mRNA_M-pyrifera_M_contig9120.21136.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9120.21136.1
Unique NamemRNA_M-pyrifera_M_contig9120.21136.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig9120.21136.1 vs. uniprot
Match: D7FSU0_ECTSI (Aurora kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU0_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 3.740e-72
Identity = 125/206 (60.68%), Postives = 157/206 (76.21%), Query Frame = 1 
Query:    1 LSELDHPSVVKLIEVFNSDTHVFMAMEAVDGRELYDEINRKGKLEERRASDLFLQLENLLLSRDGTRMKVTDFGLAARLDEWEGDPKHQRRRSWGAKRKQQGRQQTACGTPSYAAPEIITSSETQGYDARGVDIWCAGVVLYAMVTGKMPFRGEDVNATLDIIRAKEPEYPEQLSPEITHLLRSMLQKDPSKRMSVAGVLAHPWTT 618
            + ELDHP VVKL+EVFNS+THVFMAMEA++GREL  E+ R+G L E R+ ++F QLEN+LLS DG R+K+TDF LA  LDEWEG    + R+SW A RK   RQQ+A  TP+YAAPE+I ++E   YDARGVD WCAG+ L+A+VTG++PFR +   ATL II+  EP YPE L P +T LLR ML+KDPSKR+SV  V+ HPWT+
Sbjct:   71 MKELDHPCVVKLVEVFNSETHVFMAMEAIEGRELRTELRREGYLSEERSRNIFQQLENVLLSEDGERIKLTDFELATHLDEWEGGSFQEGRKSWRA-RKSHRRQQSAGRTPAYAAPEVIAATEDHRYDARGVDTWCAGLCLFALVTGRLPFRAKGSEATLGIIQTMEPTYPEGLPPLLTDLLRGMLRKDPSKRLSVPAVMGHPWTS 275
[Close]
BLAST of mRNA_M-pyrifera_M_contig9120.21136.1 vs. uniprot
Match: A0A6H5KYT3_9PHAE (Aurora kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYT3_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 4.160e-64
Identity = 120/225 (53.33%), Postives = 151/225 (67.11%), Query Frame = 1 
Query:    1 LSELDHPSVVKLIEVFNSDTHVFMAMEAVDGRELYDEINRKGKLEERRASDLFLQL-------------------ENLLLSRDGTRMKVTDFGLAARLDEWEGDPKHQRRRSWGAKRKQQGRQQTACGTPSYAAPEIITSSETQGYDARGVDIWCAGVVLYAMVTGKMPFRGEDVNATLDIIRAKEPEYPEQLSPEITHLLRSMLQKDPSKRMSVAGVLAHPWTT 618
            + ELDHP VVKL+EVFNS+THVFMAME ++GREL  E+ R+G L E R+ ++F QL                   EN+LLS DG R+K+TDF LA  LDEWEG      R+SW  K K   RQQ+   T +YAAPE+I ++E   YDARGVD WCAG+ L+A+VTG++PFR +   ATL II+  EP YPE L P +T LLR ML+KD SKR+SV  V+ HPWT+
Sbjct:   41 MKELDHPCVVKLVEVFNSETHVFMAMETIEGRELRTELRREGYLSEERSRNIFQQLMTAVRYLHSIGVAHRNIKLENVLLSEDGERIKLTDFELATHLDEWEGGSFQDGRKSWRTK-KSHRRQQSTGRTAAYAAPEVIAATEDHRYDARGVDTWCAGLCLFALVTGRLPFRAKGSEATLGIIQTMEPTYPEGLPPLLTDLLRGMLRKDSSKRLSVPAVIGHPWTS 264
[Close]
BLAST of mRNA_M-pyrifera_M_contig9120.21136.1 vs. uniprot
Match: A0A836CAF3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF3_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.030e-36
Identity = 87/223 (39.01%), Postives = 115/223 (51.57%), Query Frame = 1 
Query:    1 LSELDHPSVVKLIEVFNSDTHVFMAMEAVDGRELYDEINRKGKLEERRASDLFLQL-------------------ENLLLSRDGTRMKVTDFGLAARLDEWEGDPKHQRRRSWGAKRKQQGRQQTACGTPSYAAPEIITSSETQGYDARGVDIWCAGVVLYAMVTGKMPFRGEDVNATLDIIRAKEPEYPEQLSPEITHLLRSMLQKDPSKRMSVAGVLAHPW 612
