mRNA_M-pyrifera_M_contig91351.21170.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91351.21170.1
Unique NamemRNA_M-pyrifera_M_contig91351.21170.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91351.21170.1 vs. uniprot
Match: A0A2P6NXP7_9EUKA (Acyl-coenzyme A oxidase I n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NXP7_9EUKA)

HSP 1 Score: 187 bits (474), Expect = 7.110e-51
Identity = 99/228 (43.42%), Postives = 133/228 (58.33%), Query Frame = 1
Query:    1 FPSASNASVEEKILDYQTHQARLLPILAKTFAIIFAGQRLTDEHEQLMARLELKDTTGLKAIHATSSGLKAFCTWWCLESIETCRQCCGGLGYSSYSGLPSMLQDYAVHCTWEGDNTVMALQNARVLIHAFKHP---EEATGFMAYLTELDGAPP---PVSNMTDVRSRGVQLFLHRLAAVIGVRKVSYRLDELVMGGMAPDQAWQHCTEELVEVARRHIDFYLWTCF 666
            FPSA N +VE KILDY THQ RLLPILA  +A  F   +L   +E L+  LE  D + L  +HATS+GLKAF TWWC ES+E  RQC GG GYSSY+G+  +L D+AV+C+WEGDNTV+A Q A+ LI + +     ++  GF +Y+ E         PV  + DV    +QL   +   +    K+S  ++E    G    Q W     E V +AR H ++Y+  CF
Sbjct:  373 FPSAENPNVESKILDYPTHQIRLLPILAAAYAYHFTSDQLNKHYESLLLDLERGDISALAGVHATSAGLKAFGTWWCNESLEVTRQCLGGHGYSSYAGISPLLADFAVNCSWEGDNTVLAQQTAKFLIKSLRKVASGKKMNGFESYMNEARSVGSQKWPVQTIEDVLDADLQLRAFQNLVIFIATKISRIMEEEAGKGKNKQQVWSSVMAEQVLLARVHCEYYVLHCF 600          
BLAST of mRNA_M-pyrifera_M_contig91351.21170.1 vs. uniprot
Match: A0A8H7SJX8_9FUNG (Acyl-CoA oxidase n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SJX8_9FUNG)

HSP 1 Score: 179 bits (453), Expect = 4.860e-48
Identity = 95/237 (40.08%), Postives = 138/237 (58.23%), Query Frame = 1
Query:    1 FPSASNASVEEKILDYQTHQARLLPILAKTFAIIFAGQRLTDEHEQLMARLE-LKDTTG--------LKAIHATSSGLKAFCTWWCLESIETCRQCCGGLGYSSYSGLPSMLQDYAVHCTWEGDNTVMALQNARVLIHAFKHP------EEATGFMAYLTELDGAPPPVSNMTDVRSRGVQLFLHRLAAVIGVRKVSYRLDELVMGGMAPDQAWQHCTEELVEVARRHIDFYLWTCF 666
            F S+++  +E K+LDY  HQ RL+P+L++TFA++F G  +T+ +  +M RLE  K+           LK  H+TS+GLKAFCTW CL +IE CRQ CGG GYSSY+GL +M QD+AV CTWEGDNT++ LQ  R LI  ++            G++  L +L G    V+N+ D+ S  V     ++     VR  S   +  +  GM PD A++ C++  +  A+ H   YL+  F
Sbjct:  329 FSSSNSNGIETKLLDYPIHQRRLMPLLSQTFAMLFTGTEMTEMYNAMMTRLEGAKEGDADLDEVIEILKETHSTSAGLKAFCTWNCLSTIEACRQACGGHGYSSYTGLAAMYQDFAVQCTWEGDNTILTLQLGRYLISCYREAVSGKKLSPGVGYLNNLDQLIGKRCSVNNLEDILSPQVITEGWQVVCANVVRNASLEFEACLKKGMQPDDAYEECSQSRLYAAKLHSFGYLFNRF 565          
BLAST of mRNA_M-pyrifera_M_contig91351.21170.1 vs. uniprot
Match: A0A367JPJ3_RHIST (Acyl-coenzyme A oxidase n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367JPJ3_RHIST)

HSP 1 Score: 174 bits (440), Expect = 3.990e-47
