|
Homology
BLAST of mRNA_M-pyrifera_M_contig9115.21130.1 vs. uniprot
Match: D7FUY8_ECTSI (Similar to Cullin-1 (CUL-1) isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY8_ECTSI) HSP 1 Score: 446 bits (1147), Expect = 1.950e-149 Identity = 217/248 (87.50%), Postives = 234/248 (94.35%), Query Frame = 1
Query: 1 MTLLAPKAIDFEDTWVLLESSLITILQDLGQGFPNGLWMSLYTGVYKLCTKPMDPQHSKLYGRLKETLELYVAGVLKGLLAFDNVTSHSYIELLVRYRTSFHNYSVGMKYGSELFKYLDRHWVTTNHCETGRSPKIGVYFVHEMSLIVWKERVFEALKERLRRNTMRVVNAAREKNLTDLDDNDAVKSLLKTFETLGFEKRDRSHLFQTEMEDFLVTDTGKYYSRRGSDLLQHMSVPLYLKEVERYLQ 744
MTLL P+ IDF+DTWVLLESSLITILQDLGQGFPN LW+SLYTGVYKLCTKPMDPQHSKLY RLKETLELYVAGVLKGLLAFDN T+HSY ELLVRYRTSFHNYSVGM YGS+ FKYLDRHW+ TNHCETG SPK GVYFV EMSL+VWKERVFEALKERLR NTM+V+NAARE+NL++LDDNDAV+SLLKT+ETLGFEKRDRSHLFQTE+EDFLVTDTG+YYSRRGSDLLQHMSVP YL+EVERYLQ
Sbjct: 1 MTLLTPEPIDFDDTWVLLESSLITILQDLGQGFPNDLWISLYTGVYKLCTKPMDPQHSKLYARLKETLELYVAGVLKGLLAFDNATAHSYTELLVRYRTSFHNYSVGMHYGSDWFKYLDRHWINTNHCETGVSPKEGVYFVREMSLMVWKERVFEALKERLRHNTMKVINAARERNLSNLDDNDAVRSLLKTYETLGFEKRDRSHLFQTELEDFLVTDTGRYYSRRGSDLLQHMSVPRYLQEVERYLQ 248
BLAST of mRNA_M-pyrifera_M_contig9115.21130.1 vs. uniprot
Match: A0A835YSZ1_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ1_9STRA) HSP 1 Score: 298 bits (764), Expect = 2.900e-92 Identity = 148/248 (59.68%), Postives = 189/248 (76.21%), Query Frame = 1
Query: 1 MTLLAPKAIDFEDTWVLLESSLITILQDL-GQGFPNGLWMSLYTGVYKLCTKPMDPQHSKLYGRLKETLELYVAGVLKGLLAFDNVTSHSYIELLVRYRTSFHNYSVGMKYGSELFKYLDRHWVTTNHCETGRSPKIGVYFVHEMSLIVWKERVFEALKERLRRNTMRVVNAAREKNLTDLDDNDAVKSLLKTFETLGFEKRDRSHLFQTEMEDFLVTDTGKYYSRRGSDLLQHMSVPLYLKEVERYL 741
M+LL+P+ IDF++TW LLESSL+TIL D + FPN LWM+LYTGVYKLCTKPMD Q KLY +LKE LE YV GVL+GLLA++ T+H ++LL RYR +F NY+ GM Y +++F YLDRHWV TNHCETGRSP+ GVY V+EM+L+VWKE FE+LK +LR + M V+NAARE++ LDD AV+ +L T+E LG E+RDRS LFQ E+ED LV D +Y++RRG+ LL V YL+ VE +L
Sbjct: 1 MSLLSPEPIDFDETWGLLESSLLTILMDFPNKNFPNDLWMTLYTGVYKLCTKPMDAQPGKLYFKLKEVLEDYVDGVLQGLLAYEACTAHCSLDLLARYRGAFDNYATGMGYAADIFSYLDRHWVATNHCETGRSPQDGVYTVYEMALVVWKELAFESLKVKLRNHIMAVLNAARERDAPSLDDGGAVRGVLATYEALGMERRDRSALFQRELEDHLVADAKRYFARRGTALLAAAPVAAYLRAVEGFL 248
BLAST of mRNA_M-pyrifera_M_contig9115.21130.1 vs. uniprot
Match: W2PVV8_PHYPN (CULLIN_2 domain-containing protein n=34 Tax=Phytophthora TaxID=4783 RepID=W2PVV8_PHYPN) HSP 1 Score: 167 bits (423), Expect = 8.060e-44 Identity = 87/244 (35.66%), Postives = 143/244 (58.61%), Query Frame = 1
Query: 1 MTLLAPKAIDFEDTWVLLESSLITILQDLGQGFPNGLWMSLYTGVYKLCTKPMDPQHSKLYGRLKETLELYVAGVLKGLLAFDNVTSHSYIELLVRYRTSFHNYSVGMKYGSELFKYLDRHWVTTNHCETGRSPKIGVYFVHEMSLIVWKERVFEALKERLRRNTMRVVNAAREKNLTDLDDNDAVKSLLKTFETLGFEKRDRSHLFQTEMEDFLVTDTGKYYSRRGSDLLQHMSVPLYLKEVE 732
M+LL ++FE+ W ++ L +++ Q N W+ +Y+G+YK+CT P PQ L+ RL+ L +V +LK L A D E L Y TSF ++ G Y SELF+YL+R+W++ +HCETG++P GVY V E+SL +W + F LK+RL + + + +AAR K +D D + S ++T+ +LG ++D+ L++ E+E + D ++YS + LL +++ YL+E E
Sbjct: 51 MSLLKASTVNFENEWREMQPPLASLVTGTPQTLTNEKWLKMYSGIYKICTNPGAPQAEMLFFRLRGLLVKHVEAILKELNAIDGEP-----EFLSHYCTSFEAFTTGTSYISELFRYLNRYWISYSHCETGQAPVPGVYPVTELSLHIWHDIAFSKLKKRLVKAIIHIFHAARRKRSECFEDGDCIASTVQTYFSLGLCRQDQMSLYREELEQPFLEDAARFYSAKAIALLSRVTISEYLREAE 289
BLAST of mRNA_M-pyrifera_M_contig9115.21130.1 vs. uniprot
