mRNA_M-pyrifera_M_contig91277.21153.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91277.21153.1
Unique NamemRNA_M-pyrifera_M_contig91277.21153.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91277.21153.1 vs. uniprot
Match: A0A518FYU9_9PLAN (DNA helicase n=7 Tax=Gimesia TaxID=1649453 RepID=A0A518FYU9_9PLAN)

HSP 1 Score: 490 bits (1261), Expect = 3.310e-168
Identity = 248/260 (95.38%), Postives = 251/260 (96.54%), Query Frame = 1
Query:    1 DLFAPLAPPPRAAACHDTGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSREHAASARSRSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHVEALKQLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDGAGLTVVGD 780
            DLF  L P  R AACHD+GSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSRE AASARSRSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHV+ LK+LFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDG GLTVVGD
Sbjct:   10 DLFEQLNPQQREAACHDSGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSRERAASARSRSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHVDILKKLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDGTGLTVVGD 269          
BLAST of mRNA_M-pyrifera_M_contig91277.21153.1 vs. uniprot
Match: A0A518AG03_9PLAN (DNA helicase n=15 Tax=Planctomycetaceae TaxID=126 RepID=A0A518AG03_9PLAN)

HSP 1 Score: 489 bits (1259), Expect = 6.640e-168
Identity = 248/260 (95.38%), Postives = 250/260 (96.15%), Query Frame = 1
Query:    1 DLFAPLAPPPRAAACHDTGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSREHAASARSRSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHVEALKQLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDGAGLTVVGD 780
            DLF  L P  R AACHD GSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSRE AASARSRSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHV+ LK+LFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDG GLTVVGD
Sbjct:   10 DLFEQLNPQQREAACHDAGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSRERAASARSRSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHVDILKKLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDGEGLTVVGD 269          
BLAST of mRNA_M-pyrifera_M_contig91277.21153.1 vs. uniprot
Match: A0A3D1DLQ6_9PLAN (DNA helicase n=3 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D1DLQ6_9PLAN)

HSP 1 Score: 310 bits (793), Expect = 6.630e-98
Identity = 157/255 (61.57%), Postives = 189/255 (74.12%), Query Frame = 1
Query:   16 LAPPPRAAACHDTGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSREHAASARSRSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHVEALKQLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDGAGLTVVGD 780
            L PP R AACH    LLI+AGAGTGKTTTL+HRVAWLI +G DPSRILLLTF+RRA+ EM+RRV+A+LR +       A   +R +WGGTFHS A RLLRR+G+ I LP +F+I+DR D+EDLM+SLR+EL LG    +FP+KGT   IYSR VNT   L  VLE  +PWC E ++ L +LF A+VDRKE Q+ LD+DDLL+FW AL  DP  G  +R  F+ VLVDEYQDTN LQS +LK LCPDG GLT VGD
Sbjct:   15 LNPPQREAACHGPSPLLIVAGAGTGKTTTLAHRVAWLIHEGTDPSRILLLTFTRRASAEMLRRVEAILRQLESGPGGTAQGSTR-VWGGTFHSIATRLLRRFGRMIELPSEFSILDRGDSEDLMASLRNELGLGETGRRFPKKGTCAAIYSRVVNTQTSLREVLENSFPWCAEDLDGLGELFAAYVDRKEIQHCLDFDDLLVFWEALLDDPGAGPAVRKLFDCVLVDEYQDTNRLQSRLLKGLCPDGVGLTAVGD 268          
BLAST of mRNA_M-pyrifera_M_contig91277.21153.1 vs. uniprot
Match: A0A7X7ITE9_9BACT (DNA helicase (Fragment) n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7ITE9_9BACT)