Identity = 95/237 (40.08%), Postives = 136/237 (57.38%), Query Frame = 1
Query:    1 FPSASNASVEEKILDYQTHQARLLPILAKTFAIIFAGQRLTDEHEQLMARLEL-----KDTTG----LKAIHATSSGLKAFCTWWCLESIETCRQCCGGLGYSSYSGLPSMLQDYAVHCTWEGDNTVMALQNARVLIHAF------KHPEEATGFMAYLTELDGAPPPVSNMTDVRSRGVQLFLHRLAAVIGVRKVSYRLDELVMGGMAPDQAWQHCTEELVEVARRHIDFYLWTCF 666
            F S+    +E K+LDY  HQ RL+P+LA+TFA++F G  +TD +  +M+ L+      +D  G    LK  HATS+GLKAFCTW CL  IE CRQ CGG GYS+Y+GL  M QD+AV CTWEGDNT++ LQ  R LI+++      K      G++  L EL      V+ + D+ S  + +   ++     VRK     +  +  GM  D A++HC++  +  A+ H   YL+  F
Sbjct:  276 FASSHANGIETKLLDYPIHQRRLMPLLAQTFAMLFTGTEMTDMYNIMMSHLDGAKEGDEDLEGVIEMLKETHATSAGLKAFCTWHCLSIIEQCRQSCGGHGYSAYTGLAQMYQDFAVQCTWEGDNTILTLQLGRYLINSYREALRGKQLSPGVGYLNRLDELLHTQCQVNQLEDILSPEIIIEGWQVVCAHSVRKAGIEFEACLEQGMDIDDAYEHCSQSRLYAAKLHSFGYLFHRF 512          
BLAST of mRNA_M-pyrifera_M_contig91351.21170.1 vs. uniprot
Match: A0A367KEV6_RHIAZ (Acyl-coenzyme A oxidase n=4 Tax=Rhizopus TaxID=4842 RepID=A0A367KEV6_RHIAZ)

HSP 1 Score: 174 bits (440), Expect = 7.340e-47
Identity = 94/235 (40.00%), Postives = 135/235 (57.45%), Query Frame = 1
Query:    7 SASNASVEEKILDYQTHQARLLPILAKTFAIIFAGQRLTDEHEQLMARLEL---------KDTTGLKAIHATSSGLKAFCTWWCLESIETCRQCCGGLGYSSYSGLPSMLQDYAVHCTWEGDNTVMALQNARVLIHAFKHP------EEATGFMAYLTELDGAPPPVSNMTDVRSRGVQLFLHRLAAVIGVRKVSYRLDELVMGGMAPDQAWQHCTEELVEVARRHIDFYLWTCF 666
            S S++ +E K+LDY  HQ RL+P+LA+TFA++F G  +TD + ++M RLE          K    LK  HATS+GLKAFCTW CL +IE CRQ CGG GYS+Y+GL  M QD+AV CTWEGDNT++ LQ  R LI +F+            G++  L  L G     +N+  +    V L   ++     VR  +   +E +  G++ D A++ C++  +  A+ H   YL+  F
Sbjct:  338 SNSDSKIETKLLDYPIHQRRLMPLLAQTFAMLFTGSEMTDMYNKMMNRLENAKPGDTDLEKVLEMLKETHATSAGLKAFCTWNCLSTIEACRQACGGHGYSAYTGLAGMYQDFAVQCTWEGDNTILTLQLGRYLIASFREAIKGKKLSPGVGYLNNLDALVGKRCSAANVDALLDPKVILEGWQVVCANVVRNAALEFEECIKQGLSVDDAYEQCSQSRLYAAKLHSYGYLFNRF 572          
BLAST of mRNA_M-pyrifera_M_contig91351.21170.1 vs. uniprot
Match: I1C384_RHIO9 (Acyl-coenzyme A oxidase n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1C384_RHIO9)

HSP 1 Score: 172 bits (436), Expect = 1.020e-46
Identity = 95/237 (40.08%), Postives = 136/237 (57.38%), Query Frame = 1
Query:    1 FPSASNASVEEKILDYQTHQARLLPILAKTFAIIFAGQRLTDEHEQLMARLEL-----KDTTG----LKAIHATSSGLKAFCTWWCLESIETCRQCCGGLGYSSYSGLPSMLQDYAVHCTWEGDNTVMALQNARVLIHAFKHP------EEATGFMAYLTELDGAPPPVSNMTDVRSRGVQLFLHRLAAVIGVRKVSYRLDELVMGGMAPDQAWQHCTEELVEVARRHIDFYLWTCF 666
