mRNA_M-pyrifera_M_contig9169.21238.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9169.21238.1 vs. uniprot
Match: D7FJ97_ECTSI (Thylakoid lumenal protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ97_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 4.940e-22 Identity = 96/109 (88.07%), Postives = 99/109 (90.83%), Query Frame = 1 Query: 1 SEKSAAGFDLSGVIASEANFSKGDFKEVVMSKSYARNSKWDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTDSYMGDFDQKNLCKNPTLKGTNP 327 S KSAAGFDLSGVIASEANFSKGDFKEVVMSK+YAR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T++YMGDFDQKNLCKNPTLKGTNP Sbjct: 76 SGKSAAGFDLSGVIASEANFSKGDFKEVVMSKAYARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNP 184
BLAST of mRNA_M-pyrifera_M_contig9169.21238.1 vs. uniprot
Match: A0A836CB03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB03_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.520e-16 Identity = 91/109 (83.49%), Postives = 96/109 (88.07%), Query Frame = 1 Query: 1 SEKSAAGFDLSGVIASEANFSKGDFKEVVMSKSYARNSKWDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTDSYMGDFDQKNLCKNPTLKGTNP 327 S KSAA DLSGVIASEANFSK DFKE +SK+YARNSK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFT++ MGDFD K+LCKNPTLKG NP Sbjct: 111 SGKSAALSDLSGVIASEANFSKVDFKEAQLSKAYARNSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTEAAMGDFDLKSLCKNPTLKGENP 219
BLAST of mRNA_M-pyrifera_M_contig9169.21238.1 vs. uniprot
Match: A0A7S0EIA2_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EIA2_9CRYP) HSP 1 Score: 74.3 bits (181), Expect = 7.100e-14 Identity = 77/109 (70.64%), Postives = 89/109 (81.65%), Query Frame = 1 Query: 1 SEKSAAGFDLSGVIASEANFSKGDFKEVVMSKSYARNSKWDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTDSYMGDFDQKNLCKNPTLKGTNP 327 S K A GFDL+G + + +FSK FK+ VMSK +A + +DGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DF+D+YMGDFD K +CKNPTL+GTNP Sbjct: 115 SGKDATGFDLAGALMQKGDFSKVKFKDAVMSKVFANEATFDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTDADFSDTYMGDFDNKKICKNPTLQGTNP 223
BLAST of mRNA_M-pyrifera_M_contig9169.21238.1 vs. uniprot
Match: L1ICC6_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1ICC6_GUITC) HSP 1 Score: 73.2 bits (178), Expect = 1.940e-13 Identity = 72/107 (67.29%), Postives = 84/107 (78.50%), Query Frame = 1 Query: 7 KSAAGFDLSGVIASEANFSKGDFKEVVMSKSYARNSKWDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTDSYMGDFDQKNLCKNPTLKGTNP 327 K A GFDL+G + + +FSK FK+ VMSK +A + +DGAXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX DF+D+YMGDFD K +CKNPTL+GTNP Sbjct: 117 KDATGFDLAGALMQKGDFSKVKFKDAVMSKVFADEATFDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEFXXXXLTDSDFSDTYMGDFDNKKICKNPTLQGTNP 223
BLAST of mRNA_M-pyrifera_M_contig9169.21238.1 vs. uniprot
Match: A0A7S2WC40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC40_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 8.330e-13 Identity = 80/107 (74.77%), Postives = 91/107 (85.05%), Query Frame = 1 Query: 7 KSAAGFDLSGVIASEANFSKGDFKEVVMSKSYARNSKWDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTDSYMGDFDQKNLCKNPTLKGTNP 327 KSA GFDLSG+IASEA F +FK+ +SKS+ R+S + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DF++SY+GDFD + LCKNPTLKG NP Sbjct: 82 KSAEGFDLSGLIASEAQFENVNFKDAQLSKSFLRDSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDFSESYLGDFDLRKLCKNPTLKGENP 188
BLAST of mRNA_M-pyrifera_M_contig9169.21238.1 vs. uniprot
Match: A0A7S2WDI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDI2_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.860e-12 Identity = 80/107 (74.77%), Postives = 91/107 (85.05%), Query Frame = 1 Query: 7 KSAAGFDLSGVIASEANFSKGDFKEVVMSKSYARNSKWDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTDSYMGDFDQKNLCKNPTLKGTNP 327 KSA GFDLSG+IASEA F +FK+ +SKS+ R+S + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DF++SY+GDFD + LCKNPTLKG NP Sbjct: 138 KSAEGFDLSGLIASEAQFENVNFKDAQLSKSFLRDSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDFSESYLGDFDLRKLCKNPTLKGENP 244