HSP 1 Score: 301 bits (772), Expect = 1.350e-97
Identity = 155/259 (59.85%), Postives = 191/259 (73.75%), Query Frame = 1
Query:    4 LFAPLAPPPRAAACHDTGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSREHAASARSRSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHVEALKQLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDGAGLTVVGD 780
            + A L P  R A  H  G LLIIAGAGTGKT TL HRVAWLI QG +P RILLLTF+RRAA EM+RRVD  LR +  S   A+++R   +WGGTFH+ A RLLR++G++IGL D F++ DR D+EDLM+ +R+ L L     +FP+KGT + IYSRCVN+  KLE VL+R +PWC +  + LKQLF  +VDRKE   +LDYDDLLLFWHAL +D + G L+R +F+ VLVDEYQDTN LQS I+  LCPDG GLTVVGD
Sbjct:   10 ILAHLNPQQREAVTHGQGPLLIIAGAGTGKTATLVHRVAWLIHQGTNPGRILLLTFTRRAAAEMLRRVDGALRHIAGSSSSASTSR---VWGGTFHAVATRLLRQHGKAIGLHDGFSVHDRGDSEDLMNVVRTSLGLAKTDRRFPKKGTCMAIYSRCVNSRAKLEDVLDRAFPWCRQWEKELKQLFNEYVDRKESLAVLDYDDLLLFWHALLADKSVGPLIRDRFDCVLVDEYQDTNRLQSEIIYELCPDGRGLTVVGD 265          
BLAST of mRNA_M-pyrifera_M_contig91277.21153.1 vs. uniprot
Match: A0A2I6QHX3_9BACT (DNA helicase n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A2I6QHX3_9BACT)

HSP 1 Score: 307 bits (786), Expect = 1.370e-96
Identity = 156/264 (59.09%), Postives = 197/264 (74.62%), Query Frame = 1
Query:    1 DLFAPLAPPPRAAACHDTGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSREHAASARSR----SIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHVEALKQLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDGAGLTVVGD 780
            D+ + L    RAAA H  G LLI+AGAGTGKTTTL+HRVA LI+ G DP+RILLLTF+RRAA EM+RRVDA+L+ +G+    A S  +R      WGGTFHS A RLLR++G+ IGL  +FTI+DR D+EDLM+ LR EL L  +  +FP KGT ++IYSRCVNT  +L  VL   +PWC++H + LK+LF+ +VDRKE Q +LDYDDLLLFW+AL +DP  G  +R +F+ VLVDEYQDTN LQ+ I++ L PDG GLTVVGD
Sbjct:   32 DVLSDLNTQQRAAATHGNGPLLIVAGAGTGKTTTLAHRVANLIAGGADPARILLLTFTRRAAAEMLRRVDAILQRLGEKGASAGSTAARLATRKTWGGTFHSVATRLLRQHGRLIGLEAEFTILDRGDSEDLMNVLRGELNLPKSETRFPLKGTCLDIYSRCVNTQFELSRVLNESFPWCIDHAQLLKELFRNYVDRKESQAVLDYDDLLLFWNALVNDPEAGPTIRDKFDHVLVDEYQDTNTLQADIVRGLSPDGQGLTVVGD 295          
BLAST of mRNA_M-pyrifera_M_contig91277.21153.1 vs. uniprot
Match: A0A3D3W442_9PLAN (DNA helicase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D3W442_9PLAN)

HSP 1 Score: 295 bits (755), Expect = 2.060e-96
Identity = 151/262 (57.63%), Postives = 195/262 (74.43%), Query Frame = 1
Query:    7 FAPLAPPPRAAACHDTGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMG--DSREHAASARS--RSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHVEALKQLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDGAGLTVVGD 780
             A L P   AAA H T  LLIIAGAGTGKTTTL+HRVAW ++ G DP+ I+LLTF+RRAA EM+RRV+ +   +G  + R+ A   +S  R I GGTFHS A+ LLRR+G  IGL  DFTI+DR D+EDL++  R+EL+L  +  +FP KGT ++IYSRC+NT  +L  VLE+++PWCLEH   L +LF  + + KE+Q +LD+DDLLLFW+AL++D +G ++ R QF  +LVDEYQDTNVLQ+ ILKNLCPDG GLT VGD
Sbjct:   14 LASLNPQQLAAAMHGTAPLLIIAGAGTGKTTTLAHRVAWQVASGTDPASIMLLTFTRRAAAEMLRRVEQITSTLGAGEVRDTALVQKSAIRRICGGTFHSAASALLRRHGHLIGLHPDFTIMDRGDSEDLLNLARTELKLPKSENRFPLKGTCLDIYSRCINTQQELPRVLEQWFPWCLEHQSRLGELFNLYTETKERQRVLDFDDLLLFWNALAADESGARVFRQQFSRILVDEYQDTNVLQAQILKNLCPDGIGLTAVGD 275          
BLAST of mRNA_M-pyrifera_M_contig91277.21153.1 vs. uniprot
Match: A0A518CIZ5_9PLAN (DNA helicase n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CIZ5_9PLAN)