Match: A0A3M6V6L0_9STRA (CULLIN_2 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V6L0_9STRA) HSP 1 Score: 162 bits (411), Expect = 3.680e-42 Identity = 82/244 (33.61%), Postives = 141/244 (57.79%), Query Frame = 1
Query: 1 MTLLAPKAIDFEDTWVLLESSLITILQDLGQGFPNGLWMSLYTGVYKLCTKPMDPQHSKLYGRLKETLELYVAGVLKGLLAFDNVTSHSYIELLVRYRTSFHNYSVGMKYGSELFKYLDRHWVTTNHCETGRSPKIGVYFVHEMSLIVWKERVFEALKERLRRNTMRVVNAAREKNLTDLDDNDAVKSLLKTFETLGFEKRDRSHLFQTEMEDFLVTDTGKYYSRRGSDLLQHMSVPLYLKEVE 732
M+LL ++FE W +E L +++ Q N W+ +Y+G+YK+CT P PQ L+ RL+ +V +L L A D + Y Y +SF +++ G Y SELF+YL+R+W++ +HCETG +P GVY V E+SL +W + F LK+RL + + + ++AR +D D + ++T+ ++G ++D+ L++ E+E + DT +YYS + +LL +++ YL+E+E
Sbjct: 38 MSLLKTSVVNFEHEWKEMEPPLASLMTGTPQTLTNEKWLQMYSGIYKICTNPGAPQAELLFFRLRGMFIEHVESILNKLNAIDGEAAFLY-----HYCSSFESFATGTNYISELFRYLNRYWISYSHCETGHAPVPGVYPVTELSLHIWHDIAFSKLKKRLVKAIIHIFHSARRSKSECFEDGDCIARTVQTYFSIGLCRQDQMSLYREELEQPFLEDTARYYSAKAMELLSRVTISEYLQEIE 276
BLAST of mRNA_M-pyrifera_M_contig9115.21130.1 vs. uniprot
Match: A0A8K1CEG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEG8_PYTOL) HSP 1 Score: 162 bits (409), Expect = 6.290e-42 Identity = 86/244 (35.25%), Postives = 143/244 (58.61%), Query Frame = 1
Query: 1 MTLLAPKAIDFEDTWVLLESSLITILQDLGQGFPNGLWMSLYTGVYKLCTKPMDPQHSKLYGRLKETLELYVAGVLKGLLAFDNVTSHSYIELLVRYRTSFHNYSVGMKYGSELFKYLDRHWVTTNHCETGRSPKIGVYFVHEMSLIVWKERVFEALKERLRRNTMRVVNAAREKNLTDLDDNDAVKSLLKTFETLGFEKRDRSHLFQTEMEDFLVTDTGKYYSRRGSDLLQHMSVPLYLKEVE 732
M+LL ++ E W ++ L++++ Q N W+ +YTG+YK+CT P PQ L+ RL+ L +V + L ++ IE L RY TSF ++S G+ Y SELF+YL+R+W+T +HCETG++P GVY V E++L +W + F LK++L + M AAR++ +D + + ++++T+ LG K+D L++ ++E+ + +T YYS LL +S+ YL+EVE
Sbjct: 38 MSLLKASTVNLEKLWDDIQPPLVSLVSGAPQTMTNEKWLEMYTGIYKICTSPGVPQAEMLFFRLRGLLVEHVERIHHEL---RDIAGE--IEFLKRYYTSFQSFSTGVTYISELFRYLNRYWITYSHCETGQAPVPGVYPVTELALHIWHDIAFSRLKKKLVSSVMYAFRAARDERSEFFEDGEHISNIVETYFALGLVKKDPMALYKDDLEEPFLAETASYYSALAKTLLSKVSISEYLQEVE 276
BLAST of mRNA_M-pyrifera_M_contig9115.21130.1 vs. uniprot
Match: A0A225WZJ1_9STRA (Cullin family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZJ1_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.530e-41 Identity = 83/236 (35.17%), Postives = 136/236 (57.63%), Query Frame = 1
Query: 25 IDFEDTWVLLESSLITILQDLGQGFPNGLWMSLYTGVYKLCTKPMDPQHSKLYGRLKETLELYVAGVLKGLLAFDNVTSHSYIELLVRYRTSFHNYSVGMKYGSELFKYLDRHWVTTNHCETGRSPKIGVYFVHEMSLIVWKERVFEALKERLRRNTMRVVNAAREKNLTDLDDNDAVKSLLKTFETLGFEKRDRSHLFQTEMEDFLVTDTGKYYSRRGSDLLQHMSVPLYLKEVE 732
++FE W ++ L +++ Q N W+ +Y+G+YK+CT P PQ L+ RL+ L +V +LK L H E L Y SF ++ G Y SELF+YL+R+W++ +HCETG++P GVY V E++L +W + F LK+RL + + + +AAR +D D V S ++T+ +LG ++D+ L++ E+E + D KYYS + +LL +++ YL+E E
Sbjct: 4 VNFESEWREMQPPLASLVTGTPQTLTNEKWLKMYSGIYKICTNPGAPQAEMLFFRLRGLLVKHVEAILKELHEI-----HGEPEFLTHYCASFEAFATGTSYISELFRYLNRYWISYSHCETGQAPVPGVYPVTELALHIWHDIAFSKLKKRLVKAIIHIFHAARRDRSECFEDGDCVGSTIQTYFSLGLCRQDQMSLYREELEQPFLEDAAKYYSAKAVELLSRVTISEYLREAE 234
BLAST of mRNA_M-pyrifera_M_contig9115.21130.1 vs. uniprot
Match: A0A0P1AM02_PLAHL (Cullin family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM02_PLAHL) HSP 1 Score: 148 bits (373), Expect = 4.490e-37 Identity = 80/244 (32.79%), Postives = 140/244 (57.38%), Query Frame = 1