            F S++   VE K+LDY  HQ RL+P+LA+TFA++F G  +T  +  +M+RL+      KD       LK  H+TS+GLKAFCTW CL +IE CRQ CGG GYS+Y+GL SM QD+AV CTWEGDNT++ LQ  R LI +++            G++  L  L G    VSN+ D+ S  V     ++     V+      +E +  G+  D A++ C++  +  A+ H   YL+  F
Sbjct:  243 FASSNANGVETKLLDYPIHQRRLMPLLAQTFAMLFTGTEMTAMYNYMMSRLDSAKEGDKDLDEVIEMLKETHSTSAGLKAFCTWNCLSTIEACRQACGGHGYSAYTGLASMYQDFAVQCTWEGDNTILTLQLGRYLISSYREALKGKKLSPGVGYLNNLHSLIGRRCKVSNLDDILSFDVIAEGWQVVCAHVVKNAGSEFEECLKRGLNVDDAYEQCSQSRLYAAKLHSFNYLFNRF 479          
BLAST of mRNA_M-pyrifera_M_contig91351.21170.1 vs. uniprot
Match: A0A367J592_RHIST (Acyl-CoA oxidase (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367J592_RHIST)

HSP 1 Score: 171 bits (434), Expect = 1.200e-46
Identity = 94/237 (39.66%), Postives = 133/237 (56.12%), Query Frame = 1
Query:    1 FPSASNASVEEKILDYQTHQARLLPILAKTFAIIFAGQRLTDEHEQLMARLE--------LKDTTG-LKAIHATSSGLKAFCTWWCLESIETCRQCCGGLGYSSYSGLPSMLQDYAVHCTWEGDNTVMALQNARVLIHAFKHP------EEATGFMAYLTELDGAPPPVSNMTDVRSRGVQLFLHRLAAVIGVRKVSYRLDELVMGGMAPDQAWQHCTEELVEVARRHIDFYLWTCF 666
            F S+    +E K+LDY  HQ RL+P+LA+TFA++F G  +T+ +  +M RL+        L+     LK  H+TS+GLKAFCTW CL +IETCRQ CGG GYSSY+GL SM QD+AV CTWEGDNT++ LQ  R LI +++            G++  L  L G    V+N   +    V      +     VR  S   +E +  G+  D A++ C++  +  A+ H   YL+  F
Sbjct:  203 FASSGANGIETKLLDYPIHQRRLMPLLAQTFAMLFTGTEMTEMYNSMMTRLDSTREGDSDLEQVMEMLKETHSTSAGLKAFCTWNCLSTIETCRQACGGHGYSSYTGLASMYQDFAVQCTWEGDNTILTLQLGRYLISSYREALKGKKLSPGVGYLNNLQNLIGKRCGVTNFESLLDFNVIAEGWSVVCAHVVRNASIEFEECLKKGLNVDDAYEQCSQSRLYAAKLHSFSYLFNRF 439          
BLAST of mRNA_M-pyrifera_M_contig91351.21170.1 vs. uniprot
Match: A0A8H7PXU9_MORIS (Acyl-coenzyme A oxidase n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PXU9_MORIS)

HSP 1 Score: 173 bits (438), Expect = 1.540e-46
Identity = 94/237 (39.66%), Postives = 131/237 (55.27%), Query Frame = 1
Query:    1 FPSASNASVEEKILDYQTHQARLLPILAKTFAIIFAGQRLTDEHEQLMARLELKDTT---------GLKAIHATSSGLKAFCTWWCLESIETCRQCCGGLGYSSYSGLPSMLQDYAVHCTWEGDNTVMALQNARVLIHAFKHPEEA------TGFMAYLTELDGAPPPVSNMTDVRSRGVQLFLHRLAAVIGVRKVSYRLDELVMGGMAPDQAWQHCTEELVEVARRHIDFYLWTCF 666
            F + +N  +E K+LDY  HQ RL+P+LA+ FA+ F G  +   + QLM RLE               LK  HATS+GLKAFCTW CL +IE CRQ CGG GYS+Y+GL  M QD+AV CTWEGDNT++ LQ  R LI +++  +E         ++  L EL G    VS + DV +  V      +     V+      +E +  GM  D+A++ C++  +  A+ H   YL+  F
Sbjct:  345 FATKANEGIETKLLDYPIHQRRLMPLLAQAFAMHFTGTEMNTMYLQLMDRLESAGPDDDDLPEVLENLKETHATSAGLKAFCTWNCLNTIEQCRQACGGHGYSAYTGLAGMYQDFAVQCTWEGDNTILTLQAGRYLISSYREAQEGKKLAAGVSYLNRLNELIGKKCSVSKVEDVATLDVIAEAWDVVCANVVQHAGKEFEECIKSGMEIDEAYEQCSQSRLYAAKLHSYGYLFKRF 581          
