mRNA_M-pyrifera_M_contig91340.21167.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91340.21167.1
Unique NamemRNA_M-pyrifera_M_contig91340.21167.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91340.21167.1 vs. uniprot
Match: A4RTU5_OSTLU (DMT family transporter: phosphate/phosphoenolpyruvate (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RTU5_OSTLU)

HSP 1 Score: 122 bits (306), Expect = 5.550e-30
Identity = 88/217 (40.55%), Postives = 124/217 (57.14%), Query Frame = 1
Query:    1 TNGSMAAVAVSFAHTVKAAEPLFSVALAAALLGQALSRPLLAALLLITAGTALASATELSYSHAGMAAAMASNVLFSSRNAVAKLLQRPSGPSACAWAEDSVALFLLLSGAXXXXXXXXXXXXXXXXXXXXXPTA----------PLLLAAGCHCAYNLTSFLLLARVSPVTHAVANAMRRLFIIAVALLWFANPVTAANVAGTALACAGVLLYAQA 621
            TN S+  VAVSF HT+KA EP FSV L+A  LG   S  ++ AL+ +  G ALAS TE+S+  AG  AAM SN+ F SRN ++K +    G S+   A D++ LF +++                        +A           L++A  C   Y   S+++L+RVSPVTH+V N M+R+ +I V LL+F NPV+  N+AGTALA +GV LY++A
Sbjct:   85 TNVSLGKVAVSFTHTIKAMEPFFSVLLSALFLGDIPSLAVVGALVPVVGGVALASMTEVSFCWAGFLAAMGSNITFQSRNVLSKKMM---GLSSIKGAIDNINLFSVITMLSCVVCLPIAIGLEGVHFTPSTISAVGVSVQELAKSLMIAGFCFQMYQQISYMILSRVSPVTHSVGNCMKRVTVIVVTLLYFKNPVSPLNMAGTALALSGVFLYSRA 298          
BLAST of mRNA_M-pyrifera_M_contig91340.21167.1 vs. uniprot
Match: Q01D95_OSTTA (Triose phosphate/phosphoenolpyruvate translocator n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q01D95_OSTTA)

HSP 1 Score: 123 bits (309), Expect = 1.940e-29
Identity = 88/217 (40.55%), Postives = 123/217 (56.68%), Query Frame = 1
Query:    1 TNGSMAAVAVSFAHTVKAAEPLFSVALAAALLGQALSRPLLAALLLITAGTALASATELSYSHAGMAAAMASNVLFSSRNAVAKLLQRPSGPSACAWAEDSVALFLLLSGAXXXXXXXXXXXXXXXXXXXXXPTAP----------LLLAAGCHCAYNLTSFLLLARVSPVTHAVANAMRRLFIIAVALLWFANPVTAANVAGTALACAGVLLYAQA 621
            TN S+  VAVSF HT+KA+EP FSV L+A  LG   S  ++AALL +  G ALAS TE+S+  AG  AA+ SN+ F SRN ++K +    G S    A D++ LF +++                         A           LL+A  C   Y   S+++L+RVSPVTH+V N M+R+ +I V L++F NPV+  N+AGTA+A  GV LY++A
Sbjct:  194 TNVSLGKVAVSFTHTIKASEPFFSVLLSALFLGDVPSLAVMAALLPVVGGVALASMTEVSFCWAGFLAALGSNITFQSRNVLSKKMM---GMSVIKGAIDNINLFSVITMLSCLVALPVAIGVEGVRFTPAAIAATGANVAELSKSLLVAGFCFQMYQQISYMILSRVSPVTHSVGNCMKRVTVIVVTLIYFKNPVSPLNMAGTAMALTGVFLYSRA 407          
BLAST of mRNA_M-pyrifera_M_contig91340.21167.1 vs. uniprot
Match: A0A7S1SP31_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SP31_9CHLO)

