mRNA_M-pyrifera_M_contig9198.21296.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9198.21296.1
Unique NamemRNA_M-pyrifera_M_contig9198.21296.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig9198.21296.1 vs. uniprot
Match: K1PQ59_CRAGI (Uncharacterized protein n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1PQ59_CRAGI)

HSP 1 Score: 68.6 bits (166), Expect = 1.330e-11
Identity = 52/147 (35.37%), Postives = 70/147 (47.62%), Query Frame = 1
Query:    1 TPLLLAAFLGFAELVEALLDCGADVDATSTERDCTPLHAAAYFGRVDVVRMLCAYGAAVNRTDAF----------GVRALFLA---ESAAVSRTLLEYGADVNLRSGPEMRTALHAAVDIGNAEAVEFLCTM-GADVNRTDARGMTP 399
            TPL LA  +   ELVE L+  GAD+       + TPLH A+Y G  ++V  L  Y +   R   F          G   L L+    S  V   L ++GADVN R G   +T LH A D+GN   ++++  + G DVN     G TP
Sbjct:   22 TPLHLAVLVRSVELVEILIQSGADLGCRDLHGN-TPLHIASYHGFDNIVVCLLKYASGKKRKSTFIQEINDRNYEGQSCLHLSTFNNSLPVINLLSKFGADVNARDGKSGKTILHYAADMGNTILMDYILQLPGVDVNSQTYAGQTP 167          
BLAST of mRNA_M-pyrifera_M_contig9198.21296.1 vs. uniprot
Match: A0A0N9EK95_CRAGI (Inhibitor protein kappa B n=2 Tax=Crassostrea gigas TaxID=29159 RepID=A0A0N9EK95_CRAGI)

HSP 1 Score: 66.2 bits (160), Expect = 3.310e-10
Identity = 51/147 (34.69%), Postives = 69/147 (46.94%), Query Frame = 1
Query:    1 TPLLLAAFLGFAELVEALLDCGADVDATSTERDCTPLHAAAYFGRVDVVRMLCAYGAAVNRTDAF----------GVRALFLA---ESAAVSRTLLEYGADVNLRSGPEMRTALHAAVDIGNAEAVEFLCTM-GADVNRTDARGMTP 399
            TPL LA  +   ELVE L+  GAD+       + TPLH A+Y G  ++V  L  Y +   R   F          G   L L+    S  V   L  +GADVN R G   +T LH A ++GN   ++++  + G DVN     G TP
Sbjct:  138 TPLHLAVLVRSVELVEILIQSGADLGCRDLHGN-TPLHIASYHGFDNIVVCLLKYASGKKRKSTFIQEINDRNYEGQSCLHLSTFNNSLPVINLLSRFGADVNARDGKSGKTILHYAAEMGNTILMDYVLQLPGVDVNSQTYAGQTP 283          
BLAST of mRNA_M-pyrifera_M_contig9198.21296.1 vs. uniprot
Match: A0A0D1ZYP6_9EURO (Phospholipase A(2) n=1 Tax=Cladophialophora immunda TaxID=569365 RepID=A0A0D1ZYP6_9EURO)

HSP 1 Score: 63.2 bits (152), Expect = 6.270e-9
Identity = 47/134 (35.07%), Postives = 66/134 (49.25%), Query Frame = 1
Query:    1 TPLLLAAFLGFAELVEALLDCGADVDATSTERDCTPLHAAAYFGRVDVVRMLCAYGAAVNRTDAFGVRALFLAESAAVSRTLLEYGADVNLRSGPEMRTALHAAVDIGNAEAVEFLCTMGADVNRTDARGMTPL 402
            T L LA + G  E+V +LL  GAD +AT+ E     LH AA    +DV++ +      +    + G   L LA    + + LL+ GA++N R   +  T LH A    + + VE L   GADVN     G TPL
Sbjct:  967 TALHLAIYQGLPEMVNSLLQRGADPNATNCE-GMNALHRAAQGDDIDVLKTVLELTDDIEVQMSDGETPLLLATDFGIVQALLDNGANINARRQTDGCTKLHFATRDASEQVVEILLKRGADVNAMTNTGQTPL 1099          
BLAST of mRNA_M-pyrifera_M_contig9198.21296.1 vs. uniprot
Match: UPI00143D2588 (transient receptor potential channel pyrexia-like n=1 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143D2588)

