mRNA_M-pyrifera_M_contig91220.21141.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91220.21141.1
Unique NamemRNA_M-pyrifera_M_contig91220.21141.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91220.21141.1 vs. uniprot
Match: A0A5A8CG25_CAFRO (IPPc domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CG25_CAFRO)

HSP 1 Score: 116 bits (290), Expect = 1.570e-28
Identity = 49/74 (66.22%), Postives = 58/74 (78.38%), Query Frame = 1
Query:    1 KGAGITDSVPSWCDRILFHSLPSRQDDLLPESTDPSDPDAPHNYRAVNDGMDISDHSPVFCTWTLNALINPHDK 222
            KG    + VPSW DRI+F SLPSR D+LLPES DP +PDAPHNYR VN G D+SDH+PVFCTWTL  L++P D+
Sbjct:  446 KGGRTVERVPSWTDRIMFRSLPSRADNLLPESLDPDNPDAPHNYRCVNHGCDLSDHAPVFCTWTLRILLDPVDE 519          
BLAST of mRNA_M-pyrifera_M_contig91220.21141.1 vs. uniprot
Match: A0A813A7H8_9DINO (INPP5D protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A7H8_9DINO)

HSP 1 Score: 99.8 bits (247), Expect = 1.010e-22
Identity = 46/75 (61.33%), Postives = 53/75 (70.67%), Query Frame = 1
Query:    1 KGAGITDSVPSWCDRILFHSLPSRQDDLLPESTDPSDPD-APHNYRAVNDGMDISDHSPVFCTWTLNALINPHDK 222
            KG  + D +PSW DRI +HSLPSR   L PE  DPS PD +PHNY AVNDGMDISDHSPVF T+ L+  I   D+
Sbjct:  426 KGGRVVDRIPSWTDRIQYHSLPSRMGTLAPELLDPSAPDTSPHNYHAVNDGMDISDHSPVFATFQLDVTIQDIDQ 500          
BLAST of mRNA_M-pyrifera_M_contig91220.21141.1 vs. uniprot
Match: F0WVH2_9STRA (Uncharacterized protein AlNc14C296G10307 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WVH2_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.200e-13
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 1
Query:    1 KGAGITDSVPSWCDRILFHSLPSRQDDLLPESTDPSDPDAP-HNYRAVN--DGMDISDHSPVFCTWTLNALINPHDKER 228
            KG  I   VP WCDRIL HSL   +  L+PE       + P  NYR+VN  +GMD+SDHSPV+ T+ L+    PH+K R
Sbjct:  662 KGGKIKTRVPGWCDRILSHSLLVSESKLMPEKVSIEQGNTPIDNYRSVNHGEGMDVSDHSPVYATFVLSF---PHEKSR 737          
BLAST of mRNA_M-pyrifera_M_contig91220.21141.1 vs. uniprot
Match: K3WZF9_GLOUD (IPPc domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZF9_GLOUD)

