mRNA_M-pyrifera_M_contig91189.21133.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91189.21133.1
Unique NamemRNA_M-pyrifera_M_contig91189.21133.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91189.21133.1 vs. uniprot
Match: A0A2I0WKA9_9ASPA (Alpha-1,3-glucosyltransferase n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WKA9_9ASPA)

HSP 1 Score: 103 bits (258), Expect = 2.120e-23
Identity = 60/135 (44.44%), Postives = 79/135 (58.52%), Query Frame = 1
Query:    1 EAVSFLSSRGAAEGKEGRGTKLLLRLTVIASEALLFLPPLFVFL--------SGGGEEGAWAAVLQALLEPCLLLVDHGHFQYNAVSLGLSLGAVVCIGWRAPLAASVLFVAATQFKIMAIYYSPVFFFYLLSEA 381
            E+++ ++SRG     E  G+KLL+R TV+ S+ LLF P    F           G E  A   +   LL PCL+L+DHGHFQYN +SLGL+LGA+  I  R    ASVLF  A   K M++YY+P FF YLL + 
Sbjct:  115 ESLALITSRGF----ESHGSKLLMRWTVLVSDFLLFFPAAVCFAVVYFRRFGGSGRERSAPWLLAMILLNPCLILIDHGHFQYNCISLGLTLGAIAAILLRHEFVASVLFSLAINHKQMSMYYAPAFFSYLLGKC 245          
BLAST of mRNA_M-pyrifera_M_contig91189.21133.1 vs. uniprot
Match: UPI0009E6557B (probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1 n=3 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E6557B)

HSP 1 Score: 103 bits (258), Expect = 2.130e-23
Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 1
Query:    1 EAVSFLSSRGAAEGKEGRGTKLLLRLTVIASEALLFLPPLFVFL-------SGGGEEGAWAAVL-QALLEPCLLLVDHGHFQYNAVSLGLSLGAVVCIGWRAPLAASVLFVAATQFKIMAIYYSPVFFFYLLSEA 381
            E+++  +SRG     E  G+KLL+R TV+ S+ L+F P    F+        G G EG+ A +L   LL PCL+L+DHGHFQYN +SLGL++GA+  I  R    ASVLF  A   K M++YY+P FF YLL + 
Sbjct:  115 ESLALNTSRGF----ESHGSKLLMRWTVLVSDLLVFFPAAVCFVVVYCRRFGGNGGEGSSAWLLAMILLNPCLILIDHGHFQYNCISLGLTIGAIAAILSRHEFIASVLFSLAINHKQMSMYYAPAFFSYLLGKC 245          
BLAST of mRNA_M-pyrifera_M_contig91189.21133.1 vs. uniprot
Match: A0A6I9S5X9_ELAGV (Alpha-1,3-glucosyltransferase n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9S5X9_ELAGV)

HSP 1 Score: 98.2 bits (243), Expect = 2.520e-22
Identity = 61/136 (44.85%), Postives = 81/136 (59.56%), Query Frame = 1
Query:    1 EAVSFLSSRGAAEGKEGRGTKLLLRLTVIASEALLFLPPLFVFL-------SGGGEEGAWAAVLQA--LLEPCLLLVDHGHFQYNAVSLGLSLGAVVCIGWRAPLAASVLFVAATQFKIMAIYYSPVFFFYLLSEA 381
            +AV+   SRG     E    KLL+R TV++S+ LLF P    F+        GG +EG  A  L A  LL PCL+L+DHGHFQYN +SLGL+LGA+  +  R  L AS LF  A   K M++Y++P FF +LL + 
Sbjct:  119 DAVALSLSRGF----ESPVLKLLMRWTVLSSDLLLFFPAALYFVWVYCRRNVGGDKEGRSAPWLLAMILLNPCLILIDHGHFQYNCISLGLTLGAIAAVLSRNELVASALFSLAINHKQMSLYFAPAFFSHLLGKC 250          
BLAST of mRNA_M-pyrifera_M_contig91189.21133.1 vs. uniprot
Match: A0A8K0HCI0_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0HCI0_9ROSA)

