mRNA_M-pyrifera_M_contig91204.21137.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91204.21137.1
Unique NamemRNA_M-pyrifera_M_contig91204.21137.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91204.21137.1 vs. uniprot
Match: A0A518A2B5_9PLAN (Glycine dehydrogenase (aminomethyl-transferring) n=18 Tax=Planctomycetaceae TaxID=126 RepID=A0A518A2B5_9PLAN)

HSP 1 Score: 503 bits (1295), Expect = 2.970e-176
Identity = 246/260 (94.62%), Postives = 254/260 (97.69%), Query Frame = 1
Query:    1 TAVFMVTNPNTLGLFEKDIKQIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVIGHDTSAEEGEAYQLDTPPKSIGRVRSFCGNIGILVRGYCYLRTLGAAGLKAVSENAVLNANYLKALLKDVLPVPNGDLCMHEFVASASKSKAANGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAETIVKILQEDPEFLHQAPHSTDVS 780
            TAVFMVTNPNTLGLFEKDI+QIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVI HD +A EGEAYQL TPPKSIGRVRSF GNIGILVRGYCYLRTLGAAGLKAVSENAVLNANYLKALLKDVLPVPNGDLCMHEFVASAS+SKAANGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIM+EPTETESKETLDAFAETI +IL+EDPEFLHQAPHST++S
Sbjct:  211 TAVFMVTNPNTLGLFEKDIRQIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVISHDATAAEGEAYQLVTPPKSIGRVRSFYGNIGILVRGYCYLRTLGAAGLKAVSENAVLNANYLKALLKDVLPVPNGDLCMHEFVASASRSKAANGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMIEPTETESKETLDAFAETITRILKEDPEFLHQAPHSTEIS 470          
BLAST of mRNA_M-pyrifera_M_contig91204.21137.1 vs. uniprot
Match: A0A518I841_9PLAN (Glycine dehydrogenase (aminomethyl-transferring) n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A518I841_9PLAN)

HSP 1 Score: 473 bits (1218), Expect = 1.530e-164
Identity = 233/261 (89.27%), Postives = 246/261 (94.25%), Query Frame = 1
Query:    1 TAVFMVTNPNTLGLFEKDIKQIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVIGHDTSA-EEGEAYQLDTPPKSIGRVRSFCGNIGILVRGYCYLRTLGAAGLKAVSENAVLNANYLKALLKDVLPVPNGDLCMHEFVASASKSKAANGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAETIVKILQEDPEFLHQAPHSTDVS 780
            TAVFMVTNPNTLGLFEKDIKQIA MVH+VGGLVYIDGANMNAILGYTRPGDFGGDMMH+NVHKTFTGPHGAGGPGSGPIAVRDFL+DFLPGPVI  + +A E G+ Y L+ PPKSIGRVR+F GNIGI+VRGYCYLRTLGA GLKAVSENAVLNANYLKA+LKDVLPVPNGDLCMHEFVASASK KA NG+TAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAETI KILQEDPE+LHQAPHST +S
Sbjct:  211 TAVFMVTNPNTLGLFEKDIKQIADMVHEVGGLVYIDGANMNAILGYTRPGDFGGDMMHYNVHKTFTGPHGAGGPGSGPIAVRDFLSDFLPGPVIKRNENAGENGDQYTLENPPKSIGRVRTFYGNIGIVVRGYCYLRTLGAKGLKAVSENAVLNANYLKAILKDVLPVPNGDLCMHEFVASASKIKAENGVTAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAETIRKILQEDPEYLHQAPHSTAIS 471          
BLAST of mRNA_M-pyrifera_M_contig91204.21137.1 vs. uniprot
Match: A0A517W1D3_9PLAN (Probable glycine dehydrogenase (decarboxylating) subunit 2 n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W1D3_9PLAN)

