mRNA_M-pyrifera_M_contig91119.21125.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91119.21125.1
Unique NamemRNA_M-pyrifera_M_contig91119.21125.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91119.21125.1 vs. uniprot
Match: UPI001688FACC (bi-domain-containing oxidoreductase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001688FACC)

HSP 1 Score: 308 bits (790), Expect = 7.440e-96
Identity = 153/250 (61.20%), Postives = 198/250 (79.20%), Query Frame = 1
Query:    1 AKDLGMQDGSDSEVSFKQLVQNVTQEHGVDVTIITAATKSNAVINLAMEITRRKGRVVIVGDVGLNVERSHFYSKEIDLLMSSSYGPGRYDESYEEQGHDYPFAYVRWTMNRNMQAYLDLLKNGQVQLKPLINKVVSVDDATQVYQELATSKNS-PLAVVFSYPEYMQELPRAANSSAINIIGHRRAPDVPINYVLVGAGAFGTTMLVPHLNKFSKTFFLKGVVSRDPIRGGNYAKQNALEVFSSSLDEV 747
            AK LGM+ G+D+  + KQ+V+++T  +GVD T+I AATKS+AVINLAME+TR KG VVIVGDVGLNV+R+ FY KEIDLLMS+SYGPGRYD SYEE+G DYPF+YVRWT+NRNMQAYL+L+ +G++ ++ LI+KVVS+D+A  VY+ LAT K+S PL V+  YP+  + LP    ++ I I GHR+AP   INY LVGAGAFGT+MLVP + K    FFL+GVVSRD  RGGN+A+ N +E+F++ LD V
Sbjct:  352 AKSLGMEAGTDNPETLKQIVRDITGGYGVDRTLIAAATKSDAVINLAMEVTRAKGTVVIVGDVGLNVQRTLFYRKEIDLLMSTSYGPGRYDRSYEEEGRDYPFSYVRWTLNRNMQAYLELIASGRINIEALIDKVVSIDEAPAVYKTLATGKDSLPLGVLIQYPDDTRNLPEPPEATYITIRGHRKAPGELINYALVGAGAFGTSMLVPQMQKRKDRFFLRGVVSRDTTRGGNFARANQVELFTTELDPV 601          
BLAST of mRNA_M-pyrifera_M_contig91119.21125.1 vs. uniprot
Match: A0A6P0RRW8_9CYAN (Gfo/Idh/MocA family oxidoreductase n=2 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0RRW8_9CYAN)

HSP 1 Score: 304 bits (779), Expect = 3.420e-94
Identity = 150/250 (60.00%), Postives = 196/250 (78.40%), Query Frame = 1
Query:    1 AKDLGMQDGSDSEVSFKQLVQNVTQEHGVDVTIITAATKSNAVINLAMEITRRKGRVVIVGDVGLNVERSHFYSKEIDLLMSSSYGPGRYDESYEEQGHDYPFAYVRWTMNRNMQAYLDLLKNGQVQLKPLINKVVSVDDATQVYQELATSKNS-PLAVVFSYPEYMQELPRAANSSAINIIGHRRAPDVPINYVLVGAGAFGTTMLVPHLNKFSKTFFLKGVVSRDPIRGGNYAKQNALEVFSSSLDEV 747
            AKDLGM  G+DS  + K+LVQ++T+ +GVD T+I AATKS+AVINLAME+TRRKG VVIVGDVGLNV+R+ FY KEIDLLMS+SYGPGRYD+ YE++G DYPFAYVRWT+NRNMQ YL L+  G++ ++ LI++VVS+D A  VY+ LA S++  PL V+  YPE  ++LP    ++ I I GH++AP   INY LVGAGAFGT+ML+P + K    F+L+GVVSRD +RGGN+A+ N +EV ++ LD V