HSP 1 Score: 99.8 bits (247), Expect = 6.920e-22
Identity = 57/135 (42.22%), Postives = 82/135 (60.74%), Query Frame = 1
Query:    1 EAVSFLSSRGAAEGKEGRGTKLLLRLTVIASEALLFLPPLFVFL--------SGGGEEGAWAAVLQALLEPCLLLVDHGHFQYNAVSLGLSLGAVVCIGWRAPLAASVLFVAATQFKIMAIYYSPVFFFYLLSEA 381
            E+V+  +SRG    +E    KLL+R TV++S+AL+F P ++ F+        SG   E AW   L  L+ PCL+L+DHGHFQYN +SLGL++GA+  +     L ASVL+  A   K M+ Y++P FF YL  + 
Sbjct:  114 ESVAIFTSRG----QESYLGKLLMRWTVLSSDALIFFPAVWYFVVGYYASCRSGSKSEVAWHIAL-ILVNPCLILIDHGHFQYNCISLGLTVGAIASVLSNKDLVASVLYCLALSHKQMSAYFAPAFFSYLFGKC 243          
BLAST of mRNA_M-pyrifera_M_contig91189.21133.1 vs. uniprot
Match: A0A067K9N2_JATCU (Alpha-1,3-glucosyltransferase n=4 Tax=Jatropha curcas TaxID=180498 RepID=A0A067K9N2_JATCU)

HSP 1 Score: 98.6 bits (244), Expect = 1.840e-21
Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 1
Query:    7 VSFLSSRGAAEGKEGRGTKLLLRLTVIASEALLFLPPLFVFL--------SGGGEEGAWAAVLQALLEPCLLLVDHGHFQYNAVSLGLSLGAVVCIGWRAPLAASVLFVAATQFKIMAIYYSPVFFFYLLSEA 381
            VS  +SRG     E    KLL+R TV++S+AL+F P +F F+        SG   + AW   +  L+ PCL+L+DHGHFQYN +SLGL+LGAV  +  +  L A+VLF  +   K M+ Y++P FF +LL   
Sbjct:  124 VSLFTSRG----YESYLGKLLMRWTVLSSDALIFFPAIFYFILVYYRNCSSGRKSDVAWHIAI-VLINPCLILIDHGHFQYNCISLGLTLGAVAAVLSQKNLVAAVLFCLSLNHKQMSAYFAPAFFSHLLGNC 251          
BLAST of mRNA_M-pyrifera_M_contig91189.21133.1 vs. uniprot
Match: UPI000CED7AEA (probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED7AEA)

HSP 1 Score: 98.6 bits (244), Expect = 1.880e-21
Identity = 60/135 (44.44%), Postives = 80/135 (59.26%), Query Frame = 1
Query:    1 EAVSFLSSRGAAEGKEGRGTKLLLRLTVIASEALLFLPPLFVFL--------SGGGEEGAWAAVLQALLEPCLLLVDHGHFQYNAVSLGLSLGAVVCIGWRAPLAASVLFVAATQFKIMAIYYSPVFFFYLLSEA 381
            E+VS  +SRG     E    KLL+R TV++S+AL+F P +F F+        SG   E AW  +   LL PCL+L+DHGHFQYN +SLGL +GA+  I     L A VLF  A   K M+ Y++P FF +LL + 
Sbjct:  129 ESVSLFASRG----HESYLGKLLMRWTVLSSDALVFFPAVFHFIIVYHAGRKSGRKSEIAWH-IAMILLNPCLILIDHGHFQYNCISLGLIVGAIASILSNKDLVACVLFSLALSHKQMSAYFAPAFFSHLLGKC 258          
BLAST of mRNA_M-pyrifera_M_contig91189.21133.1 vs. uniprot
Match: A0A1Q3C6E5_CEPFO (Alpha-1,3-glucosyltransferase n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3C6E5_CEPFO)