HSP 1 Score: 58.5 bits (140), Expect = 2.450e-7
Identity = 46/127 (36.22%), Postives = 64/127 (50.39%), Query Frame = 1
Query:    1 TPLLLAAFLGFAELVEALLDCGADVDATSTERDCTPLHAAAYFGRVDVVRMLCAYGAAVNR--TDAFGVRALFLAESAAVSRTLLEYGADVNLRSGPEM--RTALHAAVDIGNAEAVEFLCTMGADV 369
            T L LAA LG  E+V+ LL+ GA+       R CTPLH A+  G +  V+ L A GA VN   ++   +    L+ +++    LLE GA  N    P++   T LH A  +G    +  L   GADV
Sbjct:  164 TSLHLAACLGAEEIVQELLNHGANPGEWDFNRTCTPLHCASAAGDLGTVKCLLAAGADVNAGISERSPLHYAVLSNNSSCVEALLEAGASPN---NPQVYTETPLHVAASLGATTCLNLLLYFGADV 287          
BLAST of mRNA_M-pyrifera_M_contig9198.21296.1 vs. uniprot
Match: A0A8J8VZS1_9EURO (AAA domain-containing protein n=1 Tax=Penicillium sp. RFL-2021a TaxID=2839758 RepID=A0A8J8VZS1_9EURO)

HSP 1 Score: 58.2 bits (139), Expect = 3.400e-7
Identity = 45/138 (32.61%), Postives = 68/138 (49.28%), Query Frame = 1
Query:    1 TPLLLAAFLGFAELVEALLDCGADVDATSTERDCTPLHAAAYFGRVDVVRMLCAYGAAVNRTDAFGVRALFLAESAAVSRT----LLEYGADVNLRSGPEMRTALHAAVDIGNAEAVEFLCTMGADVNRTDARGMTPL 402
            TPL  A + G  E+VE LL+CGA+ +A +     T LH A+  G    +++L      +N  D  G  +L  A   A        L+++ AD+N ++  +  TALH AV       + FL   GA V+  +  G+TPL
Sbjct:  654 TPLHCAVYQGNDEMVEFLLECGANGNAMTANGQ-TALHIASQRGHRKCMKLLFNNQVDLNVADHNGFSSLHSAVGTATDEATVPLLVKHKADLNFQNPKDGNTALHLAVQWRRPRIILFLLEKGATVDLANDEGLTPL 790          
BLAST of mRNA_M-pyrifera_M_contig9198.21296.1 vs. uniprot
Match: A0A2P2HXM9_9CRUS (Protein fem-1 homolog C-like n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2HXM9_9CRUS)

HSP 1 Score: 57.4 bits (137), Expect = 5.970e-7
Identity = 41/123 (33.33%), Postives = 70/123 (56.91%), Query Frame = 1
Query:    1 TPLLLAAFLGFAELVEALLDCGADVDATSTERDCTPLHAAAYFGRVDVVRMLCAYGAAVNRTDAFGVRALFLA-ESAAVSRTLLEYGADVNLRSGPEMRTALHAAVDIGNAEAVEFLCTMGAD 366
            TPL  AA  G  E+V+ L+D GA++++ S +   T + +A +   +D+V+ L   GA V + +  G   L  + +S A+ + LL++GA +N +   + +TALH A++    E V+ L   GAD
Sbjct:  108 TPLWCAAVAGKKEVVQVLIDHGANINSVS-DTGSTSVRSACFMTHIDIVKYLVEKGANVLKPNFNGGTCLINSVQSVALCKFLLDHGAHINAQD-IKCKTALHYAIEEHRLETVKLLLDRGAD 228          
BLAST of mRNA_M-pyrifera_M_contig9198.21296.1 vs. uniprot
Match: A0A522DC71_9PROT (Ankyrin repeat domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A522DC71_9PROT)