HSP 1 Score: 302 bits (774), Expect = 5.120e-95
Identity = 146/251 (58.17%), Postives = 192/251 (76.49%), Query Frame = 1
Query:   31 RAAACHDTGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSREHAASAR-SRSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHVEALKQLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDGAGLTVVGD 780
            R A  HD   LLI+AGAGTGKTTTL+HRVAWLI+ G+DP RI+LLTF+RRAANEM+RRV+A+L  +    +     R  R +WGGTFHS +AR+LR+YG ++GL   FTI+DR+D+EDL+  LR ++ L ++  +FP KGT ++IYSRC+N+  +LE VL+  +PWC E+ + LK LF+AFVDRKE Q +LDYDDLL+FW AL     G +++R QF+AVL+DEYQDTNVLQS IL+ L P+G G+TVVGD
Sbjct:   21 RVAVEHDLNPLLIVAGAGTGKTTTLAHRVAWLIATGVDPRRIMLLTFTRRAANEMLRRVEAILSGLDHHADRTGRKRPGRGVWGGTFHSISARMLRKYGNALGLDSQFTILDRTDSEDLLQLLRIDMNLADSKKRFPLKGTCLDIYSRCMNSQRRLEEVLQFDFPWCAEYQDELKGLFRAFVDRKELQGVLDYDDLLVFWRALLDSDTGAEMIRSQFDAVLIDEYQDTNVLQSSILQLLSPEGQGVTVVGD 271          
BLAST of mRNA_M-pyrifera_M_contig91277.21153.1 vs. uniprot
Match: A0A2E7NLJ7_9PLAN (DNA helicase n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7NLJ7_9PLAN)

HSP 1 Score: 301 bits (772), Expect = 8.830e-95
Identity = 155/255 (60.78%), Postives = 187/255 (73.33%), Query Frame = 1
Query:   16 LAPPPRAAACHDTGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSREHAASARSRSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHVEALKQLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDGAGLTVVGD 780
            L PP R AA H    LLI+AGAGTGKTTTL+HRVAWLI +G D SRILLLTF+RRA+ EM+RRV+A+LR + DS     +A S  +WGGTFHS A RLLRR+G+ I LP +F+I+DR D+EDLM+SLR+EL LG    +FP+KGT   IYSR VNT   L  VLE  +PWC E ++ L +LF A+VDRKE Q+ LD+DDLL+FW AL  DP  G  +R  F+ VLVDEYQDTN LQ  +LK LCP G GLT VGD
Sbjct:   15 LNPPQRQAAXHGDSPLLIVAGAGTGKTTTLAHRVAWLIHEGTDASRILLLTFTRRASAEMLRRVEAILRQL-DSGRGGGAAGSTRVWGGTFHSIATRLLRRFGRLIELPTEFSILDRGDSEDLMASLRNELGLGETGRRFPKKGTXAAIYSRVVNTQTTLAEVLETAFPWCAEDLDGLGELFAAYVDRKEVQHCLDFDDLLVFWEALLDDPTAGPAIRKXFDCVLVDEYQDTNRLQGRLLKGLCPGGTGLTAVGD 268          
BLAST of mRNA_M-pyrifera_M_contig91277.21153.1 vs. uniprot
Match: A0A2D6SR32_9PLAN (DNA helicase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SR32_9PLAN)

