mRNA_M-pyrifera_M_contig91957.21292.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91957.21292.1
Unique NamemRNA_M-pyrifera_M_contig91957.21292.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig91957.21292.1 vs. uniprot
Match: A0A220WA96_9SPHN (Amidohydrolase n=1 Tax=Sphingorhabdus sp. SMR4y TaxID=2584094 RepID=A0A220WA96_9SPHN)

HSP 1 Score: 466 bits (1200), Expect = 1.470e-164
Identity = 215/231 (93.07%), Postives = 227/231 (98.27%), Query Frame = 1 
Query:    1 VCMLPQSPEADMTSSIAELERCVGMGFVGCNLNPDPGGGKFEHPPLTDKFWYPFYEKMVELDMPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQGDLFRDFPELRLIIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVYHQPGINLLADVIDNKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALDISDAERHAIFEGNARRVFPRLDAQLKERGL 693
            VCMLPQSPEADMTSSIAELERCV MGF+GCNLNPDPGGGKFEHPPLTDK+WYPFYEKM ELD+PAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQG+LF+DFP LRLIIPHGGGAVPYHWGRYRGLADMLKQPDL+ H+MNNVYFDTCVYHQPGINLLADVI+NKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALD++DAERHAIFEGNARRV+PRLDAQL+ERGL
Sbjct:  110 VCMLPQSPEADMTSSIAELERCVDMGFIGCNLNPDPGGGKFEHPPLTDKYWYPFYEKMCELDVPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQGNLFKDFPSLRLIIPHGGGAVPYHWGRYRGLADMLKQPDLAGHVMNNVYFDTCVYHQPGINLLADVIENKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALDLTDAERHAIFEGNARRVYPRLDAQLQERGL 340
[Close]
BLAST of mRNA_M-pyrifera_M_contig91957.21292.1 vs. uniprot
Match: A0A127MDF5_9SPHN (4-oxalomesaconate hydratase n=3 Tax=Sphingomonadales TaxID=204457 RepID=A0A127MDF5_9SPHN)

HSP 1 Score: 460 bits (1184), Expect = 4.010e-162
Identity = 213/231 (92.21%), Postives = 222/231 (96.10%), Query Frame = 1 
Query:    1 VCMLPQSPEADMTSSIAELERCVGMGFVGCNLNPDPGGGKFEHPPLTDKFWYPFYEKMVELDMPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQGDLFRDFPELRLIIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVYHQPGINLLADVIDNKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALDISDAERHAIFEGNARRVFPRLDAQLKERGL 693
            VCMLPQSP+ADM  SI ELERCV MGFVGCNLNPDPGGGKFEHPPLTD++WYPFYEKMVELD+PAMIHVSGSCNPAMHATGAYYIAADTIAFMQ IQGDLFRDFP+LR IIPHGGGAVPYHWGRYRGLADMLKQPDLS H+MNNVYFDTCVYHQPG+ LLADVIDNKNILFGSEMVGAVRGIDPQTG YFDDTKRYVDALDISDAERHAIFEGNARRV+PR+DAQLKERGL
Sbjct:  110 VCMLPQSPKADMQGSIEELERCVDMGFVGCNLNPDPGGGKFEHPPLTDEYWYPFYEKMVELDVPAMIHVSGSCNPAMHATGAYYIAADTIAFMQFIQGDLFRDFPDLRFIIPHGGGAVPYHWGRYRGLADMLKQPDLSGHVMNNVYFDTCVYHQPGVTLLADVIDNKNILFGSEMVGAVRGIDPQTGQYFDDTKRYVDALDISDAERHAIFEGNARRVYPRMDAQLKERGL 340
[Close]