HSP 1 Score: 55.8 bits (133), Expect = 8.710e-7
Identity = 42/121 (34.71%), Postives = 60/121 (49.59%), Query Frame = 1
Query:   46 EALLDCGADVDATSTERDCTPLHAAAYFGRVDVVRMLCAYGAAVNR-TDAFGVRALFLAESAA---VSRTLLEYGADVNLRSGPEMRTALHAAVDIGNAEAVEFLCTMGADVNRTDARGMT 396
            E +L  G  +D    E    PLH AAYFGR+D+VR L + GA ++     FG  AL+ A +     ++R L+E GA+VN+      +  LH +   G+      L   G +V   D RG T
Sbjct:   58 EVILGKGGAIDMPDDEGR-RPLHEAAYFGRIDMVRFLLSCGAVMDAPVHPFGHTALWFAVAQGHHGIARLLIERGANVNVADALNGQGLLHLSAMRGDMVMTGMLIAAGINVLAEDRRGQT 177          
BLAST of mRNA_M-pyrifera_M_contig9198.21296.1 vs. uniprot
Match: UPI001CFAA9F7 (ankyrin repeat and SOCS box protein 16 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFAA9F7)

HSP 1 Score: 56.6 bits (135), Expect = 1.050e-6
Identity = 46/137 (33.58%), Postives = 67/137 (48.91%), Query Frame = 1
Query:    1 TPLLLAAFLGFAELVEALLDCGADVDATSTERDCTPLHAAAYFGRVDVVRMLCAYGAAVNRTDAFGVRALFLA---ESAAVSRTLLEYGADVNLRSGPEMRTALHAAVDIGNAEAVEFLCTMGADVNRTDARGMTPL 402
            + L +AA  G+ + +  LL  GAD++A    +  T LH A    + +   +L ++GA  N     GV  L L    E+   +++LLEYGA VNL+S     TALH A   G  E ++     GAD+      G T L
Sbjct:  117 SALRIAAARGYTDCLRHLLMHGADINAAPGGQ--TALHDACANKQTESTELLLSFGANPNVFSEEGVTPLHLCNTPETFQCAKSLLEYGAKVNLQSKENHSTALHTAAKHGLEEHLKLYLCYGADIFHRTREGETAL 251          
BLAST of mRNA_M-pyrifera_M_contig9198.21296.1 vs. uniprot
Match: UPI001150DE37 (hypothetical protein n=1 Tax=Pyricularia pennisetigena TaxID=1578925 RepID=UPI001150DE37)

HSP 1 Score: 56.6 bits (135), Expect = 1.150e-6
Identity = 61/149 (40.94%), Postives = 70/149 (46.98%), Query Frame = 1
Query:    4 PLLLAAFLGFAELVEALLDCGADVDATSTERDCTPLHAAAYFGRVDVVRMLCAYGAAVNRTDAFGVRALFLAESA---AVSRTLLEYGADVNLRSGPEMR-----------TALHAAVDIGNAEAVEFLCT-MGADVNRT-DARGMTPL 402
            PLL AA LG A +V+ LL  GAD++     R  T LHAAA    +DVVR L A GAAV      G   L LA  A   AV+R LL         S  E             TAL  AVD G+ +  + L    GAD  R  DA G TPL
Sbjct:  461 PLLAAARLGNAAVVDLLLAQGADLNQADAHRQ-TALHAAAAHNHLDVVRRLVAAGAAVRSLRDDGATPLLLAVRAGHEAVARHLLLGPVPAPAESPVEREGVGGGSCAPGPTALWHAVDRGHHDMAKLLVVERGADPFRVVDAWGSTPL 608          
BLAST of mRNA_M-pyrifera_M_contig9198.21296.1 vs. uniprot
Match: A0A6G0UNZ8_9BILA (Uncharacterized protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UNZ8_9BILA)

