mRNA_M-pyrifera_M_contig91373.21177.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91373.21177.1
Unique NamemRNA_M-pyrifera_M_contig91373.21177.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A2D7RZ39_9ACTN (Peptide chain release factor 3 n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7RZ39_9ACTN)

HSP 1 Score: 450 bits (1158), Expect = 5.980e-155
Identity = 219/258 (84.88%), Postives = 241/258 (93.41%), Query Frame = 1
Query:    1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774
            DAGKTTLTEKFLLYGG LT+GAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYR+ VLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIE+QTRKLFEVCRDREIPIVTFINKWDRP  DPLELLDE+E+QL+LEPVP++WPVG+ +RFRG++DR   +FVRYTRTARGA +APEE V  ++A EEEGDLW EA+EG+ELLD + R FD+KRFEAGELSPVFFGSALTNFGVR+ILDAMVDLVPSPSP+
Sbjct:   21 DAGKTTLTEKFLLYGGVLTSGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYREKVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIESQTRKLFEVCRDREIPIVTFINKWDRPGRDPLELLDELEEQLILEPVPMNWPVGEADRFRGLVDRTNGDFVRYTRTARGADKAPEETVDPDRAEEEEGDLWREAQEGIELLDVMDRSFDRKRFEAGELSPVFFGSALTNFGVRMILDAMVDLVPSPSPR 278          
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A7K1ZAN9_9ACTN (Peptide chain release factor 3 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZAN9_9ACTN)

HSP 1 Score: 444 bits (1141), Expect = 2.190e-152
Identity = 217/258 (84.11%), Postives = 239/258 (92.64%), Query Frame = 1
Query:    1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774
            DAGKTTLTEKFLLYGG LT GAGSV+AKG  RS TSDWMELEQQRGISI+STVLQF YRD VLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIE QTRKLFEVCRDRE+PIVTFINKWDRPS DPL LLDEIE+QL+LEPVP++WPVGDGERFRG+IDR    F+R+TRTARGATEAPEE+V +++AA+EEGDLW EA +GVELLD+VGREFD K FE+GEL+PVFFGSALTNFGVRL+LDAMVDLVPSP+P+
Sbjct:   21 DAGKTTLTEKFLLYGGVLTAGAGSVRAKGSHRSTTSDWMELEQQRGISISSTVLQFGYRDCVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEKQTRKLFEVCRDREVPIVTFINKWDRPSRDPLGLLDEIEEQLILEPVPITWPVGDGERFRGLIDRRSGGFLRFTRTARGATEAPEELVDSDRAAQEEGDLWTEARDGVELLDSVGREFDAKLFESGELTPVFFGSALTNFGVRLLLDAMVDLVPSPTPR 278          
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A7K1YV97_9ACTN (Peptide chain release factor 3 n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1YV97_9ACTN)

HSP 1 Score: 393 bits (1009), Expect = 2.940e-132
Identity = 191/255 (74.90%), Postives = 220/255 (86.27%), Query Frame = 1
Query:    1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSP 765
            DAGKTTLTEKFLLYGGALT GAGSV+ KG+RR+  SDWME+E++RGIS+TS V+QF YRD VLNLLDTPGH DFSEDTYRVL+A DAA+MVLDG+KGIE+QTRKLFEVCR+REIPIVTFINKWDRP+ DPLELLDEIEDQLVL+PVPV+WPVG+GERF G++DR   +FVR+ RTA GAT A EEIV A +A  EEG  W EA E +EL+D    E D KRFEAGELSPVF+GSALTNFGVRL+LDA+V + P+P
Sbjct:   29 DAGKTTLTEKFLLYGGALTAGAGSVRGKGERRATASDWMEMERRRGISVTSAVVQFSYRDRVLNLLDTPGHGDFSEDTYRVLSAVDAAVMVLDGAKGIESQTRKLFEVCRNREIPIVTFINKWDRPARDPLELLDEIEDQLVLDPVPVTWPVGEGERFSGLVDRRDGDFVRFARTAGGATIAGEEIVEAARAEAEEGAAWHEAREALELIDAASAELDVKRFEAGELSPVFYGSALTNFGVRLLLDAIVAMAPAP 283          
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A520XU47_9ACTN (Peptide chain release factor 3 n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XU47_9ACTN)