BLAST of mRNA_M-pyrifera_M_contig91957.21292.1 vs. uniprot
Match: LIGJ_SPHSK (2-keto-4-carboxy-3-hexenedioate hydratase n=11 Tax=Sphingomonadaceae TaxID=41297 RepID=LIGJ_SPHSK)

HSP 1 Score: 444 bits (1143), Expect = 7.260e-156
Identity = 207/232 (89.22%), Postives = 219/232 (94.40%), Query Frame = 1 
Query:    1 VCMLPQSPEADMTSSIAELERCVG-MGFVGCNLNPDPGGGKFEHPPLTDKFWYPFYEKMVELDMPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQGDLFRDFPELRLIIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVYHQPGINLLADVIDNKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALDISDAERHAIFEGNARRVFPRLDAQLKERGL 693
            VCMLPQSPEADMTSSIAELERCV  +GF+GCNLNPDPGGG F+HPPLTD+FWYPFYEKMVELD+PAMIHVSGSCNPAMHATGAYY+AADTIAFMQL+QG+LF DFP LR IIPHGGGAVPYHWGR+RGLADMLKQP L T LMNNV+FDTCVYHQPGINLLADVIDNKNILFGSEMVGAVRGIDP TGHYFDDTKRY+DALDISD ERHAIFEGN RRVFPRLDA+LK RGL
Sbjct:  110 VCMLPQSPEADMTSSIAELERCVNELGFIGCNLNPDPGGGHFKHPPLTDRFWYPFYEKMVELDVPAMIHVSGSCNPAMHATGAYYLAADTIAFMQLLQGNLFADFPTLRFIIPHGGGAVPYHWGRFRGLADMLKQPSLDTLLMNNVFFDTCVYHQPGINLLADVIDNKNILFGSEMVGAVRGIDPTTGHYFDDTKRYIDALDISDQERHAIFEGNTRRVFPRLDAKLKARGL 341
[Close]
BLAST of mRNA_M-pyrifera_M_contig91957.21292.1 vs. uniprot
Match: A0A173L2S5_9SPHN (4-oxalmesaconate hydratase n=114 Tax=Bacteria TaxID=2 RepID=A0A173L2S5_9SPHN)

HSP 1 Score: 444 bits (1143), Expect = 7.260e-156
Identity = 204/232 (87.93%), Postives = 221/232 (95.26%), Query Frame = 1 
Query:    1 VCMLPQSPEADMTSSIAELERCVG-MGFVGCNLNPDPGGGKFEHPPLTDKFWYPFYEKMVELDMPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQGDLFRDFPELRLIIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVYHQPGINLLADVIDNKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALDISDAERHAIFEGNARRVFPRLDAQLKERGL 693
            VCMLPQSP+ADM +SIAELERCV  +GF+GCNLNPDPGGG F+HPPLTD++WYPFYEKMVELD+PAMIHVSGSCNPAMHATG YYIAADTIAFMQL++GDLF+DFP+LR IIPHGGGAVPYHWGRYRGLADMLK+P L THLMNN++FDTCVYHQPGI+LLADVIDNKNILFGSEMVGAVRGIDP TGHYFDDTKRYVDALDI +AERHAIFEGNARRVFPRLDAQLK RGL
Sbjct:  110 VCMLPQSPKADMANSIAELERCVTELGFIGCNLNPDPGGGHFQHPPLTDRYWYPFYEKMVELDVPAMIHVSGSCNPAMHATGGYYIAADTIAFMQLLEGDLFKDFPKLRFIIPHGGGAVPYHWGRYRGLADMLKKPSLDTHLMNNIFFDTCVYHQPGIDLLADVIDNKNILFGSEMVGAVRGIDPTTGHYFDDTKRYVDALDIGEAERHAIFEGNARRVFPRLDAQLKARGL 341
[Close]
BLAST of mRNA_M-pyrifera_M_contig91957.21292.1 vs. uniprot
Match: A0A4Q3APX8_9SPHN (Amidohydrolase (Fragment) n=1 Tax=Sphingomonadales bacterium TaxID=1978525 RepID=A0A4Q3APX8_9SPHN)

HSP 1 Score: 440 bits (1132), Expect = 8.890e-156
Identity = 203/231 (87.88%), Postives = 215/231 (93.07%), Query Frame = 1 
