGDDVMCAAAEVLTRLPHIKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAAIIRGYLAHPSCSLQTLCLRSADVDDNECCDLMEAIKRNRSLTRLDVSENKIGQNEMLNAVQPDVITGGEAIASTLTGNVALRELDLSWNNLRQESA 2212 D L+ E TPRQ+++R++L +P P+L R+ L+L G+GD ++ + A+VL L + T D ++A +R YLA PSC+L +L + ADVDD EC D M +++ N SLT L +SEN IG E LN+VQP++ TGGEA+AS L N + LD+SWN +R++SA Sbjct: 395 DDNLLTREAMTPRQKYLREILRKKALPYPVLCRRRKDKPGTLDLTGAGVGDVIVESLAQVLDGLHDVDTLLLADNRLTDLSLEPLLEAIASLPHLTSLDLSGAKMDASSAKLREYLASPSCALTSLVMSRADVDDWECADFMASLQSNASLTSLSLSENLIGDAEALNSVQPELETGGEALASMLRSNKHVTYLDVSWNKIRRDSA 600
BLAST of mRNA_M-pyrifera_M_contig920.21298.1 vs. uniprot
Match: H3GIN7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIN7_PHYRM) HSP 1 Score: 115 bits (287), Expect = 2.240e-22 Identity = 78/214 (36.45%), Postives = 100/214 (46.73%), Query Frame = 2 Query: 1595 GDTTALSEEGHTPRQEFIRKMLAIGRMPVPILLRQPAALQDLNLAHRGLGDDVMCAAAEVLTRLPHIKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAA-IIRGYLAHPSCSLQTLCLRSADVDDNECCDLMEAIKRNRSLTRLDVSENKIGQNEMLNAVQPDVITGGEAIASTLTGNVALRELDLSWNNLRQESAAAIGRAL 2233 G T LS + T R +F L P L+ + ++N++H +GDD+ C A L LP + D AA + YL+ SCSLQTL L SADVDD E A+ N+SL LDVS N IG +E LN V+P V TGGEA+A+ ++ N L LDLSWN LR A IG+AL Sbjct: 199 GVGTVLSGDPFTARHKFASLCLERDLPPCIRLIIRQYFSPEINVSHMAIGDDLACVFASCLLDLPMVTGLNARNNRLRDQGLQALVSVVVAKSDLYHLDLSENKVDNHAAHALASYLSSASCSLQTLRLASADVDDGELVPFARALHSNKSLQTLDVSRNAIGSSEHLNVVRPSVTTGGEALATMISINSTLTSLDLSWNYLRLAGAVEIGKAL 412
BLAST of mRNA_M-pyrifera_M_contig920.21298.1 vs. uniprot
Match: A0A7S3UU35_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU35_HETAK) HSP 1 Score: 111 bits (278), Expect = 8.720e-22 Identity = 56/109 (51.38%), Postives = 78/109 (71.56%), Query Frame = 2 Query: 1910 DEAAAIIRGYLAHPSCSLQTLCLRSADVDDNECCDLMEAIKRNRSLTRLDVSENKIGQNEMLNAVQPDVITGGEAIASTLTG-NVALRELDLSWNNLRQESAAAIGRAL 2233 + A+ + YL PSC+L +L + +D+DD+ECC+L++A+ NR+LT LD+S N IG NE++N VQPD TGGEA+A +L N LR L+LSWN +R ESA A+G AL Sbjct: 2 ERASDALLEYLRLPSCALVSLVMSKSDIDDDECCNLLDALAHNRNLTSLDLSHNLIGTNEVMNVVQPDYTTGGEAVAESLEHPNCKLRALNLSWNLIRLESAVALGEAL 110
BLAST of mRNA_M-pyrifera_M_contig920.21298.1 vs. uniprot
