mRNA_M-pyrifera_M_contig9194.21287.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9194.21287.1 vs. uniprot
Match: D8LJW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW1_ECTSI) HSP 1 Score: 292 bits (747), Expect = 8.770e-89 Identity = 147/173 (84.97%), Postives = 160/173 (92.49%), Query Frame = 1 Query: 1 GLVARSSLLEPAMVPYLASLRCFVTLACPHLGQSSTPLSFFKTGAWAVRKLTGLRVLHELDLDDADDPRETTLYRLSFSPGLERFRTIVFAANPRDGFVPLHSAAVRSPPDVEARSS---RTVGVSAEMAKMLMSKAQGALDTVIGRAGHMCFIESPQVAWLISLALLPFMEE 510 GLVARS+LLEPAMVPYL S++CFVTLACPHLGQ+STPLSFFKTGAWAVRKLTGL+VLHELDLDDADDPRET LYRLS SPGLERFRTIVFAANPRDGFVPLHSA+VR+PP+ +A S T VSAEMA+MLMSK+QGALDTVIGRAGHMCFIES QVAWL+SLALLPF+EE Sbjct: 1121 GLVARSALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDADDPRETALYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPPEGDAGGSSAGHTSAVSAEMAEMLMSKSQGALDTVIGRAGHMCFIESSQVAWLVSLALLPFLEE 1293
BLAST of mRNA_M-pyrifera_M_contig9194.21287.1 vs. uniprot
Match: A0A6H5K5M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M7_9PHAE) HSP 1 Score: 281 bits (718), Expect = 2.660e-85 Identity = 147/194 (75.77%), Postives = 161/194 (82.99%), Query Frame = 1 Query: 1 GLVARSSLLEPAMVPYLASLRCFVTLACPHLGQSSTPLSFFKTGAWAVRKLTGLRVLHELDLDDADDPRETTLYRLSFSPGLERFRTIVFAANPRDGFVPLHSAAVRSPPDVEARSS---RTVGVSAEMAKMLMSK--------------------AQGALDTVIGRAGHMCFIESPQVAWLISLALLPFMEEK 513 GLVARS+LLEPAMVPYL S++CFVTLACPHLGQ+STPLSFFKTGAWAVRKLTGL+VLHELDLDDADDPRET LYRLS SPGLERFRTIVFAANPRDGFVPLHSA+VR+PP+ +A S T VSAEMA+MLMSK +QGALDTVIGRAGHMCFIES QVAWL+SLALLPF+EE+ Sbjct: 922 GLVARSALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDADDPRETALYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPPEGDAGGSSAGHTSAVSAEMAEMLMSKVSESANRVVRMTLDAPRNRQSQGALDTVIGRAGHMCFIESSQVAWLVSLALLPFLEER 1115
BLAST of mRNA_M-pyrifera_M_contig9194.21287.1 vs. uniprot
Match: A0A6V1VCI1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VCI1_HETAK) HSP 1 Score: 104 bits (260), Expect = 3.070e-24 Identity = 72/184 (39.13%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 1 GLVARSSLLEPAMVPYLASLRCFVTLACPHLGQSSTPLSFFKTGAWAVRKLTGLRVLHELDLDDADDPRETTLYRLSFSPGLERFRTIVFAANPRDGFVPLHSAAVRSPPDVEARSSRTVGVSAEMAKMLMSK-AQGAL--------------DTVIGRAGHMCFIESPQVAWLISLALLPFME 507 LV R++L A+ +L L F++L+ PHLG + KTG WA+R +RVL EL+L DA+ P ETTLY+LS +PGL FR + + RD +VP +SA V+ + A V +MA LMS+ A GA+ +TVIGRA H+ ++ SPQV I+L L F + Sbjct: 89 SLVIRAALASRALSLFLPRLHAFLSLSSPHLGCPYSASGLIKTGMWALRTFMKVRVLEELELKDAEHPTETTLYKLSQTPGLGLFRHVALVSAHRDKYVPAYSARVQVCREAGADFVHGPAV-IDMAANLMSEVAPGAVAHLDLDHVFEGLSVNTVIGRAAHLSYLNSPQV---INLLLFTFYD 268