HSP 1 Score: 463 bits (1192), Expect = 1.270e-160
Identity = 226/260 (86.92%), Postives = 240/260 (92.31%), Query Frame = 1
Query:    1 TAVFMVTNPNTLGLFEKDIKQIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVIGHDTSAEEGEAYQLDTPPKSIGRVRSFCGNIGILVRGYCYLRTLGAAGLKAVSENAVLNANYLKALLKDVLPVPNGDLCMHEFVASASKSKAANGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAETIVKILQEDPEFLHQAPHSTDVS 780
            TAVFMVTNPNTLGLFEKDIKQIAQMVHD GGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPG+GPIAVRDFLAD+LPGPVI    +  E   + L+ P KSIGR+R+F GNIGILVRGYCYLRTLGA GLKAVSENAVLNANYLK +LKDVLPVPNGDLCMHEFVASASK K+ NGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAE I +I++EDPEFLH+APHSTD+S
Sbjct:  211 TAVFMVTNPNTLGLFEKDIKQIAQMVHDAGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGAGPIAVRDFLADYLPGPVIKQTKTDSEENQFVLENPSKSIGRIRTFYGNIGILVRGYCYLRTLGAEGLKAVSENAVLNANYLKVILKDVLPVPNGDLCMHEFVASASKMKSKNGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAEIIRQIVKEDPEFLHEAPHSTDIS 470          
BLAST of mRNA_M-pyrifera_M_contig91204.21137.1 vs. uniprot
Match: UPI0014206B53 (aminomethyl-transferring glycine dehydrogenase subunit GcvPB n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI0014206B53)

HSP 1 Score: 418 bits (1074), Expect = 9.570e-143
Identity = 204/260 (78.46%), Postives = 230/260 (88.46%), Query Frame = 1
Query:    1 TAVFMVTNPNTLGLFEKDIKQIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVIGHDTSAEEGEAYQLDTPPKSIGRVRSFCGNIGILVRGYCYLRTLGAAGLKAVSENAVLNANYLKALLKDVLPVPNGDLCMHEFVASASKSKAANGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAETIVKILQEDPEFLHQAPHSTDVS 780
            TAVFM+TNPNTLGLFE+DIK+I++ +HDVGGLVYIDGANMNAILG TRPGDFGGDMMH+NVHKTFTGPHGAGGPG+GPIAVRDFL D+LPGP++   T +E+G  YQL  PPKSIGR+RSF GN+GIL+RGY YLRTLG  GL+AVSENAVLNANYLKALLKDVLPVP+G+ CMHEFVASA   K    ++AMDIAKRLLDFGFHAPTVYFPLVV EA+M+EPTETESKETLDAFA+TI  I+ EDPEFL  APHST V+
Sbjct:  211 TAVFMITNPNTLGLFERDIKEISKRLHDVGGLVYIDGANMNAILGITRPGDFGGDMMHYNVHKTFTGPHGAGGPGAGPIAVRDFLGDYLPGPIV---TQSEDG-TYQLTDPPKSIGRMRSFFGNVGILLRGYFYLRTLGPDGLRAVSENAVLNANYLKALLKDVLPVPHGEFCMHEFVASAKALKTDRNVSAMDIAKRLLDFGFHAPTVYFPLVVAEAMMMEPTETESKETLDAFADTIKTIVTEDPEFLRNAPHSTPVN 466          
BLAST of mRNA_M-pyrifera_M_contig91204.21137.1 vs. uniprot
Match: A0A517Z874_9PLAN (Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z874_9PLAN)