Query: 1 MTLLAPKAIDFEDTWVLLESSLITILQDLGQGFPNGLWMSLYTGVYKLCTKPMDPQHSKLYGRLKETLELYVAGVLKGLLAFDNVTSHSYIELLVRYRTSFHNYSVGMKYGSELFKYLDRHWVTTNHCETGRSPKIGVYFVHEMSLIVWKERVFEALKERLRRNTMRVVNAAREKNLTDLDDNDAVKSLLKTFETLGFEKRDRSHLFQTEMEDFLVTDTGKYYSRRGSDLLQHMSVPLYLKEVE 732
M+LL A++FE+ W ++ L +++ Q N W+ +Y+ +YK+CT P PQ L+ RL+ L +V +L+ L D E L Y TSF ++ G Y SELF+YL+R+W++ +HC+TG++P GVY V E+SL +W + F L++RL + + ++AR + D + S ++T+ +LG K+D+ L++ E+E + + ++Y+ + +LL M++ YL+E E
Sbjct: 1 MSLLKTSAVNFENEWRDMQLPLASLITGAPQTLTNDKWLKMYSAIYKICTNPGAPQAEMLFFRLRGLLVKHVEKLLRKLDTIDGDP-----EFLALYCTSFEAFTTGTSYISELFRYLNRYWISYSHCKTGQAPVPGVYPVTELSLHIWHDVAFVKLRKRLITAILHIYHSARLDKSDCFEYGDCIASTVQTYYSLGLCKQDQLSLYREELELPFLENVAEFYTAKALELLSRMTISEYLQETE 239
BLAST of mRNA_M-pyrifera_M_contig9115.21130.1 vs. uniprot
Match: F0WHK3_9STRA (Cullin family protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHK3_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.890e-35 Identity = 81/245 (33.06%), Postives = 137/245 (55.92%), Query Frame = 1
Query: 1 MTLLAPKAIDFEDTWVLLESSLITILQDLGQGFPNGLWMSLYTGVYKLCTKPMDPQHSKLYGRLKETLELYVAGVLKGLLAFDNVTSHS-YIELLVRYRTSFHNYSVGMKYGSELFKYLDRHWVTTNHCETGRSPKIGVYFVHEMSLIVWKERVFEALKERLRRNTMRVVNAAREKNLTDLDDNDAVKSLLKTFETLGFEKRDRSHLFQTEMEDFLVTDTGKYYSRRGSDLLQHMSVPLYLKEVE 732
M+LL P A+D E W +E SL +++ + Q + W+ +YTG+YK+CTKP PQ LY RL+ L ++ L F +++S S IE L Y T F+ + G Y SELF+YL+R W+ +H ETG++P GVY + E+++ +W + VF + ++ + ++ AR+ +D D + +++ +LG ++D +++ E+E + D YY+ +LL ++V YLK VE
Sbjct: 1 MSLLKPSAVDIESLWKNIEPSLQSLVSAVPQTLTHERWVEMYTGIYKVCTKPGAPQGELLYFRLRGLLVSHLE------LCFADISSISGEIEFLEHYCTQFNAFVTGTSYTSELFRYLNRFWIKYSHSETGQAPIPGVYAIDELAIHLWSDIVFTRVNSKVLYSVTQLFRYARDSKSISVDGADYITRAVESLYSLGSCQQDPLSVYRDELETPFLLDLSTYYAAMAGELLSKLAVAEYLKVVE 239
BLAST of mRNA_M-pyrifera_M_contig9115.21130.1 vs. uniprot
Match: A0A2D4BTB1_PYTIN (CULLIN_2 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTB1_PYTIN) HSP 1 Score: 142 bits (358), Expect = 5.070e-35 Identity = 85/272 (31.25%), Postives = 144/272 (52.94%), Query Frame = 1
Query: 1 MTLLAPKAIDFEDTWVLLESSLITILQDLGQGFPNGLWMSLYTGVYKLCTKPMDPQHSKLYGRLKETLELYVAGVLKGLLAFDNVTSHSYIELLVRYRTSFHNYSVGMKYGSELFKYLDRHWVTTNHCETGRSPKIGVYFVHE-----------MSLIVWKERVFEALKERLRRNTMRVVNAAREKNLTDLDDNDAVKSLLKTFETLGFEKRDRSHLFQTEME-DFL----------------VTDTGKYYSRRGSDLLQHMSVPLYLKEVE 732
M+LL +++FE W ++ SL++++ + Q N W+ +Y G+YK+CT P PQ L+ RL+ L ++V +L L V H +E L Y F +++ G + SELF+YL+R+W++ +HCE+G++P GVY V E ++L +W + F L++++ + M V R DD D + SL++T+ LG ++D L++ ++E FL + DT +YYS DLL +++ YL+EVE
Sbjct: 1 MSLLKTSSVNFEKLWEDIQPSLLSLVSGVPQSMTNERWLEMYNGIYKICTNPQVPQAELLFFRLRSLLVIHVERILDDL---RRVPGH--VEFLQAYCCRFRSFTTGTSFISELFRYLNRYWISYSHCESGQAPVPGVYPVTEYVTNHYYDLCQLALHIWHDIAFLKLRKKVIASVMHVFRIVRNGRSEVFDDGDLIASLVETYFALGAIRKDPMALYREDLEAPFLEVSHVVFQNQAKMGVYLQDTAQYYSELARDLLSKVTIAEYLREVE 267
BLAST of mRNA_M-pyrifera_M_contig9115.21130.1 vs. uniprot
Match: A0A6H5JVF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVF5_9PHAE) HSP 1 Score: 124 bits (312), Expect = 3.090e-29 Identity = 62/75 (82.67%), Postives = 65/75 (86.67%), Query Frame = 1
Query: 1 MTLLAPKAIDFEDTWVLLESSLITILQDLGQGFPNGLWMSLYTGVYKLCTKPMDPQHSKLYGRLKETLELYVAGV 225