Sbjct:  351 AKDLGMDSGTDSPEALKKLVQDLTRGYGVDRTLIAAATKSDAVINLAMEVTRRKGTVVIVGDVGLNVQRAAFYRKEIDLLMSTSYGPGRYDQVYEQEGQDYPFAYVRWTLNRNMQTYLGLIAQGRLNIEALIDRVVSIDQAPSVYETLAESQDELPLGVLIHYPEDPRDLPEPPEATRITIRGHKKAPGELINYALVGAGAFGTSMLIPQMQKRKDRFWLRGVVSRDAVRGGNFARANQIEVLATELDTV 600          
BLAST of mRNA_M-pyrifera_M_contig91119.21125.1 vs. uniprot
Match: A0A2V8DK93_9BACT (Oxidoreductase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8DK93_9BACT)

HSP 1 Score: 283 bits (725), Expect = 1.890e-86
Identity = 143/261 (54.79%), Postives = 193/261 (73.95%), Query Frame = 1
Query:    1 AKDLGMQDGSDSEVSFKQLVQNVTQEHGVDVTIITAATKSNAVINLAMEITRRKGRVVIVGDVGLNVERSHFYSKEIDLLMSSSYGPGRYDESYEEQGHDYPFAYVRWTMNRNMQAYLDLLKNGQVQLKPLINKVVSVDDATQVYQELATSKNS-PLAVVFSYPEYMQELPRAANSSAINIIGHRRAPDVPINYVLVGAGAFGTTMLVPHLNKFSKTFFLKGVVSRDPIRGGNYAKQNALEVFSSSLDEVDTRDDVHMLVI 780
            A+ LGM  G+    + K +V++VT   G D TIITAATKS+AV+NLAM++TR KG VVIVGDVGL VER  FY KEIDLLMS+SYGPGRYD +YE +GHDYPFAYVRWT+NRNMQAYL+L+  G++ ++PLI++V+SVD+A   Y+ LA   ++ PL V+  YP+  ++LP   +S+ + I GHR+    P+NY LVGAG+FGT+MLVP + K    FFLK VVSR+  +GGN+A++N +EV +S L +V     + ++VI
Sbjct:  335 ARTLGMAQGASDTDTLKAVVRDVTGGGGADRTIITAATKSHAVVNLAMDVTRAKGTVVIVGDVGLKVERDAFYRKEIDLLMSTSYGPGRYDPAYEIEGHDYPFAYVRWTLNRNMQAYLELMARGRIDVQPLIDRVISVDEAPGAYRALADGTSAQPLGVLIRYPDDTRDLPEPPDSTRVVIRGHRKTAAGPLNYALVGAGSFGTSMLVPQMKKRRDRFFLKAVVSRNASQGGNFARENQVEVLASDLGQVLQDHSIDVVVI 595          
BLAST of mRNA_M-pyrifera_M_contig91119.21125.1 vs. uniprot
Match: A0A7T0C570_9BACT (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Candidatus Nitrohelix vancouverensis TaxID=2705534 RepID=A0A7T0C570_9BACT)

HSP 1 Score: 281 bits (719), Expect = 1.280e-85
Identity = 137/261 (52.49%), Postives = 193/261 (73.95%), Query Frame = 1
Query:    1 AKDLGMQDGSDSEVSFKQLVQNVTQEHGVDVTIITAATKSNAVINLAMEITRRKGRVVIVGDVGLNVERSHFYSKEIDLLMSSSYGPGRYDESYEEQGHDYPFAYVRWTMNRNMQAYLDLLKNGQVQLKPLINKVVSVDDATQVYQELATSKNS-PLAVVFSYPEYMQELPRAANSSAINIIGHRRAPDVPINYVLVGAGAFGTTMLVPHLNKFSKTFFLKGVVSRDPIRGGNYAKQNALEVFSSSLDEVDTRDDVHMLVI 780
            A+  G+Q G+   ++F+ LV+++TQ  G D TIITAATKS++V+NLAM +TRRKG+VV+VGDVGL++ER  FY KEIDLLMS+SYGPGRYD SYE +GHDYP+AYVRWT+NRNM+AY+D + + ++ +  LI+  + +D+A + Y+ LA+   + PL V+ SYP+ +++LP A  + +I + GHR  PD P  Y LVGAGAFGT MLVP + K    FFL+GVVSR+  +GGN+ + + +EVFSS + E+    D  ++VI