HSP 1 Score: 122 bits (305), Expect = 5.550e-29
Identity = 87/218 (39.91%), Postives = 122/218 (55.96%), Query Frame = 1
Query:    1 TNGSMAAVAVSFAHTVKAAEPLFSVALAAALLGQALSRPLLAALLLITAGTALASATELSYSHAGMAAAMASNVLFSSRNAVAKLLQRPSGPSACAWAEDSVALF--------LLLSGAXXXXXXXXXXXXXXXXXXXXXPTAPL---LLAAGCHCAYNLTSFLLLARVSPVTHAVANAMRRLFIIAVALLWFANPVTAANVAGTALACAGVLLYAQA 621
            TN S+  VAVSF HT+KA EP FSVAL+AA LG   + P+L +L+ +  G ALAS +E +++  G  AAM SN+ F SRN ++K L      +A     D++ LF         LL+                       P+A +   + AA C  AY   S+++L RVSPVTH++ N ++R+ +I  +++ FANPVT  N AGTALA  GV  Y+QA
Sbjct:  195 TNVSLGKVAVSFTHTIKAMEPFFSVALSAAFLGDIPTLPILLSLIPVVGGVALASLSEPTFNWPGFLAAMGSNITFQSRNVLSKKLMGGKPKTAGGGKMDNINLFSIITIMSFFLLTPVTLMAEGVQFTTANMAAMGVADPSALMVRAMQAAVCFHAYQQVSYMILQRVSPVTHSIGNCVKRVVVIVASVIVFANPVTPVNAAGTALALLGVFAYSQA 412          
BLAST of mRNA_M-pyrifera_M_contig91340.21167.1 vs. uniprot
Match: A0A250X7Z0_9CHLO (TPT domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X7Z0_9CHLO)

HSP 1 Score: 120 bits (300), Expect = 1.750e-28
Identity = 83/221 (37.56%), Postives = 124/221 (56.11%), Query Frame = 1
Query:    1 TNGSMAAVAVSFAHTVKAAEPLFSVALAAALLGQALSRPLLAALLLITAGTALASATELSYSHAGMAAAMASNVLFSSRNAVAK--LLQRPSGPSACAWAEDSVALFLLLSGAXXXXXXXXXXXXXXXXXXXXXPTAPL---LLAAGCHCAYNLTSFLLLARVSPVTHAVANAMRRLFIIAVALLWFANPVTAANVAGTALACAGVLLYAQATHWLRQRQQ 648
            TN S+ AV+VSF HT+KA EP FSV L+A  LG   S P+L  L  I  G ALAS +E S++  G A AM SN+ F SRN ++K  +L++    +   ++  +VA F LL                        P   +    LA  C   Y   S+++L RV+PVTH++ N+++R+ +IA A+++F+ P++  N AGTALA  GV  Y+Q   W R++++
Sbjct:  142 TNISLGAVSVSFTHTIKAMEPFFSVLLSAIFLGDIPSLPVLLTLFPIVGGVALASMSEASFNWLGFATAMGSNLTFQSRNVLSKKMMLKKEGMDNITMFSIMTVASFFLLLPFSLLMDGWKFTPAYLASAGLLEPNTIIQQACLAGLCFHTYQQVSYMILQRVTPVTHSIGNSVKRVIVIAAAVVFFSTPMSTQNAAGTALALGGVFAYSQVKRWQRKKKE 362          
BLAST of mRNA_M-pyrifera_M_contig91340.21167.1 vs. uniprot
Match: A0A7S0PPV3_9CHLO (Hypothetical protein n=5 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PPV3_9CHLO)