HSP 1 Score: 56.2 bits (134), Expect = 1.520e-6
Identity = 52/158 (32.91%), Postives = 72/158 (45.57%), Query Frame = 1
Query:    1 TPLLLAAFLGFAELVEALLDCGAD--VDATSTERDCTPLHAAAYFGRVDVVRMLCAYGAA-VNRTDAFGVRALFLA---------------ESAAVSRTLLEYGADVNLRSGPEMRTALHAAVDIGNAEAVEFLCT------MGADVNRTDARGMTPL 402
            TPL LAA  G  E+VE LL+ GA+  +  +  ERD  PLH AA  G   VV +LC++    +N  +  G+ AL  A               +S    + LL YGAD  +      +T +H AVD  +   +E          M + VN+ D    TPL
Sbjct:  477 TPLFLAAEKGCPEIVEYLLEAGANPNIQTSRPERD-APLHFAAARGMTPVVSILCSHPRININGMNGMGLTALLCAVKTHGVLDEESQSIIDSRPTIQALLAYGADPAIPDATNGKTVIHYAVDRMDQSLIEVFMNNLPDEAMTSLVNKPDLCNETPL 633          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9198.21296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K1PQ59_CRAGI1.330e-1135.37Uncharacterized protein n=1 Tax=Crassostrea gigas ... [more]
A0A0N9EK95_CRAGI3.310e-1034.69Inhibitor protein kappa B n=2 Tax=Crassostrea giga... [more]
A0A0D1ZYP6_9EURO6.270e-935.07Phospholipase A(2) n=1 Tax=Cladophialophora immund... [more]
UPI00143D25882.450e-736.22transient receptor potential channel pyrexia-like ... [more]
A0A8J8VZS1_9EURO3.400e-732.61AAA domain-containing protein n=1 Tax=Penicillium ... [more]
A0A2P2HXM9_9CRUS5.970e-733.33Protein fem-1 homolog C-like n=1 Tax=Hirondellea g... [more]
A0A522DC71_9PROT8.710e-734.71Ankyrin repeat domain-containing protein n=1 Tax=A... [more]
UPI001CFAA9F71.050e-633.58ankyrin repeat and SOCS box protein 16 n=1 Tax=Pro... [more]
UPI001150DE371.150e-640.94hypothetical protein n=1 Tax=Pyricularia penniseti... [more]
A0A6G0UNZ8_9BILA1.520e-632.91Uncharacterized protein n=1 Tax=Halicephalobus sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9198contigM-pyrifera_M_contig9198:9687..10088 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score68.2
Seed ortholog evalue3.4e-09
Seed eggNOG ortholog1158762.KB898039_gene1641
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.ankyrin repeat
EggNOG OGs1RBYV@1224,1SE9G@1236,COG0666@1,COG0666@2
COG Functional cat.ET
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size402
Cds size402
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816832.7762513-CDS-M-pyrifera_M_contig9198:9686..100881622816832.7762513-CDS-M-pyrifera_M_contig9198:9686..10088Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9198 9687..10088 -
1692278205.0203862-CDS-M-pyrifera_M_contig9198:9686..100881692278205.0203862-CDS-M-pyrifera_M_contig9198:9686..10088Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9198 9687..10088 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9198.21296.1prot_M-pyrifera_M_contig9198.21296.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9198 9687..10088 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9198.21296.1