            +S L H +VV+L EV NS T V+M ME V G ELYDEI  +  L E RA   F Q+                   EN+L+S DG  +K+TDFGL+A          H+R+RS              CGTP Y APE+      + YDAR  D+W AG+VL+ M+ G++PF G      LD+I  +E   P   S E   L+  ML K+ + R+S+ GV  HPW
Sbjct:   90 MSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVSSDGV-IKITDFGLSAMCGRGNS---HRRQRS-------------VCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPW 295
[Close]
BLAST of mRNA_M-pyrifera_M_contig9120.21136.1 vs. uniprot
Match: A0A836C9F6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F6_9STRA)

HSP 1 Score: 140 bits (352), Expect = 3.980e-34
Identity = 89/236 (37.71%), Postives = 126/236 (53.39%), Query Frame = 1 
Query:    1 LSELDHPSVVKLIEVFNSDTHVFMAMEAVDGRELYDEINRKGKLEERRASDLFLQL------------------------------ENLLLSRDGTRMKVTDFGLAARLDEWEGDPKHQRRRSWGAKRKQQGRQQTACGTPSYAAPEIITSSETQGYDARGVDIWCAGVVLYAMVTGKMPFRGEDVNATLDIIRAKEPEYPEQLSPEITHLLRSMLQKDPSKRMSVAGVLAHPWTT 618
            +S L HP+VV+L EV NS T+V+M +E V GRELY+EI   G L E RA   F Q+                              EN+L+SRDG ++K+TDFG++A      G   H+R             Q T CGTP Y APE+  S+++  YDAR  D+W AGVVL+ M+ G++PF G      L +I A+    P + SP    L++ ML+KD + R++++ V  HP+ T
Sbjct:   74 MSTLKHPNVVELKEVMNSSTNVYMVLEWVRGRELYEEIVVAGLLPEPRARAYFRQIVDGVAYLHSXXXXXXXXXXXXGIAHRDLKPENVLISRDG-QVKITDFGMSATCGSGRG---HRR-------------QHTVCGTPYYTAPEVFASTDSS-YDARRADVWSAGVVLFTMLEGRLPFEGASPEDALALIAAQPLAVPARFSPAARDLVQRMLRKDAAARITLSAVARHPFLT 291
[Close]
BLAST of mRNA_M-pyrifera_M_contig9120.21136.1 vs. uniprot
Match: A0A7J7INK0_9RHOD (Serine/threonine-protein kinase brsk1 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INK0_9RHOD)

HSP 1 Score: 135 bits (339), Expect = 5.320e-34
Identity = 77/219 (35.16%), Postives = 117/219 (53.42%), Query Frame = 1 
Query:   13 DHPSVVKLIEVFNSDTHVFMAMEAVDGRELYDEINRKGKLEERRASDLFLQL-------------------ENLLLSRDGTRMKVTDFGLAARLDEWEGDPKHQRRRSWGAKRKQQGRQQTACGTPSYAAPEIITSSETQGYDARGVDIWCAGVVLYAMVTGKMPFRGEDVNATLDIIRAKEPEYPEQLSPEITHLLRSMLQKDPSKRMSVAGVLAHPW 612
            DHP V++L+EVF ++TH+F+  E  DG EL+D + ++G LE   A   F Q+                   ENLLL ++  R+K+ DFG+A+ L                         +T+CG+P YAAPEII+     G+++   D+W  GV+LYA+VTGK+PF  +++   L  +R      P  L P++  L+  ML  DP +R++V G+ AHPW
Sbjct:   39 DHPHVLRLLEVFETNTHLFLVTEYADGGELFDYLVKRGSLEPDEARHFFRQIIEGVDYCHQRYIVHRDLKPENLLLDKEH-RIKIADFGMASMLPPG-------------------SMLETSCGSPHYAAPEIISGEMYSGFES---DVWSCGVILYALVTGKLPFDDDNLQRLLQKVRCGLYHLPSYLPPQLRSLIHCMLTVDPKRRITVDGIKAHPW 234
[Close]
BLAST of mRNA_M-pyrifera_M_contig9120.21136.1 vs. uniprot
Match: UPI0004407C66 (Pkinase-domain-containing protein n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004407C66)

HSP 1 Score: 133 bits (334), Expect = 3.930e-33
Identity = 79/230 (34.35%), Postives = 126/230 (54.78%), Query Frame = 1 