Query:    1 VCMLPQSPEADMTSSIAELERCVGMGFVGCNLNPDPGGGKFEHPPLTDKFWYPFYEKMVELDMPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQGDLFRDFPELRLIIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVYHQPGINLLADVIDNKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALDISDAERHAIFEGNARRVFPRLDAQLKERGL 693
            VCMLPQ+P ADM+ SIAELERCV MGF+GCNLNPDPGGG F+ PPLTDKFWYPFYEKMVELD+PAMIHVSGSCNP +HATGAYYIAADTIAFMQL++GDLF DFP LR IIPHGGGAVPYHWGRYRGLADMLKQP L  H+MNNVYFDTCVYHQPGI+LL +VID KNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDAL ISD +RHAIFEGNARRVFPRLDAQLKERGL
Sbjct:    9 VCMLPQNPAADMSGSIAELERCVAMGFIGCNLNPDPGGGHFKSPPLTDKFWYPFYEKMVELDVPAMIHVSGSCNPGLHATGAYYIAADTIAFMQLVEGDLFADFPTLRFIIPHGGGAVPYHWGRYRGLADMLKQPSLDGHVMNNVYFDTCVYHQPGIDLLNEVIDTKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALPISDEQRHAIFEGNARRVFPRLDAQLKERGL 239
[Close]
BLAST of mRNA_M-pyrifera_M_contig91957.21292.1 vs. uniprot
Match: A0A7U4JAR3_9SPHN (4-oxalomesaconate hydratase n=1 Tax=Sphingomonas hengshuiensis TaxID=1609977 RepID=A0A7U4JAR3_9SPHN)

HSP 1 Score: 444 bits (1141), Expect = 1.460e-155
Identity = 207/232 (89.22%), Postives = 218/232 (93.97%), Query Frame = 1 
Query:    1 VCMLPQSPEADMTSSIAELERCV-GMGFVGCNLNPDPGGGKFEHPPLTDKFWYPFYEKMVELDMPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQGDLFRDFPELRLIIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVYHQPGINLLADVIDNKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALDISDAERHAIFEGNARRVFPRLDAQLKERGL 693
            VCMLPQSP+AD+  SIAELERCV   GF+GCNLNPDPGGG F HPPLTD+FWYPFYEKMVELD+PAMIHVSGSCNPAMHATGAYYIAADTIAFMQL+QGDLFRDFP LR+IIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVYHQPGINLL DVID KNILFGSEMVGAVRGIDP TG YFDDTKRYVDALDI+D ++HAIFEGNARRVFPRLDA+LK RGL
Sbjct:  110 VCMLPQSPKADLQGSIAELERCVLERGFIGCNLNPDPGGGHFAHPPLTDRFWYPFYEKMVELDVPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLLQGDLFRDFPTLRMIIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVYHQPGINLLTDVIDTKNILFGSEMVGAVRGIDPTTGFYFDDTKRYVDALDIADGDKHAIFEGNARRVFPRLDAKLKARGL 341
[Close]
BLAST of mRNA_M-pyrifera_M_contig91957.21292.1 vs. uniprot
Match: A0A842I1I3_9SPHN (Amidohydrolase n=1 Tax=Parasphingopyxis marina TaxID=2761622 RepID=A0A842I1I3_9SPHN)

HSP 1 Score: 444 bits (1141), Expect = 1.460e-155
Identity = 203/232 (87.50%), Postives = 220/232 (94.83%), Query Frame = 1 
Query:    1 VCMLPQSPEADMTSSIAELERCVG-MGFVGCNLNPDPGGGKFEHPPLTDKFWYPFYEKMVELDMPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQGDLFRDFPELRLIIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVYHQPGINLLADVIDNKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALDISDAERHAIFEGNARRVFPRLDAQLKERGL 693
