mRNA_M-pyrifera_M_contig91373.21177.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A2D7RZ39_9ACTN (Peptide chain release factor 3 n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7RZ39_9ACTN) HSP 1 Score: 450 bits (1158), Expect = 5.980e-155 Identity = 219/258 (84.88%), Postives = 241/258 (93.41%), Query Frame = 1 Query: 1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774 DAGKTTLTEKFLLYGG LT+GAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYR+ VLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIE+QTRKLFEVCRDREIPIVTFINKWDRP DPLELLDE+E+QL+LEPVP++WPVG+ +RFRG++DR +FVRYTRTARGA +APEE V ++A EEEGDLW EA+EG+ELLD + R FD+KRFEAGELSPVFFGSALTNFGVR+ILDAMVDLVPSPSP+ Sbjct: 21 DAGKTTLTEKFLLYGGVLTSGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYREKVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIESQTRKLFEVCRDREIPIVTFINKWDRPGRDPLELLDELEEQLILEPVPMNWPVGEADRFRGLVDRTNGDFVRYTRTARGADKAPEETVDPDRAEEEEGDLWREAQEGIELLDVMDRSFDRKRFEAGELSPVFFGSALTNFGVRMILDAMVDLVPSPSPR 278
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A7K1ZAN9_9ACTN (Peptide chain release factor 3 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZAN9_9ACTN) HSP 1 Score: 444 bits (1141), Expect = 2.190e-152 Identity = 217/258 (84.11%), Postives = 239/258 (92.64%), Query Frame = 1 Query: 1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774 DAGKTTLTEKFLLYGG LT GAGSV+AKG RS TSDWMELEQQRGISI+STVLQF YRD VLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIE QTRKLFEVCRDRE+PIVTFINKWDRPS DPL LLDEIE+QL+LEPVP++WPVGDGERFRG+IDR F+R+TRTARGATEAPEE+V +++AA+EEGDLW EA +GVELLD+VGREFD K FE+GEL+PVFFGSALTNFGVRL+LDAMVDLVPSP+P+ Sbjct: 21 DAGKTTLTEKFLLYGGVLTAGAGSVRAKGSHRSTTSDWMELEQQRGISISSTVLQFGYRDCVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEKQTRKLFEVCRDREVPIVTFINKWDRPSRDPLGLLDEIEEQLILEPVPITWPVGDGERFRGLIDRRSGGFLRFTRTARGATEAPEELVDSDRAAQEEGDLWTEARDGVELLDSVGREFDAKLFESGELTPVFFGSALTNFGVRLLLDAMVDLVPSPTPR 278
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A7K1YV97_9ACTN (Peptide chain release factor 3 n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1YV97_9ACTN) HSP 1 Score: 393 bits (1009), Expect = 2.940e-132 Identity = 191/255 (74.90%), Postives = 220/255 (86.27%), Query Frame = 1 Query: 1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSP 765 DAGKTTLTEKFLLYGGALT GAGSV+ KG+RR+ SDWME+E++RGIS+TS V+QF YRD VLNLLDTPGH DFSEDTYRVL+A DAA+MVLDG+KGIE+QTRKLFEVCR+REIPIVTFINKWDRP+ DPLELLDEIEDQLVL+PVPV+WPVG+GERF G++DR +FVR+ RTA GAT A EEIV A +A EEG W EA E +EL+D E D KRFEAGELSPVF+GSALTNFGVRL+LDA+V + P+P Sbjct: 29 DAGKTTLTEKFLLYGGALTAGAGSVRGKGERRATASDWMEMERRRGISVTSAVVQFSYRDRVLNLLDTPGHGDFSEDTYRVLSAVDAAVMVLDGAKGIESQTRKLFEVCRNREIPIVTFINKWDRPARDPLELLDEIEDQLVLDPVPVTWPVGEGERFSGLVDRRDGDFVRFARTAGGATIAGEEIVEAARAEAEEGAAWHEAREALELIDAASAELDVKRFEAGELSPVFYGSALTNFGVRLLLDAIVAMAPAP 283