BLAST of mRNA_M-pyrifera_M_contig91351.21170.1 vs. uniprot
Match: A0A8H7V8M9_9FUNG (Acyl-coenzyme A oxidase n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7V8M9_9FUNG)

HSP 1 Score: 171 bits (434), Expect = 5.260e-46
Identity = 95/235 (40.43%), Postives = 135/235 (57.45%), Query Frame = 1
Query:    7 SASNASVEEKILDYQTHQARLLPILAKTFAIIFAGQRLTDEHEQLMARLE-LKDTTG--------LKAIHATSSGLKAFCTWWCLESIETCRQCCGGLGYSSYSGLPSMLQDYAVHCTWEGDNTVMALQNARVLIHAFKHP---EEATGFMAYLTELD---GAPPPVSNMTDVRSRGVQLFLHRLAAVIGVRKVSYRLDELVMGGMAPDQAWQHCTEELVEVARRHIDFYLWTCF 666
            S+S   +E K+LDY  HQ RL+P+LA+TFA+ F    +TD +  +M RLE  K+           LK  H+TS+GLKAFCTW CL +IE CRQ CGG GYS+Y+GL SM  D+AV CTWEGDNT++ LQ  R LI +++     ++ +  + YL +LD   G    V  M D+ S  + +   ++     VR      D  +  GM  D A++HC++  +  A+ H   YL+  F
Sbjct:  339 SSSKTDIETKLLDYPIHQRRLMPLLAQTFAMSFTATEMTDMYNLMMTRLEGAKEGDADIDEVMEILKETHSTSAGLKAFCTWNCLSTIEACRQACGGHGYSAYTGLSSMYADFAVQCTWEGDNTILTLQLGRYLISSYRDALGGKKLSPGVGYLNKLDVLIGKKCQVKRMEDILSPELIIEGWQVVCANVVRNAGIEFDACLKQGMDVDDAYEHCSQSRLYAAKLHSFSYLFNRF 573          
BLAST of mRNA_M-pyrifera_M_contig91351.21170.1 vs. uniprot
Match: A0A163DLT3_PHYB8 (Acyl-coenzyme A oxidase n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A163DLT3_PHYB8)

HSP 1 Score: 171 bits (433), Expect = 5.790e-46
Identity = 90/237 (37.97%), Postives = 139/237 (58.65%), Query Frame = 1
Query:    7 SASNASVEEKILDYQTHQARLLPILAKTFAIIFAGQRLTDEHEQLMARLE-----------LKDTTGLKAIHATSSGLKAFCTWWCLESIETCRQCCGGLGYSSYSGLPSMLQDYAVHCTWEGDNTVMALQNARVLIHAFKHPEEA------TGFMAYLTELDGAPPPVSNMTDVRSRGVQLFLHRLAAVIGVRKVSYRLDELVMGGMAPDQAWQHCTEELVEVARRHIDFYLWTCF 666
            S+S++++E K+LDY  HQ RL+P+LA+TFA++F G  +T  + ++M RLE           + +T  LK  H+TS+GLKAFCTW CLE+IE CRQ CGG GYS+Y+GL  M QD+AV CTWEGDNT++ LQ  R LI +++   +        G++  L +L G    V  + D+    + +   ++     V+  +   +  +  G  PD A++ C++  +  A+ H   YL+  F
Sbjct:  309 SSSDSTIETKLLDYPIHQRRLMPLLAQTFAMLFTGSEMTTMYNEMMQRLENAKPGDSDLDEVMET--LKETHSTSAGLKAFCTWNCLETIEQCRQACGGHGYSAYTGLAGMYQDFAVQCTWEGDNTILTLQAGRYLISSYREAMKGKKLSPGVGYLNRLDQLIGKKCQVKELEDLLRPEIIIEGWQVVCANVVKNAAKEFEAHLARGKKPDDAYEECSQSRLYAAKLHTFGYLYHRF 543          
BLAST of mRNA_M-pyrifera_M_contig91351.21170.1 vs. uniprot
Match: A0A1X2GVY0_9FUNG (Acyl-coenzyme A oxidase n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GVY0_9FUNG)

HSP 1 Score: 171 bits (433), Expect = 6.850e-46
Identity = 90/237 (37.97%), Postives = 137/237 (57.81%), Query Frame = 1