Query:   10 LDHPSVVKLIEVFNSDTHVFMAMEAVDGRELYDEINRKGKLEERRASDLFLQL-------------------ENLLLSRDGTRMKVTDFGLAARLDEWE-GDPKHQRRRSWGAKRKQQGRQQTACGTPSYAAPEIITSSETQGYDARGVDIWCAGVVLYAMVTGKMPFRGEDVNATLDIIRAKEPEYPEQLSPEITHLLRSMLQKDPSKRMSVAGVLAHPWTTLPPKHIS 639
            +DHP++++L +V+ +   +++ +E V+G EL+D I  +G+L E  A D F QL                   EN+LL +D   +KV DFG+AA    W+ GD                   +T+CG+P YA+PE+I+S   Q YD    D+W  GV+LYA++ GK+PF  EDV A L  +   + + P  + P    +L+ ML+KD +KR+ ++ ++ HPW T  P+ +S
Sbjct:   72 VDHPNIMRLYDVWETSGELYLILEYVEGGELFDYIIERGRLSEAEALDYFQQLINAMDYCHRLNIAHRDLKPENILLDKDKI-LKVADFGMAA----WQCGD----------------SLLKTSCGSPHYASPEVISS---QPYDGAISDVWSCGVILYALLAGKLPFDDEDVCALLQKVSCGKFDMPTDIDPLAQDMLKRMLEKDVNKRIKISEIVKHPWFTSKPQRVS 277
[Close]
BLAST of mRNA_M-pyrifera_M_contig9120.21136.1 vs. uniprot
Match: A0A7V5M3N4_9BACT (Non-specific serine/threonine protein kinase n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5M3N4_9BACT)

HSP 1 Score: 135 bits (339), Expect = 4.130e-32
Identity = 77/219 (35.16%), Postives = 118/219 (53.88%), Query Frame = 1 
Query:   13 DHPSVVKLIEVFNSDTHVFMAMEAVDGRELYDEINRKGKLEERRASDLFLQL-------------------ENLLLSRDGTRMKVTDFGLAARLDEWEGDPKHQRRRSWGAKRKQQGRQQTACGTPSYAAPEIITSSETQGYDARGVDIWCAGVVLYAMVTGKMPFRGEDVNATLDIIRAKEPEYPEQLSPEITHLLRSMLQKDPSKRMSVAGVLAHPW 612
            DHP+V++L+EVF ++TH+F+  E  DG EL+D + ++G LE   A   F Q+                   ENLLL ++  R+K+ DFG+A+ L                         +T+CG+P YAAPEII+     G+++   D+W  GV+LYA+VTGK+PF  +++   L  +R      P  L P++  L+  ML  DP +R++V G+ AHPW
Sbjct:  161 DHPNVLRLLEVFETNTHLFLVTEYADGGELFDYLVKRGSLEPDEARLFFRQIIEGVDYCHQRYIVHRDLKPENLLLDKEH-RIKIADFGMASMLPPG-------------------SMLETSCGSPHYAAPEIISGEMYSGFES---DVWSCGVILYALVTGKLPFDDDNLQRLLQKVRCGLYHLPSYLPPQLRSLIHCMLTVDPKRRITVEGIKAHPW 356
[Close]
BLAST of mRNA_M-pyrifera_M_contig9120.21136.1 vs. uniprot
Match: UPI0007F04561 (CBL-interacting serine/threonine-protein kinase 9-like isoform X1 n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F04561)

HSP 1 Score: 131 bits (330), Expect = 9.730e-32
Identity = 78/220 (35.45%), Postives = 119/220 (54.09%), Query Frame = 1 
Query:   10 LDHPSVVKLIEVFNSDTHVFMAMEAVDGRELYDEINRKGKLEERRASDLFLQL-------------------ENLLLSRDGTRMKVTDFGLAARLDEWEGDPKHQRRRSWGAKRKQQGRQQTACGTPSYAAPEIITSSETQGYDARGVDIWCAGVVLYAMVTGKMPFRGEDVNATLDIIRAKEPEYPEQLSPEITHLLRSMLQKDPSKRMSVAGVLAHPW 612
            ++HP+V+ L+EV  S T +F+ +E VDG EL+D+I ++G+L E  A   F QL                   ENLLL   GT +KV+DFGL+A   +   D                G   TACGTP+Y APE++T    +GYD    D+W  GV+L+ ++ G +PF   ++ A   +I+  +   P   SPE T L++ +L+ +PSKR++V  +L + W
Sbjct:   75 IEHPNVINLVEVMASKTKIFLVLEYVDGGELFDKIAQQGRLSEDEARGYFQQLVNAVDYCHSRGVYHRDLKPENLLLDSSGT-LKVSDFGLSALSQQQRED----------------GLLHTACGTPNYVAPEVLTD---RGYDGTTADVWSCGVILFVLMAGYLPFDEPNLPALYRMIQNADFTCPPWFSPEATKLIKHILEPNPSKRITVPKILKNTW 274