HSP 1 Score: 98.2 bits (243), Expect = 2.470e-21
Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = 1
Query:    1 EAVSFLSSRGAAEGKEGRGTKLLLRLTVIASEALLFLPPLFVFL-------SGGGEEGAWAAVLQALLEPCLLLVDHGHFQYNAVSLGLSLGAVVCIGWRAPLAASVLFVAATQFKIMAIYYSPVFFFYLLSEA 381
            ++VS  +SRG     E    KLL+R TV++S+AL+F P +  F+         G +      +   LL PCL+L+DHGHFQYN++SLGL++GAV  I  +  L ASVLF  A   K M+ YY+P FF +LL + 
Sbjct:  112 DSVSLFTSRG----HESHLGKLLMRWTVLSSDALIFFPSVLYFIWVYYTRWPSGHKSDIARHIAIVLLNPCLILIDHGHFQYNSISLGLTVGAVAAILAQKELVASVLFSLALNHKQMSAYYAPAFFSHLLGKC 241          
BLAST of mRNA_M-pyrifera_M_contig91189.21133.1 vs. uniprot
Match: A0A6P5GJQ6_ANACO (Alpha-1,3-glucosyltransferase n=4 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GJQ6_ANACO)

HSP 1 Score: 98.2 bits (243), Expect = 2.600e-21
Identity = 55/131 (41.98%), Postives = 79/131 (60.31%), Query Frame = 1
Query:   28 GAAEGKEGRGTKLLLRLTVIASEALLFLPPLF--------VFLSGG-----GEEGAWAAVLQALLEPCLLLVDHGHFQYNAVSLGLSLGAVVCIGWRAPLAASVLFVAATQFKIMAIYYSPVFFFYLLSEA 381
            GA+ G E + +KLL+R TV++S+ ++F P           VF+ GG     G    W   +  LL PCL+L+DHGHFQYN +SLGL+LGA+  +  +  LAAS LF  A   K M++Y++P FF +LL + 
Sbjct:  132 GASRGFESKPSKLLMRWTVLSSDLIVFFPAALYFVWVYRRVFVGGGVCDRDGGSVLWLLAM-ILLNPCLILIDHGHFQYNCISLGLTLGAIAAVLSQNELAASALFTLAINHKQMSLYFAPAFFSHLLGKC 261          
BLAST of mRNA_M-pyrifera_M_contig91189.21133.1 vs. uniprot
Match: A0A2N9GE75_FAGSY (Alpha-1,3-glucosyltransferase n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GE75_FAGSY)

HSP 1 Score: 95.5 bits (236), Expect = 4.230e-21
Identity = 58/135 (42.96%), Postives = 78/135 (57.78%), Query Frame = 1
Query:    1 EAVSFLSSRGAAEGKEGRGTKLLLRLTVIASEALLFLPPLFVFL--------SGGGEEGAWAAVLQALLEPCLLLVDHGHFQYNAVSLGLSLGAVVCIGWRAPLAASVLFVAATQFKIMAIYYSPVFFFYLLSEA 381
            E+VS  +SRG     E    KLL+R TV++S+AL+F P +F F+        SG     AW  +   LL PCL+L+DHGHFQYN +SLGL++GAV  +     L A  LF  A   K M  Y++P FF +LL + 
Sbjct:  119 ESVSLFTSRG----HESYLGKLLMRWTVLSSDALVFFPAVFYFVLAYHSGRPSGQKTHIAWH-IAMILLNPCLMLIDHGHFQYNCISLGLTVGAVAAVLSNKELVACSLFSLALNHKQMTAYFAPAFFSHLLGKC 248          
BLAST of mRNA_M-pyrifera_M_contig91189.21133.1 vs. uniprot
Match: A0A067F718_CITSI (Alpha-1,3-glucosyltransferase n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067F718_CITSI)

