mRNA_M-pyrifera_M_contig91135.21129.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91135.21129.1
Unique NamemRNA_M-pyrifera_M_contig91135.21129.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91135.21129.1 vs. uniprot
Match: A0A448Z4E5_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4E5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.330e-15
Identity = 59/160 (36.88%), Postives = 77/160 (48.12%), Query Frame = 1
Query:   28 LRG--EDEVETWAEMVGAQFSSKGGNP--RRFYHKYLSDPSSRHDSVFVAIYPPTGAIAASVRVQYPNFSQVFDDVSRPPSVSAQVRVFDRVIRDGKGRR---VRMAGIGEVCTAPDHRKRGLAKRLLHIALEWSKRAGMEISVLHAAPGVQGLYASLGF 486
            LRG  E+EV  W+E   + FS K   P    FY  Y +DPS R  S  + +    G I AS R+                        F R I  GKGR    +R  GIGEVCTA +HR+RG++  LL   +   +  G+E+S LHAAP    LY S+G+
Sbjct:   38 LRGLNEEEVRPWSEFCASVFSYKANPPPAEYFYRHYANDPS-RGSSKLIRVALYNGNIVASCRI------------------------FLRTISSGKGRGARGLRAGGIGEVCTAVEHRRRGISTALLKSTIPIMRERGLEVSSLHAAPVFFPLYESMGY 172          
BLAST of mRNA_M-pyrifera_M_contig91135.21129.1 vs. uniprot
Match: A0A7S4MSD4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSD4_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.730e-14
Identity = 51/160 (31.87%), Postives = 79/160 (49.38%), Query Frame = 1
Query:   13 YDFRPLRGED-EVETWAEMVGAQFSSKGGNPRRFYHK--YLSDPSSRHDSVFVAIYPPTGAIAASVRVQYPNFSQVFDDVSRPPSVSAQVRVFDRVIRDGKGRRVRMAGIGEVCTAPDHRKRGLAKRLLHIALEWSKRAGMEISVLHAAPGVQGLYASLG 483
            Y  R LR ++ ++  WA+     F +K   P + Y K  + +DP  R D+  + I    G                   V     +++ +RVF R I +G+G  +   GIGEVCT P+HR+RGL+K LL  ++ + +  G+E S+LHAA  V  +Y   G
Sbjct:   17 YTLRSLRDDETDLSRWADFCAFCFGNKSDPPTKNYFKRHFFNDP--RRDASAIHIIEFLG-------------------VGGKIEIASSMRVFLRTISNGRGGTIEAGGIGEVCTHPEHRRRGLSKMLLTKSISFMENCGLETSLLHAAAAVTPVYKKNG 155          
BLAST of mRNA_M-pyrifera_M_contig91135.21129.1 vs. uniprot
Match: B8CA27_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA27_THAPS)

HSP 1 Score: 68.9 bits (167), Expect = 1.110e-10
Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 1
Query:   13 YDFRPLRGEDEVETWAEMVGAQFSSKGGNPRRFY--HKYLSDPSSRHDSVFVAIYPPTGAIAASVRVQYPNFSQVFDDVSRPPSVSAQVRVFDRVIR--------DGKGRRVRMAGIGEVCTAPDHRKRGLAKRLLHIALEWSKRAGMEISVLHAAPGVQGLYASLG 483
            Y  R L   ++++ W     + FS K   P   Y    + +DP      V V +Y PT   + SV           ++  +   + A VR+F R +          G    +   GIGEVCT+P+H++RGL+K LL  AL    ++ M  S LHA+P  + +Y+ +G
Sbjct:   24 YHLRGLSNTNDIDRWTTFCSSIFSYKPNPPPPSYFARHFHNDPKKDASLVRVLVYCPTSTGSGSVDCD--------EEEKKNGEIVASVRIFRRTLSLGTCGDNCGGDSSVIEAGGIGEVCTSPNHQRRGLSKILLKDALS-IMQSTMTCSFLHASPDFRTVYSKVG 181          
BLAST of mRNA_M-pyrifera_M_contig91135.21129.1 vs. uniprot
Match: A0A6B2LAW5_9EUKA (N-acetyltransferase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LAW5_9EUKA)

