mRNA_M-pyrifera_M_contig91222.21142.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig91222.21142.1 vs. uniprot
Match: UPI001C899FCD (heparan-sulfate 6-O-sulfotransferase 3-B-like n=1 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C899FCD) HSP 1 Score: 76.3 bits (186), Expect = 2.090e-13 Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 1 Query: 4 LEAFVNCSGPENWAYNRMVRHLA--LDAGCRPRS-WSETQWTAYLLDRAKAALQHAFAFVGLEERRRESEVLFERTFRLSFLSLAKEYHAQSTDAAVAQLPRPLREKIRLGNWADLQLYRFAQTLFHRRLHAI 393 L F++C P N A NR VR LA GC S +E++ LL AK+ L++ AF GL E +R+++ LFERTFRL F+S + + ST AA +L +R +I L N+ D+QLY FA+ LF +R I Sbjct: 238 LHEFMDC--PSNLANNRQVRMLADLSLVGCYNLSTMNESERNPILLASAKSNLKN-MAFYGLTEFQRKTQYLFERTFRLQFISAFTQIN--STRAANVELRDDMRRRIELLNFLDMQLYEFAKELFLQRYQFI 365
BLAST of mRNA_M-pyrifera_M_contig91222.21142.1 vs. uniprot
Match: A0A6P6N7V6_CARAU (Heparan-sulfate 6-O-sulfotransferase n=4 Tax=Cyprinoidei TaxID=30727 RepID=A0A6P6N7V6_CARAU) HSP 1 Score: 73.6 bits (179), Expect = 5.330e-13 Identity = 55/133 (41.35%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 4 LEAFVNCSGPENWAYNRMVRHLA--LDAGCRPRS-WSETQWTAYLLDRAKAALQHAFAFVGLEERRRESEVLFERTFRLSFLSLAKEYHAQSTDAAVAQLPRPLREKIRLGNWADLQLYRFAQTLFHRRLHAI 393 L F++C P N A NR VR LA GC S +E++ LL AK+ L++ AF GL E +R+++ LFERTFRL F+S + + ST AA +L +R +I N+ D+QLY FA+ LF +R I Sbjct: 63 LHEFMDC--PSNLANNRQVRMLADLSLVGCYNLSTMNESERNPILLASAKSNLKN-MAFYGLTEFQRKTQYLFERTFRLRFISAFTQIN--STRAANVELRDDMRRRIEQLNFLDMQLYEFAKELFLQRYQFI 190
BLAST of mRNA_M-pyrifera_M_contig91222.21142.1 vs. uniprot
Match: A0A3B3RUQ2_9TELE (Heparan-sulfate 6-O-sulfotransferase n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3RUQ2_9TELE) HSP 1 Score: 74.7 bits (182), Expect = 7.400e-13 Identity = 54/129 (41.86%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 4 LEAFVNCSGPENWAYNRMVRHLA--LDAGC-RPRSWSETQWTAYLLDRAKAALQHAFAFVGLEERRRESEVLFERTFRLSFLSLAKEYHAQSTDAAVAQLPRPLREKIRLGNWADLQLYRFAQTLFHRR 381 L F++C P N A NR VR LA GC S +E++ + LL AKA L++ AF GL E +R+++ LFERTFRL F+S + + ST AA + +R +I N D+QLY FA+ LF +R Sbjct: 241 LSEFMDC--PSNLANNRQVRMLADLSLVGCYNLSSMNESERSRTLLSSAKANLKN-MAFYGLTEFQRKTQYLFERTFRLCFISAFTQIN--STRAAAVDVAEDVRRRIEALNGLDVQLYEFAKDLFLQR 364
BLAST of mRNA_M-pyrifera_M_contig91222.21142.1 vs. uniprot
Match: A0A5A9P4V5_9TELE (Heparan-sulfate 6-O-sulfotransferase n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9P4V5_9TELE) HSP 1 Score: 72.4 bits (176), Expect = 4.070e-12 Identity = 53/129 (41.09%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 4 LEAFVNCSGPENWAYNRMVRHLA--LDAGCRPRS-WSETQWTAYLLDRAKAALQHAFAFVGLEERRRESEVLFERTFRLSFLSLAKEYHAQSTDAAVAQLPRPLREKIRLGNWADLQLYRFAQTLFHRR 381 L F++C P N A NR VR LA GC S +E++ LL A + L++ AF GL E +R+++ LFERTFRL F+S +++ ST AA +L +R +I N+ D+QLY FA+ LF +R Sbjct: 184 LHEFMDC--PYNLANNRQVRMLADLSLVGCYNLSTMNESERNPILLASAMSNLKN-MAFYGLTEFQRKTQYLFERTFRLRFISAFTQFN--STRAANVELREDMRRRIEKLNFLDMQLYEFAKDLFLQR 307