BLAST of mRNA_M-pyrifera_M_contig9194.21287.1 vs. uniprot
Match: K3Y584_SETIT (DUF676 domain-containing protein n=31 Tax=PACMAD clade TaxID=147370 RepID=K3Y584_SETIT) HSP 1 Score: 103 bits (257), Expect = 1.780e-22 Identity = 58/182 (31.87%), Postives = 95/182 (52.20%), Query Frame = 1 Query: 1 GLVARSSLLEPAMVPYLASLRCFVTLACPHLGQSSTPLSFFKTGAWAVRKLTGLRVLHELDLDDADDPRETTLYRLSFSPGLERFRTIVFAANPRDGFVPLHSAAVRSPPDVEARSSRTVGVSAEMAKMLMSKAQG----------------------ALDTVIGRAGHMCFIESPQVAWLI 480 ++ RS+L EPA+ PYL +L +++++ PHLG + S F +G W ++KL G + +H+L D DP+ T Y+L LE F+ I+ ++P+DG+VP HSA + P + +SR V EM + + + +L+T+IGRA H+ F+E+ A I Sbjct: 621 NIIIRSALAEPALQPYLKNLHTYMSISGPHLGYWYSSNSLFNSGLWLLKKLKGAQCIHQLTFSDDQDPQNTYFYKLCKLKTLENFKNIILLSSPQDGYVPYHSARIELCPAASSDTSRKGQVFTEMLNNCLDQIRAPSSDTRIFMRCDVNFDQSNQGRSLNTMIGRAAHIEFLETDLYAKFI 802
BLAST of mRNA_M-pyrifera_M_contig9194.21287.1 vs. uniprot
Match: A0A804N6S8_MAIZE (DUF676 domain-containing protein n=4 Tax=Zea mays TaxID=4577 RepID=A0A804N6S8_MAIZE) HSP 1 Score: 100 bits (249), Expect = 2.060e-21 Identity = 59/182 (32.42%), Postives = 96/182 (52.75%), Query Frame = 1 Query: 1 GLVARSSLLEPAMVPYLASLRCFVTLACPHLGQSSTPLSFFKTGAWAVRKLTGLRVLHELDLDDADDPRETTLYRLSFSPGLERFRTIVFAANPRDGFVPLHSAAVRSPPDVEARSSRTVGVSAEMAKMLMSKA---------------------QG-ALDTVIGRAGHMCFIESPQVAWLI 480 ++ RS+L EPA+ PYL +L +++++ PHLG + S F +G W ++KL G + +H+L D DP+ T Y+L LE F+ I+ ++P+DG+VP HSA + P + +S+ V EM + + QG +L+T+IGRA H+ F+E+ A I Sbjct: 519 NVIIRSALAEPALQPYLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLLKKLKGAQCIHQLTFSDDQDPQNTYFYKLCKLKTLENFQNIILLSSPQDGYVPYHSARIELCPAASSDTSKKGQVFTEMLNNCLDQIRTPSSDTRTFMRCDVNFDQSNQGRSLNTMIGRAAHIEFLETDLYAKFI 700
BLAST of mRNA_M-pyrifera_M_contig9194.21287.1 vs. uniprot
Match: A0A0Q3ESP0_BRADI (DUF676 domain-containing protein n=6 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3ESP0_BRADI) HSP 1 Score: 100 bits (249), Expect = 2.070e-21 Identity = 56/182 (30.77%), Postives = 94/182 (51.65%), Query Frame = 1 Query: 1 GLVARSSLLEPAMVPYLASLRCFVTLACPHLGQSSTPLSFFKTGAWAVRKLTGLRVLHELDLDDADDPRETTLYRLSFSPGLERFRTIVFAANPRDGFVPLHSAAVRSPPDVEARSSRTVGVSAEMAKMLMSKAQGA----------------------LDTVIGRAGHMCFIESPQVAWLI 480 ++ RS+L EP + PYL +L +++++ PHLG + S F +G W +++L GL+ +H+L D DP+ T Y+L LE F+ I+ ++P+DG+VP HSA + P + SS+ V EM + + + L+T++GRA H+ F+E+ A I Sbjct: 538 NIIIRSALSEPKLQPYLRNLYTYMSISGPHLGYWYSSNSLFNSGLWLMKRLKGLQCMHQLTFTDEQDPQNTFFYKLCELKTLENFKNIILVSSPQDGYVPYHSARIDLCPASSSDSSKKGQVFTEMLNNCLDQIRAPSSEERVFMRCDVSFDQSAQRRDLNTIVGRAAHVEFLENDMYARFI 719