HSP 1 Score: 412 bits (1059), Expect = 2.120e-140
Identity = 197/260 (75.77%), Postives = 222/260 (85.38%), Query Frame = 1
Query:    1 TAVFMVTNPNTLGLFEKDIKQIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVIGHDTSAEEGEAYQLDTPPKSIGRVRSFCGNIGILVRGYCYLRTLGAAGLKAVSENAVLNANYLKALLKDVLPVPNGDLCMHEFVASASKSKAANGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAETIVKILQEDPEFLHQAPHSTDVS 780
            TAVFM+TNPNTLGLFE+DI +IA M+HD GGLVYIDGANMNAILG TRPGDFGGDMMH+NVHKTFTGPHGAGGPG+GPIAVR FL D+LPGPV+  DT+ +    Y+L  PP SIGR+RSF GN+GIL+RGY YLRTLGA GL+AVSENAVLNANYL+  LKD+LPVP G+ CMHEFV+S    K   G+TAMDIAKRLLD+GFHAPTVYFPLVV EA+M+EPTETESKETLDAF+E +  I  EDPE LHQAPHST VS
Sbjct:  211 TAVFMITNPNTLGLFERDIARIAGMIHDAGGLVYIDGANMNAILGITRPGDFGGDMMHYNVHKTFTGPHGAGGPGAGPIAVRSFLEDYLPGPVVRKDTAEDGSVTYRLADPPNSIGRMRSFFGNVGILLRGYFYLRTLGADGLRAVSENAVLNANYLREKLKDILPVPQGERCMHEFVSSGKLQKDERGVTAMDIAKRLLDYGFHAPTVYFPLVVAEALMIEPTETESKETLDAFSEALHAIASEDPEMLHQAPHSTPVS 470          
BLAST of mRNA_M-pyrifera_M_contig91204.21137.1 vs. uniprot
Match: A0A517QSB2_9PLAN (Glycine dehydrogenase (aminomethyl-transferring) n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QSB2_9PLAN)

HSP 1 Score: 412 bits (1058), Expect = 2.900e-140
Identity = 204/259 (78.76%), Postives = 228/259 (88.03%), Query Frame = 1
Query:    1 TAVFMVTNPNTLGLFEKDIKQIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVIGHDTSAEEGEA--YQLDTPPKSIGRVRSFCGNIGILVRGYCYLRTLGAAGLKAVSENAVLNANYLKALLKDVLPVPNGDLCMHEFVASASKSKAANGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAETIVKILQEDPEFLHQAPHST 771
            TAVFM+TNPNTLGLFEKDI +I+ ++HDVGGLVYIDGANMNAILG TRPGDFGGDMMH+NVHKTFTGPHGAGGPG+GPIAVRDFLADFLPGPV+   T +EE  A  Y+L TP +SIGR+RSF GN+GIL+RGY YLRTLGA GL+ VSE+AVLNANYLKA L DVLPVP G+ CMHEFVASA + K A+GITAMDIAKRLLDFGFHAPTVYFPLVV EA+M+EPTETESKETLDAF E I  I++ED  FLH+APHST
Sbjct:  211 TAVFMITNPNTLGLFEKDIAKISSILHDVGGLVYIDGANMNAILGITRPGDFGGDMMHYNVHKTFTGPHGAGGPGAGPIAVRDFLADFLPGPVV---TKSEEDGADIYRLTTPSRSIGRMRSFFGNVGILLRGYFYLRTLGAQGLRDVSEHAVLNANYLKARLSDVLPVPRGEFCMHEFVASARQLKDAHGITAMDIAKRLLDFGFHAPTVYFPLVVAEAMMIEPTETESKETLDAFVEAIQTIVKEDASFLHEAPHST 466          
BLAST of mRNA_M-pyrifera_M_contig91204.21137.1 vs. uniprot
Match: A0A3B1DIL2_9ZZZZ (Glycine dehydrogenase (aminomethyl-transferring) (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DIL2_9ZZZZ)

HSP 1 Score: 403 bits (1035), Expect = 6.380e-140
Identity = 198/258 (76.74%), Postives = 220/258 (85.27%), Query Frame = 1
Query:   10 FMVTNPNTLGLFEKDIKQIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVIGHDTSAEEGEA-YQLDTPPKSIGRVRSFCGNIGILVRGYCYLRTLGAAGLKAVSENAVLNANYLKALLKDVLPVPNGDLCMHEFVASASKSKAANGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAETIVKILQEDPEFLHQAPHSTDVS 780
            FM+TNPNTLGLFE  I  IA M+HDVGGLVYIDGANMNAILG  RPGDFGGDMMH+NVHKTFTGPHGAGGPG+GPIAVRDFLAD+LPGPVI    + E   + YQL TP KSIGRVRSF GN+GIL+RGY YL+TLGAAG+K VSE AVLNANYLK +L+DVLPVP+G+ CMHEFVASA   K   GI+AMDIAKRLLDFGFHAPTVYFPL VPEA+M+EPTETES+ TLD FAETI  I+ EDPEFL +APHST +S
Sbjct:    1 FMITNPNTLGLFEPQIATIASMIHDVGGLVYIDGANMNAILGLARPGDFGGDMMHYNVHKTFTGPHGAGGPGAGPIAVRDFLADYLPGPVITKKNNEEANSSVYQLTTPKKSIGRVRSFFGNVGILLRGYFYLKTLGAAGVKEVSEQAVLNANYLKKMLEDVLPVPHGEKCMHEFVASAESVKQERGISAMDIAKRLLDFGFHAPTVYFPLDVPEAMMMEPTETESQATLDIFAETIRTIIAEDPEFLKEAPHSTPIS 258          
BLAST of mRNA_M-pyrifera_M_contig91204.21137.1 vs. uniprot
Match: A0A142X586_9PLAN (Glycine dehydrogenase (aminomethyl-transferring) n=1 Tax=Planctomyces sp. SH-PL14 TaxID=1632864 RepID=A0A142X586_9PLAN)