HSP 1 Score: 64.3 bits (155), Expect = 3.600e-9
Identity = 49/151 (32.45%), Postives = 72/151 (47.68%), Query Frame = 1
Query:   37 EDEVETWAEMVGAQFSSKGGNPRRFYHKYLSDPSSRHDSVFVAIYPPTGAIAASVRVQYPNFSQVFDDVSRPPSVSAQVRVFDR-VIRDGKGRRVRMAGIGEVCTAPDHRKRGLAKRLLHIALEWSKRAGMEISVLHAAPGVQGLYASLGF 486
            EDE+E+W + VG  FS K  N   F   + +DP    + +FV                           +R   +   +RVF R V   GK R+  M G+GEV T  + R+RG+A +LL +AL + +  GMEIS+L    G Q +Y  +G+
Sbjct:    3 EDELESWFDFVGLVFS-KAQNRSYFVRHWQADPHRNINGIFVC--------------------------TRNSEIVGTLRVFHREVYIAGKNRK--MGGLGEVSTHKEFRRRGIASKLLKMALCYMEENGMEISMLS---GDQSIYTGVGY 121          
BLAST of mRNA_M-pyrifera_M_contig91135.21129.1 vs. uniprot
Match: A0A7S2A9K2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9K2_TRICV)

HSP 1 Score: 59.3 bits (142), Expect = 1.790e-7
Identity = 26/57 (45.61%), Postives = 41/57 (71.93%), Query Frame = 1
Query:  301 GKGRRVRMAGIGEVCTAPDHRKRGLAKRLLHIALEWSKRAGMEISVLHAAPGVQGLY 471
            G+G  +  AG+GEVCT+P HR+RGL++ L+  A+   +  G+++S+LHAAP + G Y
Sbjct:    5 GRGGTLEAAGVGEVCTSPTHRRRGLSRALMKDAIGAMEGIGVDVSLLHAAPELAGFY 61          
BLAST of mRNA_M-pyrifera_M_contig91135.21129.1 vs. uniprot
Match: A0A7S2P0T9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P0T9_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.660e-7
Identity = 50/174 (28.74%), Postives = 80/174 (45.98%), Query Frame = 1
Query:   13 YDFRPLRGED-EVETWAEMVGAQFSSKGGNP--RRFYHKYLSDPSSRHDSVFVAIYPPTGAIAASVRVQYPNFSQVFDDVSRPPS--VSAQVRVFDRVIRDGK----GRRVRMAGIGEVCTAPDHRKRGLAKRLLHIALEWSKRA--------GMEISVLHAAPGVQGLYASLG 483
            Y  R LR +  +++ W +   + F+ K   P    F   + +DP  R D             A+ VRV     +   +D ++  +  + + VR+F R +  G     G  +   GIGEVCT+PDH++RGL+K LL  A+     +        GM  S+LHA P  + +Y  +G
Sbjct:   22 YHLRGLRQQQHDIQRWTQFCASVFAYKPSPPPPEYFARHFYNDP--RCD-------------ASLVRVMIHCLNAADNDEAQKMTGEIVSSVRIFRRTLSTGGSNSGGATIEAGGIGEVCTSPDHQRRGLSKILLKDAINIMSTSCDGVGDSGGMSCSLLHANPEFRPVYNKVG 180          
BLAST of mRNA_M-pyrifera_M_contig91135.21129.1 vs. uniprot
Match: A0A0X1KNC6_9EURY (N-acetyltransferase domain-containing protein n=1 Tax=Thermococcus guaymasensis DSM 11113 TaxID=1432656 RepID=A0A0X1KNC6_9EURY)

HSP 1 Score: 56.2 bits (134), Expect = 2.530e-6
Identity = 37/78 (47.44%), Postives = 46/78 (58.97%), Query Frame = 1
Query:  259 VSAQVRVFDRVIRDGKGRRVRMAGIGEVCTAPDHRKRGLAKRLLHIALEWSKRAGMEISVLHAAPG--VQGLYASLGF 486
            ++A V V DR I+  +G   + AGI  VCT+P+ R RGLAKRLL  AL  S+  G E+S L A  G     LY  LGF
Sbjct:   58 LAAMVHVIDREIKV-RGEFFKTAGIANVCTSPEFRGRGLAKRLLEHALIDSRERGYELSALLAGYGEIAHALYRKLGF 134          
BLAST of mRNA_M-pyrifera_M_contig91135.21129.1 vs. uniprot
Match: A0A849ZIL5_9BACT (GNAT family N-acetyltransferase n=1 Tax=Candidatus Sumerlaeia bacterium TaxID=2715255 RepID=A0A849ZIL5_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 8.890e-6
Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 1
Query:  259 VSAQVRVFDRVIRDGKGRRVRMAGIGEVCTAPDHRKRGLAKRLLHIALEWSKRAGMEISVLHAAPGVQGLYASLGF 486
            +++ +R+F R IR  + R +R+ GIG V TAP+HR RGLA  L+H  +E   + G EI++L    GV  +Y   GF
Sbjct:   59 IASTLRIFAREIR-WQARWLRLGGIGNVATAPEHRGRGLANLLMHHTIERMAQRGFEIALLFT--GVPRVYEKSGF 131          
BLAST of mRNA_M-pyrifera_M_contig91135.21129.1 vs. uniprot
Match: A0A507FFF9_9FUNG (N-acetyltransferase domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FFF9_9FUNG)