[Close]
BLAST of mRNA_M-pyrifera_M_contig9120.21136.1 vs. uniprot
Match: A0A0C3SBH3_PHLGI (Protein kinase domain-containing protein (Fragment) n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3SBH3_PHLGI)

HSP 1 Score: 129 bits (324), Expect = 1.100e-31
Identity = 77/227 (33.92%), Postives = 122/227 (53.74%), Query Frame = 1 
Query:   10 LDHPSVVKLIEVFNSDTHVFMAMEAVDGRELYDEINRKGKLEERRASDLFLQL-------------------ENLLLSRDGTRMKVTDFGLAARLDEWEGDPKHQRRRSWGAKRKQQGRQQTACGTPSYAAPEIITSSETQGYDARGVDIWCAGVVLYAMVTGKMPFRGEDVNATLDIIRAKEPEYPEQLSPEITHLLRSMLQKDPSKRMSVAGVLAHPW-TTLPPK 630
            +DHP++++L +V+ + T +++ +E ++G EL+D +  +GKL    A   F Q+                   ENLLL +D   +KV DFG+AA    W+G                    QTACG+P YAAPE++     + Y+    DIW  G+VLYA++ GK+PF  +D+   LD ++  +   P  L P    L+  ML+K+P KR++V+ VL HP+  ++PPK
Sbjct:   71 IDHPNIMRLYDVWETSTELYLILEYIEGGELFDYLCNRGKLSTSEALGYFQQIMVAVDYCHHFNIAHRDLKPENLLLDKDNN-IKVADFGMAA----WQGKT---------------NLLQTACGSPHYAAPEVVMG---RAYNGACSDIWSCGIVLYALLAGKLPFDDDDMGVLLDKVKIGKFMMPTHLDPSAKDLISKMLEKNPIKRITVSEVLKHPFFLSVPPK 274
[Close]
BLAST of mRNA_M-pyrifera_M_contig9120.21136.1 vs. uniprot
Match: A0A0D7A534_9AGAR (Pkinase-domain-containing protein (Fragment) n=1 Tax=Fistulina hepatica ATCC 64428 TaxID=1128425 RepID=A0A0D7A534_9AGAR)

HSP 1 Score: 127 bits (319), Expect = 5.640e-31
Identity = 77/228 (33.77%), Postives = 120/228 (52.63%), Query Frame = 1 
Query:   10 LDHPSVVKLIEVFNSDTHVFMAMEAVDGRELYDEINRKGKLEERRASDLFLQL-------------------ENLLLSRDGTRMKVTDFGLAARLDEWEGDPKHQRRRSWGAKRKQQGRQQTACGTPSYAAPEIITSSETQGYDARGVDIWCAGVVLYAMVTGKMPFRGEDVNATLDIIRAKEPEYPEQLSPEITHLLRSMLQKDPSKRMSVAGVLAHPW-TTLPPKH 633
            LDHP++++  +V+ + T +++ +E V G EL+D I +KG+LE   A D F Q+                   EN+LL  D   +K+ DFG+A    +   D  H                 T+CG+P YAAPEII +     YD    D+W  GV+L+AMV G++PF  +D+   L+ ++  + E P+ + P +  LL  ML KD  KR+++  +  HP+ T+ PPKH
Sbjct:   76 LDHPNILRFYDVWETSTDIYLIIEYVRGGELFDYICQKGRLETEEALDYFQQIIGALEYCHAYSIAHRDLKPENILLDED-LNVKIADFGMATLQRD---DLLH-----------------TSCGSPHYAAPEIIRND---AYDGAAADVWSCGVILHAMVAGRLPFDDDDLETLLNKVKDGDFEMPDDIEPLVQDLLAKMLVKDFKKRITLTAIKKHPFFTSRPPKH 279
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9120.21136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSU0_ECTSI3.740e-7260.68Aurora kinase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5KYT3_9PHAE4.160e-6453.33Aurora kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A836CAF3_9STRA1.030e-3639.01Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A836C9F6_9STRA3.980e-3437.71Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7J7INK0_9RHOD5.320e-3435.16Serine/threonine-protein kinase brsk1 n=1 Tax=Cyan... [more]