MTLLAP+ IDF+DTWVLLESSLITILQD GQGFPN LW+SLYTGVYKLCTKPMDPQHSKLY RLK VAGV
Sbjct: 430 MTLLAPEPIDFDDTWVLLESSLITILQDPGQGFPNDLWISLYTGVYKLCTKPMDPQHSKLYARLK------VAGV 498
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 449.1 |
Seed ortholog evalue | 1.3e-123 |
Seed eggNOG ortholog | 2880.D7FUY8 |
Preferred name | CUL1 |
KEGG ko | ko:K03347 |
KEGG Pathway | ko04110,ko04111,ko04114,ko04120,ko04141,ko04310,ko04340,ko04341,ko04350,ko04710,ko05168,ko05200,map04110,map04111,map04114,map04120,map04141,map04310,map04340,map04341,map04350,map04710,map05168,map05200 |
KEGG Module | M00379,M00380,M00381,M00382,M00387,M00407,M00411 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000003,GO:0000082,GO:0000086,GO:0000151,GO:0000152,GO:0000165,GO:0000209,GO:0000278,GO:0002119,GO:0002164,GO:0002252,GO:0002376,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006275,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006513,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006915,GO:0006935,GO:0006950,GO:0006952,GO:0007049,GO:0007050,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007346,GO:0007399,GO:0007568,GO:0008150,GO:0008152,GO:0008156,GO:0008219,GO:0008283,GO:0008285,GO:0008340,GO:0008361,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009615,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010259,GO:0010265,GO:0010389,GO:0010498,GO:0010556,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010639,GO:0010646,GO:0010648,GO:0010720,GO:0010824,GO:0010826,GO:0010941,GO:0010942,GO:0010948,GO:0010972,GO:0012501,GO:0014041,GO:0014042,GO:0014066,GO:0014067,GO:0016043,GO:0016055,GO:0016310,GO:0016567,GO:0016740,GO:0019005,GO:0019219,GO:0019221,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0019941,GO:0022008,GO:0022402,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0023057,GO:0030003,GO:0030111,GO:0030154,GO:0030162,GO:0030163,GO:0030174,GO:0030178,GO:0030587,GO:0030674,GO:0031098,GO:0031146,GO:0031156,GO:0031285,GO:0031286,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031461,GO:0031625,GO:0031647,GO:0031667,GO:0031974,GO:0031981,GO:0032006,GO:0032007,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032268,GO:0032270,GO:0032297,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032535,GO:0032886,GO:0032991,GO:0033043,GO:0033262,GO:0033554,GO:0034097,GO:0035556,GO:0036211,GO:0038061,GO:0040011,GO:0042127,GO:0042176,GO:0042221,GO:0042330,GO:0042592,GO:0042594,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043161,GO:0043170,GO:0043207,GO:0043224,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043516,GO:0043518,GO:0043565,GO:0043632,GO:0043687,GO:0043900,GO:0043901,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044839,GO:0044843,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045666,GO:0045732,GO:0045786,GO:0045862,GO:0045930,GO:0045934,GO:0046605,GO:0046606,GO:0046626,GO:0046627,GO:0046916,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051052,GO:0051053,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051403,GO:0051493,GO:0051494,GO:0051603,GO:0051607,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051960,GO:0051962,