BLAST of mRNA_M-pyrifera_M_contig91222.21142.1 vs. uniprot
Match: A0A8C9R4T5_SCLFO (Heparan-sulfate 6-O-sulfotransferase n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9R4T5_SCLFO) HSP 1 Score: 72.4 bits (176), Expect = 4.640e-12 Identity = 53/129 (41.09%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 4 LEAFVNCSGPENWAYNRMVRHLA--LDAGCRPRSW-SETQWTAYLLDRAKAALQHAFAFVGLEERRRESEVLFERTFRLSFLSLAKEYHAQSTDAAVAQLPRPLREKIRLGNWADLQLYRFAQTLFHRR 381 L F++C P N A NR VR LA GC S+ SE++ + LL AK L++ AF GL E +R+++ LFERTFRL F+S + + ST AA + +R +I N+ D+QLY +A+ LF +R Sbjct: 222 LREFMDC--PSNLANNRQVRMLADLSLVGCYNLSFMSESERSHILLSSAKTNLRN-MAFFGLTEFQRKTQYLFERTFRLRFISAFTQIN--STRAAGVDVDEDVRRRIDALNFLDVQLYEYAKDLFLQR 345
BLAST of mRNA_M-pyrifera_M_contig91222.21142.1 vs. uniprot
Match: A0A8C9WQ99_SCLFO (Heparan-sulfate 6-O-sulfotransferase n=6 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9WQ99_SCLFO) HSP 1 Score: 72.4 bits (176), Expect = 4.890e-12 Identity = 53/129 (41.09%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 4 LEAFVNCSGPENWAYNRMVRHLA--LDAGCRPRSW-SETQWTAYLLDRAKAALQHAFAFVGLEERRRESEVLFERTFRLSFLSLAKEYHAQSTDAAVAQLPRPLREKIRLGNWADLQLYRFAQTLFHRR 381 L F++C P N A NR VR LA GC S+ SE++ + LL AK L++ AF GL E +R+++ LFERTFRL F+S + + ST AA + +R +I N+ D+QLY +A+ LF +R Sbjct: 248 LREFMDC--PSNLANNRQVRMLADLSLVGCYNLSFMSESERSHILLSSAKTNLRN-MAFFGLTEFQRKTQYLFERTFRLRFISAFTQIN--STRAAGVDVDEDVRRRIDALNFLDVQLYEYAKDLFLQR 371
BLAST of mRNA_M-pyrifera_M_contig91222.21142.1 vs. uniprot
Match: W5KUI2_ASTMX (Heparan-sulfate 6-O-sulfotransferase n=4 Tax=Characoidei TaxID=1489739 RepID=W5KUI2_ASTMX) HSP 1 Score: 72.0 bits (175), Expect = 6.610e-12 Identity = 53/130 (40.77%), Postives = 76/130 (58.46%), Query Frame = 1 Query: 4 LEAFVNCSGPENWAYNRMVRHLA--LDAGC-RPRSWSETQWTAYLLDRAKAALQHAFAFVGLEERRRESEVLFERTFRLSFLSLAKEYHAQSTDAAVAQLPRPLREKIRLGNWADLQLYRFAQTLFHRRL 384 L F++C P N A NR VR LA GC S +E++ LL A + L++ AF GL E +R+++ LFERTFRL F+S + + ST AA +L +R +I N+ D+QLY FA+ LF +R+ Sbjct: 250 LREFMDC--PSNLASNRQVRMLADLSLVGCYNLSSMNESERNPILLASAMSNLKN-MAFYGLTEFQRKTQYLFERTFRLRFISAFTQLN--STRAANVELREDVRRRIERLNFLDVQLYEFAKDLFLQRV 374
BLAST of mRNA_M-pyrifera_M_contig91222.21142.1 vs. uniprot
Match: A0A8C9QW32_SCLFO (Heparan-sulfate 6-O-sulfotransferase n=3 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9QW32_SCLFO) HSP 1 Score: 71.6 bits (174), Expect = 8.660e-12 Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 4 LEAFVNCSGPENWAYNRMVRHLA--LDAGCRPRSW-SETQWTAYLLDRAKAALQHAFAFVGLEERRRESEVLFERTFRLSFLSLAKEYHAQSTDAAVAQLPRPLREKIRLGNWADLQLYRFAQTLFHRRLHAI 393 L F++CS N A NR VR LA GC S+ SE++ + LL AK L++ AF GL E +R+++ LFERTFRL F+S + + ST AA + +R++I N D+QLY +A+ LF +R + Sbjct: 222 LHDFMDCSS--NLANNRQVRMLADLSLVGCYNLSFMSESERSHILLSSAKTNLRN-MAFFGLTEFQRKTQYLFERTFRLRFISAFTQIN--STRAAGVDVGEDVRQRIEALNMLDVQLYEYAKDLFLQRFQYV 349