HSP 1 Score: 300 bits (769), Expect = 2.580e-94
Identity = 147/255 (57.65%), Postives = 197/255 (77.25%), Query Frame = 1
Query:   31 RAAACHDTGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSREHAASARS-----RSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHVEALKQLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDGAGLTVVGD 780
            R AA H T  LLI+AGAGTGKTTTL+HRVAW I+ G DP +ILLLTF+RRA+ EMVRRVD +LR +  +R+ A   +S     R +WGGTFHS   R LR++G+ I L  +FTI+DRSD+EDLM+ +R++LEL     +FP KGT + IYSRC+N+  + E +L+R+YPWC+E  + LKQLF+A+ +RKEQQ   DYDDLL+FW+AL ++PA  +L++ +F+AVLVDEYQDTN++Q+ IL++LCP+G GLTVVGD
Sbjct:   18 REAATHGTDPLLIVAGAGTGKTTTLAHRVAWQIATGTDPGKILLLTFTRRASAEMVRRVDGILRELA-ARQQAEGLKSSHLTGRKVWGGTFHSMGTRFLRQHGKLINLKPEFTILDRSDSEDLMNVIRNDLELAKTDKRFPLKGTCMAIYSRCINSQQRPETILKRHYPWCVEQEDGLKQLFKAYTERKEQQGCFDYDDLLVFWNALLAEPACRELIQHRFDAVLVDEYQDTNLIQASILRHLCPEGKGLTVVGD 271          
BLAST of mRNA_M-pyrifera_M_contig91277.21153.1 vs. uniprot
Match: A0A2E8FJP5_9PLAN (DNA helicase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8FJP5_9PLAN)

HSP 1 Score: 299 bits (766), Expect = 6.720e-94
Identity = 156/259 (60.23%), Postives = 190/259 (73.36%), Query Frame = 1
Query:    4 LFAPLAPPPRAAACHDTGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSRILLLTFSRRAANEMVRRVDALLRAMGDSREHAASARSRSIWGGTFHSTAARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLERYYPWCLEHVEALKQLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCPDGAGLTVVGD 780
            + A L  P R A CHD   LLI+AGAGTGKTTTL+HRVAWLI QG DPSRILLLTF+RRAA EM+RRVDA+L+     +  AA + S+ +WGGTFHS AARLLRR+G+ I L  +F+I+DR DAEDLM++LR+EL LG++  +FPRKG  V IYSR VNT   L+ +LE  +PWC E  E L  LF A+VDRK+ Q  LD+DDLL+FW AL +D   G  +R QF+ VLVDEYQDTN LQ+ +L  L P G GLT VGD
Sbjct:   11 VLAELNGPQREATCHDMSPLLIVAGAGTGKTTTLAHRVAWLIHQGTDPSRILLLTFTRRAAAEMLRRVDAILQQTQAGQ--AARSASQRVWGGTFHSVAARLLRRFGKMIDLQPEFSILDRGDAEDLMATLRTELGLGDSGRRFPRKGPCVAIYSRMVNTQTSLQDILETAFPWCAEDAEGLAGLFAAYVDRKQDQYCLDFDDLLVFWDALLADAQAGPSVRRQFDCVLVDEYQDTNRLQADLLDGLSPGGHGLTAVGD 267          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91277.21153.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518FYU9_9PLAN3.310e-16895.38DNA helicase n=7 Tax=Gimesia TaxID=1649453 RepID=A... [more]
A0A518AG03_9PLAN6.640e-16895.38DNA helicase n=15 Tax=Planctomycetaceae TaxID=126 ... [more]
A0A3D1DLQ6_9PLAN6.630e-9861.57DNA helicase n=3 Tax=Planctomycetaceae bacterium T... [more]
A0A7X7ITE9_9BACT1.350e-9759.85DNA helicase (Fragment) n=1 Tax=Pirellulaceae bact... [more]
A0A2I6QHX3_9BACT1.370e-9659.09DNA helicase n=1 Tax=uncultured bacterium TaxID=77... [more]
A0A3D3W442_9PLAN2.060e-9657.63DNA helicase (Fragment) n=1 Tax=Planctomycetaceae ... [more]
A0A518CIZ5_9PLAN5.120e-9558.17DNA helicase n=1 Tax=Polystyrenella longa TaxID=25... [more]
A0A2E7NLJ7_9PLAN8.830e-9560.78DNA helicase n=2 Tax=Planctomycetaceae bacterium T... [more]
A0A2D6SR32_9PLAN2.580e-9457.65DNA helicase n=1 Tax=Planctomycetaceae bacterium T... [more]
A0A2E8FJP5_9PLAN6.720e-9460.23DNA helicase n=1 Tax=Planctomycetaceae bacterium T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91277contigM-pyrifera_M_contig91277:1..780 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score460.7
Seed ortholog evalue4.6e-127
Seed eggNOG ortholog344747.PM8797T_11546
Preferred namepcrA
KEGG koko:K03657
KEGG Pathwayko03420,ko03430,map03420,map03430
Hectar predicted targeting categoryother localisation
EggNOG free text desc.UvrD-like helicase C-terminal domain
EggNOG OGs2IY8S@203682,COG0210@1,COG0210@2
EC3.6.4.12
COG Functional cat.L
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Exons1
Model size780
Cds size780
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816825.1988308-CDS-M-pyrifera_M_contig91277:0..7801622816825.1988308-CDS-M-pyrifera_M_contig91277:0..780Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91277 1..780 -
1692278200.558448-CDS-M-pyrifera_M_contig91277:0..7801692278200.558448-CDS-M-pyrifera_M_contig91277:0..780Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91277 1..780 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91277.21153.1prot_M-pyrifera_M_contig91277.21153.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91277 1..780 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91277.21153.1