Sbjct:  334 ARKHGLQAGASDPLAFEVLVRDLTQGFGADRTIITAATKSSSVVNLAMNVTRRKGKVVVVGDVGLDIERPIFYKKEIDLLMSTSYGPGRYDASYELEGHDYPYAYVRWTLNRNMEAYMDAIASKKLDIASLIDLEIGIDEAPEAYKALASDGEALPLGVLLSYPDDLRDLPEAPEAKSITLRGHRICPDGPARYALVGAGAFGTCMLVPQMKKRKDLFFLRGVVSRNATQGGNFVRTHQVEVFSSDMSELLKDPDFDLMVI 594          
BLAST of mRNA_M-pyrifera_M_contig91119.21125.1 vs. uniprot
Match: UPI000364C962 (bi-domain-containing oxidoreductase n=1 Tax=Curvibacter lanceolatus TaxID=86182 RepID=UPI000364C962)

HSP 1 Score: 281 bits (718), Expect = 1.820e-85
Identity = 141/260 (54.23%), Postives = 190/260 (73.08%), Query Frame = 1
Query:    1 AKDLGMQDGSDSEVSFKQLVQNVTQEHGVDVTIITAATKSNAVINLAMEITRRKGRVVIVGDVGLNVERSHFYSKEIDLLMSSSYGPGRYDESYEEQGHDYPFAYVRWTMNRNMQAYLDLLKNGQVQLKPLINKVVSVDDATQVYQELATSKNSPLAVVFSYPEYMQELPRAANSSAINIIGHRRAPDVPINYVLVGAGAFGTTMLVPHLNKFSKTFFLKGVVSRDPIRGGNYAKQNALEVFSSSLDEVDTRDDVHMLVI 780
            A D GMQ G+ S  +   LV+++T   GVD T++ AATKS+AVINLAM+ITRR+G VVIVGDVGLNV+RS FY KEIDLLMS+SYGPGRYD SYEE G DYPFAYVRWT+NRNMQ+YLDL   G++++  LI++VV +D A  +Y  LA S  +PL V+ +YP+     P+  +SS + + GHR+    P   VLVGAGA+G +MLVP + +  + FFL+GVVSRD +RGGN+ ++  L++F++ L  V   + +++LVI
Sbjct:  333 ALDAGMQQGAGSPEALAALVRDLTGARGVDKTLMVAATKSDAVINLAMDITRRRGAVVIVGDVGLNVQRSQFYRKEIDLLMSTSYGPGRYDPSYEESGQDYPFAYVRWTLNRNMQSYLDLAAQGRLKIGSLIDEVVPLDQAPALYDRLARSAAAPLGVLLAYPDPAMPPPQPLDSSRVALRGHRKPQQGPAQAVLVGAGAYGQSMLVPMMERHPRHFFLRGVVSRDTVRGGNFVRERRLDIFATDLAPVLEDEAINLLVI 592          
BLAST of mRNA_M-pyrifera_M_contig91119.21125.1 vs. uniprot
Match: A0A2V8ES31_9BACT (Oxidoreductase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8ES31_9BACT)

HSP 1 Score: 280 bits (717), Expect = 4.720e-85
Identity = 139/261 (53.26%), Postives = 189/261 (72.41%), Query Frame = 1
Query:    1 AKDLGMQDGSDSEVSFKQLVQNVTQEHGVDVTIITAATKSNAVINLAMEITRRKGRVVIVGDVGLNVERSHFYSKEIDLLMSSSYGPGRYDESYEEQGHDYPFAYVRWTMNRNMQAYLDLLKNGQVQLKPLINKVVSVDDATQVYQELATSKNS-PLAVVFSYPEYMQELPRAANSSAINIIGHRRAPDVPINYVLVGAGAFGTTMLVPHLNKFSKTFFLKGVVSRDPIRGGNYAKQNALEVFSSSLDEVDTRDDVHMLVI 780
            A+ LGM+ G+    +FK LV++VT   G D T+ITAATKS+AV+NLAM++TR KG VVIVGDVGL VER  FY KEIDLLMS+SYGPGRYD SYE +G DYPFAYVRWT+NRN+Q+YLDL+  G++ ++ L+++V+S+D+A   Y+ELA +    PL VV  YP+  ++LP  A+S+ + + GHR  P  P+ Y LVGA AFGT+MLVP + K    FFL+ VVSR+    GN+A+ N +E+ +S  D+V     + ++VI