BLAST of mRNA_M-pyrifera_M_contig91222.21142.1 vs. uniprot
Match: UPI0007402CEA (heparan-sulfate 6-O-sulfotransferase 2-like n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=UPI0007402CEA) HSP 1 Score: 67.8 bits (164), Expect = 1.450e-10 Identity = 52/129 (40.31%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 4 LEAFVNCSGPENWAYNRMVRHLA--LDAGC-RPRSWSETQWTAYLLDRAKAALQHAFAFVGLEERRRESEVLFERTFRLSFLSLAKEYHAQSTDAAVAQLPRPLREKIRLGNWADLQLYRFAQTLFHRR 381 LE F+ C P N A NR R LA GC + SE LLD AK LQ AF GL E +R+++ LFERTFR++F+S + + ST A+ ++ + +IR N D++LY FA+ LF +R Sbjct: 92 LEEFMGC--PHNLANNRQARMLADLSLVGCYNLTAMSEEARGRVLLDSAKRNLQ-GMAFFGLTEFQRKTQYLFERTFRMAFISPFTQLN--STRASGVEVAAAAQARIRRLNGLDVELYDFARDLFLQR 215
BLAST of mRNA_M-pyrifera_M_contig91222.21142.1 vs. uniprot
Match: A0A8J1UGU0_OWEFU (Heparan-sulfate 6-O-sulfotransferase n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UGU0_OWEFU) HSP 1 Score: 66.6 bits (161), Expect = 5.240e-10 Identity = 48/135 (35.56%), Postives = 72/135 (53.33%), Query Frame = 1 Query: 4 LEAFVNCSGPENWAYNRMVRHLA--LDAGCRPRS-WSETQWTAYLLDRAKAALQHAFAFVGLEERRRESEVLFERTFRLSFLSLAKEYHAQSTDAAVAQLPRPLREKIRLGNWADLQLYRFAQTLFHRRLHAIVG 399 L F+ C P N A NR R LA A C S S+T+ +L+ AK L AF GL E +R ++++FE TF++ F++ +Y+ +L E+I+ N D++LY++A+TLF RLHA G Sbjct: 254 LNEFIKC--PYNLANNRQARMLADLSLAKCYDTSAMSKTERDKVILESAKQNLLD-MAFFGLTEYQRYTQMMFEDTFKIKFINDFIQYNETHASDVTEKLSSEDIEEIQKINHLDIELYKYAKTLFFERLHAKFG 385 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91222.21142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig91222.21142.1 >prot_M-pyrifera_M_contig91222.21142.1 ID=prot_M-pyrifera_M_contig91222.21142.1|Name=mRNA_M-pyrifera_M_contig91222.21142.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp PLEAFVNCSGPENWAYNRMVRHLALDAGCRPRSWSETQWTAYLLDRAKAAback to top mRNA from alignment at M-pyrifera_M_contig91222:155..601+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig91222.21142.1 ID=mRNA_M-pyrifera_M_contig91222.21142.1|Name=mRNA_M-pyrifera_M_contig91222.21142.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig91222:155..601+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig91222:155..601+ >mRNA_M-pyrifera_M_contig91222.21142.1 ID=mRNA_M-pyrifera_M_contig91222.21142.1|Name=mRNA_M-pyrifera_M_contig91222.21142.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig91222:155..601+ (Macrocystis pyrifera P11B4 male)back to top |