Query:    1 FPSASNASVEEKILDYQTHQARLLPILAKTFAIIFAGQRLTDEHEQLMARLEL-----KDTT----GLKAIHATSSGLKAFCTWWCLESIETCRQCCGGLGYSSYSGLPSMLQDYAVHCTWEGDNTVMALQNARVLIHAFKHPEEA------TGFMAYLTELDGAPPPVSNMTDVRSRGVQLFLHRLAAVIGVRKVSYRLDELVMGGMAPDQAWQHCTEELVEVARRHIDFYLWTCF 666
            F ++ +  VE K+LDY  HQ RL+P+LA+++A++F G  ++D +  +M+RLE      KD       LK  H+TS+GLKAFCTW CL +IE CRQ CGG GYS+Y+GL  M QD+AV CTWEGDNT++ LQ  R LI +++   +        G++  L+EL G    VS++  +    V +   ++     V+      +  +  G+  D A++ C++  +  AR H   YL+  F
Sbjct:  330 FANSKSGGVETKLLDYPIHQRRLMPLLAQSYAMLFTGIEMSDMYNSMMSRLESASEGDKDLNEVIEALKETHSTSAGLKAFCTWNCLNTIEQCRQSCGGHGYSAYTGLAGMYQDFAVQCTWEGDNTILTLQAGRYLISSYREAAKGKKLAPGVGYLNNLSELIGKKCAVSSLEQILDPAVIIEGWQVVCANVVKNAGVEFEACLASGLDIDDAYEQCSQSRLYAARLHSYGYLFNRF 566          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91351.21170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6NXP7_9EUKA7.110e-5143.42Acyl-coenzyme A oxidase I n=1 Tax=Planoprotosteliu... [more]
A0A8H7SJX8_9FUNG4.860e-4840.08Acyl-CoA oxidase n=1 Tax=Thamnidium elegans TaxID=... [more]
A0A367JPJ3_RHIST3.990e-4740.08Acyl-coenzyme A oxidase n=1 Tax=Rhizopus stolonife... [more]
A0A367KEV6_RHIAZ7.340e-4740.00Acyl-coenzyme A oxidase n=4 Tax=Rhizopus TaxID=484... [more]
I1C384_RHIO91.020e-4640.08Acyl-coenzyme A oxidase n=1 Tax=Rhizopus delemar (... [more]
A0A367J592_RHIST1.200e-4639.66Acyl-CoA oxidase (Fragment) n=1 Tax=Rhizopus stolo... [more]
A0A8H7PXU9_MORIS1.540e-4639.66Acyl-coenzyme A oxidase n=1 Tax=Mortierella isabel... [more]
A0A8H7V8M9_9FUNG5.260e-4640.43Acyl-coenzyme A oxidase n=1 Tax=Mucor saturninus T... [more]
A0A163DLT3_PHYB85.790e-4637.97Acyl-coenzyme A oxidase n=1 Tax=Phycomyces blakesl... [more]
A0A1X2GVY0_9FUNG6.850e-4637.97Acyl-coenzyme A oxidase n=1 Tax=Hesseltinella vesi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91351contigM-pyrifera_M_contig91351:2..774 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score172.6
Seed ortholog evalue2.1e-40
Seed eggNOG ortholog936053.I1C384
Preferred namePOX1
KEGG rclassRC00052,RC00076
KEGG koko:K00232
KEGG ReactionR01175,R01279,R03777,R03857,R03990,R04751,R04754,R07888,R07892,R07896,R07934,R07950
KEGG Pathwayko00071,ko00592,ko01040,ko01100,ko01110,ko01212,ko03320,ko04024,ko04146,map00071,map00592,map01040,map01100,map01110,map01212,map03320,map04024,map04146
KEGG ModuleM00087,M00113
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0003995,GO:0003997,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016627,GO:0016634,GO:0019395,GO:0019752,GO:0030258,GO:0031907,GO:0031974,GO:0032787,GO:0033539,GO:0033540,GO:0034440,GO:0036094,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070013,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575