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0060090,GO:0060255,GO:0060284,GO:0060548,GO:0060828,GO:0061136,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070498,GO:0070507,GO:0070555,GO:0070647,GO:0070887,GO:0071310,GO:0071345,GO:0071347,GO:0071704,GO:0071840,GO:0075260,GO:0075262,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090090,GO:0090329,GO:0090702,GO:0097159,GO:0097190,GO:0097193,GO:0098542,GO:0098771,GO:0099120,GO:0140096,GO:0198738,GO:1900076,GO:1900077,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901796,GO:1901797,GO:1901800,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902494,GO:1902531,GO:1902532,GO:1902576,GO:1902749,GO:1902750,GO:1903047,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903429,GO:1903431,GO:1903463,GO:1903464,GO:1903466,GO:1903467,GO:1904799,GO:1904801,GO:1905114,GO:1990234,GO:1990452,GO:1990837,GO:2000026,GO:2000058,GO:2000060,GO:2000104,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2001020,GO:2001021 |
EggNOG free text desc. | ubiquitin protein ligase binding |
EggNOG OGs | COG5647@1,KOG2166@2759 |
Ec32 ortholog description | Cullin repeat-like-containing domain |
Ec32 ortholog | Ec-01_008690.1 |
COG Functional cat. | O |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko04121 |
Exons | 5 |
Model size | 744 |
Cds size | 744 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816824.0459983-CDS-M-pyrifera_M_contig9115:4735..4930 | 1622816824.0459983-CDS-M-pyrifera_M_contig9115:4735..4930 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9115 4736..4930 + |
1692278199.8069627-CDS-M-pyrifera_M_contig9115:4735..4930 | 1692278199.8069627-CDS-M-pyrifera_M_contig9115:4735..4930 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9115 4736..4930 + |
1622816824.056878-CDS-M-pyrifera_M_contig9115:7440..7656 | 1622816824.056878-CDS-M-pyrifera_M_contig9115:7440..7656 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9115 7441..7656 + |
1692278199.8311388-CDS-M-pyrifera_M_contig9115:7440..7656 | 1692278199.8311388-CDS-M-pyrifera_M_contig9115:7440..7656 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9115 7441..7656 + |
1622816824.068735-CDS-M-pyrifera_M_contig9115:9301..9465 | 1622816824.068735-CDS-M-pyrifera_M_contig9115:9301..9465 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9115 9302..9465 + |
1692278199.8427668-CDS-M-pyrifera_M_contig9115:9301..9465 | 1692278199.8427668-CDS-M-pyrifera_M_contig9115:9301..9465 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9115 9302..9465 + |
1622816824.0815492-CDS-M-pyrifera_M_contig9115:10497..10593 | 1622816824.0815492-CDS-M-pyrifera_M_contig9115:10497..10593 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9115 10498..10593 + |
1692278199.8532815-CDS-M-pyrifera_M_contig9115:10497..10593 | 1692278199.8532815-CDS-M-pyrifera_M_contig9115:10497..10593 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9115 10498..10593 + |
1622816824.0922124-CDS-M-pyrifera_M_contig9115:11049..11122 | 1622816824.0922124-CDS-M-pyrifera_M_contig9115:11049..11122 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9115 11050..11122 + |