HSP 1 Score: 54.7 bits (130), Expect = 1.040e-5
Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 1
Query:   40 DEVETWAEMVGAQFSS------KGGNPRRFY-HKYLSDPSSRHDSVFVAIYPPTGAIAASVRVQYPNFSQVFDDVSRPPSVSAQVRVFDRVIRDGK-GRRVRMAGIGEVCTAPDHRKRGLAKRLLHIALEWSKRAGMEISVLHAAPGVQGLYASLGF 486
            DEV    + + A F +      + G PR F+ H +  D        F A   P+G + ASVRV Y    ++  + S      A     ++ +  G     + + GIG+V T  +HR +GLA  LLH+A ++  R+   ++VLHA P V  +Y+  G+
Sbjct:   15 DEVPLLLDHLDAVFGAVNSVTGRRGAPRGFFEHHWDCDDQRDVRGCFGAFDEPSGRLVASVRV-YSRAMRLHSETS-----IALASATEQSLETGPCASTIPIGGIGDVATRSEHRGKGLAHALLHLADDYM-RSQFPLAVLHAGPAVVPVYSKQGW 164          
BLAST of mRNA_M-pyrifera_M_contig91135.21129.1 vs. uniprot
Match: A0A7S7NSW1_9BACT (GNAT family N-acetyltransferase n=1 Tax=Paludibaculum fermentans TaxID=1473598 RepID=A0A7S7NSW1_9BACT)

HSP 1 Score: 51.2 bits (121), Expect = 4.680e-5
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 1
Query:  313 RVRMAGIGEVCTAPDHRKRGLAKRLLHIALEWSKRAGMEISVLHAAPGVQGLYASLGF 486
            R   A I  V T P HR++GLA++L+ +A++W + AG  I  LHA+   + LY SLGF
Sbjct:   86 RAERAFIINVYTEPQHRRQGLARKLMGVAVDWCREAGFAIVSLHASNEGRPLYESLGF 143          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91135.21129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A448Z4E5_9STRA2.330e-1536.88N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S4MSD4_9STRA4.730e-1431.88Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B8CA27_THAPS1.110e-1029.34Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A6B2LAW5_9EUKA3.600e-932.45N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S2A9K2_TRICV1.790e-745.61Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2P0T9_9STRA4.660e-728.74Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A0X1KNC6_9EURY2.530e-647.44N-acetyltransferase domain-containing protein n=1 ... [more]
A0A849ZIL5_9BACT8.890e-642.11GNAT family N-acetyltransferase n=1 Tax=Candidatus... [more]
A0A507FFF9_9FUNG1.040e-529.94N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S7NSW1_9BACT4.680e-544.83GNAT family N-acetyltransferase n=1 Tax=Paludibacu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91135contigM-pyrifera_M_contig91135:4..489 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score65.1
Seed ortholog evalue3.5e-08
Seed eggNOG ortholog55529.EKX52713
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Acetyltransferase (GNAT) domain
EggNOG OGs2CZ21@1,2S7Y4@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size486
Cds size486
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816824.015278-CDS-M-pyrifera_M_contig91135:3..4891622816824.015278-CDS-M-pyrifera_M_contig91135:3..489Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91135 4..489 -
1692278199.7872925-CDS-M-pyrifera_M_contig91135:3..4891692278199.7872925-CDS-M-pyrifera_M_contig91135:3..489Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91135 4..489 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91135.21129.1prot_M-pyrifera_M_contig91135.21129.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91135 4..489 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91135.21129.1