>prot_M-pyrifera_M_contig91277.21153.1 ID=prot_M-pyrifera_M_contig91277.21153.1|Name=mRNA_M-pyrifera_M_contig91277.21153.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=260bp
DLFAPLAPPPRAAACHDTGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPS
RILLLTFSRRAANEMVRRVDALLRAMGDSREHAASARSRSIWGGTFHSTA
ARLLRRYGQSIGLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGT
LVEIYSRCVNTCLKLEPVLERYYPWCLEHVEALKQLFQAFVDRKEQQNIL
DYDDLLLFWHALSSDPAGGKLLRGQFEAVLVDEYQDTNVLQSGILKNLCP
DGAGLTVVGD
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mRNA from alignment at M-pyrifera_M_contig91277:1..780-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91277.21153.1 ID=mRNA_M-pyrifera_M_contig91277.21153.1|Name=mRNA_M-pyrifera_M_contig91277.21153.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig91277:1..780- (Macrocystis pyrifera P11B4 male)
GACCTGTTCGCGCCGCTTGCCCCCCCGCCACGGGCGGCGGCCTGTCACGA TACCGGTTCGCTGTTGATCATCGCCGGTGCGGGAACGGGAAAGACGACCA CGCTTTCACACCGGGTGGCCTGGCTGATTTCGCAGGGCATCGATCCGAGC CGGATTCTATTGCTGACCTTCTCCCGCAGAGCCGCGAATGAGATGGTCCG CCGCGTCGATGCACTGTTGCGGGCGATGGGCGATAGTCGCGAACATGCTG CCTCGGCTCGCTCACGGAGCATCTGGGGAGGTACGTTCCACTCTACGGCA GCGCGTCTACTGAGACGCTACGGTCAGTCGATCGGTCTGCCGGATGACTT TACGATCATCGATCGCAGCGACGCCGAAGACCTGATGAGCTCTCTACGGA GTGAACTCGAACTGGGAAACAACGTGGCCAAGTTTCCCCGCAAAGGGACA CTGGTCGAGATTTACAGCCGTTGTGTGAATACCTGCCTCAAGCTGGAGCC GGTACTCGAACGGTATTACCCCTGGTGCCTGGAACATGTAGAGGCACTCA AGCAGCTGTTTCAGGCGTTCGTCGATCGTAAGGAGCAGCAGAACATACTC GACTATGACGATCTGCTCCTGTTCTGGCACGCACTCTCTTCCGATCCCGC GGGAGGTAAACTGCTGCGAGGTCAGTTCGAAGCGGTGCTGGTGGACGAGT ACCAGGACACGAACGTATTACAGTCCGGCATCCTGAAAAATCTCTGTCCC GATGGCGCAGGTCTGACGGTGGTGGGCGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91277:1..780-