Match: W2RGE0_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2RGE0_PHYPN) HSP 1 Score: 112 bits (281), Expect = 1.030e-21 Identity = 75/213 (35.21%), Postives = 102/213 (47.89%), Query Frame = 2 Query: 1598 DTTALSEEGHTPRQEFIRKMLAIGRMPVPILLRQPAALQDLNLAHRGLGDDVMCAAAEVLTRLPHIKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDE-AAAIIRGYLAHPSCSLQTLCLRSADVDDNECCDLMEAIKRNRSLTRLDVSENKIGQNEMLNAVQPDVITGGEAIASTLTGNVALRELDLSWNNLRQESAAAIGRAL 2233 +++ LS + T R +F L P L+ + ++N++H +GDD+ C A L LP + D AA + YL+ SCSLQTL L SADVDD+E A+ N+SL LDVS N +G +E LN V+P V TGGEA+A+ ++ N L LDLSWN LR A IG+AL Sbjct: 192 NSSILSADPFTARHKFSSLCLERDLPPCIRLIVRQYFSPEINVSHMAIGDDLACVFAACLLDLPMVTGLNARNNRLRDRGLQALVDVVVTKADLYHLDLSENKVDHHAAQALASYLSSASCSLQTLRLASADVDDDELVPFARALHSNKSLQILDVSRNSVGSSEHLNVVRPSVTTGGEALATMISINSTLTSLDLSWNYLRLAGAIEIGKAL 404
BLAST of mRNA_M-pyrifera_M_contig920.21298.1 vs. uniprot
Match: V9G145_PHYPR (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=V9G145_PHYPR) HSP 1 Score: 112 bits (281), Expect = 1.150e-21 Identity = 75/213 (35.21%), Postives = 102/213 (47.89%), Query Frame = 2 Query: 1598 DTTALSEEGHTPRQEFIRKMLAIGRMPVPILLRQPAALQDLNLAHRGLGDDVMCAAAEVLTRLPHIKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDE-AAAIIRGYLAHPSCSLQTLCLRSADVDDNECCDLMEAIKRNRSLTRLDVSENKIGQNEMLNAVQPDVITGGEAIASTLTGNVALRELDLSWNNLRQESAAAIGRAL 2233 +++ LS + T R +F L P L+ + ++N++H +GDD+ C A L LP + D AA + YL+ SCSLQTL L SADVDD+E A+ N+SL LDVS N +G +E LN V+P V TGGEA+A+ ++ N L LDLSWN LR A IG+AL Sbjct: 192 NSSILSADPFTARHKFSSLCLERDLPPCIRLIVRQYFSPEINVSHMAIGDDLACVFAACLLDLPMVTGLNARNNRLRDRGLQALVDVVVTKADLYHLDLSENKVDHHAAQALASYLSSASCSLQTLRLASADVDDDELVPFARALHSNKSLQILDVSRNSVGSSEHLNVVRPSVTTGGEALATMISINSTLTSLDLSWNYLRLAGAIEIGKAL 404 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig920.21298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig920.21298.1 >prot_M-pyrifera_M_contig920.21298.1 ID=prot_M-pyrifera_M_contig920.21298.1|Name=mRNA_M-pyrifera_M_contig920.21298.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=647bp MLPSLRYRGSRNVSQADVGLDEQSGQNGSGSVSLGRNNSAIGNGREASTRback to top mRNA from alignment at M-pyrifera_M_contig920:496..21825- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig920.21298.1 ID=mRNA_M-pyrifera_M_contig920.21298.1|Name=mRNA_M-pyrifera_M_contig920.21298.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=21330bp|location=Sequence derived from alignment at M-pyrifera_M_contig920:496..21825- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig920:496..21825- >mRNA_M-pyrifera_M_contig920.21298.1 ID=mRNA_M-pyrifera_M_contig920.21298.1|Name=mRNA_M-pyrifera_M_contig920.21298.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3882bp|location=Sequence derived from alignment at M-pyrifera_M_contig920:496..21825- (Macrocystis pyrifera P11B4 male)back to top |