>prot_M-pyrifera_M_contig91135.21129.1 ID=prot_M-pyrifera_M_contig91135.21129.1|Name=mRNA_M-pyrifera_M_contig91135.21129.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
MHKAYDFRPLRGEDEVETWAEMVGAQFSSKGGNPRRFYHKYLSDPSSRHD
SVFVAIYPPTGAIAASVRVQYPNFSQVFDDVSRPPSVSAQVRVFDRVIRD
GKGRRVRMAGIGEVCTAPDHRKRGLAKRLLHIALEWSKRAGMEISVLHAA
PGVQGLYASLGF
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mRNA from alignment at M-pyrifera_M_contig91135:4..489-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91135.21129.1 ID=mRNA_M-pyrifera_M_contig91135.21129.1|Name=mRNA_M-pyrifera_M_contig91135.21129.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig91135:4..489- (Macrocystis pyrifera P11B4 male)
ATGCATAAGGCGTATGATTTCCGTCCATTGCGTGGCGAAGATGAAGTAGA AACGTGGGCAGAAATGGTGGGAGCTCAATTTTCTTCCAAGGGTGGAAACC CTCGTCGTTTTTACCACAAGTATCTCTCCGACCCTTCAAGTCGTCATGAC AGTGTATTTGTGGCCATCTACCCACCAACAGGTGCAATAGCAGCCTCAGT ACGTGTCCAATATCCCAATTTCTCCCAAGTTTTTGACGACGTTTCGCGCC CCCCGTCGGTTTCTGCACAGGTTCGAGTGTTTGATCGAGTGATTCGTGAT GGAAAGGGGAGAAGAGTACGCATGGCTGGGATTGGAGAGGTGTGTACTGC TCCAGACCATCGCAAGCGTGGGCTAGCGAAGCGGTTGCTCCACATTGCTC TGGAATGGTCCAAACGCGCAGGAATGGAGATTTCTGTGTTGCACGCTGCG CCCGGAGTGCAAGGGTTGTACGCATCGTTGGGGTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91135:4..489-

>mRNA_M-pyrifera_M_contig91135.21129.1 ID=mRNA_M-pyrifera_M_contig91135.21129.1|Name=mRNA_M-pyrifera_M_contig91135.21129.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig91135:4..489- (Macrocystis pyrifera P11B4 male)
ATGCATAAGGCGTATGATTTCCGTCCATTGCGTGGCGAAGATGAAGTAGA
AACGTGGGCAGAAATGGTGGGAGCTCAATTTTCTTCCAAGGGTGGAAACC
CTCGTCGTTTTTACCACAAGTATCTCTCCGACCCTTCAAGTCGTCATGAC
AGTGTATTTGTGGCCATCTACCCACCAACAGGTGCAATAGCAGCCTCAGT
ACGTGTCCAATATCCCAATTTCTCCCAAGTTTTTGACGACGTTTCGCGCC
CCCCGTCGGTTTCTGCACAGGTTCGAGTGTTTGATCGAGTGATTCGTGAT
GGAAAGGGGAGAAGAGTACGCATGGCTGGGATTGGAGAGGTGTGTACTGC
TCCAGACCATCGCAAGCGTGGGCTAGCGAAGCGGTTGCTCCACATTGCTC
TGGAATGGTCCAAACGCGCAGGAATGGAGATTTCTGTGTTGCACGCTGCG
CCCGGAGTGCAAGGGTTGTACGCATCGTTGGGGTTCATGCATAAGGCGTA
TGATTTCCGTCCATTGCGTGGCGAAGATGAAGTAGAAACGTGGGCAGAAA
TGGTGGGAGCTCAATTTTCTTCCAAGGGTGGAAACCCTCGTCGTTTTTAC
CACAAGTATCTCTCCGACCCTTCAAGTCGTCATGACAGTGTATTTGTGGC
CATCTACCCACCAACAGGTGCAATAGCAGCCTCAGTACGTGTCCAATATC
CCAATTTCTCCCAAGTTTTTGACGACGTTTCGCGCCCCCCGTCGGTTTCT
GCACAGGTTCGAGTGTTTGATCGAGTGATTCGTGATGGAAAGGGGAGAAG
AGTACGCATGGCTGGGATTGGAGAGGTGTGTACTGCTCCAGACCATCGCA
AGCGTGGGCTAGCGAAGCGGTTGCTCCACATTGCTCTGGAATGGTCCAAA
CGCGCAGGAATGGAGATTTCTGTGTTGCACGCTGCGCCCGGAGTGCAAGG
GTTGTACGCATCGTTGGGGTTC
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