HSP 1 Score: 120 bits (300), Expect = 3.650e-28
Identity = 89/229 (38.86%), Postives = 128/229 (55.90%), Query Frame = 1
Query:    1 TNGSMAAVAVSFAHTVKAAEPLFSVALAAALLGQALSRPLLAALLLITAGTALASATELSYSHAGMAAAMASNVLFSSRNAVAKLLQRPSGPSACAWAEDSVALFLLLSGAXXXXXXXXXXXXXXXXXXXXXPTAP----------LLLAAGCHCAYNLTSFLLLARVSPVTHAVANAMRRLFIIAVALLWFANPVTAANVAGTALACAGVLLYAQATHWLRQRQQHAK 657
            TN S+  VAVSF HT+KA EP FSV L+A  LG   S  ++ AL+ +  G ALAS TE+S++ AG  AAM SN+ F SRN ++K +    G S+   A D++ LF +++                         A           L +A  C   Y   S+++L+RV+PVTH+V N M+R+ +I V L++F NPV+  N+AGTALA  GV LY++A    +Q ++ AK
Sbjct:  191 TNVSLGKVAVSFTHTIKAMEPFFSVLLSALFLGDIPSLAVVGALVPVVGGVALASITEVSFNWAGFFAAMGSNITFQSRNVLSKKMM---GLSSIKGAIDNINLFSVITMLSCLVCLPIAMGLEGVRFTPQAMAAAGLNVGELIQRLAIAGFCFQMYQQISYMILSRVTPVTHSVGNCMKRVTVIVVTLIYFKNPVSPLNIAGTALALFGVFLYSRA----KQNEKGAK 412          
BLAST of mRNA_M-pyrifera_M_contig91340.21167.1 vs. uniprot
Match: A0A090M166_OSTTA (Triose-phosphate transporter domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M166_OSTTA)

HSP 1 Score: 117 bits (293), Expect = 1.120e-27
Identity = 89/216 (41.20%), Postives = 121/216 (56.02%), Query Frame = 1
Query:    1 TNGSMAAVAVSFAHTVKAAEPLFSVALAAALLGQALSRPLLAALLLITAGTALASATELSYSHAGMAAAMASNVLFSSRNAVAKLLQRPSGPSACAWAEDSVALFLLLSGAXXXXXXXXXXXXXXXXXXXXXPTAP----------LLLAAGCHCAYNLTSFLLLARVSPVTHAVANAMRRLFIIAVALLWFANPVTAANVAGTALACAGVLLYAQ 618
            TN S+  VAVSF HTVKA EP+FSV L+AA LG   S  L A+L+ I AG  +ASATE+S++ AG  +AM SN+ F SRN ++K+  +           D   L  +L+ A                      TA           L++AA C   Y   SF +L RV+PVTH+V N+++R+ +IA ++L F NPV+A N+ GTALA  GV+LY Q
Sbjct:  139 TNVSLGKVAVSFTHTVKALEPVFSVGLSAAFLGAIPSLALCASLIPIIAGVMIASATEVSFNMAGFLSAMGSNLTFQSRNVLSKMFMKGDEMKKL----DYYNLLGVLTIASTVIAIPVALATEFSKMTLANVTAGGMPIQTVGFNLVMAALCFQLYQQLSFSVLERVNPVTHSVGNSLKRVIVIAASVLIFRNPVSATNIGGTALAIFGVILYGQ 350          
BLAST of mRNA_M-pyrifera_M_contig91340.21167.1 vs. uniprot
Match: D8RM66_SELML (TPT domain-containing protein n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RM66_SELML)