1692278199.8686554-CDS-M-pyrifera_M_contig9115:11049..11122 | 1692278199.8686554-CDS-M-pyrifera_M_contig9115:11049..11122 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9115 11050..11122 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9115.21130.1 >prot_M-pyrifera_M_contig9115.21130.1 ID=prot_M-pyrifera_M_contig9115.21130.1|Name=mRNA_M-pyrifera_M_contig9115.21130.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp
MTLLAPKAIDFEDTWVLLESSLITILQDLGQGFPNGLWMSLYTGVYKLCT KPMDPQHSKLYGRLKETLELYVAGVLKGLLAFDNVTSHSYIELLVRYRTS FHNYSVGMKYGSELFKYLDRHWVTTNHCETGRSPKIGVYFVHEMSLIVWK ERVFEALKERLRRNTMRVVNAAREKNLTDLDDNDAVKSLLKTFETLGFEK RDRSHLFQTEMEDFLVTDTGKYYSRRGSDLLQHMSVPLYLKEVERYLQ back to topmRNA from alignment at M-pyrifera_M_contig9115:4736..11122+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig9115.21130.1 ID=mRNA_M-pyrifera_M_contig9115.21130.1|Name=mRNA_M-pyrifera_M_contig9115.21130.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6387bp|location=Sequence derived from alignment at M-pyrifera_M_contig9115:4736..11122+ (Macrocystis pyrifera P11B4 male) ATGACGCTCCTTGCGCCTAAAGCAATAGACTTTGAGGACACATGGGTTCT
CCTGGAGTCGTCCCTGATCACGATTCTTCAAGATCTGGGCCAGGGCTTCC
CCAATGGCCTGTGGATGTCTCTGTACACTGGCGTGTACAAGCTGTGCACC
AAGCCGATGGATCCCCAGCACAGCAAGCTTTACGGTAGGCTCAAGGTGCG
TCGTGGTGGGTCCTGTGGTTTCTCCAAAACTGGTATTTTTTTCATTTTTG
ATTCGCACGTTCAGCGGATGAGACAAAACGAAAAAGTGTGGAGAATTTCA
GCGTTCCGAGACGTCTTCAACGTAGTTGGTGGTGGCACTCGGACGTATCG
TTTCCTGCGGGTATACGTACGATACAAGTGCTGTAGTGGGCAGCTGAGAT
CCGATCACGCGCTTCATGTGAGAGTATCACGTACCACAGCAGCAGCAGCA
GCTGGTCGTATTCATACTCATATTAATAGCGCAATCTCCACTCCCGACTC
CGATGGGGATCTACAAACAGCAGTACGAAGGTAGTCTCAGTACTACAGAG
TAGAATCTCAGTGTCGCGTCAACTTCCAAATTATTTTAACCAGATTTAAC
TGATCTTTTTCCGTTGTCACTACGTACGTGCGTATTGGTGGACAAGACAT
ACGTGAGTACTTGCATATACGAGGTACTGCTGTAAGTACGAATGCAAGCG
GGATCTATTACGAAACAAACCAACATAACACAACAACATAGCAACAGCAA
GCAGTCGACATAAAATCAACTATTTATACTACTAATATAATAGTAGCATT
AACCGAGGGTTCTATTAATACCTCGCTGTACACATCTATCTATCTATGAC
CTGCGGTATGAGGCAGAAGAATTGATTTATTTTTACCCTCTGGTACTAAC
TGTACATGATTGGTATAATTACCTGGTACATCCTGCAAGACTCCAATCAT
TTGTACCCTACAGTGACCCACCCGTGCGCGACCCATACTCCCATACTCGT
ACCCGTGAAGAGGTAGTACTGCTGCTGTAGACGATCCGTTCCTTGCGTGA
ACCATCAACATTTCATGCTTATGAACTCTGCAGGTCTACAATCTGAACCG
CTGGCCTATATCTTTGACAAGGAATTACATACTAGTATAGAATACGCGCG
TTCGGTTTATTACGATACTCGTAAAATTCGGTAAAAATGGAATAAAGACG
AGACGTATTACGCACCTTGCAAAGTTGAGTATCAACTATTTAATCAGTCG
AACTCACAGCTGACGTATTTCAAAATTTTATAAAATCTAATACGTACTAC
AAGTTGTAGTAATTAATATTCATTTCTGTGCCGTGGACATCCCGACGACT
CTTCTTATCCCTTTGCAGATGGTAAGGGCATGCTCACGAGCTCTGCATGT
CTAGTGATAGCTGCACTTTGCACAGTGTATTCTCACTGGTCGCTGCATCG
TGGATACCGGCATGACAACGATTCACCGCCGTACGTGTGCAGAGCCTGTG
TCTTCTTCGAACGAAGTCACCAGATCACCAGCACCACTGAACATGAAGGC
GAATAAGGAGAGCGCTGAAATGCTTCAAGCTGCAGCTACGAAGCTGGTAC
CGCCGCGGCTACGCACGAGTTAAAATAACTAGTGTTGCTAATAGGAGTAT
TGCTGCCACGCCTGTTCCCGCATCGATCGTTATCCTTGGCGCGGCAACGA
CCACATTTTGTTGTTCGTATGTTCACTCAACGGACGATGTTGATGGCAGA
TTTCGCCTCTGTCGATACCGCCTGCAGCACAAGCTGTCACCACGCCCGCC
CGGGTTGCAAGCGCAGTTGCTGTCGTTTTCTACATTATACTCGTAGCACG
CCGTGACTTCTTATACCGTTGGCCCACCCGCGCCGGGGCTAACCAGCGTT
TGCCGAGGTGTGGCGTGCGTGCCGCCTGTTCCCGGCCGCTCACCCGTTTT
TCTCGTTGGGCTATCGGTCACCTGCGCCCGTGCTTTGCGACGCTCCATGC
CGTACATGCTGCTACACCAAGCCGCCTAGCGCTGTTATAGAGCTACGCGT
ACCGTCTGTACGTTCTGGTTTGTCTTTGCCGAAGAGCGGTTAGAGGCGTC