Sbjct:  366 ARSLGMEWGATDADAFKSLVRDVTAGRGADRTLITAATKSSAVVNLAMDVTRAKGTVVIVGDVGLKVEREVFYRKEIDLLMSTSYGPGRYDASYEVEGRDYPFAYVRWTLNRNLQSYLDLIARGRLDVQALVDRVISIDEAPAAYRELAAADGPLPLGVVIRYPDDSRDLPEPADSTRVVVRGHRETPAGPLKYALVGASAFGTSMLVPQMKKRRDRFFLRAVVSRNAAHAGNFARDNQVEILTSDFDQVLRDPGIDLVVI 626          
BLAST of mRNA_M-pyrifera_M_contig91119.21125.1 vs. uniprot
Match: A0A2D6JS06_9PROT (Oxidoreductase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6JS06_9PROT)

HSP 1 Score: 279 bits (713), Expect = 1.320e-84
Identity = 138/258 (53.49%), Postives = 188/258 (72.87%), Query Frame = 1
Query:   10 LGMQDGSDSEVSFKQLVQNVTQEHGVDVTIITAATKSNAVINLAMEITRRKGRVVIVGDVGLNVERSHFYSKEIDLLMSSSYGPGRYDESYEEQGHDYPFAYVRWTMNRNMQAYLDLLKNGQVQLKPLINKVVSVDDATQVYQELATSKNS-PLAVVFSYPEYMQELPRAANSSAINIIGHRRAPDVPINYVLVGAGAFGTTMLVPHLNKFSKTFFLKGVVSRDPIRGGNYAKQNALEVFSSSLDEVDTRDDVHMLVI 780
            LGM DG+     F ++V++ T+ HG D  +ITAATKS+ VINL+MEITRRKG VV+VGDVGLN+ER  FY KEIDLLMS+SYGPGRYD +YE  G+DYPFAYVRWT NRNM++YLDL+ +G++ ++PLI+ V+ +D+A + Y+ LA  K + PL V+ SYPE  +      + +AI + GHR+    PIN+ LVGAGAFGT+MLVP + K    FFLK VVS D  RGGN+A+   +E+ +S ++ V +  ++ ++VI
Sbjct:  355 LGMDDGASDTDDFLRIVRDKTKGHGADRMLITAATKSSDVINLSMEITRRKGTVVLVGDVGLNIERPDFYRKEIDLLMSTSYGPGRYDAAYETDGNDYPFAYVRWTENRNMESYLDLVSSGRLNIEPLIDTVIPIDEAPETYKALAGGKGAKPLGVLISYPETEKPDAPEKDDAAITLRGHRKPQSGPINFALVGAGAFGTSMLVPQMQKQKDRFFLKAVVSSDATRGGNFARSQGVEILASDMEPVLSNPEIDLVVI 612          
BLAST of mRNA_M-pyrifera_M_contig91119.21125.1 vs. uniprot
Match: A0A2V8C1A6_9BACT (Oxidoreductase (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8C1A6_9BACT)

HSP 1 Score: 263 bits (671), Expect = 2.300e-82
Identity = 140/263 (53.23%), Postives = 193/263 (73.38%), Query Frame = 1
Query:    1 AKDLGMQDGSDSEVSFKQLVQNVTQEHGVDVTIITAATKSNAVINLAMEITRRKGRVVIVGDVGLNVERSHFYSKEIDLLMSSSYGPGRYDESYEEQGHDYPFAYVRWTMNRNMQAYLDLLKNGQVQLKPLINKVVSVDDATQVYQELATSKNS-PLAVVFSY-PEYMQELPRAANSSAINIIGHRRAP-DVPINYVLVGAGAFGTTMLVPHLNKFSKTFFLKGVVSRDPIRGGNYAKQNALEVFSSSLDEVDTRDDVHMLVI 780