HSP 1 Score: 388 bits (996), Expect = 8.950e-130
Identity = 194/258 (75.19%), Postives = 219/258 (84.88%), Query Frame = 1
Query:    1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774
            DAGKTTLTEKFLLYGGAL + AGSVKA+  RRSATSDWMELEQQRGISITSTVLQFPYRDHV+NLLDTPGHRDFSEDTYRVLAA DAA+MVLD +KGIE QT KLFEVCRDREIPI++FINKWDRPSL PLE+LD+IE QL L P P+SWPVG  E FRGV+D+   +FVR+TRTARGAT APEEIV  + A  EEG ++ EA E + LL+ VG E+D+  F AG  +PVFFGSALTNFGVRL+LDA+VDL PSP P+
Sbjct:   69 DAGKTTLTEKFLLYGGALGSEAGSVKARSGRRSATSDWMELEQQRGISITSTVLQFPYRDHVVNLLDTPGHRDFSEDTYRVLAAADAAVMVLDAAKGIEPQTLKLFEVCRDREIPILSFINKWDRPSLQPLEILDDIEKQLSLTPTPLSWPVGSAEGFRGVLDQRTGDFVRFTRTARGATMAPEEIVPPDAARLEEGHIYEEAVEELGLLEAVGAEYDEDTFLAGITTPVFFGSALTNFGVRLLLDAVVDLTPSPQPK 326          
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A7Y3BX93_9ACTN (Peptide chain release factor 3 n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3BX93_9ACTN)

HSP 1 Score: 384 bits (986), Expect = 7.820e-129
Identity = 190/258 (73.64%), Postives = 216/258 (83.72%), Query Frame = 1
Query:    1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774
            DAGKTTLTEK LLY G LT GAGSVKAK  RRSATSDWM++E+QRGISITSTV+QFPY   V+NLLDTPGHRDFSEDT+RVLAA DAAIMVLD +KGIE QTRKLFEVCRDREIPIVTFINKWDRP LD LELLDEIE+ LVLEP PV+WPVG    F+GVIDR   +FVRYTRT RGAT APEE+V +  AA EEG+ W  A +G+ELLD VGR FD +RF +G  +PV+FGSALTNFGVR++L+ + D+VPSP P+
Sbjct:   27 DAGKTTLTEKLLLYSGFLTAGAGSVKAKQGRRSATSDWMDMERQRGISITSTVVQFPYDGKVMNLLDTPGHRDFSEDTFRVLAAADAAIMVLDAAKGIEPQTRKLFEVCRDREIPIVTFINKWDRPGLDALELLDEIEEVLVLEPAPVTWPVGYAGNFKGVIDRRSGDFVRYTRTDRGATVAPEEVVPSRIAASEEGEDWDAATDGIELLDAVGRSFDNERFVSGYQTPVYFGSALTNFGVRMMLEGLADVVPSPGPR 284          
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A6N9ETV8_9ACTN (Peptide chain release factor 3 n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9ETV8_9ACTN)