BLAST of mRNA_M-pyrifera_M_contig9169.21238.1 vs. uniprot
Match: A0A7S2H4B8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2H4B8_9EUKA) HSP 1 Score: 69.3 bits (168), Expect = 4.590e-12 Identity = 72/109 (66.06%), Postives = 84/109 (77.06%), Query Frame = 1 Query: 1 SEKSAAGFDLSGVIASEANFSKGDFKEVVMSKSYARNSKWDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTDSYMGDFDQKNLCKNPTLKGTNP 327 SE +AAGFD+SG + + +FSK DFKE +SK YA +K+DG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DFT++Y+G FD + LCKNPTL G NP Sbjct: 102 SETNAAGFDISGALMANGDFSKVDFKEAQLSKVYAPGAKFDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEADLKDADFTEAYIGMFDLRKLCKNPTLDGENP 210
BLAST of mRNA_M-pyrifera_M_contig9169.21238.1 vs. uniprot
Match: A0A7S4IZ25_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IZ25_9EUKA) HSP 1 Score: 67.8 bits (164), Expect = 1.500e-11 Identity = 68/105 (64.76%), Postives = 80/105 (76.19%), Query Frame = 1 Query: 13 AAGFDLSGVIASEANFSKGDFKEVVMSKSYARNSKWDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTDSYMGDFDQKNLCKNPTLKGTNP 327 AA FD+SG + +E +FSK +FKE +SK YA + +DGA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DFTD+Y+GDFDQ+ LCKN +L G NP Sbjct: 94 AAAFDISGALMAEGDFSKVNFKETQLSKVYAPGANFDGADFTNGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDADFTDAYIGDFDQRKLCKNKSLNGENP 198
BLAST of mRNA_M-pyrifera_M_contig9169.21238.1 vs. uniprot
Match: A0A448ZE67_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZE67_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 8.210e-11 Identity = 80/109 (73.39%), Postives = 93/109 (85.32%), Query Frame = 1 Query: 1 SEKSAAGFDLSGVIASEANFSKGDFKEVVMSKSYARNSKWDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTDSYMGDFDQKNLCKNPTLKGTNP 327 S +SA GFDLSGVI +E + SK +F++ V SK Y R+S ++GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T++ +G+FD KNLCKNPTLKG NP Sbjct: 117 SGESAVGFDLSGVIMTETDVSKVNFQDAVFSKGYLRDSNFEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAAIGNFDLKNLCKNPTLKGENP 225
BLAST of mRNA_M-pyrifera_M_contig9169.21238.1 vs. uniprot
Match: A0A7S0LGG3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LGG3_9EUKA) HSP 1 Score: 65.9 bits (159), Expect = 8.820e-11 Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 1 Query: 10 SAAGFDLSGVIASEANFSKGDFKEVVMSKSYARNSKWDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTDSYMGDFDQKNLCKNPTLKGTNP 327 SAA D+SG + ++ +FSK DFKE +SK YA + +DG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FT++Y+G FDQ+ LCKNPTLKG NP Sbjct: 101 SAASLDISGALMAQGDFSKADFKEAQLSKVYAPGAVFDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYVGQFDQRKLCKNPTLKGENP 206 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9169.21238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9169.21238.1 >prot_M-pyrifera_M_contig9169.21238.1 ID=prot_M-pyrifera_M_contig9169.21238.1|Name=mRNA_M-pyrifera_M_contig9169.21238.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp SEKSAAGFDLSGVIASEANFSKGDFKEVVMSKSYARNSKWDGADFTNAVVback to top mRNA from alignment at M-pyrifera_M_contig9169:3092..6760- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9169.21238.1 ID=mRNA_M-pyrifera_M_contig9169.21238.1|Name=mRNA_M-pyrifera_M_contig9169.21238.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3669bp|location=Sequence derived from alignment at M-pyrifera_M_contig9169:3092..6760- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9169:3092..6760- >mRNA_M-pyrifera_M_contig9169.21238.1 ID=mRNA_M-pyrifera_M_contig9169.21238.1|Name=mRNA_M-pyrifera_M_contig9169.21238.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig9169:3092..6760- (Macrocystis pyrifera P11B4 male)back to top |