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A520XU47_9ACTN (Peptide chain release factor 3 n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XU47_9ACTN) HSP 1 Score: 388 bits (996), Expect = 8.950e-130 Identity = 194/258 (75.19%), Postives = 219/258 (84.88%), Query Frame = 1 Query: 1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774 DAGKTTLTEKFLLYGGAL + AGSVKA+ RRSATSDWMELEQQRGISITSTVLQFPYRDHV+NLLDTPGHRDFSEDTYRVLAA DAA+MVLD +KGIE QT KLFEVCRDREIPI++FINKWDRPSL PLE+LD+IE QL L P P+SWPVG E FRGV+D+ +FVR+TRTARGAT APEEIV + A EEG ++ EA E + LL+ VG E+D+ F AG +PVFFGSALTNFGVRL+LDA+VDL PSP P+ Sbjct: 69 DAGKTTLTEKFLLYGGALGSEAGSVKARSGRRSATSDWMELEQQRGISITSTVLQFPYRDHVVNLLDTPGHRDFSEDTYRVLAAADAAVMVLDAAKGIEPQTLKLFEVCRDREIPILSFINKWDRPSLQPLEILDDIEKQLSLTPTPLSWPVGSAEGFRGVLDQRTGDFVRFTRTARGATMAPEEIVPPDAARLEEGHIYEEAVEELGLLEAVGAEYDEDTFLAGITTPVFFGSALTNFGVRLLLDAVVDLTPSPQPK 326
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A7Y3BX93_9ACTN (Peptide chain release factor 3 n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3BX93_9ACTN) HSP 1 Score: 384 bits (986), Expect = 7.820e-129 Identity = 190/258 (73.64%), Postives = 216/258 (83.72%), Query Frame = 1 Query: 1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774 DAGKTTLTEK LLY G LT GAGSVKAK RRSATSDWM++E+QRGISITSTV+QFPY V+NLLDTPGHRDFSEDT+RVLAA DAAIMVLD +KGIE QTRKLFEVCRDREIPIVTFINKWDRP LD LELLDEIE+ LVLEP PV+WPVG F+GVIDR +FVRYTRT RGAT APEE+V + AA EEG+ W A +G+ELLD VGR FD +RF +G +PV+FGSALTNFGVR++L+ + D+VPSP P+ Sbjct: 27 DAGKTTLTEKLLLYSGFLTAGAGSVKAKQGRRSATSDWMDMERQRGISITSTVVQFPYDGKVMNLLDTPGHRDFSEDTFRVLAAADAAIMVLDAAKGIEPQTRKLFEVCRDREIPIVTFINKWDRPGLDALELLDEIEEVLVLEPAPVTWPVGYAGNFKGVIDRRSGDFVRYTRTDRGATVAPEEVVPSRIAASEEGEDWDAATDGIELLDAVGRSFDNERFVSGYQTPVYFGSALTNFGVRMMLEGLADVVPSPGPR 284
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A6N9ETV8_9ACTN (Peptide chain release factor 3 n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9ETV8_9ACTN) HSP 1 Score: 385 bits (988), Expect = 5.460e-128 Identity = 189/255 (74.12%), Postives = 213/255 (83.53%), Query Frame = 1 Query: 1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSP 765 DAGKTTLTEKFLLYGG LT GAGSV+AKGDRR+ SDWMELE++RGIS+TS V+QF YRD VLNLLDTPGH DFSEDTYRVL+A DAA+MVLDG+KGIEAQTRKLFEVCR+REIPIVTFINKWDRP+ DPLELLDEIEDQLVL+PVPV+WPVG+GERF G+IDR +VR++RTA GAT EEG W EA E VELLD G E D KRFEAGELSPVFFGSALTN+GVR++LDA+V++ P P Sbjct: 114 DAGKTTLTEKFLLYGGVLTAGAGSVRAKGDRRATASDWMELERRRGISVTSAVVQFRYRDRVLNLLDTPGHGDFSEDTYRVLSAVDAAVMVLDGAKGIEAQTRKLFEVCRNREIPIVTFINKWDRPARDPLELLDEIEDQLVLDPVPVTWPVGEGERFSGLIDRRAGHYVRFSRTAGGATAXXXXXXXXXXXXXEEGSAWHEAAEAVELLDGAGAELDVKRFEAGELSPVFFGSALTNYGVRMLLDAIVEMAPPP 368