HSP 1 Score: 115 bits (287), Expect = 3.220e-27
Identity = 85/212 (40.09%), Postives = 121/212 (57.08%), Query Frame = 1
Query:    1 TNGSMAAVAVSFAHTVKAAEPLFSVALAAALLGQALSRPLLAALLLITAGTALASATELSYSHAGMAAAMASNVLFSSRNAVAKLL---QRPSGPSACAWAEDSVALFLLLSGAXXXXXXXXXXXXXXXXXXXXXPTAPL--LLAAGCHCAYNLTSFLLLARVSPVTHAVANAMRRLFIIAVALLWFANPVTAANVAGTALACAGVLLYAQA 621
            TN S+  VAVSF HT+KA EP FSV L+A  LG+A S  ++A+LL I  G ALAS TE S++ AG  +AMASNV F SRN ++K L   +  S  +   ++  ++  F LL+                           L  L+A  C  +Y   S+++L RVSPVTH+V N ++R+ +I  ++++F  PV+  N  GTALA AGV  Y++A
Sbjct:   86 TNMSLGKVAVSFTHTIKAMEPFFSVLLSAMFLGEAPSAWIIASLLPIVGGVALASLTEASFNWAGFLSAMASNVTFQSRNVLSKKLMVKKEGSLDNINLFSVITILSFFLLAPVTLFFEGVKFTPEYLTSMGLDVKVVMLRALVAGLCFHSYQQVSYMILQRVSPVTHSVGNCVKRVIVIVTSVIFFRTPVSTINALGTALALAGVFAYSRA 297          
BLAST of mRNA_M-pyrifera_M_contig91340.21167.1 vs. uniprot
Match: A0A150H0E5_GONPE (TPT domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H0E5_GONPE)

HSP 1 Score: 115 bits (288), Expect = 3.400e-27
Identity = 90/218 (41.28%), Postives = 119/218 (54.59%), Query Frame = 1
Query:    1 TNGSMAAVAVSFAHTVKAAEPLFSVALAAALLGQALSRPLLAALLLITAGTALASATELSYSHAGMAAAMASNVLFSSRNAVAK-LLQRPSGPSACAWAEDSVALF--------LLLSGAXXXXXXXXXXXXXXXXXXXXXPTAPLL---LAAGCHCAYNLTSFLLLARVSPVTHAVANAMRRLFIIAVALLWFANPVTAANVAGTALACAGVLLYAQ 618
            TN S+ AVAVSF HT+KA EP FSV L+A  LG+  S  +L  LL I  G A+AS TE S++  G  +AM SN+ F SRN ++K L+ R  G  A     D+  LF        LLL  A                     P   L+   LA  C  AY   S+++L RVSPVTH++ N ++R+ +IA ++++F NPV+  N  GTALA AGV  Y Q
Sbjct:  103 TNMSLGAVAVSFTHTIKAMEPFFSVFLSAMFLGEQPSPAVLLTLLPIVGGVAVASMTEASFNWYGFLSAMGSNLTFQSRNVLSKKLMLRKGGEGAL----DNTNLFCCITLLSTLLLMPACLLLEGWQMTPAGLSAMGARDPGQVLVWAALAGLCFHAYQTVSYMILQRVSPVTHSIGNCVKRVVVIAASVVFFRNPVSLQNALGTALALAGVFAYGQ 316          
BLAST of mRNA_M-pyrifera_M_contig91340.21167.1 vs. uniprot
Match: I0YUE7_COCSC (Tpt phosphate/phosphoenolpyruvate translocator n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YUE7_COCSC)

HSP 1 Score: 114 bits (285), Expect = 7.050e-27
Identity = 82/213 (38.50%), Postives = 121/213 (56.81%), Query Frame = 1
Query:    1 TNGSMAAVAVSFAHTVKAAEPLFSVALAAALLGQALSRPLLAALLLITAGTALASATELSYSHAGMAAAMASNVLFSSRNAVAKLL---QRPSGPSACAWAEDSVALFLLLSGAXXXXXXXXXXXXXXXXXXXXXPTAPLL----LAAGCHCAYNLTSFLLLARVSPVTHAVANAMRRLFIIAVALLWFANPVTAANVAGTALACAGVLLYAQ 618
            TN S+  VAVSF HT+KA EP FSV L+A  LG++ S P++ +LL +  G ALASATE +++ AG  AAM SN+ F SRN  +K     ++ S  +   ++  ++  FLLL+                        T  +L     A  C  AY   S+++L RVSPVTH++ N ++R+ +I  ++L+F NP+   N+ GTA+A AGV  Y+Q
Sbjct:   86 TNVSLGQVAVSFTHTIKAMEPFFSVLLSALFLGESPSIPIVLSLLPVVGGVALASATEATFNWAGFLAAMGSNITFQSRNVFSKKFMGKKKGSLDNINLFSLITILSFLLLAPIALIRDGGLMLTPSAMQSMGIINTKLVLQRAVFAGFCFHAYQQVSYMILQRVSPVTHSIGNCLKRVIVIVASVLFFQNPMGRQNMIGTAIALAGVFAYSQ 298          
BLAST of mRNA_M-pyrifera_M_contig91340.21167.1 vs. uniprot
Match: J3MSC5_ORYBR (TPT domain-containing protein n=3 Tax=Oryzeae TaxID=147380 RepID=J3MSC5_ORYBR)