HSP 1 Score: 385 bits (988), Expect = 5.460e-128
Identity = 189/255 (74.12%), Postives = 213/255 (83.53%), Query Frame = 1
Query:    1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSP 765
            DAGKTTLTEKFLLYGG LT GAGSV+AKGDRR+  SDWMELE++RGIS+TS V+QF YRD VLNLLDTPGH DFSEDTYRVL+A DAA+MVLDG+KGIEAQTRKLFEVCR+REIPIVTFINKWDRP+ DPLELLDEIEDQLVL+PVPV+WPVG+GERF G+IDR    +VR++RTA GAT              EEG  W EA E VELLD  G E D KRFEAGELSPVFFGSALTN+GVR++LDA+V++ P P
Sbjct:  114 DAGKTTLTEKFLLYGGVLTAGAGSVRAKGDRRATASDWMELERRRGISVTSAVVQFRYRDRVLNLLDTPGHGDFSEDTYRVLSAVDAAVMVLDGAKGIEAQTRKLFEVCRNREIPIVTFINKWDRPARDPLELLDEIEDQLVLDPVPVTWPVGEGERFSGLIDRRAGHYVRFSRTAGGATAXXXXXXXXXXXXXEEGSAWHEAAEAVELLDGAGAELDVKRFEAGELSPVFFGSALTNYGVRMLLDAIVEMAPPP 368          
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A7X7D7Z5_9ACTN (Peptide chain release factor 3 n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D7Z5_9ACTN)

HSP 1 Score: 381 bits (979), Expect = 8.150e-128
Identity = 189/258 (73.26%), Postives = 216/258 (83.72%), Query Frame = 1
Query:    1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774
            DAGKTTLTEKFLLYGGAL  GAGSVKA+GDRRSATSDWME+EQQRGISITSTVLQFPYRD V+NLLDTPGHRDFSEDTYRVLAA DAA+MVLD +KGIE QT KLFEVC+ R++P++TFINKWDRP L+ LELLDEI+ ++ +   PV+WPVG    FRGVIDR    FVR+TRTARGATEAPEEIV  ++A  EEG  W  A E  ELL T+G +FD + F  GELSP FFGSALTNFGVRL+LDA++DL P+PSP+
Sbjct:   21 DAGKTTLTEKFLLYGGALAGGAGSVKARGDRRSATSDWMEMEQQRGISITSTVLQFPYRDCVVNLLDTPGHRDFSEDTYRVLAAADAAVMVLDAAKGIEPQTLKLFEVCKARQMPLLTFINKWDRPGLEALELLDEIDAKIGVTAAPVTWPVGIAGDFRGVIDRTTGRFVRFTRTARGATEAPEEIVEPDRAEAEEGASWTTAAEEAELLGTMGLDFDMELFLGGELSPTFFGSALTNFGVRLLLDAIIDLAPAPSPR 278          
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A5Q2RTS7_9ACTN (Peptide chain release factor 3 n=2 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RTS7_9ACTN)

HSP 1 Score: 380 bits (975), Expect = 1.450e-126
Identity = 185/258 (71.71%), Postives = 219/258 (84.88%), Query Frame = 1
Query:    1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774
            DAGKTTLTEKFLLYGGALT+ AGSVKAKG RRSATSDWMELEQ+RGISITSTVLQFPYRDHV+NLLDTPGHRDFSEDTYRVLAA DAA+MVLD +KGIE QT KLFEVCR+R++P++TFINKWDRP  DPLELLDEIE Q+ + P PV+WPVG    FRGVIDR   +F+R+TRTA GATEA EE+++ ++AAE EG+ W  A   +ELL+  G + D++ F AG  +PV+FGSALTNFGVRL+LD +VDL P+P+P+
Sbjct:   71 DAGKTTLTEKFLLYGGALTSEAGSVKAKGARRSATSDWMELEQKRGISITSTVLQFPYRDHVINLLDTPGHRDFSEDTYRVLAAADAAVMVLDAAKGIEPQTLKLFEVCRERDMPLLTFINKWDRPGRDPLELLDEIEAQIGVHPAPVTWPVGIAGDFRGVIDRRTGDFIRFTRTAGGATEAGEELLAPDEAAEREGEAWTAATGELELLEATGADVDEESFLAGISTPVYFGSALTNFGVRLMLDGVVDLAPAPAPR 328          
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: UPI001C6324E4 (peptide chain release factor 3 n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C6324E4)