            VCMLPQSP+ADMT SIAELERCV  +GFVGCNLNPDPGGG+FEHPPLTD+FWYPFYEKM ELD+PAMIHVSGSCNP +HATGAYYIAADTIAFMQ IQGDLF+DFPELR IIPHGGGAVPYHWGRYRGLADMLKQP+LS H+MNNVYFDTCVYHQPG+NLLA+VID KNILFGSEMVGAVRGIDP+TG YFDDTKRYVDALD++D +RHAI+EGN RRV+PRLDAQLKERGL
Sbjct:  110 VCMLPQSPKADMTGSIAELERCVNELGFVGCNLNPDPGGGRFEHPPLTDRFWYPFYEKMCELDVPAMIHVSGSCNPGLHATGAYYIAADTIAFMQFIQGDLFKDFPELRFIIPHGGGAVPYHWGRYRGLADMLKQPELSGHVMNNVYFDTCVYHQPGVNLLAEVIDTKNILFGSEMVGAVRGIDPETGQYFDDTKRYVDALDLTDEQRHAIYEGNVRRVYPRLDAQLKERGL 341
[Close]
BLAST of mRNA_M-pyrifera_M_contig91957.21292.1 vs. uniprot
Match: A0A0Q8Q023_9SPHN (4-oxalomesaconate hydratase n=1 Tax=Sphingomonas sp. Root710 TaxID=1736594 RepID=A0A0Q8Q023_9SPHN)

HSP 1 Score: 443 bits (1140), Expect = 2.010e-155
Identity = 205/231 (88.74%), Postives = 217/231 (93.94%), Query Frame = 1 
Query:    1 VCMLPQSPEADMTSSIAELERCVGMGFVGCNLNPDPGGGKFEHPPLTDKFWYPFYEKMVELDMPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQGDLFRDFPELRLIIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVYHQPGINLLADVIDNKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALDISDAERHAIFEGNARRVFPRLDAQLKERGL 693
            VCMLPQSP ADM  SIAELERCV MGF+GCNLNPDPGGG F+HPPLTD+FWYPFYEKMVELD+PAMIHVSGSCNP +HATGAYYIAADTIAFMQLI+GDLF DFP LR IIPHGGGAVPYHWGRYRGLADMLK+P L+ HLMNNVYFDTCVYHQPGINLLADVI+NKNILFGSEMVGAVRGIDP+TG YFDDTKRY+DALDISDAER AIFEGNARRVFPRLDA+LK RGL
Sbjct:  110 VCMLPQSPAADMAGSIAELERCVDMGFIGCNLNPDPGGGHFKHPPLTDRFWYPFYEKMVELDVPAMIHVSGSCNPGLHATGAYYIAADTIAFMQLIEGDLFADFPSLRFIIPHGGGAVPYHWGRYRGLADMLKKPALTGHLMNNVYFDTCVYHQPGINLLADVIENKNILFGSEMVGAVRGIDPETGFYFDDTKRYIDALDISDAERSAIFEGNARRVFPRLDAELKARGL 340
[Close]
BLAST of mRNA_M-pyrifera_M_contig91957.21292.1 vs. uniprot
Match: Q2G4H3_NOVAD (4-oxalomesaconate hydratase n=48 Tax=Sphingomonadales TaxID=204457 RepID=Q2G4H3_NOVAD)

HSP 1 Score: 443 bits (1140), Expect = 2.080e-155
Identity = 207/232 (89.22%), Postives = 220/232 (94.83%), Query Frame = 1 
Query:    1 VCMLPQSPEADMTSSIAELERCVG-MGFVGCNLNPDPGGGKFEHPPLTDKFWYPFYEKMVELDMPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQGDLFRDFPELRLIIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVYHQPGINLLADVIDNKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALDISDAERHAIFEGNARRVFPRLDAQLKERGL 693
            VCMLPQSPEADMTSSIAELERCV  +GF+GCNLNPDPGGG F+HPPLTD++W+PFYEKMVELD+PAMIHVSGSCNPAMHATG YYIAADTIAFMQL++GDLF  FP LR IIPHGGGAVPYHWGRYRGLADMLK+P L THLMNNV+FDTCVYHQPGINLLADVI+NKNILFGSEMVGAVRGIDP TG YFDDTKRYVDALDISDAERHAIFEGNARRVFPRLDA+LKERGL