HSP 1 Score: 112 bits (280), Expect = 1.160e-26
Identity = 88/219 (40.18%), Postives = 120/219 (54.79%), Query Frame = 1
Query:    1 TNGSMAAVAVSFAHTVKAAEPLFSVALAAALLGQALSRPLLAALLLITAGTALASATELSYSHAGMAAAMASNVLFSSRNAVAKLLQRPSGPSACAWAEDSVALFLLLSGAXXXXXXXXXXXXXXXXXXXXXPTA-------------PLLLAAGCHCAYNLTSFLLLARVSPVTHAVANAMRRLFIIAVALLWFANPVTAANVAGTALACAGVLLYAQ 618
            TN S+  VAVSF HT+KA EP FSV L+A  LG+  +  ++ +LL I  G ALAS TE S++ AG  +AMASNV F SRN ++K L      S      D++ LF +++                       PTA                LAA C  AY   S+++LARVSPVTH+V N ++R+ +I  ++L+F  PV+  N  GTA+A AGV LY+Q
Sbjct:   34 TNMSLGKVAVSFTHTIKAMEPFFSVLLSALFLGELPTVWVVLSLLPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKEESL-----DNINLFSIIT---VMSFFLLAPVAFLTEGIKITPTALQSAGLNVKQVLTRSFLAALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVTSVLFFRTPVSPINSLGTAIALAGVFLYSQ 244          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91340.21167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A4RTU5_OSTLU5.550e-3040.55DMT family transporter: phosphate/phosphoenolpyruv... [more]
Q01D95_OSTTA1.940e-2940.55Triose phosphate/phosphoenolpyruvate translocator ... [more]
A0A7S1SP31_9CHLO5.550e-2939.91Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A250X7Z0_9CHLO1.750e-2837.56TPT domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A7S0PPV3_9CHLO3.650e-2838.86Hypothetical protein n=5 Tax=Ostreococcus mediterr... [more]
A0A090M166_OSTTA1.120e-2741.20Triose-phosphate transporter domain n=2 Tax=Ostreo... [more]
D8RM66_SELML3.220e-2740.09TPT domain-containing protein n=5 Tax=Selaginella ... [more]
A0A150H0E5_GONPE3.400e-2741.28TPT domain-containing protein n=1 Tax=Gonium pecto... [more]
I0YUE7_COCSC7.050e-2738.50Tpt phosphate/phosphoenolpyruvate translocator n=1... [more]
J3MSC5_ORYBR1.160e-2640.18TPT domain-containing protein n=3 Tax=Oryzeae TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91340contigM-pyrifera_M_contig91340:24..701 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score120.2
Seed ortholog evalue1.3e-24
Seed eggNOG ortholog70448.Q01D95
KEGG rclassRC00017
KEGG koko:K05287,ko:K15283
KEGG TC2.A.7.9
KEGG ReactionR05923,R05924,R08107
KEGG Pathwayko00563,ko01100,map00563,map01100
KEGG ModuleM00065
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006810,GO:0006811,GO:0006820,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0008643,GO:0009507,GO:0009526,GO:0009528,GO:0009536,GO:0009670,GO:0009941,GO:0015075,GO:0015120,GO:0015121,GO:0015144,GO:0015291,GO:0015297,GO:0015301,GO:0015318,GO:0015355,GO:0015605,GO:0015711,GO:0015713,GO:0015714,GO:0015717,GO:0015718,GO:0015748,GO:0015849,GO:0016020,GO:0019866,GO:0022804,GO:0022857,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0034219,GO:0034220,GO:0035436,GO:0042170,GO:0042873,GO:0042879,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071917,GO:0089721,GO:0089722,GO:0098656,GO:0099516,GO:1901264,GO:1901505,GO:1903825,GO:1905039
EggNOG free text desc.phosphate phosphoenolpyruvate translocator
EggNOG OGs34JEM@3041,37IB1@33090,KOG1441@1,KOG1441@2759
COG Functional cat.EG
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Exons1
Model size678
Cds size666
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816826.0433424-UTR-M-pyrifera_M_contig91340:23..351622816826.0433424-UTR-M-pyrifera_M_contig91340:23..35Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig91340 24..35 +
1692278201.0234585-UTR-M-pyrifera_M_contig91340:23..351692278201.0234585-UTR-M-pyrifera_M_contig91340:23..35Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig91340 24..35 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816826.0581925-CDS-M-pyrifera_M_contig91340:35..7011622816826.0581925-CDS-M-pyrifera_M_contig91340:35..701Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91340 36..701 +
1692278201.0352733-CDS-M-pyrifera_M_contig91340:35..7011692278201.0352733-CDS-M-pyrifera_M_contig91340:35..701Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91340 36..701 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91340.21167.1prot_M-pyrifera_M_contig91340.21167.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91340 36..701 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91340.21167.1