UPI0004407C663.930e-3334.35Pkinase-domain-containing protein n=1 Tax=Fomitipo... [more]
A0A7V5M3N4_9BACT4.130e-3235.16Non-specific serine/threonine protein kinase n=2 T... [more]
UPI0007F045619.730e-3235.45CBL-interacting serine/threonine-protein kinase 9-... [more]
A0A0C3SBH3_PHLGI1.100e-3133.92Protein kinase domain-containing protein (Fragment... [more]
A0A0D7A534_9AGAR5.640e-3133.77Pkinase-domain-containing protein (Fragment) n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9120contigM-pyrifera_M_contig9120:6846..11332 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score254.6
Seed ortholog evalue5.4e-65
Seed eggNOG ortholog2880.D7FSU0
KEGG koko:K07198
KEGG Pathwayko04068,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,ko05418,map04068,map04140,map04150,map04151,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410,map05418
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0583@1,KOG0583@2759
EC2.7.11.11
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
Exons5
Model size849
Cds size849
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9120.21136.1prot_M-pyrifera_M_contig9120.21136.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9120 6846..11332 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816824.3070872-CDS-M-pyrifera_M_contig9120:6845..70621622816824.3070872-CDS-M-pyrifera_M_contig9120:6845..7062Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9120 6846..7062 -
1692278199.9774039-CDS-M-pyrifera_M_contig9120:6845..70621692278199.9774039-CDS-M-pyrifera_M_contig9120:6845..7062Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9120 6846..7062 -
1622816824.320572-CDS-M-pyrifera_M_contig9120:7107..72021622816824.320572-CDS-M-pyrifera_M_contig9120:7107..7202Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9120 7108..7202 -
1692278199.9938164-CDS-M-pyrifera_M_contig9120:7107..72021692278199.9938164-CDS-M-pyrifera_M_contig9120:7107..7202Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9120 7108..7202 -
1622816824.3324838-CDS-M-pyrifera_M_contig9120:8138..82981622816824.3324838-CDS-M-pyrifera_M_contig9120:8138..8298Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9120 8139..8298 -
1692278200.0033436-CDS-M-pyrifera_M_contig9120:8138..82981692278200.0033436-CDS-M-pyrifera_M_contig9120:8138..8298Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9120 8139..8298 -
1622816824.3449576-CDS-M-pyrifera_M_contig9120:9529..97411622816824.3449576-CDS-M-pyrifera_M_contig9120:9529..9741Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9120 9530..9741 -
1692278200.0129662-CDS-M-pyrifera_M_contig9120:9529..97411692278200.0129662-CDS-M-pyrifera_M_contig9120:9529..9741Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9120 9530..9741 -