BLAST of mRNA_M-pyrifera_M_contig9194.21287.1 vs. uniprot
Match: A0A0P0XZ90_ORYSJ (Os11g0167500 protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0XZ90_ORYSJ) HSP 1 Score: 97.1 bits (240), Expect = 4.290e-21 Identity = 54/184 (29.35%), Postives = 96/184 (52.17%), Query Frame = 1 Query: 1 GLVARSSLLEPAMVPYLASLRCFVTLACPHLGQSSTPLSFFKTGAWAVRKLTGLRVLHELDLDDADDPRETTLYRLSFSPGLERFRTIVFAANPRDGFVPLHSAAVRSPPDVEARSSRTVGVSAEMAKMLMSKAQG------------------------ALDTVIGRAGHMCFIESPQVAWLI 480 ++ RS+L +P M P+L +L +++++ PHLG + S F +G W +++L G++ +H+L D DP+ T Y+L L+ F+ I+ ++P+DG+VP HSA + S P + +S+ V EM + + + +L+T+IGRA H+ F+E+ A I Sbjct: 108 NIIIRSALADPKMQPFLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLMKRLKGVQCMHQLTFSDEQDPQNTFFYKLCKLNTLDNFKNIILVSSPQDGYVPYHSARIDSCPASSSDNSKKGQVFTEMLNNCLDQLRAPSSETRVFMRCDVSFDQSSHGRRRSLNTMIGRAAHIEFLENDLYARFI 291
BLAST of mRNA_M-pyrifera_M_contig9194.21287.1 vs. uniprot
Match: A0A8J5WD90_ZIZPA (DUF676 domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WD90_ZIZPA) HSP 1 Score: 99.4 bits (246), Expect = 4.680e-21 Identity = 55/182 (30.22%), Postives = 94/182 (51.65%), Query Frame = 1 Query: 1 GLVARSSLLEPAMVPYLASLRCFVTLACPHLGQSSTPLSFFKTGAWAVRKLTGLRVLHELDLDDADDPRETTLYRLSFSPGLERFRTIVFAANPRDGFVPLHSAAVRSPPDVEARSSRTVGVSAEMAKMLMSKAQG----------------------ALDTVIGRAGHMCFIESPQVAWLI 480 ++ RS+L EP M P+L +L +++++ PHLG + S F +G W +++L G++ +H+L D DP+ T YRL L+ F+ I+ ++P+DG+VP HSA + P + +S V EM + + + +L+T+IGRA H+ F+E+ A I Sbjct: 380 NIIIRSALAEPKMQPFLKNLHTYMSISGPHLGYWYSSNSLFNSGLWLMKRLKGVQCMHQLTFSDEQDPKNTFFYRLCKMKTLDNFKNIILVSSPQDGYVPYHSARIDLCPASSSDNSMKGQVFTEMLNNCLDQIRAPSSETRVFMRCDVNFDQSSHARSLNTMIGRAAHIEFLENDMYARFI 561
BLAST of mRNA_M-pyrifera_M_contig9194.21287.1 vs. uniprot