HSP 1 Score: 71.2 bits (173), Expect = 1.050e-12
Identity = 39/91 (42.86%), Postives = 49/91 (53.85%), Query Frame = 1
Query:    1 KGAGITDSVPSWCDRILFHSLPSRQDDLLPESTDPSDPDAP---HNYRAVN--DGMDISDHSPVFCTWTLN----------ALINPHDKER 228
            KG  +   VP WCDRIL HSL      L+PE  +    D P    NYR+VN  +GMD+SDHSPVF T+ L+          A ++PH   R
Sbjct:  803 KGGKVKKRVPGWCDRILVHSLLVSDSKLMPEKVESPFDDQPTWIDNYRSVNHGNGMDVSDHSPVFATFVLSFPCLGKDKSGAKLSPHRMSR 893          
BLAST of mRNA_M-pyrifera_M_contig91220.21141.1 vs. uniprot
Match: A0A7S1CL48_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CL48_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.950e-12
Identity = 36/85 (42.35%), Postives = 46/85 (54.12%), Query Frame = 1
Query:    1 KGAGITDSVPSWCDRILFHSLPSRQDDLLPES-------TDPSDPDAP--------HNYRAVNDGMDISDHSPVFCTWTLNALIN 210
            KG  I + VP W DRI +HS+ SR+ +L+PE            D  AP        HNY AVN  +D SDHSPV+CTW+L    +
Sbjct:  529 KGGRIVERVPGWTDRIQYHSIHSRRGELVPELLAEDGGVASTRDDGAPGSAADGQAHNYHAVNTVLDGSDHSPVYCTWSLEIAAD 613          
BLAST of mRNA_M-pyrifera_M_contig91220.21141.1 vs. uniprot
Match: A0A662WK26_9STRA (IPPc domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WK26_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 6.840e-12
Identity = 38/77 (49.35%), Postives = 44/77 (57.14%), Query Frame = 1
Query:    1 KGAGITDSVPSWCDRILFHSLPSRQDDLLPEST-DPS--------DPDAPHNYRAVN--DGMDISDHSPVFCTWTLN 198
            KG  +   VP WCDRIL HSL      LLPE   DP+         P    NYR+VN  DGMD+SDHSPVF T+ L+
Sbjct:  728 KGGKVKKRVPGWCDRILVHSLLVSDSKLLPEKVRDPTAISGSEGQPPQLIDNYRSVNHGDGMDVSDHSPVFATFVLS 804          
BLAST of mRNA_M-pyrifera_M_contig91220.21141.1 vs. uniprot
Match: A0A3R7J8F7_9STRA (Cilia- and flagella-associated protein 300 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J8F7_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.750e-11
Identity = 36/73 (49.32%), Postives = 44/73 (60.27%), Query Frame = 1
Query:    1 KGAGITDSVPSWCDRILFHSLPSRQDDLLPEST-DPSDPDAP----HNYRAVN--DGMDISDHSPVFCTWTLN 198
            KG  +   VP WCDRIL HSL      L+PE   DP+  +       NYR+VN  DGMD+SDHSPVF T+ L+
Sbjct:  466 KGGKVKKRVPGWCDRILIHSLLVSDSKLIPEKVLDPTSKEQSPLLIDNYRSVNHGDGMDVSDHSPVFGTFVLS 538          
BLAST of mRNA_M-pyrifera_M_contig91220.21141.1 vs. uniprot
Match: A0A225VHL6_9STRA (IPPc domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VHL6_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.380e-11
Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 1
Query:    1 KGAGITDSVPSWCDRILFHSLPSRQDDLLPEST-DPSDPDAP----HNYRAVN--DGMDISDHSPVFCTWTLNALIN 210
            KG  +   VP WCDRIL HSL      L+PE   DP+  +       NYR+VN  DGMD+SDHSPV+ T+ L+   N
Sbjct:  729 KGGKVKKRVPGWCDRILIHSLLVSDSKLIPEKVPDPTSQEVSPRYIDNYRSVNHGDGMDVSDHSPVYGTFVLSFPQN 805          
BLAST of mRNA_M-pyrifera_M_contig91220.21141.1 vs. uniprot
Match: H3GSC4_PHYRM (Cilia- and flagella-associated protein 300 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSC4_PHYRM)