GGCTTTGTTAGTCGGCATGCACTGCTGTCTGCGTTGCAGCACGTGCCCTA
CTCGAGCGCCTTGATCTGCTCAGCGGCTGATGGCGACAACCATGAGCTGG
GTGTCTTCCTTCCCGCGAACGAAACTCACGCGGCACAAAGCGCTGACAAG
CGTGTGCCAAATGTGTGCAACCACGAAACTTCGCATATGGCTGCTCCTGT
GGACCACAAAACCGACAGCACGAGAGAACGGTACTCGCATGTAAAATATC
AGACTGCTGCGGTAAATATGACGAGGTTTCGGAGGAGCCGCAAGCCGCCT
CCATTTCTGCCCATCCGTCTATCGATACCTTGTGACACAGTTTCTTGTTT
CGCTTTGGTGGTTCCCCGTCTGCTGTGAACGGCATTGTAGCAAGTCCCCC
CCTTCCCTCTCCCTGTATCTAAGTGCAATGCAAAGTCTGGGCATATTCTA
CACGACGATACGCTTTGTCCTCTCGTGCAGTATGCGTATTGAAAATAGCA
CACACCCGTCATCCTCCTCTTCCTCAACCCCCCCGTCCCCCCCCCGTCCC
CCTCCTCCTCCTTCTCCTCCTCCTCCTTCCGCCACTGCTCTGGAAACCCT
TCCAGGAGACTCTGGAGCTCTACGTGGCAGGCGTTTTGAAGGGGCTGCTG
GCGTTCGACAACGTCACCTCGCACTCCTATATCGAGCTGTTGGTGAGGTA
CCGCACGTCGTTCCACAACTACTCCGTCGGCATGAAGTACGGCTCGGAGC
TGTTCAAGTACCTCGATCGCCACTGGGTAACGACCAACCACTGCGAAACG
GGACGGTCGCCCAAGATTGGGGTAAGCGTATATACTGTAGAGTGTCGCGC
GCTCGGGGTGTTGTGCGTACAATCGTGTTTTTTTAATAATCTGTTTTGGC
TTTTTTTTTTGTTTGCTTTGCTGCTGACGTGTGTGAAAGAGGTTGTATTA
GCTGCGAGGGGATAAGGTGTGCTTGCCGAGGGTATGGGGGTAGGATTTTA
CCCGCCCGCCGTTTGTGTATCATATGATACTAGCAATGCCGCGATGGTAA
CGGCTGCTTTCAAAATACGCGTTCGAATTATCTCAGACAAGTTTGTGGTG
CGAGTGGATATACACCGAGGGAGAAAAAATTGACAGGAGAGGGTGGAGAG
GGTGGTGCACACTACATACACATGCGCAGCCGAACGTCGAAACAGAAGGG
GATTGTACACGTATTTGTAGTCCCCAGTCTGAGGGTGTTGCGGGAAAAGT
CGGCATTGCTTCTGCAAATGCGGGAAGCCGGGTGCACAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAACAGCAGTAGTAGTAGAAGCAGCAGCAACAGC
AGTAGCAGCAGCAGTAGCAGCAGCGACGGCTACGGCCTCGGCAGCAGCAA
AGCAACGCGGCTGCGTGCCTCAACCTTCTCGCCACTGCCTGTGTCGGCGC
GCCACGGCTTTCGCTGAGGCTCTTCTCTCTTCTTTCCGGACCGAGTTCCC
TCCCTGGTGCGACGAACCGGACGGTTGGCGAGATTGCGCGAGAACCGAAC
CCGCTTGTAGCAACCAAATCCCCGCTGTTTGTTCGAGGCTGCGGAAACTT
TTTGCTTTGGCCGCAGCGGTAGAACAACTTGAGTACCGTGCCGCAGGGTG
TGTGTGTGCTGCTTTCGCCGCTTAGACGGACGTGTGGGCGGCGACCCGAC
AGACGTGCGCCTGGCGCCCCGGCGTTTTTGCTGAAGTACAGGGCTCTGGA
GCGCGTTGAGCGCGTCGTAGCGCCGACCTTATATTTGCTCGTGTTACACA
TGTTGTGCGGTATAGTAGGGAAAGCGTTAAGGGCCCGTCGAGAAGCTGCT
AACAGCGCCATGGTTTTGGTGTCGTTGTCAGCGTGGGGTTTCAGTTTTAA
TCCGGTTCAGTGTTTTTATTGGCTTAGTTTCGTCTGCCACGAAATGTACA
AGCCCCCACCCAAAGCTCCGTCATCTGCCGGACGTGACGTTTGGTCAAGA
AATTCATTCCGTTCGCTACCCCTCCTCCTCTGGCCATACGACTAGGGCGA
TTCATGATATCGAGTACCCCCCCCCTCCCCCCGCTCTCTCTCCGACCCGC
CCGTCTCTGGGCCCGATCTACCGCTTTTTTTTTCCCTTGAAAACTTACTT
CTTGAGTTACCGGTGCTTGGCTTTGCGTCCCCCCTCCCTAGCTCTTACAG
TCGACGCCCAAATCCAACAGCTACTACTCGTAGTGGTGCTGCTTTTCTTA
TAAATCGCATGACGATATGTTTACTGCGCACACGTGCCGCCCCACCGCCA
AAAACTTGCGGCCCGAACCGATAGGTGCCGTGAGCGCACGATCCTCCACC
CGCTCATCTTTGTGGTATATTCCCAACATGTCCAACCCCGCCTATGTCAG
TCTTTCTTTACCCCCCCCGCCCCTCCCCCCCCCCCCTCTCTCTCTTTTGT
CGGTGAAATATTGCAGGTCTACTTTGTGCACGAGATGTCGCTGATCGTAT
GGAAAGAGCGTGTGTTCGAGGCCCTGAAGGAACGCCTGCGGCGCAACACG
ATGAGGGTCGTCAACGCCGCGAGGGAGAAGAATCTGACCGACCTCGATGA
CAACGACGCCGTCAAGTCTCTCCTCAAGACGTGAGACCCGGCACTAAAGA
GAGAGGGAAGGGTAGAAAACGAAATCACCTAGTTTTTTTTTTCGTACCGG
GAATATTCAAGGCAGTCCGTTTGTTTTTTTTTCTTCTTTTTTCCTCCCAA
TTTTTTCCTGCTATGCTCATTGTGTGTATTTGTGTGTTTTAATCTTATTC
TCCCGTCCGTGTACTCTTGTTCTTGGTGTTCTCTCTCGCCGGGGAGGGTG
CCGGGGATCGTCTGACCGATCGGTTCTGTCCACAGCGCCCGACGCGGTTA
ATTTTTACGGATACCATTTTTGCCCACCGCACTTGACTGATTTGCGGCAG
CGTCCCGACGGCAAAAACAAGCGGCTTAGAGCTGCGTACGTACGCCATCA
TGTTTTTCGTTGGACACTGCTTATATTTCTACGTGGTTTTGCAGTTTGGG