            A+ LGM+ G+    +F+ LV++VT  HG D TI+TAATKS+AVINLAM++TRRKGRVVIVGDVGL V+R+ FY KEIDLLMS+SYGPGRYD SYE +GHDYPFAYVRWT NRNMQ++L+L  +G++ + PLI++VVS+D+A  +Y+ LA ++   PL V+  Y P+      R+A ++    I   RAP D  I Y LVGAG+FGT+MLVP +++    + LK VVSR+  +GGN+A+   ++V +S+LD+V     + ++VI
Sbjct:   55 AQSLGMRYGASDADAFRALVRDVTGGHGADQTIMTAATKSDAVINLAMDVTRRKGRVVIVGDVGLKVDRNVFYQKEIDLLMSTSYGPGRYDASYELEGHDYPFAYVRWTENRNMQSFLELAASGRIAVAPLIDRVVSIDEAPALYRTLADAEGDLPLGVLIQYSPDAADASERSAPTTVA--IRRARAPADGRIAYALVGAGSFGTSMLVPQMDRCRDRYLLKAVVSRNAAQGGNFARDRGVDVLTSNLDDVLADASIDLVVI 315          
BLAST of mRNA_M-pyrifera_M_contig91119.21125.1 vs. uniprot
Match: A0A2V8BMC1_9BACT (Oxidoreductase n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8BMC1_9BACT)

HSP 1 Score: 273 bits (698), Expect = 2.500e-82
Identity = 138/261 (52.87%), Postives = 187/261 (71.65%), Query Frame = 1
Query:    1 AKDLGMQDGSDSEVSFKQLVQNVTQEHGVDVTIITAATKSNAVINLAMEITRRKGRVVIVGDVGLNVERSHFYSKEIDLLMSSSYGPGRYDESYEEQGHDYPFAYVRWTMNRNMQAYLDLLKNGQVQLKPLINKVVSVDDATQVYQELA-TSKNSPLAVVFSYPEYMQELPRAANSSAINIIGHRRAPDVPINYVLVGAGAFGTTMLVPHLNKFSKTFFLKGVVSRDPIRGGNYAKQNALEVFSSSLDEVDTRDDVHMLVI 780
            AK LGM  G+     FK LV++ T   G D T+ITAAT+S+AV+NLAM++TR KG VVIVGDVGLNV+R+ FY KEIDLLMS+SYGPGRYD++YE  G DYPFAYVRWT+NRNMQAYL+L+ +G++ +  LI++V+++D+A   Y  LA  +   PL V+  YP+  + LP  A+++ I + GH+ A    INY LVGAGAFG +MLVP + K    +FL+GVVSR+  +GGN+A+ N +EV ++ L  V      H++VI
Sbjct:  362 AKTLGMDAGASDSDGFKALVRDRTGGMGADRTLITAATRSDAVVNLAMDVTRAKGTVVIVGDVGLNVQRATFYRKEIDLLMSTSYGPGRYDQAYEADGRDYPFAYVRWTLNRNMQAYLELIASGRLNIDGLIDRVITIDEAQAAYAALAGAAATPPLGVLIRYPDDSRALPEPADATRITVRGHKPARSELINYALVGAGAFGMSMLVPQMKKRKDRYFLRGVVSRNSTQGGNFARDNGVEVLATELKTVLDDPSFHLMVI 622          
BLAST of mRNA_M-pyrifera_M_contig91119.21125.1 vs. uniprot
Match: A0A2W1MKK4_9PSED (Oxidoreductase n=4 Tax=Pseudomonas TaxID=286 RepID=A0A2W1MKK4_9PSED)

HSP 1 Score: 269 bits (687), Expect = 6.040e-81
Identity = 137/260 (52.69%), Postives = 192/260 (73.85%), Query Frame = 1
Query:    1 AKDLGMQDGSDSEVSFKQLVQNVTQEHGVDVTIITAATKSNAVINLAMEITRRKGRVVIVGDVGLNVERSHFYSKEIDLLMSSSYGPGRYDESYEEQGHDYPFAYVRWTMNRNMQAYLDLLKNGQVQLKPLINKVVSVDDATQVYQELATSKNSPLAVVFSYPEYMQELPRAANSSAINIIGHRRAPDVPINYVLVGAGAFGTTMLVPHLNKFSKTFFLKGVVSRDPIRGGNYAKQNALEVFSSSLDEVDTRDDVHMLVI 780