EggNOG free text desc.Acyl-CoA oxidase
EggNOG OGs1GSRH@112252,38BTU@33154,3NUCQ@4751,COG1960@1,KOG0136@2759
EC1.3.3.6
COG Functional cat.I
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons3
Model size666
Cds size666
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91351.21170.1prot_M-pyrifera_M_contig91351.21170.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91351 2..774 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816826.16682-CDS-M-pyrifera_M_contig91351:1..371622816826.16682-CDS-M-pyrifera_M_contig91351:1..37Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91351 2..37 +
1692278201.0868583-CDS-M-pyrifera_M_contig91351:1..371692278201.0868583-CDS-M-pyrifera_M_contig91351:1..37Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91351 2..37 +
1622816826.1800458-CDS-M-pyrifera_M_contig91351:89..5571622816826.1800458-CDS-M-pyrifera_M_contig91351:89..557Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91351 90..557 +
1692278201.109514-CDS-M-pyrifera_M_contig91351:89..5571692278201.109514-CDS-M-pyrifera_M_contig91351:89..557Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91351 90..557 +
1622816826.1905267-CDS-M-pyrifera_M_contig91351:612..7741622816826.1905267-CDS-M-pyrifera_M_contig91351:612..774Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91351 613..774 +
1692278201.1236122-CDS-M-pyrifera_M_contig91351:612..7741692278201.1236122-CDS-M-pyrifera_M_contig91351:612..774Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91351 613..774 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91351.21170.1

>prot_M-pyrifera_M_contig91351.21170.1 ID=prot_M-pyrifera_M_contig91351.21170.1|Name=mRNA_M-pyrifera_M_contig91351.21170.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=222bp
FPSASNASVEEKILDYQTHQARLLPILAKTFAIIFAGQRLTDEHEQLMAR
LELKDTTGLKAIHATSSGLKAFCTWWCLESIETCRQCCGGLGYSSYSGLP
SMLQDYAVHCTWEGDNTVMALQNARVLIHAFKHPEEATGFMAYLTELDGA
PPPVSNMTDVRSRGVQLFLHRLAAVIGVRKVSYRLDELVMGGMAPDQAWQ
HCTEELVEVARRHIDFYLWTCF
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mRNA from alignment at M-pyrifera_M_contig91351:2..774+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91351.21170.1 ID=mRNA_M-pyrifera_M_contig91351.21170.1|Name=mRNA_M-pyrifera_M_contig91351.21170.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=773bp|location=Sequence derived from alignment at M-pyrifera_M_contig91351:2..774+ (Macrocystis pyrifera P11B4 male)