>prot_M-pyrifera_M_contig9198.21296.1 ID=prot_M-pyrifera_M_contig9198.21296.1|Name=mRNA_M-pyrifera_M_contig9198.21296.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp
TPLLLAAFLGFAELVEALLDCGADVDATSTERDCTPLHAAAYFGRVDVVR
MLCAYGAAVNRTDAFGVRALFLAESAAVSRTLLEYGADVNLRSGPEMRTA
LHAAVDIGNAEAVEFLCTMGADVNRTDARGMTPL
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mRNA from alignment at M-pyrifera_M_contig9198:9687..10088-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9198.21296.1 ID=mRNA_M-pyrifera_M_contig9198.21296.1|Name=mRNA_M-pyrifera_M_contig9198.21296.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=402bp|location=Sequence derived from alignment at M-pyrifera_M_contig9198:9687..10088- (Macrocystis pyrifera P11B4 male)
ACTCCCCTGCTCCTGGCCGCGTTTCTAGGGTTCGCGGAGTTGGTGGAGGC GTTGTTGGATTGCGGGGCCGACGTGGATGCGACGTCCACGGAGCGGGACT GCACGCCGCTGCACGCCGCGGCGTACTTTGGGCGCGTGGATGTGGTCCGA ATGCTGTGCGCTTACGGAGCGGCGGTGAATCGAACGGACGCTTTCGGAGT GCGGGCTCTGTTCCTGGCCGAGTCTGCGGCCGTCTCGCGCACGCTGCTGG AGTATGGGGCCGACGTTAACCTCCGCTCCGGGCCGGAGATGCGCACGGCC CTGCACGCCGCGGTGGACATCGGGAACGCGGAGGCCGTCGAGTTTCTGTG CACGATGGGCGCCGATGTTAACCGCACGGATGCTAGGGGCATGACCCCCC TC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig9198:9687..10088-

>mRNA_M-pyrifera_M_contig9198.21296.1 ID=mRNA_M-pyrifera_M_contig9198.21296.1|Name=mRNA_M-pyrifera_M_contig9198.21296.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig9198:9687..10088- (Macrocystis pyrifera P11B4 male)
ACTCCCCTGCTCCTGGCCGCGTTTCTAGGGTTCGCGGAGTTGGTGGAGGC
GTTGTTGGATTGCGGGGCCGACGTGGATGCGACGTCCACGGAGCGGGACT
GCACGCCGCTGCACGCCGCGGCGTACTTTGGGCGCGTGGATGTGGTCCGA
ATGCTGTGCGCTTACGGAGCGGCGGTGAATCGAACGGACGCTTTCGGAGT
GCGGGCTCTGTTCCTGGCCGAGTCTGCGGCCGTCTCGCGCACGCTGCTGG
AGTATGGGGCCGACGTTAACCTCCGCTCCGGGCCGGAGATGCGCACGGCC
CTGCACGCCGCGGTGGACATCGGGAACGCGGAGGCCGTCGAGTTTCTGTG
CACGATGGGCGCCGATGTTAACCGCACGGATGCTAGGGGCATGACCCCCC
TCACTCCCCTGCTCCTGGCCGCGTTTCTAGGGTTCGCGGAGTTGGTGGAG
GCGTTGTTGGATTGCGGGGCCGACGTGGATGCGACGTCCACGGAGCGGGA
CTGCACGCCGCTGCACGCCGCGGCGTACTTTGGGCGCGTGGATGTGGTCC
GAATGCTGTGCGCTTACGGAGCGGCGGTGAATCGAACGGACGCTTTCGGA
GTGCGGGCTCTGTTCCTGGCCGAGTCTGCGGCCGTCTCGCGCACGCTGCT
GGAGTATGGGGCCGACGTTAACCTCCGCTCCGGGCCGGAGATGCGCACGG
CCCTGCACGCCGCGGTGGACATCGGGAACGCGGAGGCCGTCGAGTTTCTG
TGCACGATGGGCGCCGATGTTAACCGCACGGATGCTAGGGGCATGACCCC
CCTC
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