            A+ LGM+ GS +   F +LV+++++  G D T+ITAATKS+AVIN AME+TRR+G VVIVGD+GLNV+R+HFY KEIDLLMS+SYGPGRYD +YEE+G DYPFAYVRWT+NRNMQ+Y++L+  G++ ++ L++ V  VD+A  +Y+ LA+S  +P+ V+  Y    + +   + +  I++ G R      INY+LVGAGA+G +MLVP L++     FL+GVVSRD +RGGN+ ++  L VF+S+LD      DVHMLVI
Sbjct:  332 ARKLGMEYGSANPAEFLRLVRDISEGQGCDRTLITAATKSDAVINTAMEVTRRRGVVVIVGDIGLNVQRAHFYRKEIDLLMSTSYGPGRYDTNYEEKGRDYPFAYVRWTLNRNMQSYMELIAAGRLDVESLVDIVAPVDEAPTLYKMLASSPEAPIGVLLDYTSG-RSVVEPSEAERIHLRGARTPQADKINYLLVGAGAYGQSMLVPMLDR-QDGIFLRGVVSRDAVRGGNFVRERRLGVFASNLDSAIDDPDVHMLVI 589          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91119.21125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001688FACC7.440e-9661.20bi-domain-containing oxidoreductase n=2 Tax=unclas... [more]
A0A6P0RRW8_9CYAN3.420e-9460.00Gfo/Idh/MocA family oxidoreductase n=2 Tax=unclass... [more]
A0A2V8DK93_9BACT1.890e-8654.79Oxidoreductase n=2 Tax=Acidobacteria bacterium Tax... [more]
A0A7T0C570_9BACT1.280e-8552.49Gfo/Idh/MocA family oxidoreductase n=1 Tax=Candida... [more]
UPI000364C9621.820e-8554.23bi-domain-containing oxidoreductase n=1 Tax=Curvib... [more]
A0A2V8ES31_9BACT4.720e-8553.26Oxidoreductase n=1 Tax=Acidobacteria bacterium Tax... [more]
A0A2D6JS06_9PROT1.320e-8453.49Oxidoreductase n=1 Tax=Rhodospirillaceae bacterium... [more]
A0A2V8C1A6_9BACT2.300e-8253.23Oxidoreductase (Fragment) n=1 Tax=Acidobacteria ba... [more]
A0A2V8BMC1_9BACT2.500e-8252.87Oxidoreductase n=3 Tax=Acidobacteria bacterium Tax... [more]
A0A2W1MKK4_9PSED6.040e-8152.69Oxidoreductase n=4 Tax=Pseudomonas TaxID=286 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91119contigM-pyrifera_M_contig91119:2..781 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score229.2
Seed ortholog evalue2.2e-57
Seed eggNOG ortholog941449.dsx2_1078
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PFAM oxidoreductase
EggNOG OGs1PDZZ@1224,2WJDW@28221,42M63@68525,COG0673@1,COG0673@2,COG1063@1,COG1063@2
COG Functional cat.E
Best tax levelDeltaproteobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size780
Cds size765
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816823.8634026-UTR-M-pyrifera_M_contig91119:1..161622816823.8634026-UTR-M-pyrifera_M_contig91119:1..16Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig91119 2..16 +