HSP 1 Score: 410 bits (1055), Expect = 8.830e-140
Identity = 202/260 (77.69%), Postives = 226/260 (86.92%), Query Frame = 1
Query:    1 TAVFMVTNPNTLGLFEKDIKQIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVIGHDTSAEEGEA-YQLDTPPKSIGRVRSFCGNIGILVRGYCYLRTLGAAGLKAVSENAVLNANYLKALLKDVLPVPNGDLCMHEFVASASKSKAANGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAETIVKILQEDPEFLHQAPHSTDV 777
            TAVFMVTNPNTLG+FEKDI QI++M+HDVGGLVYIDGANMNAI+G TRPGDFGGDMMH+NVHKTFTGPHGAGGPGSGPIAVR FLAD+LPGPVI   T+A  GEA Y+L TPPKSIGRVRSF GN+GIL+RGY YLRTLG  G + ++E AVLNANYLKA LKDVLPVP+G  CMHEFVASA   K   GITAM+IAKRLLD+GFHAPTVYFPLVVPEA+M+EPTETESK TLDAF E + KI++EDP  L QAPH+T +
Sbjct:  211 TAVFMVTNPNTLGIFEKDIAQISKMLHDVGGLVYIDGANMNAIVGVTRPGDFGGDMMHYNVHKTFTGPHGAGGPGSGPIAVRPFLADYLPGPVI-EKTAAAGGEATYRLKTPPKSIGRVRSFFGNVGILLRGYFYLRTLGPQGAREMTEQAVLNANYLKARLKDVLPVPHGGFCMHEFVASAKSLKDGRGITAMEIAKRLLDYGFHAPTVYFPLVVPEALMIEPTETESKATLDAFVEAVRKIVEEDPAMLKQAPHTTGI 469          
BLAST of mRNA_M-pyrifera_M_contig91204.21137.1 vs. uniprot
Match: A0A1I3J7T8_9PLAN (Glycine dehydrogenase (aminomethyl-transferring) n=1 Tax=Planctomicrobium piriforme TaxID=1576369 RepID=A0A1I3J7T8_9PLAN)