ATACACCACTGGGTCCTCTACCCCCTCCCTGTCGCAAGCCCTCTCTTCCT
ACCCCCGCCCTCTCCCCCCCCCCTACCCCCGGCCCACACCNNNNNNNNNN
TTTTTGGGCGCTCGCTTTTTTTTTCTTGTTGTTTTGTGTTTTTGGGCCAC
CCCCCGGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCC
CCAGGGCCTTTGTCATGCGGCATCTGATGTAAGCTGATGCGCCGTCCGTG
TTTAAAAAGAGCACCTGTCAGGCGGGGTACAAATGCGCATCGGTGTCGAA
GGCGACCTTGCCGTCTTGTCTGGGGCTCGCGCACCCCCCCACTTGCGTCT
GTCTGTCTCTGTTTCAGCAGAGCTCGCCACTTTATTCTACACTTCGGTTG
ACTGACGCCCAATGCGAATGAGACGGGAAGACCATGGTTGGTTGGGTTGT
AGGGCTAGGGTTAGGGTTAGTTGTAGTCGTCTCGTGCAACAGTCAACCTC
AGCCGTAGCGTGGAACAAGCGGCAGTCAGCCCCTGTTCTGTTTTCGCGCC
CCGCCGCGCCTGAAGAAAACACGCCCACGGCGGTGTCCAACTCCGTGCCT
TGATCAATGCAGGTTCGAGACGCTGGGCTTCGAAAAGCGCGACCGTAGCC
ACCTCTTCCAGACCGAGATGGAAGACTTCCTGGTGACGGATACGGGGAAG
TACTACAGGTGAGATACCGAATGTAGCAGTTATTTTTTTACAAACATCCT
GCTTTTCCATTTCCCCCTTCTTCCTTTTTTAGTACCGCCCGTGGCTTGAA
TGTCGTGCTGGGTTGCGAGTTTCGTTTTCAACCAAGGGTCGAGGGCTAGT
ATATACCCGAAGGCGGAGGAGTATTGGGGTGGGGGGTGGGGTGGGATTCG
AACACGAGTCCTGACCCTCGCCGCTCCCCGAGCGAATAAGTACGTACTCG
CAGGCCTTTTTGAGGCGGCGAGTGCTATCGTGTGGGCATAGCGGTCACGC
GGTGTGTGACGCGCGGGACAAAGTACCCCCGAAAGACGCGCGAGTCCGCC
GCACTCGATCCGAGCATCCGCGCGCTCTTAATCCTAACACTCGCTCCCTA
TTTTGTGTCCCGAACGCTCTGTGCCTTGCCCCTTCCCTTGACATGTCATG
TTGTGGCTTCTCAGTCGCCGCGGGAGCGACCTCCTGCAGCACATGTCGGT
CCCGCTCTATCTCAAGGAGGTGGAGCGGTACTTGCAG back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig9115:4736..11122+ >mRNA_M-pyrifera_M_contig9115.21130.1 ID=mRNA_M-pyrifera_M_contig9115.21130.1|Name=mRNA_M-pyrifera_M_contig9115.21130.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig9115:4736..11122+ (Macrocystis pyrifera P11B4 male) ATGACGCTCCTTGCGCCTAAAGCAATAGACTTTGAGGACACATGGGTTCT CCTGGAGTCGTCCCTGATCACGATTCTTCAAGATCTGGGCCAGGGCTTCC CCAATGGCCTGTGGATGTCTCTGTACACTGGCGTGTACAAGCTGTGCACC AAGCCGATGGATCCCCAGCACAGCAAGCTTTACGGTAGGCTCAAGATGAC GCTCCTTGCGCCTAAAGCAATAGACTTTGAGGACACATGGGTTCTCCTGG AGTCGTCCCTGATCACGATTCTTCAAGATCTGGGCCAGGGCTTCCCCAAT GGCCTGTGGATGTCTCTGTACACTGGCGTGTACAAGCTGTGCACCAAGCC GATGGATCCCCAGCACAGCAAGCTTTACGGTAGGCTCAAGGAGACTCTGG AGCTCTACGTGGCAGGCGTTTTGAAGGGGCTGCTGGCGTTCGACAACGTC ACCTCGCACTCCTATATCGAGCTGTTGGTGAGGTACCGCACGTCGTTCCA CAACTACTCCGTCGGCATGAAGTACGGCTCGGAGCTGTTCAAGTACCTCG ATCGCCACTGGGTAACGACCAACCACTGCGAAACGGGACGGTCGCCCAAG ATTGGGGAGACTCTGGAGCTCTACGTGGCAGGCGTTTTGAAGGGGCTGCT GGCGTTCGACAACGTCACCTCGCACTCCTATATCGAGCTGTTGGTGAGGT ACCGCACGTCGTTCCACAACTACTCCGTCGGCATGAAGTACGGCTCGGAG CTGTTCAAGTACCTCGATCGCCACTGGGTAACGACCAACCACTGCGAAAC GGGACGGTCGCCCAAGATTGGGGTCTACTTTGTGCACGAGATGTCGCTGA TCGTATGGAAAGAGCGTGTGTTCGAGGCCCTGAAGGAACGCCTGCGGCGC AACACGATGAGGGTCGTCAACGCCGCGAGGGAGAAGAATCTGACCGACCT CGATGACAACGACGCCGTCAAGTCTCTCCTCAAGACGTCTACTTTGTGCA CGAGATGTCGCTGATCGTATGGAAAGAGCGTGTGTTCGAGGCCCTGAAGG AACGCCTGCGGCGCAACACGATGAGGGTCGTCAACGCCGCGAGGGAGAAG AATCTGACCGACCTCGATGACAACGACGCCGTCAAGTCTCTCCTCAAGAC GTTCGAGACGCTGGGCTTCGAAAAGCGCGACCGTAGCCACCTCTTCCAGA CCGAGATGGAAGACTTCCTGGTGACGGATACGGGGAAGTACTACAGGTTC GAGACGCTGGGCTTCGAAAAGCGCGACCGTAGCCACCTCTTCCAGACCGA GATGGAAGACTTCCTGGTGACGGATACGGGGAAGTACTACAGTCGCCGCG GGAGCGACCTCCTGCAGCACATGTCGGTCCCGCTCTATCTCAAGGAGGTG GAGCGGTACTTGCAGTCGCCGCGGGAGCGACCTCCTGCAGCACATGTCGG TCCCGCTCTATCTCAAGGAGGTGGAGCGGTACTTGCAG back to top
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