1692278199.71875-UTR-M-pyrifera_M_contig91119:1..161692278199.71875-UTR-M-pyrifera_M_contig91119:1..16Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig91119 2..16 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816823.87618-CDS-M-pyrifera_M_contig91119:16..7811622816823.87618-CDS-M-pyrifera_M_contig91119:16..781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91119 17..781 +
1692278199.7326066-CDS-M-pyrifera_M_contig91119:16..7811692278199.7326066-CDS-M-pyrifera_M_contig91119:16..781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91119 17..781 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91119.21125.1prot_M-pyrifera_M_contig91119.21125.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91119 17..781 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91119.21125.1

>prot_M-pyrifera_M_contig91119.21125.1 ID=prot_M-pyrifera_M_contig91119.21125.1|Name=mRNA_M-pyrifera_M_contig91119.21125.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=255bp
MQDGSDSEVSFKQLVQNVTQEHGVDVTIITAATKSNAVINLAMEITRRKG
RVVIVGDVGLNVERSHFYSKEIDLLMSSSYGPGRYDESYEEQGHDYPFAY
VRWTMNRNMQAYLDLLKNGQVQLKPLINKVVSVDDATQVYQELATSKNSP
LAVVFSYPEYMQELPRAANSSAINIIGHRRAPDVPINYVLVGAGAFGTTM
LVPHLNKFSKTFFLKGVVSRDPIRGGNYAKQNALEVFSSSLDEVDTRDDV
HMLVI
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mRNA from alignment at M-pyrifera_M_contig91119:2..781+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91119.21125.1 ID=mRNA_M-pyrifera_M_contig91119.21125.1|Name=mRNA_M-pyrifera_M_contig91119.21125.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig91119:2..781+ (Macrocystis pyrifera P11B4 male)
GCAAAAGACTTAGGCATGCAGGATGGCAGTGATAGTGAGGTTTCTTTCAA GCAGTTAGTCCAAAATGTAACGCAAGAGCATGGTGTTGATGTCACCATCA TTACTGCGGCAACAAAATCAAATGCAGTCATTAACTTGGCCATGGAAATT ACGCGTCGCAAAGGGCGTGTTGTGATCGTTGGGGATGTGGGACTCAATGT TGAGCGTAGTCATTTTTATAGCAAAGAAATTGATTTGCTCATGAGCTCAT CCTACGGTCCTGGCCGCTACGATGAATCGTATGAAGAGCAGGGTCATGAT TACCCATTTGCGTATGTGCGGTGGACAATGAATCGCAACATGCAAGCGTA TTTAGACTTGCTCAAAAATGGTCAAGTGCAATTAAAGCCATTGATTAATA AGGTTGTGAGTGTAGATGACGCGACCCAAGTTTACCAAGAATTGGCAACA AGCAAAAATTCACCCTTAGCAGTTGTTTTTTCATACCCTGAATATATGCA GGAATTGCCGCGAGCTGCTAATTCCTCTGCAATAAATATTATTGGACATC GTCGTGCTCCAGATGTACCTATTAATTATGTGTTAGTTGGTGCCGGCGCA TTTGGAACAACCATGCTAGTACCGCATCTCAATAAGTTCAGTAAAACCTT TTTTCTAAAAGGTGTCGTCAGTCGCGACCCAATTCGAGGCGGGAACTACG CCAAACAGAATGCATTAGAAGTTTTTTCCAGCAGTCTTGATGAAGTTGAC ACACGTGACGATGTGCATATGTTAGTAATT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91119:2..781+