Sbjct:  110 VCMLPQSPEADMTSSIAELERCVNELGFIGCNLNPDPGGGHFKHPPLTDEYWFPFYEKMVELDVPAMIHVSGSCNPAMHATGGYYIAADTIAFMQLLEGDLFSRFPTLRFIIPHGGGAVPYHWGRYRGLADMLKKPGLDTHLMNNVFFDTCVYHQPGINLLADVIENKNILFGSEMVGAVRGIDPTTGFYFDDTKRYVDALDISDAERHAIFEGNARRVFPRLDAKLKERGL 341
[Close]
BLAST of mRNA_M-pyrifera_M_contig91957.21292.1 vs. uniprot
Match: A0A0Q4CBB5_9SPHN (4-oxalomesaconate hydratase n=1 Tax=Novosphingobium sp. Leaf2 TaxID=1735670 RepID=A0A0Q4CBB5_9SPHN)

HSP 1 Score: 442 bits (1137), Expect = 5.740e-155
Identity = 203/231 (87.88%), Postives = 218/231 (94.37%), Query Frame = 1 
Query:    1 VCMLPQSPEADMTSSIAELERCVGMGFVGCNLNPDPGGGKFEHPPLTDKFWYPFYEKMVELDMPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQGDLFRDFPELRLIIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVYHQPGINLLADVIDNKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALDISDAERHAIFEGNARRVFPRLDAQLKERGL 693
            VCMLPQSP ADM  SIAEL+RCV MGFVGCNLNPDPGGG F+HPPLTD FWYPFYEKMVELD+PAMIHVSGSCNP +HATGAYYIAADTIAFMQL++GDLF DFP LR IIPHGGGAVPYHWGRYRGLADMLK+P L+THLMNN++FDTCVYHQPGI+LLA+VI N+NILFGSEMVGAVRGIDP+TGHYFDDTKRYVDALDISDA+RHAIFEGNARRVFPRLDAQLK RGL
Sbjct:  110 VCMLPQSPSADMQGSIAELQRCVDMGFVGCNLNPDPGGGHFKHPPLTDPFWYPFYEKMVELDVPAMIHVSGSCNPGLHATGAYYIAADTIAFMQLLEGDLFADFPTLRFIIPHGGGAVPYHWGRYRGLADMLKKPALATHLMNNIFFDTCVYHQPGIDLLANVISNENILFGSEMVGAVRGIDPETGHYFDDTKRYVDALDISDAQRHAIFEGNARRVFPRLDAQLKARGL 340
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91957.21292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A220WA96_9SPHN1.470e-16493.07Amidohydrolase n=1 Tax=Sphingorhabdus sp. SMR4y Ta... [more]
A0A127MDF5_9SPHN4.010e-16292.214-oxalomesaconate hydratase n=3 Tax=Sphingomonadal... [more]
LIGJ_SPHSK7.260e-15689.222-keto-4-carboxy-3-hexenedioate hydratase n=11 Tax... [more]
A0A173L2S5_9SPHN7.260e-15687.934-oxalmesaconate hydratase n=114 Tax=Bacteria TaxI... [more]
A0A4Q3APX8_9SPHN8.890e-15687.88Amidohydrolase (Fragment) n=1 Tax=Sphingomonadales... [more]
A0A7U4JAR3_9SPHN1.460e-15589.224-oxalomesaconate hydratase n=1 Tax=Sphingomonas h... [more]
A0A842I1I3_9SPHN1.460e-15587.50Amidohydrolase n=1 Tax=Parasphingopyxis marina Tax... [more]
A0A0Q8Q023_9SPHN2.010e-15588.744-oxalomesaconate hydratase n=1 Tax=Sphingomonas s... [more]
Q2G4H3_NOVAD2.080e-15589.224-oxalomesaconate hydratase n=48 Tax=Sphingomonada... [more]