TTTCCATCCGCGTCTAACGCTAGCGTCGAAGAGAAGGTACTTGTTGGCTT GAAGAATGCATCCTCACATAGGCTGACGAAATGACAAGATTTTGGACTAT CAGACTCACCAGGCGCGCTTGCTGCCGATCCTGGCAAAGACATTCGCAAT AATCTTTGCAGGACAGCGCCTCACCGATGAACACGAGCAGTTGATGGCCA GGCTGGAGCTCAAGGACACCACTGGCCTCAAGGCCATTCATGCTACCTCC TCTGGCCTGAAAGCCTTCTGTACGTGGTGGTGCCTTGAGTCCATCGAGAC TTGCCGTCAGTGCTGTGGAGGGCTGGGGTACAGCTCCTACAGCGGCCTGC CTTCCATGTTGCAAGACTACGCAGTTCACTGTACGTGGGAAGGTGACAAC ACTGTCATGGCTTTGCAGAATGCACGAGTCCTCATCCATGCGTTCAAGCA CCCCGAAGAAGCCACTGGCTTCATGGCTTACCTCACCGAACTCGACGGTG CCCCGCCTCCGGTGTCGAACATGACCGATGTCCGATCGCGAGGGGTGCAG CTCTTCGTACGCTCTACGTCTCGTTCTCTGCCTCGCTCGTTTGCATGCTA ACGGGTGGTAGCTGCATCGACTCGCTGCAGTGATTGGTGTCAGAAAGGTC AGCTATCGTCTGGACGAGCTCGTAATGGGTGGTATGGCTCCGGACCAAGC CTGGCAGCACTGCACCGAGGAACTCGTGGAAGTTGCAAGGCGACACATCG ACTTCTACTTGTGGACGTGCTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91351:2..774+

>mRNA_M-pyrifera_M_contig91351.21170.1 ID=mRNA_M-pyrifera_M_contig91351.21170.1|Name=mRNA_M-pyrifera_M_contig91351.21170.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1332bp|location=Sequence derived from alignment at M-pyrifera_M_contig91351:2..774+ (Macrocystis pyrifera P11B4 male)
TTTCCATCCGCGTCTAACGCTAGCGTCGAAGAGAAGTTTCCATCCGCGTC
TAACGCTAGCGTCGAAGAGAAGATTTTGGACTATCAGACTCACCAGGCGC
GCTTGCTGCCGATCCTGGCAAAGACATTCGCAATAATCTTTGCAGGACAG
CGCCTCACCGATGAACACGAGCAGTTGATGGCCAGGCTGGAGCTCAAGGA
CACCACTGGCCTCAAGGCCATTCATGCTACCTCCTCTGGCCTGAAAGCCT
TCTGTACGTGGTGGTGCCTTGAGTCCATCGAGACTTGCCGTCAGTGCTGT
GGAGGGCTGGGGTACAGCTCCTACAGCGGCCTGCCTTCCATGTTGCAAGA
CTACGCAGTTCACTGTACGTGGGAAGGTGACAACACTGTCATGGCTTTGC
AGAATGCACGAGTCCTCATCCATGCGTTCAAGCACCCCGAAGAAGCCACT
GGCTTCATGGCTTACCTCACCGAACTCGACGGTGCCCCGCCTCCGGTGTC
GAACATGACCGATGTCCGATCGCGAGGGGTGCAGCTCTTCATTTTGGACT
ATCAGACTCACCAGGCGCGCTTGCTGCCGATCCTGGCAAAGACATTCGCA
ATAATCTTTGCAGGACAGCGCCTCACCGATGAACACGAGCAGTTGATGGC
CAGGCTGGAGCTCAAGGACACCACTGGCCTCAAGGCCATTCATGCTACCT
CCTCTGGCCTGAAAGCCTTCTGTACGTGGTGGTGCCTTGAGTCCATCGAG
ACTTGCCGTCAGTGCTGTGGAGGGCTGGGGTACAGCTCCTACAGCGGCCT
GCCTTCCATGTTGCAAGACTACGCAGTTCACTGTACGTGGGAAGGTGACA
ACACTGTCATGGCTTTGCAGAATGCACGAGTCCTCATCCATGCGTTCAAG
CACCCCGAAGAAGCCACTGGCTTCATGGCTTACCTCACCGAACTCGACGG
TGCCCCGCCTCCGGTGTCGAACATGACCGATGTCCGATCGCGAGGGGTGC
AGCTCTTCCTGCATCGACTCGCTGCAGTGATTGGTGTCAGAAAGGTCAGC
TATCGTCTGGACGAGCTCGTAATGGGTGGTATGGCTCCGGACCAAGCCTG
GCAGCACTGCACCGAGGAACTCGTGGAAGTTGCAAGGCGACACATCGACT
TCTACTTGTGGACGTGCTTCCTGCATCGACTCGCTGCAGTGATTGGTGTC
AGAAAGGTCAGCTATCGTCTGGACGAGCTCGTAATGGGTGGTATGGCTCC
GGACCAAGCCTGGCAGCACTGCACCGAGGAACTCGTGGAAGTTGCAAGGC
GACACATCGACTTCTACTTGTGGACGTGCTTC
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