HSP 1 Score: 409 bits (1052), Expect = 2.140e-139
Identity = 198/259 (76.45%), Postives = 227/259 (87.64%), Query Frame = 1
Query:    1 TAVFMVTNPNTLGLFEKDIKQIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVIGHDTSAEEGEAYQLDTPPKSIGRVRSFCGNIGILVRGYCYLRTLGAAGLKAVSENAVLNANYLKALLKDVLPVPNGDLCMHEFVASASKSKAANGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAETIVKILQEDPEFLHQAPHSTDV 777
            TAVFMVTNPNTLGLFEKDI +I++++HDVGGLVYIDGANMNAILG TRPGDFGGDMMH+NVHKTFTGPHGAGGPGSGPIAVR FLAD+LPGP++   T  ++G  Y+L TP KS+GRVRSF GN+GIL+RGY YLRTLG  GL+ VSE+A+LNANYL+A LKDVLPVPNG+ CMHEFVASA K K   GITA+DI KRLLD+GFHAPTVYFPLVVPEA+M+EPTETESKETLDAF E I  I++ED + LHQ+PH+T V
Sbjct:  211 TAVFMVTNPNTLGLFEKDIAEISKILHDVGGLVYIDGANMNAILGITRPGDFGGDMMHYNVHKTFTGPHGAGGPGSGPIAVRSFLADYLPGPIV---TKTQQG-TYELTTPAKSVGRVRSFFGNVGILLRGYFYLRTLGGQGLREVSEHALLNANYLRAKLKDVLPVPNGEYCMHEFVASAKKLKDETGITALDICKRLLDYGFHAPTVYFPLVVPEALMIEPTETESKETLDAFVEAIRAIVKEDGDMLHQSPHTTPV 465          
BLAST of mRNA_M-pyrifera_M_contig91204.21137.1 vs. uniprot
Match: A0A4P5XRQ6_9BACT (Glycine dehydrogenase (aminomethyl-transferring) n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A4P5XRQ6_9BACT)

HSP 1 Score: 409 bits (1052), Expect = 2.210e-139
Identity = 197/260 (75.77%), Postives = 226/260 (86.92%), Query Frame = 1
Query:    1 TAVFMVTNPNTLGLFEKDIKQIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGGDMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVIGHDTSAEEGEAYQLDTPPKSIGRVRSFCGNIGILVRGYCYLRTLGAAGLKAVSENAVLNANYLKALLKDVLPVPNGDLCMHEFVASASKSKAANGITAMDIAKRLLDFGFHAPTVYFPLVVPEAIMVEPTETESKETLDAFAETIVKILQEDPEFLHQAPHSTDVS 780
            TAVFM+TNPNTLGLFE+DI +I+ ++HDVGGLVYIDGANMNAILG TRPGDFGGDMMH+NVHKTFTGPHG+GGPG+GPIAVRDFLAD+LPGP++   T     + +QL TPPKSIGRVRS  GN+GIL+RGY YLRTLGA GLKA SE AVLNANYL+A L DVLPVP+G+ CMHEFVASA KSK   GITA+DIAKRLLD+G++APTVYFP +VPEA+MVEPTETES++TLDAFA+TI  IL E PEFLH APH T +S
Sbjct:  211 TAVFMITNPNTLGLFERDIAKISHLLHDVGGLVYIDGANMNAILGITRPGDFGGDMMHYNVHKTFTGPHGSGGPGAGPIAVRDFLADYLPGPIVTR-TQFGGADRFQLTTPPKSIGRVRSQFGNVGILLRGYLYLRTLGAEGLKAASEQAVLNANYLRAKLADVLPVPHGERCMHEFVASAEKSKTEKGITALDIAKRLLDYGYYAPTVYFPQIVPEALMVEPTETESQQTLDAFADTIRTILSESPEFLHNAPHETPIS 469          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91204.21137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518A2B5_9PLAN2.970e-17694.62Glycine dehydrogenase (aminomethyl-transferring) n... [more]
A0A518I841_9PLAN1.530e-16489.27Glycine dehydrogenase (aminomethyl-transferring) n... [more]
A0A517W1D3_9PLAN1.270e-16086.92Probable glycine dehydrogenase (decarboxylating) s... [more]
UPI0014206B539.570e-14378.46aminomethyl-transferring glycine dehydrogenase sub... [more]
A0A517Z874_9PLAN2.120e-14075.77Probable glycine dehydrogenase (decarboxylating) s... [more]
A0A517QSB2_9PLAN2.900e-14078.76Glycine dehydrogenase (aminomethyl-transferring) n... [more]
A0A3B1DIL2_9ZZZZ6.380e-14076.74Glycine dehydrogenase (aminomethyl-transferring) (... [more]
A0A142X586_9PLAN8.830e-14077.69Glycine dehydrogenase (aminomethyl-transferring) n... [more]
A0A1I3J7T8_9PLAN2.140e-13976.45Glycine dehydrogenase (aminomethyl-transferring) n... [more]
A0A4P5XRQ6_9BACT2.210e-13975.77Glycine dehydrogenase (aminomethyl-transferring) n... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91204contigM-pyrifera_M_contig91204:2..781 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score481.1
Seed ortholog evalue3.2e-133
Seed eggNOG ortholog344747.PM8797T_17934
Preferred namegcvPB
KEGG rclassRC00022,RC00929,RC02834,RC02880
KEGG koko:K00283
KEGG ReactionR01221,R03425
KEGG Pathwayko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019464,GO:0019752,GO:0032991,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902494,GO:1990204
EggNOG free text desc.The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EggNOG OGs2IYB9@203682,COG1003@1,COG1003@2
EC1.4.4.2
COG Functional cat.E
BiGG ReactioniHN637.CLJU_RS11880
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size780
Cds size768
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816824.3869505-CDS-M-pyrifera_M_contig91204:1..7691622816824.3869505-CDS-M-pyrifera_M_contig91204:1..769Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91204 2..769 -
1692278200.035339-CDS-M-pyrifera_M_contig91204:1..7691692278200.035339-CDS-M-pyrifera_M_contig91204:1..769Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91204 2..769 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816824.4042215-UTR-M-pyrifera_M_contig91204:769..7811622816824.4042215-UTR-M-pyrifera_M_contig91204:769..781Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig91204 770..781 -
1692278200.0558794-UTR-M-pyrifera_M_contig91204:769..7811692278200.0558794-UTR-M-pyrifera_M_contig91204:769..781Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig91204 770..781 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91204.21137.1prot_M-pyrifera_M_contig91204.21137.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91204 2..769 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91204.21137.1