A0A0Q4CBB5_9SPHN5.740e-15587.884-oxalomesaconate hydratase n=1 Tax=Novosphingobiu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91957contigM-pyrifera_M_contig91957:77..772 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score455.7
Seed ortholog evalue1.3e-125
Seed eggNOG ortholog13689.BV96_00595
Preferred nameligJ
KEGG rclassRC00498
KEGG koko:K10220
KEGG ReactionR04478
KEGG Pathwayko00362,ko01120,map00362,map01120
Hectar predicted targeting categoryother localisation
EggNOG free text desc.4-oxalomesaconate hydratase
EggNOG OGs1MVHB@1224,2K11J@204457,2TVM0@28211,COG2159@1,COG2159@2
EC4.2.1.83
COG Functional cat.S
Best tax levelSphingomonadales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size696
Cds size690
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816832.513868-CDS-M-pyrifera_M_contig91957:76..7661622816832.513868-CDS-M-pyrifera_M_contig91957:76..766Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91957 77..766 -
1692278204.838803-CDS-M-pyrifera_M_contig91957:76..7661692278204.838803-CDS-M-pyrifera_M_contig91957:76..766Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91957 77..766 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816832.5252855-UTR-M-pyrifera_M_contig91957:766..7721622816832.5252855-UTR-M-pyrifera_M_contig91957:766..772Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig91957 767..772 -
1692278204.8543017-UTR-M-pyrifera_M_contig91957:766..7721692278204.8543017-UTR-M-pyrifera_M_contig91957:766..772Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig91957 767..772 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91957.21292.1prot_M-pyrifera_M_contig91957.21292.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91957 77..766 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91957.21292.1

>prot_M-pyrifera_M_contig91957.21292.1 ID=prot_M-pyrifera_M_contig91957.21292.1|Name=mRNA_M-pyrifera_M_contig91957.21292.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp
MLPQSPEADMTSSIAELERCVGMGFVGCNLNPDPGGGKFEHPPLTDKFWY
PFYEKMVELDMPAMIHVSGSCNPAMHATGAYYIAADTIAFMQLIQGDLFR
DFPELRLIIPHGGGAVPYHWGRYRGLADMLKQPDLSTHLMNNVYFDTCVY
HQPGINLLADVIDNKNILFGSEMVGAVRGIDPQTGHYFDDTKRYVDALDI
SDAERHAIFEGNARRVFPRLDAQLKERGL*
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mRNA from alignment at M-pyrifera_M_contig91957:77..772-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91957.21292.1 ID=mRNA_M-pyrifera_M_contig91957.21292.1|Name=mRNA_M-pyrifera_M_contig91957.21292.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig91957:77..772- (Macrocystis pyrifera P11B4 male)
GTTTGCATGCTGCCGCAATCGCCCGAAGCGGACATGACATCGAGTATCGC