>mRNA_M-pyrifera_M_contig91119.21125.1 ID=mRNA_M-pyrifera_M_contig91119.21125.1|Name=mRNA_M-pyrifera_M_contig91119.21125.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1530bp|location=Sequence derived from alignment at M-pyrifera_M_contig91119:2..781+ (Macrocystis pyrifera P11B4 male)
ATGCAGGATGGCAGTGATAGTGAGGTTTCTTTCAAGCAGTTAGTCCAAAA
TGTAACGCAAGAGCATGGTGTTGATGTCACCATCATTACTGCGGCAACAA
AATCAAATGCAGTCATTAACTTGGCCATGGAAATTACGCGTCGCAAAGGG
CGTGTTGTGATCGTTGGGGATGTGGGACTCAATGTTGAGCGTAGTCATTT
TTATAGCAAAGAAATTGATTTGCTCATGAGCTCATCCTACGGTCCTGGCC
GCTACGATGAATCGTATGAAGAGCAGGGTCATGATTACCCATTTGCGTAT
GTGCGGTGGACAATGAATCGCAACATGCAAGCGTATTTAGACTTGCTCAA
AAATGGTCAAGTGCAATTAAAGCCATTGATTAATAAGGTTGTGAGTGTAG
ATGACGCGACCCAAGTTTACCAAGAATTGGCAACAAGCAAAAATTCACCC
TTAGCAGTTGTTTTTTCATACCCTGAATATATGCAGGAATTGCCGCGAGC
TGCTAATTCCTCTGCAATAAATATTATTGGACATCGTCGTGCTCCAGATG
TACCTATTAATTATGTGTTAGTTGGTGCCGGCGCATTTGGAACAACCATG
CTAGTACCGCATCTCAATAAGTTCAGTAAAACCTTTTTTCTAAAAGGTGT
CGTCAGTCGCGACCCAATTCGAGGCGGGAACTACGCCAAACAGAATGCAT
TAGAAGTTTTTTCCAGCAGTCTTGATGAAGTTGACACACGTGACGATGTG
CATATGTTAGTAATTATGCAGGATGGCAGTGATAGTGAGGTTTCTTTCAA
GCAGTTAGTCCAAAATGTAACGCAAGAGCATGGTGTTGATGTCACCATCA
TTACTGCGGCAACAAAATCAAATGCAGTCATTAACTTGGCCATGGAAATT
ACGCGTCGCAAAGGGCGTGTTGTGATCGTTGGGGATGTGGGACTCAATGT
TGAGCGTAGTCATTTTTATAGCAAAGAAATTGATTTGCTCATGAGCTCAT
CCTACGGTCCTGGCCGCTACGATGAATCGTATGAAGAGCAGGGTCATGAT
TACCCATTTGCGTATGTGCGGTGGACAATGAATCGCAACATGCAAGCGTA
TTTAGACTTGCTCAAAAATGGTCAAGTGCAATTAAAGCCATTGATTAATA
AGGTTGTGAGTGTAGATGACGCGACCCAAGTTTACCAAGAATTGGCAACA
AGCAAAAATTCACCCTTAGCAGTTGTTTTTTCATACCCTGAATATATGCA
GGAATTGCCGCGAGCTGCTAATTCCTCTGCAATAAATATTATTGGACATC
GTCGTGCTCCAGATGTACCTATTAATTATGTGTTAGTTGGTGCCGGCGCA
TTTGGAACAACCATGCTAGTACCGCATCTCAATAAGTTCAGTAAAACCTT
TTTTCTAAAAGGTGTCGTCAGTCGCGACCCAATTCGAGGCGGGAACTACG
CCAAACAGAATGCATTAGAAGTTTTTTCCAGCAGTCTTGATGAAGTTGAC
ACACGTGACGATGTGCATATGTTAGTAATT
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