HSP 1 Score: 378 bits (971), Expect = 1.740e-126
Identity = 181/258 (70.16%), Postives = 215/258 (83.33%), Query Frame = 1
Query:    1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774
            DAGKTTLTEKFLLYGGALTTGAG+VKA+  R++ TSDWME+E+QRGISITSTVLQFPYRDHV+NLLDTPGHRDFSEDTYRVLAA DAA+MVLD +KGIE QT KLFEVCR+RE+P++TFINKWDRP  D LEL+DE+E ++ + P PV+WPVG    FRGV+DR    +VR+TR ARGATEAPEEI+ A+ AA  EGD W +A + + LL  +  + D + F AGE SP FFGSALTNFGVRL+LDA+VDL PSP+P+
Sbjct:   30 DAGKTTLTEKFLLYGGALTTGAGAVKAREGRKAVTSDWMEMERQRGISITSTVLQFPYRDHVINLLDTPGHRDFSEDTYRVLAAADAAVMVLDAAKGIEPQTLKLFEVCRERELPLLTFINKWDRPGRDALELIDEVEQRIGVMPTPVTWPVGIPGDFRGVVDRRTGRYVRFTRVARGATEAPEEILDADDAAAREGDAWTQASDELSLLSEIRADHDDELFRAGETSPTFFGSALTNFGVRLLLDAVVDLAPSPAPR 287          
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A7W0QW15_9ACTN (Peptide chain release factor 3 n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7W0QW15_9ACTN)

HSP 1 Score: 374 bits (959), Expect = 1.100e-124
Identity = 184/254 (72.44%), Postives = 214/254 (84.25%), Query Frame = 1
Query:    1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPS 762
            DAGKTTLTEKFLLYGGAL+ GAG+VKA+GDRRSATSDWME+EQQRGISITSTVLQFPYRD V+NLLDTPGHRDFSEDTYRVLAA DAA+MVLD +KGIE QT KLFEV + R++P++TFINKWDRP L+ LELLDEIE ++ +   PV+WPVG    FRGVIDR   +FVR+TRTARGATEAPEE+V  ++AA EEGD W  A + VELL T G + D + F  GE+SP FFGSALTNFGVRL+LDA++DL P+
Sbjct:   29 DAGKTTLTEKFLLYGGALSGGAGAVKARGDRRSATSDWMEMEQQRGISITSTVLQFPYRDCVVNLLDTPGHRDFSEDTYRVLAAADAAVMVLDAAKGIEPQTLKLFEVVKARQMPLITFINKWDRPGLEALELLDEIEQKIGVVAAPVTWPVGIAGDFRGVIDRRSGDFVRFTRTARGATEAPEEVVEPDRAAVEEGDAWTVARDEVELLATSGLDHDDELFREGEMSPTFFGSALTNFGVRLLLDAVIDLAPA 282          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7RZ39_9ACTN5.980e-15584.88Peptide chain release factor 3 n=8 Tax=Acidimicrob... [more]
A0A7K1ZAN9_9ACTN2.190e-15284.11Peptide chain release factor 3 n=1 Tax=Acidimicrob... [more]
A0A7K1YV97_9ACTN2.940e-13274.90Peptide chain release factor 3 n=8 Tax=Acidimicrob... [more]
A0A520XU47_9ACTN8.950e-13075.19Peptide chain release factor 3 n=1 Tax=Acidimicrob... [more]
A0A7Y3BX93_9ACTN7.820e-12973.64Peptide chain release factor 3 n=2 Tax=Acidimicrob... [more]
A0A6N9ETV8_9ACTN5.460e-12874.12Peptide chain release factor 3 n=2 Tax=Acidimicrob... [more]
A0A7X7D7Z5_9ACTN8.150e-12873.26Peptide chain release factor 3 n=1 Tax=Acidimicrob... [more]
A0A5Q2RTS7_9ACTN1.450e-12671.71Peptide chain release factor 3 n=2 Tax=Actinomarin... [more]
UPI001C6324E41.740e-12670.16peptide chain release factor 3 n=1 Tax=Iamia sp. S... [more]
A0A7W0QW15_9ACTN1.100e-12472.44Peptide chain release factor 3 n=2 Tax=Acidimicrob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91373contigM-pyrifera_M_contig91373:2..775 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score351.3
Seed ortholog evalue3.9e-94
Seed eggNOG ortholog1229780.BN381_70063
Preferred nameprfC
KEGG koko:K02837,ko:K07133
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Class II release factor RF3, C-terminal domain
EggNOG OGs2GKQA@201174,3UX1H@52018,COG4108@1,COG4108@2
COG Functional cat.J
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012
Exons1
Model size774
Cds size774
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816826.430924-CDS-M-pyrifera_M_contig91373:1..7751622816826.430924-CDS-M-pyrifera_M_contig91373:1..775Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91373 2..775 +
1692278201.2095537-CDS-M-pyrifera_M_contig91373:1..7751692278201.2095537-CDS-M-pyrifera_M_contig91373:1..775Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91373 2..775 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91373.21177.1prot_M-pyrifera_M_contig91373.21177.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91373 2..775 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91373.21177.1