>prot_M-pyrifera_M_contig91340.21167.1 ID=prot_M-pyrifera_M_contig91340.21167.1|Name=mRNA_M-pyrifera_M_contig91340.21167.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=222bp
MAAVAVSFAHTVKAAEPLFSVALAAALLGQALSRPLLAALLLITAGTALA
SATELSYSHAGMAAAMASNVLFSSRNAVAKLLQRPSGPSACAWAEDSVAL
FLLLSGAGAALLLPPWAARQALGGGGGGPTAPLLLAAGCHCAYNLTSFLL
LARVSPVTHAVANAMRRLFIIAVALLWFANPVTAANVAGTALACAGVLLY
AQATHWLRQRQQHAKPPPLYV*
back to top

mRNA from alignment at M-pyrifera_M_contig91340:24..701+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91340.21167.1 ID=mRNA_M-pyrifera_M_contig91340.21167.1|Name=mRNA_M-pyrifera_M_contig91340.21167.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig91340:24..701+ (Macrocystis pyrifera P11B4 male)
ACCAACGGCAGCATGGCGGCCGTCGCCGTCTCCTTCGCGCACACCGTCAA GGCCGCGGAGCCGCTCTTCTCCGTGGCGCTGGCGGCGGCGCTGCTGGGGC AGGCGCTGTCGCGGCCGCTGCTGGCCGCCCTGCTGCTCATCACCGCAGGC ACCGCCCTCGCCTCTGCCACGGAGCTCTCCTACTCGCACGCGGGCATGGC CGCGGCCATGGCCAGCAACGTGCTCTTCTCCTCGCGCAACGCCGTCGCCA AGCTGCTGCAGCGGCCCTCCGGCCCCTCCGCCTGTGCGTGGGCGGAGGAC AGCGTTGCGCTCTTTCTGCTGCTGAGCGGCGCCGGCGCTGCGCTGCTGCT GCCGCCCTGGGCCGCGCGCCAGGCGCTGGGCGGCGGGGGCGGGGGCCCCA CGGCGCCGCTGCTGCTGGCCGCCGGCTGCCACTGCGCCTACAACCTCACC AGCTTCCTGCTGCTGGCCCGCGTCTCGCCCGTCACCCACGCCGTCGCCAA CGCCATGCGCCGCCTCTTCATCATCGCCGTGGCCCTCCTGTGGTTCGCCA ACCCCGTCACCGCCGCAAACGTCGCCGGCACCGCGCTGGCCTGCGCCGGA GTGCTGCTCTACGCACAGGCAACCCATTGGCTGCGCCAGCGCCAGCAGCA CGCCAAGCCGCCGCCGCTCTACGTCTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig91340:24..701+