1622816824.3571374-CDS-M-pyrifera_M_contig9120:11167..113321622816824.3571374-CDS-M-pyrifera_M_contig9120:11167..11332Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9120 11168..11332 -
1692278200.023176-CDS-M-pyrifera_M_contig9120:11167..113321692278200.023176-CDS-M-pyrifera_M_contig9120:11167..11332Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9120 11168..11332 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9120.21136.1

>prot_M-pyrifera_M_contig9120.21136.1 ID=prot_M-pyrifera_M_contig9120.21136.1|Name=mRNA_M-pyrifera_M_contig9120.21136.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=283bp
LSELDHPSVVKLIEVFNSDTHVFMAMEAVDGRELYDEINRKGKLEERRAS
DLFLQLENLLLSRDGTRMKVTDFGLAARLDEWEGDPKHQRRRSWGAKRKQ
QGRQQTACGTPSYAAPEIITSSETQGYDARGVDIWCAGVVLYAMVTGKMP
FRGEDVNATLDIIRAKEPEYPEQLSPEITHLLRSMLQKDPSKRMSVAGVL
AHPWTTLPPKHISSRQAASSTEQEDLAAAARDAIETAKQAASAAEKAAVA
AREAEATAAAALAAAADASRSSSPALARSAKGE
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mRNA from alignment at M-pyrifera_M_contig9120:6846..11332-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9120.21136.1 ID=mRNA_M-pyrifera_M_contig9120.21136.1|Name=mRNA_M-pyrifera_M_contig9120.21136.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4487bp|location=Sequence derived from alignment at M-pyrifera_M_contig9120:6846..11332- (Macrocystis pyrifera P11B4 male)
CTGTCAGAGTTGGATCACCCATCCGTGGTGAAGCTGATAGAGGTGTTCAA
CTCGGATACTCACGTCTTCATGGCGATGGAGGCTGTAGACGGTCGAGAAC
TGTACGATGAAATCAACCGCAAGGGGAAGTTGGAGGAGCGCCGGGCGAGC
GACCTGTTCCTACAGGTAACGGGTGGCTTCTTCAAACTCAAACCCCTTTT
AGTACCGCTCTCATTTTGGGGAAAAACCAGTCTAATTCCAAGTGATTTGT
CCCCGAAACGGGACTACAGTACTAAATGGGTTAAGAGGGGCCGTAGCAGA
GGCCGCAGCACGATGTCCGGAGAATAGCGTGCCACAGCACCCGTTTGTGC
TGTGGGTGTTGCATCAAATCAAGCACCTGGTATATCATTGTTTACTGTTG
TTTGCTTAAAGTACAGGATTGAGGTTGTACACCGCGCCGCGTTCTCACCC
ACACCATGGGTGCGTACGTTTTGTGATATTTATTTTGGTCTGTTTATTTA
TTTTTCATGTAGAAACTCGTGACCGTAACTGCGCTGGCTGTGGCCCGCGC
GCGACTATGGTCCAATGAGCTTTCTCCTCATCGAAAGGACTTTTGACAAC
ATCTGCCTCTGCTGGGTGATATCCACCGTCGACTTTTCACACCGATAGAT
CACCTATTCCTACTTGATGATCTAGATCTTTCAGGGCGGGTAGATCCTTG
ATATGCATGATATATAGGTCATGCTGCCGGGTGGGAGCCGCACGTACAAC
CGGCATGATCCGGGACTGTGTTTGCTGGGTTGGATGCTGTGCTGTTTCAG
ATGATCTACAGCACATAGATAGATCGTGATCTATCTCTGGATGATCTGTC
CGAGGCTGTGCAGACTGTTGGCAGGCATGATGAGAAAAAAACTTTTTCTA
TCGCCGCAATGAGTTTTTTTTTTTTTTTTCATTCCAAGTAATCTTTATCC
CCAAAGCGTGGGTACAGTAGTCCTGGAAGGGTCGGAACCACCCTTTGGGC
ACACCTACCTCCCCCTGCTGTGGCGCTCGAGCACCCAGACGGCTCCTGCC
CTGCCGAGGCACTCTGAACGCCTCGGTCTGCTGTTGGACGAGCACCTCAC
GCGCAGGCGGCCCCCGTTTTTTTCCCTTTCTTTCTCGCGCCTCTCGTTTG
ACGCCCCACGCCTCCTTCCCGCAGCTCTCTGATGGTATATACGCAGTGTC
GATTTCATGGTCAACATGGTTTCTATACTCATATATCGGGGGACCATAGT
AAATAGGACCAGATAGGTAAACATAGTAAATAGGACCAAATATTTGTTAG