>prot_M-pyrifera_M_contig91373.21177.1 ID=prot_M-pyrifera_M_contig91373.21177.1|Name=mRNA_M-pyrifera_M_contig91373.21177.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=258bp
DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISIT
STVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEA
QTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSW
PVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLW
IEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVD
LVPSPSPQ
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mRNA from alignment at M-pyrifera_M_contig91373:2..775+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91373.21177.1 ID=mRNA_M-pyrifera_M_contig91373.21177.1|Name=mRNA_M-pyrifera_M_contig91373.21177.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig91373:2..775+ (Macrocystis pyrifera P11B4 male)
GACGCGGGCAAGACCACGCTGACCGAGAAGTTCCTTCTCTACGGCGGCGC GCTCACCACCGGGGCCGGTTCGGTGAAGGCCAAGGGCGATCGTCGCTCGG CGACCTCCGACTGGATGGAACTCGAGCAACAGCGCGGCATCTCGATCACC TCGACGGTGCTCCAGTTCCCGTATCGCGACCATGTGCTCAACCTGCTCGA CACGCCCGGTCACCGAGATTTCTCCGAAGACACCTACCGGGTGCTGGCCG CCACCGACGCGGCGATCATGGTGCTCGACGGTTCGAAGGGCATCGAGGCG CAGACCCGCAAGCTGTTCGAGGTCTGTCGCGACCGCGAGATCCCGATCGT CACCTTCATCAACAAGTGGGACCGACCCAGCCTCGACCCGCTGGAACTGC TCGACGAGATCGAGGACCAGCTCGTGCTCGAACCCGTGCCGGTCAGCTGG CCGGTCGGCGATGGCGAACGCTTCCGCGGTGTGATCGACCGCAACCGCAA CGAGTTCGTCCGCTACACCCGCACCGCCCGGGGGGCCACGGAGGCACCCG AGGAGATAGTGTCGGCCGAGCAGGCCGCCGAGGAGGAAGGCGACCTCTGG ATCGAAGCGGAGGAGGGGGTCGAGCTGCTCGACACCGTCGGGCGCGAGTT CGACCAGAAGCGTTTCGAAGCCGGCGAGCTCTCGCCCGTGTTCTTCGGGT CCGCCCTCACCAACTTCGGCGTGCGCCTCATCCTCGACGCCATGGTCGAC CTGGTCCCGTCGCCGAGCCCGCAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91373:2..775+