>mRNA_M-pyrifera_M_contig91340.21167.1 ID=mRNA_M-pyrifera_M_contig91340.21167.1|Name=mRNA_M-pyrifera_M_contig91340.21167.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1332bp|location=Sequence derived from alignment at M-pyrifera_M_contig91340:24..701+ (Macrocystis pyrifera P11B4 male)
ATGGCGGCCGTCGCCGTCTCCTTCGCGCACACCGTCAAGGCCGCGGAGCC
GCTCTTCTCCGTGGCGCTGGCGGCGGCGCTGCTGGGGCAGGCGCTGTCGC
GGCCGCTGCTGGCCGCCCTGCTGCTCATCACCGCAGGCACCGCCCTCGCC
TCTGCCACGGAGCTCTCCTACTCGCACGCGGGCATGGCCGCGGCCATGGC
CAGCAACGTGCTCTTCTCCTCGCGCAACGCCGTCGCCAAGCTGCTGCAGC
GGCCCTCCGGCCCCTCCGCCTGTGCGTGGGCGGAGGACAGCGTTGCGCTC
TTTCTGCTGCTGAGCGGCGCCGGCGCTGCGCTGCTGCTGCCGCCCTGGGC
CGCGCGCCAGGCGCTGGGCGGCGGGGGCGGGGGCCCCACGGCGCCGCTGC
TGCTGGCCGCCGGCTGCCACTGCGCCTACAACCTCACCAGCTTCCTGCTG
CTGGCCCGCGTCTCGCCCGTCACCCACGCCGTCGCCAACGCCATGCGCCG
CCTCTTCATCATCGCCGTGGCCCTCCTGTGGTTCGCCAACCCCGTCACCG
CCGCAAACGTCGCCGGCACCGCGCTGGCCTGCGCCGGAGTGCTGCTCTAC
GCACAGGCAACCCATTGGCTGCGCCAGCGCCAGCAGCACGCCAAGCCGCC
GCCGCTCTACGTCTAGATGGCGGCCGTCGCCGTCTCCTTCGCGCACACCG
TCAAGGCCGCGGAGCCGCTCTTCTCCGTGGCGCTGGCGGCGGCGCTGCTG
GGGCAGGCGCTGTCGCGGCCGCTGCTGGCCGCCCTGCTGCTCATCACCGC
AGGCACCGCCCTCGCCTCTGCCACGGAGCTCTCCTACTCGCACGCGGGCA
TGGCCGCGGCCATGGCCAGCAACGTGCTCTTCTCCTCGCGCAACGCCGTC
GCCAAGCTGCTGCAGCGGCCCTCCGGCCCCTCCGCCTGTGCGTGGGCGGA
GGACAGCGTTGCGCTCTTTCTGCTGCTGAGCGGCGCCGGCGCTGCGCTGC
TGCTGCCGCCCTGGGCCGCGCGCCAGGCGCTGGGCGGCGGGGGCGGGGGC
CCCACGGCGCCGCTGCTGCTGGCCGCCGGCTGCCACTGCGCCTACAACCT
CACCAGCTTCCTGCTGCTGGCCCGCGTCTCGCCCGTCACCCACGCCGTCG
CCAACGCCATGCGCCGCCTCTTCATCATCGCCGTGGCCCTCCTGTGGTTC
GCCAACCCCGTCACCGCCGCAAACGTCGCCGGCACCGCGCTGGCCTGCGC
CGGAGTGCTGCTCTACGCACAGGCAACCCATTGGCTGCGCCAGCGCCAGC
AGCACGCCAAGCCGCCGCCGCTCTACGTCTAG
back to top