>prot_M-pyrifera_M_contig91204.21137.1 ID=prot_M-pyrifera_M_contig91204.21137.1|Name=mRNA_M-pyrifera_M_contig91204.21137.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp
MVTNPNTLGLFEKDIKQIAQMVHDVGGLVYIDGANMNAILGYTRPGDFGG
DMMHFNVHKTFTGPHGAGGPGSGPIAVRDFLADFLPGPVIGHDTSAEEGE
AYQLDTPPKSIGRVRSFCGNIGILVRGYCYLRTLGAAGLKAVSENAVLNA
NYLKALLKDVLPVPNGDLCMHEFVASASKSKAANGITAMDIAKRLLDFGF
HAPTVYFPLVVPEAIMVEPTETESKETLDAFAETIVKILQEDPEFLHQAP
HSTDVS
back to top

mRNA from alignment at M-pyrifera_M_contig91204:2..781-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91204.21137.1 ID=mRNA_M-pyrifera_M_contig91204.21137.1|Name=mRNA_M-pyrifera_M_contig91204.21137.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig91204:2..781- (Macrocystis pyrifera P11B4 male)
ACCGCTGTTTTCATGGTCACCAACCCCAACACACTGGGACTGTTCGAGAA AGACATTAAACAGATCGCTCAGATGGTTCACGACGTAGGTGGCCTGGTCT ACATTGATGGTGCCAACATGAACGCGATCCTGGGCTATACCCGTCCGGGA GACTTCGGCGGCGACATGATGCATTTCAATGTGCATAAAACCTTCACTGG TCCTCACGGAGCAGGTGGACCGGGTTCCGGCCCGATCGCCGTTCGTGATT TCCTGGCTGACTTCCTGCCCGGCCCCGTCATCGGCCATGACACTTCCGCG GAGGAAGGGGAAGCATACCAGCTTGATACACCACCCAAATCAATCGGTCG TGTCCGCTCCTTCTGCGGCAACATCGGCATTCTGGTACGGGGCTACTGCT ATCTGCGCACACTGGGTGCAGCAGGGTTAAAAGCGGTTTCTGAAAATGCG GTCTTGAATGCGAACTACCTCAAGGCCCTGCTCAAAGACGTGCTGCCTGT TCCCAATGGGGATCTGTGTATGCATGAGTTCGTGGCCTCTGCATCGAAGA GCAAAGCAGCCAACGGTATCACAGCCATGGATATCGCCAAGCGGCTGCTC GATTTTGGATTCCATGCCCCCACAGTCTACTTCCCGCTGGTAGTGCCCGA AGCCATCATGGTTGAGCCGACCGAAACGGAATCCAAAGAAACTCTGGATG CCTTTGCTGAGACGATTGTTAAAATCCTCCAGGAAGATCCCGAGTTCCTG CATCAGGCTCCGCACTCTACAGACGTCAGT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig91204:2..781-