>mRNA_M-pyrifera_M_contig91373.21177.1 ID=mRNA_M-pyrifera_M_contig91373.21177.1|Name=mRNA_M-pyrifera_M_contig91373.21177.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1548bp|location=Sequence derived from alignment at M-pyrifera_M_contig91373:2..775+ (Macrocystis pyrifera P11B4 male)
GACGCGGGCAAGACCACGCTGACCGAGAAGTTCCTTCTCTACGGCGGCGC
GCTCACCACCGGGGCCGGTTCGGTGAAGGCCAAGGGCGATCGTCGCTCGG
CGACCTCCGACTGGATGGAACTCGAGCAACAGCGCGGCATCTCGATCACC
TCGACGGTGCTCCAGTTCCCGTATCGCGACCATGTGCTCAACCTGCTCGA
CACGCCCGGTCACCGAGATTTCTCCGAAGACACCTACCGGGTGCTGGCCG
CCACCGACGCGGCGATCATGGTGCTCGACGGTTCGAAGGGCATCGAGGCG
CAGACCCGCAAGCTGTTCGAGGTCTGTCGCGACCGCGAGATCCCGATCGT
CACCTTCATCAACAAGTGGGACCGACCCAGCCTCGACCCGCTGGAACTGC
TCGACGAGATCGAGGACCAGCTCGTGCTCGAACCCGTGCCGGTCAGCTGG
CCGGTCGGCGATGGCGAACGCTTCCGCGGTGTGATCGACCGCAACCGCAA
CGAGTTCGTCCGCTACACCCGCACCGCCCGGGGGGCCACGGAGGCACCCG
AGGAGATAGTGTCGGCCGAGCAGGCCGCCGAGGAGGAAGGCGACCTCTGG
ATCGAAGCGGAGGAGGGGGTCGAGCTGCTCGACACCGTCGGGCGCGAGTT
CGACCAGAAGCGTTTCGAAGCCGGCGAGCTCTCGCCCGTGTTCTTCGGGT
CCGCCCTCACCAACTTCGGCGTGCGCCTCATCCTCGACGCCATGGTCGAC
CTGGTCCCGTCGCCGAGCCCGCAGGACGCGGGCAAGACCACGCTGACCGA
GAAGTTCCTTCTCTACGGCGGCGCGCTCACCACCGGGGCCGGTTCGGTGA
AGGCCAAGGGCGATCGTCGCTCGGCGACCTCCGACTGGATGGAACTCGAG
CAACAGCGCGGCATCTCGATCACCTCGACGGTGCTCCAGTTCCCGTATCG
CGACCATGTGCTCAACCTGCTCGACACGCCCGGTCACCGAGATTTCTCCG
AAGACACCTACCGGGTGCTGGCCGCCACCGACGCGGCGATCATGGTGCTC
GACGGTTCGAAGGGCATCGAGGCGCAGACCCGCAAGCTGTTCGAGGTCTG
TCGCGACCGCGAGATCCCGATCGTCACCTTCATCAACAAGTGGGACCGAC
CCAGCCTCGACCCGCTGGAACTGCTCGACGAGATCGAGGACCAGCTCGTG
CTCGAACCCGTGCCGGTCAGCTGGCCGGTCGGCGATGGCGAACGCTTCCG
CGGTGTGATCGACCGCAACCGCAACGAGTTCGTCCGCTACACCCGCACCG
CCCGGGGGGCCACGGAGGCACCCGAGGAGATAGTGTCGGCCGAGCAGGCC
GCCGAGGAGGAAGGCGACCTCTGGATCGAAGCGGAGGAGGGGGTCGAGCT
GCTCGACACCGTCGGGCGCGAGTTCGACCAGAAGCGTTTCGAAGCCGGCG
AGCTCTCGCCCGTGTTCTTCGGGTCCGCCCTCACCAACTTCGGCGTGCGC
CTCATCCTCGACGCCATGGTCGACCTGGTCCCGTCGCCGAGCCCGCAG
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