TAAAAATAGGTAAACATGTGGGTTGTATGTGTACTATAGGTCCTGTTAAC
TATGGGCCCCCGTAATAGTACGAATAAACAGTTTGTTTCATATTTTTTGT
TTTCAAGGTTCGGGTGAAACTGGCCCCCGCTCTGTTCACACACGCTCGCG
CGCTCGCTCGCTCCGGCTTTTTTTTTTTCTGTTAATTGTTGTATCACGCC
TGCCTCGTGTCTAAACGCCCCACTTTTTTTACAGCTGATGGTGGCGGTGG
ATTACATCCACTCCTTGGGGGTAGCCCACCGAGACCTGAAGTTGGAGAAC
TTGCTTCTCAGCAGAGACGGGACGCGGATGAAGGTGACGGATTTCGGCCT
GGCGGCACGCCTGGACGAGTGGGAAGGGGACCCGAAGCACCAGAGGCGGA
GGTCTTGGGGGGCGAAGCGCAAGCAGCAGGGGCGGCAGCAGACGGCGTGC
GGGACTCCTTCTTACGCGGCGCCGGAGATAATCACGTCGTCAGAAACCCA
AGGGTGAGATTTTTTATCGTTTGGCTCGTAGTTCGTTCTAAGCGGGGACG
GTGGACGTAACAGCGACGCTTGGGGGGGGGCGGGAGGTGCTCATGTTATG
CAAGGCCGTAGTTGTATGACCATAACACCCTCGCATCCCTATAAGCCGGC
ACGGACCACGCCGGGTTTGCACCGACCAGACAGGCGTTCTGATGAGGGGG
TGGCGGTTATGTTTACCGTACCTACATGCCAGAATCCTCTTCTCAACGGC
ACCCACACTTGGTGGACAGTACGTATAGTGGTAGTTCATAGATGGAAACC
GTGGGATGAATGCCAGCCTTGTTCCTGATATTTTTAGTTTCGTTGAGACA
CATAACGTCAGCCCTAGACGTGACTAAAGCCAGGTTCCTCTTACTATAGT
TTTTTTCCGCCGCTCGCCCGCAACAGAAGCAATAACAGGGGTGCTGGTTC
GTACAGCTCCCCCGCAATTTAGTCCCCATGGGTCTGTTTTTCCAGCAGTG
GGCTCTATAACGCCTTCGCGACTGCACCCTCATTTTGGAGATGAACTGAT
GGTGACACTTGCGCACCTAGGATAGATCATTAGCTGTATCATCTGCTGTG
ATCTATCTGTATAGTACAGATCCCACCCAAGACACATGTGCTAACGTAGA
TGATGCAGATTCTACAGCTCCCACCCGGCAAAATGAGCTATTAATAGAAT
GCACAGATCAGTAAGATAGCTGCCCTGGAAGATGTAGATCATGAAATGGG
AATCGATTGTCTGTTTTCCGAGGTGCGGCCTGCTTGGAGTTGGAGGTAGT
ATTAATAGGTCGTTCTCGCCGTGGTAGAAAAGCGCTTTTAAAGCGTCCTG
GGCTCGTCACCGCTGCGCAGCACCCGATTGAGTACAAAAGCAGGCAGACG
CTACGTGTTGGTAGGAGGCTTGTCCTCCTTGCTTCCCATCGTCGCCCTCC
GCCTCCGCCTAACGAGTTGTTGCTCCCGGTTGCTTTCTAGCGGGCGAGCT
AAGCAAACAACAGACCGAACAATATAATAGTATTGGCACCACGTAGCGCT
GTGTTCGGAAATGCTAGAGCAGCGTTTGAACGTTCATCCCCAAGGCCTCA
CGGACGCACTCTGCATCCCAGAACATGACAGACAATACATAAATATGAAT
CGAACACGTCGAGCTTACGCCGACACAAACAAACGTGCGCAATTATTTTT
GTGCTACCATCTCCGCCCCCACCCCCACCCCCAGGTACGACGCCCGCGGG
GTAGACATCTGGTGCGCCGGGGTTGTCCTGTACGCGATGGTGACGGGTAA
AATGCCGTTCCGAGGGGAAGACGTCAACGCGACGTTGGATATCATCCGTG
CCAAGGAGCCAGAGTACCCCGAGCAGCTATCCCCTGAGATAACGGTGAGG
GGCGTCTCCGCCGGTGTGCCCGTACATTGTGTCGTGTCGAGTGCTGTTGA
TGTTGGGGGGGGGGTTGTTGGCGTATGTGGGCTTTGTAAGCGTTTCGTAC
GTACCTGGTACCAGCATAGTTTTAAGTGCAAGGTTTTCCCCTTTCGAGGC
ATTCGGACGTGGGAGTGACGCAAGGTAAAAAAAGCGATGACAGGTTTGTG
TTTAGTGCAGCTGGAAAAAAAACGGGAGGCCCACCCGCCGTTGAAATTTT
GCAAGTCTATAATACAGTCCAAGAAACGGAAGGCAGAACGACCAGCGAAA
GGAAAACGGTACACATATATTTACCAGGTATATACATATATACAGAACGC
TGCTGCGAGTCCGCCCCTTTGTTGGCCTCTGTTCCTGCTGATGAGTCGTG
TGCAGCAGCATGCGTCTACTGGAAGTATACGCTGGTGCTTAGGGTATGCA
ATAGGCTCGTAATGTTGGACCTTCCACTCAAGTACAGTATCCAACTCTTG
TTCAGGTACGAAGTATGATCTTTTTTGAGTTTTTGCACATGTGCAGTGCA
AATTGTTTCTGTTTTACGTATATAGGTCGTTGTTCATGAGCTGCACACGA
TCGCCTGACCCGGCGCATCCAGAGCGCCGATCGTGACTGCATGCGCGACC
CCACACCTGGTGTCAAAAGTTGCCGGCGGGTACACACGATCATGTTTTGT
TTTTGTATCTCCACCGGGGATCTGGTGATGTTTTTCCTGTGGGCGATCCG