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A7X7D7Z5_9ACTN (Peptide chain release factor 3 n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D7Z5_9ACTN) HSP 1 Score: 381 bits (979), Expect = 8.150e-128 Identity = 189/258 (73.26%), Postives = 216/258 (83.72%), Query Frame = 1 Query: 1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774 DAGKTTLTEKFLLYGGAL GAGSVKA+GDRRSATSDWME+EQQRGISITSTVLQFPYRD V+NLLDTPGHRDFSEDTYRVLAA DAA+MVLD +KGIE QT KLFEVC+ R++P++TFINKWDRP L+ LELLDEI+ ++ + PV+WPVG FRGVIDR FVR+TRTARGATEAPEEIV ++A EEG W A E ELL T+G +FD + F GELSP FFGSALTNFGVRL+LDA++DL P+PSP+ Sbjct: 21 DAGKTTLTEKFLLYGGALAGGAGSVKARGDRRSATSDWMEMEQQRGISITSTVLQFPYRDCVVNLLDTPGHRDFSEDTYRVLAAADAAVMVLDAAKGIEPQTLKLFEVCKARQMPLLTFINKWDRPGLEALELLDEIDAKIGVTAAPVTWPVGIAGDFRGVIDRTTGRFVRFTRTARGATEAPEEIVEPDRAEAEEGASWTTAAEEAELLGTMGLDFDMELFLGGELSPTFFGSALTNFGVRLLLDAIIDLAPAPSPR 278
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A5Q2RTS7_9ACTN (Peptide chain release factor 3 n=2 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RTS7_9ACTN) HSP 1 Score: 380 bits (975), Expect = 1.450e-126 Identity = 185/258 (71.71%), Postives = 219/258 (84.88%), Query Frame = 1 Query: 1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774 DAGKTTLTEKFLLYGGALT+ AGSVKAKG RRSATSDWMELEQ+RGISITSTVLQFPYRDHV+NLLDTPGHRDFSEDTYRVLAA DAA+MVLD +KGIE QT KLFEVCR+R++P++TFINKWDRP DPLELLDEIE Q+ + P PV+WPVG FRGVIDR +F+R+TRTA GATEA EE+++ ++AAE EG+ W A +ELL+ G + D++ F AG +PV+FGSALTNFGVRL+LD +VDL P+P+P+ Sbjct: 71 DAGKTTLTEKFLLYGGALTSEAGSVKAKGARRSATSDWMELEQKRGISITSTVLQFPYRDHVINLLDTPGHRDFSEDTYRVLAAADAAVMVLDAAKGIEPQTLKLFEVCRERDMPLLTFINKWDRPGRDPLELLDEIEAQIGVHPAPVTWPVGIAGDFRGVIDRRTGDFIRFTRTAGGATEAGEELLAPDEAAEREGEAWTAATGELELLEATGADVDEESFLAGISTPVYFGSALTNFGVRLMLDGVVDLAPAPAPR 328
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: UPI001C6324E4 (peptide chain release factor 3 n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C6324E4) HSP 1 Score: 378 bits (971), Expect = 1.740e-126 Identity = 181/258 (70.16%), Postives = 215/258 (83.33%), Query Frame = 1 Query: 1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPSPSPQ 774 DAGKTTLTEKFLLYGGALTTGAG+VKA+ R++ TSDWME+E+QRGISITSTVLQFPYRDHV+NLLDTPGHRDFSEDTYRVLAA DAA+MVLD +KGIE QT KLFEVCR+RE+P++TFINKWDRP D LEL+DE+E ++ + P PV+WPVG FRGV+DR +VR+TR ARGATEAPEEI+ A+ AA EGD W +A + + LL + + D + F AGE SP FFGSALTNFGVRL+LDA+VDL PSP+P+ Sbjct: 30 DAGKTTLTEKFLLYGGALTTGAGAVKAREGRKAVTSDWMEMERQRGISITSTVLQFPYRDHVINLLDTPGHRDFSEDTYRVLAAADAAVMVLDAAKGIEPQTLKLFEVCRERELPLLTFINKWDRPGRDALELIDEVEQRIGVMPTPVTWPVGIPGDFRGVVDRRTGRYVRFTRVARGATEAPEEILDADDAAAREGDAWTQASDELSLLSEIRADHDDELFRAGETSPTFFGSALTNFGVRLLLDAVVDLAPSPAPR 287
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Match: A0A7W0QW15_9ACTN (Peptide chain release factor 3 n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7W0QW15_9ACTN) HSP 1 Score: 374 bits (959), Expect = 1.100e-124 Identity = 184/254 (72.44%), Postives = 214/254 (84.25%), Query Frame = 1 Query: 1 DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITSTVLQFPYRDHVLNLLDTPGHRDFSEDTYRVLAATDAAIMVLDGSKGIEAQTRKLFEVCRDREIPIVTFINKWDRPSLDPLELLDEIEDQLVLEPVPVSWPVGDGERFRGVIDRNRNEFVRYTRTARGATEAPEEIVSAEQAAEEEGDLWIEAEEGVELLDTVGREFDQKRFEAGELSPVFFGSALTNFGVRLILDAMVDLVPS 762 DAGKTTLTEKFLLYGGAL+ GAG+VKA+GDRRSATSDWME+EQQRGISITSTVLQFPYRD V+NLLDTPGHRDFSEDTYRVLAA DAA+MVLD +KGIE QT KLFEV + R++P++TFINKWDRP L+ LELLDEIE ++ + PV+WPVG FRGVIDR +FVR+TRTARGATEAPEE+V ++AA EEGD W A + VELL T G + D + F GE+SP FFGSALTNFGVRL+LDA++DL P+ Sbjct: 29 DAGKTTLTEKFLLYGGALSGGAGAVKARGDRRSATSDWMEMEQQRGISITSTVLQFPYRDCVVNLLDTPGHRDFSEDTYRVLAAADAAVMVLDAAKGIEPQTLKLFEVVKARQMPLITFINKWDRPGLEALELLDEIEQKIGVVAAPVTWPVGIAGDFRGVIDRRSGDFVRFTRTARGATEAPEEVVEPDRAAVEEGDAWTVARDEVELLATSGLDHDDELFREGEMSPTFFGSALTNFGVRLLLDAVIDLAPA 282 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91373.21177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig91373.21177.1 >prot_M-pyrifera_M_contig91373.21177.1 ID=prot_M-pyrifera_M_contig91373.21177.1|Name=mRNA_M-pyrifera_M_contig91373.21177.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=258bp DAGKTTLTEKFLLYGGALTTGAGSVKAKGDRRSATSDWMELEQQRGISITback to top mRNA from alignment at M-pyrifera_M_contig91373:2..775+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig91373.21177.1 ID=mRNA_M-pyrifera_M_contig91373.21177.1|Name=mRNA_M-pyrifera_M_contig91373.21177.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig91373:2..775+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig91373:2..775+ >mRNA_M-pyrifera_M_contig91373.21177.1 ID=mRNA_M-pyrifera_M_contig91373.21177.1|Name=mRNA_M-pyrifera_M_contig91373.21177.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1548bp|location=Sequence derived from alignment at M-pyrifera_M_contig91373:2..775+ (Macrocystis pyrifera P11B4 male)back to top |