>mRNA_M-pyrifera_M_contig91204.21137.1 ID=mRNA_M-pyrifera_M_contig91204.21137.1|Name=mRNA_M-pyrifera_M_contig91204.21137.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig91204:2..781- (Macrocystis pyrifera P11B4 male)
ATGGTCACCAACCCCAACACACTGGGACTGTTCGAGAAAGACATTAAACA
GATCGCTCAGATGGTTCACGACGTAGGTGGCCTGGTCTACATTGATGGTG
CCAACATGAACGCGATCCTGGGCTATACCCGTCCGGGAGACTTCGGCGGC
GACATGATGCATTTCAATGTGCATAAAACCTTCACTGGTCCTCACGGAGC
AGGTGGACCGGGTTCCGGCCCGATCGCCGTTCGTGATTTCCTGGCTGACT
TCCTGCCCGGCCCCGTCATCGGCCATGACACTTCCGCGGAGGAAGGGGAA
GCATACCAGCTTGATACACCACCCAAATCAATCGGTCGTGTCCGCTCCTT
CTGCGGCAACATCGGCATTCTGGTACGGGGCTACTGCTATCTGCGCACAC
TGGGTGCAGCAGGGTTAAAAGCGGTTTCTGAAAATGCGGTCTTGAATGCG
AACTACCTCAAGGCCCTGCTCAAAGACGTGCTGCCTGTTCCCAATGGGGA
TCTGTGTATGCATGAGTTCGTGGCCTCTGCATCGAAGAGCAAAGCAGCCA
ACGGTATCACAGCCATGGATATCGCCAAGCGGCTGCTCGATTTTGGATTC
CATGCCCCCACAGTCTACTTCCCGCTGGTAGTGCCCGAAGCCATCATGGT
TGAGCCGACCGAAACGGAATCCAAAGAAACTCTGGATGCCTTTGCTGAGA
CGATTGTTAAAATCCTCCAGGAAGATCCCGAGTTCCTGCATCAGGCTCCG
CACTCTACAGACGTCAGTATGGTCACCAACCCCAACACACTGGGACTGTT
CGAGAAAGACATTAAACAGATCGCTCAGATGGTTCACGACGTAGGTGGCC
TGGTCTACATTGATGGTGCCAACATGAACGCGATCCTGGGCTATACCCGT
CCGGGAGACTTCGGCGGCGACATGATGCATTTCAATGTGCATAAAACCTT
CACTGGTCCTCACGGAGCAGGTGGACCGGGTTCCGGCCCGATCGCCGTTC
GTGATTTCCTGGCTGACTTCCTGCCCGGCCCCGTCATCGGCCATGACACT
TCCGCGGAGGAAGGGGAAGCATACCAGCTTGATACACCACCCAAATCAAT
CGGTCGTGTCCGCTCCTTCTGCGGCAACATCGGCATTCTGGTACGGGGCT
ACTGCTATCTGCGCACACTGGGTGCAGCAGGGTTAAAAGCGGTTTCTGAA
AATGCGGTCTTGAATGCGAACTACCTCAAGGCCCTGCTCAAAGACGTGCT
GCCTGTTCCCAATGGGGATCTGTGTATGCATGAGTTCGTGGCCTCTGCAT
CGAAGAGCAAAGCAGCCAACGGTATCACAGCCATGGATATCGCCAAGCGG
CTGCTCGATTTTGGATTCCATGCCCCCACAGTCTACTTCCCGCTGGTAGT
GCCCGAAGCCATCATGGTTGAGCCGACCGAAACGGAATCCAAAGAAACTC
TGGATGCCTTTGCTGAGACGATTGTTAAAATCCTCCAGGAAGATCCCGAG
TTCCTGCATCAGGCTCCGCACTCTACAGACGTCAGT
back to top