CGAGCTCGAGCGCTGCGTCGGCATGGGCTTTGTCGGCTGTAATCTCAATC
CCGATCCGGGCGGCGGCAAGTTCGAGCATCCGCCTTTGACCGACAAATTC
TGGTATCCCTTTTACGAGAAGATGGTCGAACTGGACATGCCGGCAATGAT
CCATGTCTCGGGCAGCTGCAATCCGGCAATGCACGCAACCGGTGCCTATT
ATATCGCAGCCGACACAATCGCCTTCATGCAGCTCATTCAAGGCGACCTG
TTCAGGGACTTTCCGGAATTGCGCCTGATCATTCCGCACGGAGGCGGCGC
GGTTCCCTATCACTGGGGCCGGTATCGCGGGCTTGCCGACATGCTGAAGC
AGCCCGATCTTTCGACCCACCTGATGAACAATGTCTATTTCGACACTTGT
GTCTATCACCAGCCAGGCATCAATCTGCTGGCTGATGTCATCGACAACAA
GAATATCCTGTTCGGCAGCGAGATGGTCGGCGCTGTGCGCGGTATCGATC
CGCAAACCGGCCATTATTTCGACGACACCAAACGCTATGTCGATGCGCTC
GATATATCCGATGCAGAACGCCATGCCATATTTGAAGGCAATGCCCGTCG
TGTCTTCCCGCGGCTGGATGCGCAGTTGAAGGAGCGAGGGCTGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91957:77..772-

>mRNA_M-pyrifera_M_contig91957.21292.1 ID=mRNA_M-pyrifera_M_contig91957.21292.1|Name=mRNA_M-pyrifera_M_contig91957.21292.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1380bp|location=Sequence derived from alignment at M-pyrifera_M_contig91957:77..772- (Macrocystis pyrifera P11B4 male)
ATGCTGCCGCAATCGCCCGAAGCGGACATGACATCGAGTATCGCCGAGCT
CGAGCGCTGCGTCGGCATGGGCTTTGTCGGCTGTAATCTCAATCCCGATC
CGGGCGGCGGCAAGTTCGAGCATCCGCCTTTGACCGACAAATTCTGGTAT
CCCTTTTACGAGAAGATGGTCGAACTGGACATGCCGGCAATGATCCATGT
CTCGGGCAGCTGCAATCCGGCAATGCACGCAACCGGTGCCTATTATATCG
CAGCCGACACAATCGCCTTCATGCAGCTCATTCAAGGCGACCTGTTCAGG
GACTTTCCGGAATTGCGCCTGATCATTCCGCACGGAGGCGGCGCGGTTCC
CTATCACTGGGGCCGGTATCGCGGGCTTGCCGACATGCTGAAGCAGCCCG
ATCTTTCGACCCACCTGATGAACAATGTCTATTTCGACACTTGTGTCTAT
CACCAGCCAGGCATCAATCTGCTGGCTGATGTCATCGACAACAAGAATAT
CCTGTTCGGCAGCGAGATGGTCGGCGCTGTGCGCGGTATCGATCCGCAAA
CCGGCCATTATTTCGACGACACCAAACGCTATGTCGATGCGCTCGATATA
TCCGATGCAGAACGCCATGCCATATTTGAAGGCAATGCCCGTCGTGTCTT
CCCGCGGCTGGATGCGCAGTTGAAGGAGCGAGGGCTGTGAATGCTGCCGC
AATCGCCCGAAGCGGACATGACATCGAGTATCGCCGAGCTCGAGCGCTGC
GTCGGCATGGGCTTTGTCGGCTGTAATCTCAATCCCGATCCGGGCGGCGG
CAAGTTCGAGCATCCGCCTTTGACCGACAAATTCTGGTATCCCTTTTACG
AGAAGATGGTCGAACTGGACATGCCGGCAATGATCCATGTCTCGGGCAGC
TGCAATCCGGCAATGCACGCAACCGGTGCCTATTATATCGCAGCCGACAC
AATCGCCTTCATGCAGCTCATTCAAGGCGACCTGTTCAGGGACTTTCCGG
AATTGCGCCTGATCATTCCGCACGGAGGCGGCGCGGTTCCCTATCACTGG
GGCCGGTATCGCGGGCTTGCCGACATGCTGAAGCAGCCCGATCTTTCGAC
CCACCTGATGAACAATGTCTATTTCGACACTTGTGTCTATCACCAGCCAG
GCATCAATCTGCTGGCTGATGTCATCGACAACAAGAATATCCTGTTCGGC
AGCGAGATGGTCGGCGCTGTGCGCGGTATCGATCCGCAAACCGGCCATTA
TTTCGACGACACCAAACGCTATGTCGATGCGCTCGATATATCCGATGCAG
AACGCCATGCCATATTTGAAGGCAATGCCCGTCGTGTCTTCCCGCGGCTG
GATGCGCAGTTGAAGGAGCGAGGGCTGTGA
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