HSP 1 Score: 67.4 bits (163), Expect = 2.400e-11
Identity = 36/73 (49.32%), Postives = 44/73 (60.27%), Query Frame = 1
Query:    1 KGAGITDSVPSWCDRILFHSLPSRQDDLLPEST-DPSD----PDAPHNYRAVN--DGMDISDHSPVFCTWTLN 198
            KG  +   VP WCDRIL HSL      L+PE   DP+     P    NYR+VN  DGMD+SDHSPV+ T+ L+
Sbjct:  702 KGGKVKKRVPGWCDRILIHSLLVSDSKLIPEKVQDPTSKELSPRLIDNYRSVNHGDGMDVSDHSPVYGTFVLS 774          
BLAST of mRNA_M-pyrifera_M_contig91220.21141.1 vs. uniprot
Match: A0A1V9Z462_9STRA (IPPc domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z462_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.250e-11
Identity = 36/77 (46.75%), Postives = 44/77 (57.14%), Query Frame = 1
Query:    1 KGAGITDSVPSWCDRILFHSLPSRQDDLLPESTDPSDPDAP----HNYRAVNDGM--DISDHSPVFCTWTLNALINP 213
            KG  +   VP WCDRIL +S P R   L  E  +   P AP     NY+++NDGM  DISDHSPV CT+ L  +  P
Sbjct:  634 KGGQVKKRVPGWCDRILVYSTPIRNSYLAAEKVE--SPFAPGKLIDNYKSINDGMGMDISDHSPVSCTFLLKFVRPP 708          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91220.21141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CG25_CAFRO1.570e-2866.22IPPc domain-containing protein n=4 Tax=Cafeteria r... [more]
A0A813A7H8_9DINO1.010e-2261.33INPP5D protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
F0WVH2_9STRA2.200e-1348.10Uncharacterized protein AlNc14C296G10307 n=1 Tax=A... [more]
K3WZF9_GLOUD1.050e-1242.86IPPc domain-containing protein n=1 Tax=Globisporan... [more]
A0A7S1CL48_9STRA1.950e-1242.35Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A662WK26_9STRA6.840e-1249.35IPPc domain-containing protein n=2 Tax=Nothophytop... [more]
A0A3R7J8F7_9STRA1.750e-1149.32Cilia- and flagella-associated protein 300 n=4 Tax... [more]
A0A225VHL6_9STRA2.380e-1146.75IPPc domain-containing protein n=1 Tax=Phytophthor... [more]
H3GSC4_PHYRM2.400e-1149.32Cilia- and flagella-associated protein 300 n=1 Tax... [more]
A0A1V9Z462_9STRA3.250e-1146.75IPPc domain-containing protein n=1 Tax=Achlya hypo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91220contigM-pyrifera_M_contig91220:554..781 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score70.9
Seed ortholog evalue3e-10
Seed eggNOG ortholog653948.CCA25413
KEGG rclassRC00078
KEGG koko:K01099,ko:K14005
KEGG ReactionR04404,R09827
KEGG Pathwayko00562,ko01100,ko04070,ko04141,map00562,map01100,map04070,map04141
KEGG ModuleM00404
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatidylinositol dephosphorylation
EggNOG OGsCOG5411@1,KOG0565@2759
EC3.1.3.36
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Exons1
Model size228
Cds size228
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816824.546306-CDS-M-pyrifera_M_contig91220:553..7811622816824.546306-CDS-M-pyrifera_M_contig91220:553..781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91220 554..781 -
1692278200.1401412-CDS-M-pyrifera_M_contig91220:553..7811692278200.1401412-CDS-M-pyrifera_M_contig91220:553..781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91220 554..781 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91220.21141.1prot_M-pyrifera_M_contig91220.21141.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91220 554..781 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91220.21141.1

>prot_M-pyrifera_M_contig91220.21141.1 ID=prot_M-pyrifera_M_contig91220.21141.1|Name=mRNA_M-pyrifera_M_contig91220.21141.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp
KGAGITDSVPSWCDRILFHSLPSRQDDLLPESTDPSDPDAPHNYRAVNDG
MDISDHSPVFCTWTLNALINPHDKER
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mRNA from alignment at M-pyrifera_M_contig91220:554..781-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91220.21141.1 ID=mRNA_M-pyrifera_M_contig91220.21141.1|Name=mRNA_M-pyrifera_M_contig91220.21141.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=228bp|location=Sequence derived from alignment at M-pyrifera_M_contig91220:554..781- (Macrocystis pyrifera P11B4 male)
AAGGGTGCTGGAATTACTGATAGCGTCCCTTCGTGGTGTGATCGCATTCT CTTCCACTCCTTGCCATCGCGCCAAGACGACTTGCTCCCAGAGTCAACGG ATCCTTCAGACCCCGATGCGCCTCACAACTACCGCGCCGTGAATGATGGG ATGGACATTTCAGACCACTCTCCAGTGTTTTGCACGTGGACACTCAACGC CCTCATCAATCCACACGACAAAGAACGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91220:554..781-

>mRNA_M-pyrifera_M_contig91220.21141.1 ID=mRNA_M-pyrifera_M_contig91220.21141.1|Name=mRNA_M-pyrifera_M_contig91220.21141.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig91220:554..781- (Macrocystis pyrifera P11B4 male)
AAGGGTGCTGGAATTACTGATAGCGTCCCTTCGTGGTGTGATCGCATTCT
CTTCCACTCCTTGCCATCGCGCCAAGACGACTTGCTCCCAGAGTCAACGG
ATCCTTCAGACCCCGATGCGCCTCACAACTACCGCGCCGTGAATGATGGG
ATGGACATTTCAGACCACTCTCCAGTGTTTTGCACGTGGACACTCAACGC
CCTCATCAATCCACACGACAAAGAACGAAAGGGTGCTGGAATTACTGATA
GCGTCCCTTCGTGGTGTGATCGCATTCTCTTCCACTCCTTGCCATCGCGC
CAAGACGACTTGCTCCCAGAGTCAACGGATCCTTCAGACCCCGATGCGCC
TCACAACTACCGCGCCGTGAATGATGGGATGGACATTTCAGACCACTCTC
CAGTGTTTTGCACGTGGACACTCAACGCCCTCATCAATCCACACGACAAA
GAACGA
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