HSP 1 Score: 95.5 bits (236), Expect = 4.760e-21
Identity = 56/135 (41.48%), Postives = 79/135 (58.52%), Query Frame = 1
Query:    1 EAVSFLSSRGAAEGKEGRGTKLLLRLTVIASEALLFLPPLFVFL--------SGGGEEGAWAAVLQALLEPCLLLVDHGHFQYNAVSLGLSLGAVVCIGWRAPLAASVLFVAATQFKIMAIYYSPVFFFYLLSEA 381
            ++VS  +SRG     E    KLL+R TV++S+ L+F P +F F         S    + AW  +   LL PCL+L+DHGHFQYN +SLGL++ A+  I  +  L AS LF  A   K M++YY+P FF +LL + 
Sbjct:  124 DSVSLFTSRG----YETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWH-IAMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLGKC 253          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91189.21133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I0WKA9_9ASPA2.120e-2344.44Alpha-1,3-glucosyltransferase n=1 Tax=Dendrobium c... [more]
UPI0009E6557B2.130e-2345.19probable dolichyl pyrophosphate Man9GlcNAc2 alpha-... [more]
A0A6I9S5X9_ELAGV2.520e-2244.85Alpha-1,3-glucosyltransferase n=1 Tax=Elaeis guine... [more]
A0A8K0HCI0_9ROSA6.920e-2242.22Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A0A067K9N2_JATCU1.840e-2142.86Alpha-1,3-glucosyltransferase n=4 Tax=Jatropha cur... [more]
UPI000CED7AEA1.880e-2144.44probable dolichyl pyrophosphate Man9GlcNAc2 alpha-... [more]
A0A1Q3C6E5_CEPFO2.470e-2142.54Alpha-1,3-glucosyltransferase n=1 Tax=Cephalotus f... [more]
A0A6P5GJQ6_ANACO2.600e-2141.98Alpha-1,3-glucosyltransferase n=4 Tax=Ananas comos... [more]
A0A2N9GE75_FAGSY4.230e-2142.96Alpha-1,3-glucosyltransferase n=1 Tax=Fagus sylvat... [more]
A0A067F718_CITSI4.760e-2141.48Alpha-1,3-glucosyltransferase n=1 Tax=Citrus sinen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91189contigM-pyrifera_M_contig91189:39..781 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score97.4
Seed ortholog evalue5.2e-18
Seed eggNOG ortholog3702.AT5G38460.2
KEGG koko:K03848
KEGG ReactionR06262
KEGG Pathwayko00510,ko01100,map00510,map01100
KEGG ModuleM00055
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006490,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0031984,GO:0034645,GO:0036211,GO:0042175,GO:0042281,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046527,GO:0070085,GO:0071704,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Belongs to the ALG6 ALG8 glucosyltransferase family
EggNOG OGs37RK3@33090,3G9JQ@35493,3HTU1@3699,KOG2575@1,KOG2575@2759
EC2.4.1.267
COG Functional cat.EG
CAZyGT57
Best tax levelBrassicales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons2
Model size396
Cds size396
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816824.200098-CDS-M-pyrifera_M_contig91189:38..1381622816824.200098-CDS-M-pyrifera_M_contig91189:38..138Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91189 39..138 -
1692278199.9121356-CDS-M-pyrifera_M_contig91189:38..1381692278199.9121356-CDS-M-pyrifera_M_contig91189:38..138Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91189 39..138 -
1622816824.212724-CDS-M-pyrifera_M_contig91189:485..7811622816824.212724-CDS-M-pyrifera_M_contig91189:485..781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91189 486..781 -
1692278199.9273894-CDS-M-pyrifera_M_contig91189:485..7811692278199.9273894-CDS-M-pyrifera_M_contig91189:485..781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91189 486..781 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91189.21133.1prot_M-pyrifera_M_contig91189.21133.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91189 39..781 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91189.21133.1