Match: B8BJA8_ORYSI (DUF676 domain-containing protein n=4 Tax=Oryza TaxID=4527 RepID=B8BJA8_ORYSI) HSP 1 Score: 97.1 bits (240), Expect = 3.230e-20 Identity = 54/184 (29.35%), Postives = 96/184 (52.17%), Query Frame = 1 Query: 1 GLVARSSLLEPAMVPYLASLRCFVTLACPHLGQSSTPLSFFKTGAWAVRKLTGLRVLHELDLDDADDPRETTLYRLSFSPGLERFRTIVFAANPRDGFVPLHSAAVRSPPDVEARSSRTVGVSAEMAKMLMSKAQG------------------------ALDTVIGRAGHMCFIESPQVAWLI 480 ++ RS+L +P M P+L +L +++++ PHLG + S F +G W +++L G++ +H+L D DP+ T Y+L L+ F+ I+ ++P+DG+VP HSA + S P + +S+ V EM + + + +L+T+IGRA H+ F+E+ A I Sbjct: 454 NIIIRSALADPKMQPFLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLMKRLKGVQCMHQLTFSDEQDPQNTFFYKLCKLNTLDNFKNIILVSSPQDGYVPYHSARIDSCPASSSDNSKKGQVFTEMLNNCLDQLRAPSSETRVFMRCDVSFDQSSHGRRRSLNTMIGRAAHIEFLENDLYARFI 637
BLAST of mRNA_M-pyrifera_M_contig9194.21287.1 vs. uniprot
Match: UPI00077626D4 (uncharacterized protein LOC102699930 isoform X2 n=2 Tax=Oryza brachyantha TaxID=4533 RepID=UPI00077626D4) HSP 1 Score: 97.1 bits (240), Expect = 3.330e-20 Identity = 56/184 (30.43%), Postives = 94/184 (51.09%), Query Frame = 1 Query: 1 GLVARSSLLEPAMVPYLASLRCFVTLACPHLGQSSTPLSFFKTGAWAVRKLTGLRVLHELDLDDADDPRETTLYRLSFSPGLERFRTIVFAANPRDGFVPLHSAAVRSPPDVEARSSRTVGVSAEMAKMLMSKAQG------------------------ALDTVIGRAGHMCFIESPQVAWLI 480 ++ RS+L EP M P+L +L +++++ PHLG + S F +G W +++L G++ +H+L D DP+ T YRL L+ F+ I+ ++P+DG+VP HSA + P + SS V EM + + + +L+T+IGRA H+ F+E+ A I Sbjct: 534 NIIIRSALAEPKMQPFLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLMKRLKGVQCMHQLTFSDEQDPQNTFFYRLCKLKTLDSFKNIILVSSPQDGYVPYHSARIDICPASSSDSSTRGQVFTEMLNNCLDQIRAPSSEMRVFMRCDVSFDQSSHGRRRSLNTMIGRAAHIEFLENDLYARFI 717 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9194.21287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9194.21287.1 >prot_M-pyrifera_M_contig9194.21287.1 ID=prot_M-pyrifera_M_contig9194.21287.1|Name=mRNA_M-pyrifera_M_contig9194.21287.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp GLVARSSLLEPAMVPYLASLRCFVTLACPHLGQSSTPLSFFKTGAWAVRKback to top mRNA from alignment at M-pyrifera_M_contig9194:176..2214+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9194.21287.1 ID=mRNA_M-pyrifera_M_contig9194.21287.1|Name=mRNA_M-pyrifera_M_contig9194.21287.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2039bp|location=Sequence derived from alignment at M-pyrifera_M_contig9194:176..2214+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9194:176..2214+ >mRNA_M-pyrifera_M_contig9194.21287.1 ID=mRNA_M-pyrifera_M_contig9194.21287.1|Name=mRNA_M-pyrifera_M_contig9194.21287.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig9194:176..2214+ (Macrocystis pyrifera P11B4 male)back to top |