>mRNA_M-pyrifera_M_contig91277.21153.1 ID=mRNA_M-pyrifera_M_contig91277.21153.1|Name=mRNA_M-pyrifera_M_contig91277.21153.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1560bp|location=Sequence derived from alignment at M-pyrifera_M_contig91277:1..780- (Macrocystis pyrifera P11B4 male)
GACCTGTTCGCGCCGCTTGCCCCCCCGCCACGGGCGGCGGCCTGTCACGA
TACCGGTTCGCTGTTGATCATCGCCGGTGCGGGAACGGGAAAGACGACCA
CGCTTTCACACCGGGTGGCCTGGCTGATTTCGCAGGGCATCGATCCGAGC
CGGATTCTATTGCTGACCTTCTCCCGCAGAGCCGCGAATGAGATGGTCCG
CCGCGTCGATGCACTGTTGCGGGCGATGGGCGATAGTCGCGAACATGCTG
CCTCGGCTCGCTCACGGAGCATCTGGGGAGGTACGTTCCACTCTACGGCA
GCGCGTCTACTGAGACGCTACGGTCAGTCGATCGGTCTGCCGGATGACTT
TACGATCATCGATCGCAGCGACGCCGAAGACCTGATGAGCTCTCTACGGA
GTGAACTCGAACTGGGAAACAACGTGGCCAAGTTTCCCCGCAAAGGGACA
CTGGTCGAGATTTACAGCCGTTGTGTGAATACCTGCCTCAAGCTGGAGCC
GGTACTCGAACGGTATTACCCCTGGTGCCTGGAACATGTAGAGGCACTCA
AGCAGCTGTTTCAGGCGTTCGTCGATCGTAAGGAGCAGCAGAACATACTC
GACTATGACGATCTGCTCCTGTTCTGGCACGCACTCTCTTCCGATCCCGC
GGGAGGTAAACTGCTGCGAGGTCAGTTCGAAGCGGTGCTGGTGGACGAGT
ACCAGGACACGAACGTATTACAGTCCGGCATCCTGAAAAATCTCTGTCCC
GATGGCGCAGGTCTGACGGTGGTGGGCGACGACCTGTTCGCGCCGCTTGC
CCCCCCGCCACGGGCGGCGGCCTGTCACGATACCGGTTCGCTGTTGATCA
TCGCCGGTGCGGGAACGGGAAAGACGACCACGCTTTCACACCGGGTGGCC
TGGCTGATTTCGCAGGGCATCGATCCGAGCCGGATTCTATTGCTGACCTT
CTCCCGCAGAGCCGCGAATGAGATGGTCCGCCGCGTCGATGCACTGTTGC
GGGCGATGGGCGATAGTCGCGAACATGCTGCCTCGGCTCGCTCACGGAGC
ATCTGGGGAGGTACGTTCCACTCTACGGCAGCGCGTCTACTGAGACGCTA
CGGTCAGTCGATCGGTCTGCCGGATGACTTTACGATCATCGATCGCAGCG
ACGCCGAAGACCTGATGAGCTCTCTACGGAGTGAACTCGAACTGGGAAAC
AACGTGGCCAAGTTTCCCCGCAAAGGGACACTGGTCGAGATTTACAGCCG
TTGTGTGAATACCTGCCTCAAGCTGGAGCCGGTACTCGAACGGTATTACC
CCTGGTGCCTGGAACATGTAGAGGCACTCAAGCAGCTGTTTCAGGCGTTC
GTCGATCGTAAGGAGCAGCAGAACATACTCGACTATGACGATCTGCTCCT
GTTCTGGCACGCACTCTCTTCCGATCCCGCGGGAGGTAAACTGCTGCGAG
GTCAGTTCGAAGCGGTGCTGGTGGACGAGTACCAGGACACGAACGTATTA
CAGTCCGGCATCCTGAAAAATCTCTGTCCCGATGGCGCAGGTCTGACGGT
GGTGGGCGAC
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