CTGAAAACCCTTCGATTAGTTCCGTTACGTTGGCTGCTGTTGTTATTCTT
CTCTCATTGAAAAAATATACATTTCGAGTCGCCACTTTGACAAGGGTTTA
GAGCTCCCGGCGCACACACTTGACCGAGAATGACCAGCACCCCCGCTTCA
CCCTCTTCCCGCTTCCCGTGGTTTTCACAGCACTTGCTGAGGAGCATGCT
CCAAAAAGACCCGTCCAAGCGCATGTCGGTGGCCGGAGTCCTGGCCCACC
CCTGGACCACCCTGCCGCCGAAACAGTCGCCCAATTCCTCCAAGAAGCTC
GAGTCCTTGCTCCGCGCGAGCATTTCGTCTCGGCAGGCGGCCTCCTCCAC
GGAGCAAGAAGACCTCGCCGCGGCCGCGAGGGACGCGATAGAGACCGCGA
AACAGGCGGCCTCGGCGGCGGAAAAGGCGGCGGTCGCGGCGCGAGAGGCG
GAGGCCACCGCCGCGGCAGCCCTTGCCGCGGCTGCCGATGCGTCTAGGTC
CTCGTCGCCGGCCCTCGCGCGCAGCGCTAAAGGCGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig9120:6846..11332-

>mRNA_M-pyrifera_M_contig9120.21136.1 ID=mRNA_M-pyrifera_M_contig9120.21136.1|Name=mRNA_M-pyrifera_M_contig9120.21136.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1698bp|location=Sequence derived from alignment at M-pyrifera_M_contig9120:6846..11332- (Macrocystis pyrifera P11B4 male)
CTGTCAGAGTTGGATCACCCATCCGTGGTGAAGCTGATAGAGGTGTTCAA
CTCGGATACTCACGTCTTCATGGCGATGGAGGCTGTAGACGGTCGAGAAC
TGTACGATGAAATCAACCGCAAGGGGAAGTTGGAGGAGCGCCGGGCGAGC
GACCTGTTCCTACAGCTGTCAGAGTTGGATCACCCATCCGTGGTGAAGCT
GATAGAGGTGTTCAACTCGGATACTCACGTCTTCATGGCGATGGAGGCTG
TAGACGGTCGAGAACTGTACGATGAAATCAACCGCAAGGGGAAGTTGGAG
GAGCGCCGGGCGAGCGACCTGTTCCTACAGTTGGAGAACTTGCTTCTCAG
CAGAGACGGGACGCGGATGAAGGTGACGGATTTCGGCCTGGCGGCACGCC
TGGACGAGTGGGAAGGGGACCCGAAGCACCAGAGGCGGAGGTCTTGGGGG
GCGAAGCGCAAGCAGCAGGGGCGGCAGCAGACGGCGTGCGGGACTCCTTC
TTACGCGGCGCCGGAGATAATCACGTCGTCAGAAACCCAAGGTTGGAGAA
CTTGCTTCTCAGCAGAGACGGGACGCGGATGAAGGTGACGGATTTCGGCC
TGGCGGCACGCCTGGACGAGTGGGAAGGGGACCCGAAGCACCAGAGGCGG
AGGTCTTGGGGGGCGAAGCGCAAGCAGCAGGGGCGGCAGCAGACGGCGTG
CGGGACTCCTTCTTACGCGGCGCCGGAGATAATCACGTCGTCAGAAACCC
AAGGGTACGACGCCCGCGGGGTAGACATCTGGTGCGCCGGGGTTGTCCTG
TACGCGATGGTGACGGGTAAAATGCCGTTCCGAGGGGAAGACGTCAACGC
GACGTTGGATATCATCCGTGCCAAGGAGCCAGAGTACCCCGAGCAGCTAT
CCCCTGAGATAACGGTACGACGCCCGCGGGGTAGACATCTGGTGCGCCGG
GGTTGTCCTGTACGCGATGGTGACGGGTAAAATGCCGTTCCGAGGGGAAG
ACGTCAACGCGACGTTGGATATCATCCGTGCCAAGGAGCCAGAGTACCCC
GAGCAGCTATCCCCTGAGATAACGCACTTGCTGAGGAGCATGCTCCAAAA
AGACCCGTCCAAGCGCATGTCGGTGGCCGGAGTCCTGGCCCACCCCTGGA
CCACCCTGCCGCCGAAACACACTTGCTGAGGAGCATGCTCCAAAAAGACC
CGTCCAAGCGCATGTCGGTGGCCGGAGTCCTGGCCCACCCCTGGACCACC
CTGCCGCCGAAACACATTTCGTCTCGGCAGGCGGCCTCCTCCACGGAGCA
AGAAGACCTCGCCGCGGCCGCGAGGGACGCGATAGAGACCGCGAAACAGG
CGGCCTCGGCGGCGGAAAAGGCGGCGGTCGCGGCGCGAGAGGCGGAGGCC
ACCGCCGCGGCAGCCCTTGCCGCGGCTGCCGATGCGTCTAGGTCCTCGTC
GCCGGCCCTCGCGCGCAGCGCTAAAGGCGAGCATTTCGTCTCGGCAGGCG
GCCTCCTCCACGGAGCAAGAAGACCTCGCCGCGGCCGCGAGGGACGCGAT
AGAGACCGCGAAACAGGCGGCCTCGGCGGCGGAAAAGGCGGCGGTCGCGG
CGCGAGAGGCGGAGGCCACCGCCGCGGCAGCCCTTGCCGCGGCTGCCGAT
GCGTCTAGGTCCTCGTCGCCGGCCCTCGCGCGCAGCGCTAAAGGCGAG
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