>prot_M-pyrifera_M_contig91189.21133.1 ID=prot_M-pyrifera_M_contig91189.21133.1|Name=mRNA_M-pyrifera_M_contig91189.21133.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
EAVSFLSSRGAAEGKEGRGTKLLLRLTVIASEALLFLPPLFVFLSGGGEE
GAWAAVLQALLEPCLLLVDHGHFQYNAVSLGLSLGAVVCIGWRAPLAASV
LFVAATQFKIMAIYYSPVFFFYLLSEAYYQG*
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mRNA from alignment at M-pyrifera_M_contig91189:39..781-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91189.21133.1 ID=mRNA_M-pyrifera_M_contig91189.21133.1|Name=mRNA_M-pyrifera_M_contig91189.21133.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=743bp|location=Sequence derived from alignment at M-pyrifera_M_contig91189:39..781- (Macrocystis pyrifera P11B4 male)
GAGGCGGTGTCGTTTCTCTCCTCTCGCGGTGCTGCCGAAGGAAAGGAGGG GAGAGGCACCAAACTCCTCCTCCGCCTCACTGTCATTGCATCAGAGGCAT TGCTCTTCCTCCCACCGCTCTTTGTGTTCCTCTCTGGCGGGGGAGAGGAG GGGGCCTGGGCTGCTGTGCTCCAGGCGCTGCTCGAGCCCTGTCTCCTGCT GGTGGACCACGGCCACTTCCAGTACAACGCCGTCAGCCTTGGTCTCTCCC TTGGGGCCGTCGTCTGCATTGGCTGGCGCGCTCCTCTTGCTGCAAGGTAC CCCAGTGGACGCTAACAGACACGTTCACACACACACACGCACACACTAAG CACTCTGCACTCACGAAGCACACACTCAACAGACACATACTACACACACT CTCTCTCTCTCTTTCACTCTTTCTCTCTCACTCACACTCTCTCTCTCACT CACTCTCACACTCACACTCGCACTCACACTCACACTCACTCTCACACTCA GTCACACTCACACTCACACTCAGTCACACTCACACCCACACCCTCTCACA CGCACACACACACACACTCTCTCTCTCACGTACTTGATGTACGCACGGAG ATACACAACACACGCACTCTCAATGCCTGCTGACGAGGCCCAGCGTACTC TTTGTGGCGGCGACGCAGTTTAAGATTATGGCAATCTACTACTCGCCTGT GTTCTTCTTCTACCTTCTCTCGGAGGCCTACTATCAAGGGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91189:39..781-

>mRNA_M-pyrifera_M_contig91189.21133.1 ID=mRNA_M-pyrifera_M_contig91189.21133.1|Name=mRNA_M-pyrifera_M_contig91189.21133.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig91189:39..781- (Macrocystis pyrifera P11B4 male)
GAGGCGGTGTCGTTTCTCTCCTCTCGCGGTGCTGCCGAAGGAAAGGAGGG
GAGAGGCACCAAACTCCTCCTCCGCCTCACTGTCATTGCATCAGAGGCAT
TGCTCTTCCTCCCACCGCTCTTTGTGTTCCTCTCTGGCGGGGGAGAGGAG
GGGGCCTGGGCTGCTGTGCTCCAGGCGCTGCTCGAGCCCTGTCTCCTGCT
GGTGGACCACGGCCACTTCCAGTACAACGCCGTCAGCCTTGGTCTCTCCC
TTGGGGCCGTCGTCTGCATTGGCTGGCGCGCTCCTCTTGCTGCAAGGAGG
CGGTGTCGTTTCTCTCCTCTCGCGGTGCTGCCGAAGGAAAGGAGGGGAGA
GGCACCAAACTCCTCCTCCGCCTCACTGTCATTGCATCAGAGGCATTGCT
CTTCCTCCCACCGCTCTTTGTGTTCCTCTCTGGCGGGGGAGAGGAGGGGG
CCTGGGCTGCTGTGCTCCAGGCGCTGCTCGAGCCCTGTCTCCTGCTGGTG
GACCACGGCCACTTCCAGTACAACGCCGTCAGCCTTGGTCTCTCCCTTGG
GGCCGTCGTCTGCATTGGCTGGCGCGCTCCTCTTGCTGCAAGCGTACTCT
TTGTGGCGGCGACGCAGTTTAAGATTATGGCAATCTACTACTCGCCTGTG
TTCTTCTTCTACCTTCTCTCGGAGGCCTACTATCAAGGGTGACGTACTCT
TTGTGGCGGCGACGCAGTTTAAGATTATGGCAATCTACTACTCGCCTGTG
TTCTTCTTCTACCTTCTCTCGGAGGCCTACTATCAAGGGTGA
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