mRNA_M-pyrifera_M_contig91116.21123.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig91116.21123.1 vs. uniprot
Match: UPI00189A89E7 (cell cycle checkpoint protein RAD17 n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI00189A89E7) HSP 1 Score: 112 bits (279), Expect = 9.910e-26 Identity = 72/185 (38.92%), Postives = 105/185 (56.76%), Query Frame = 1 Query: 4 IGSRDMSYNLFRALGKICYNKRLMHAWPHDSPVAGLETSSSLIPPS-------SQRYRKDLAFNPEKVLSLVHISDEVFTAFLHENYLRFFRDIDDAASAADYISDADTLAAGLGYQAMSSPAVGSYVSSVASRGLLYSNRLPVERKFQPMYKPFLIKNSNDRQDNASVLTTLFVTHSMPPPNVQ 537 +G +D S LFRALGKI + KR ++P A ET+S PP S +R+ L NPE V+ +S EVF+ +LH+NYL FF D++D A++Y+SDAD L+A +++ +G Y SSVA+RGLL+SN V F+P++KP S +DN +LF + + P +Q Sbjct: 212 VGGKDASLFLFRALGKILHCKR-------ENPEAADETTS---PPEPGLSCHLSHHHREPLLINPELVVERSQMSAEVFSLYLHQNYLDFFSDMEDVGRASEYLSDADLLSADWTSRSI----LGQYGSSVATRGLLHSNSHQVSSAFRPLHKPSWFLVSRKHRDNCQAAQSLFRSFCLTPVTLQ 382
BLAST of mRNA_M-pyrifera_M_contig91116.21123.1 vs. uniprot
Match: A0A3Q4AZM9_MOLML (RAD17 checkpoint clamp loader component n=2 Tax=Mola mola TaxID=94237 RepID=A0A3Q4AZM9_MOLML) HSP 1 Score: 112 bits (279), Expect = 2.060e-25 Identity = 71/178 (39.89%), Postives = 101/178 (56.74%), Query Frame = 1 Query: 7 GSRDMSYNLFRALGKICYNKRLMHAWPHDSPVAGLETSSSLIPPS-SQRYRKDLAFNPEKVLSLVHISDEVFTAFLHENYLRFFRDIDDAASAADYISDADTLAAGLGYQAMSSPAVGSYVSSVASRGLLYSNRLPVERKFQPMYKPFLIKNSNDRQDNASVLTTLFVTHSMPPPNVQ 537 G +D S LFRALGKI + KR P AG S +PP S YR L NPE V+ H+S E F +LH+NYL FF +++D A++Y+SDAD L+A M+ +G Y SSVA+RGLL+SN V F+P++KP + + + ++N +LF + M P ++Q Sbjct: 378 GGKDASLFLFRALGKILHCKR--------DPEAGECASGPGLPPHLSHHYRNMLLVNPELVVERSHMSGEFFILYLHQNYLDFFSEVEDVDHASEYLSDADLLSADW----MNRSTMGDYGSSVATRGLLFSNSQQVSVGFRPLHKPNWLLVNKNHKENCLAAQSLFRSFCMMPVSLQ 543
BLAST of mRNA_M-pyrifera_M_contig91116.21123.1 vs. uniprot
Match: A0A3B5KL10_TAKRU (AAA domain-containing protein n=6 Tax=Takifugu TaxID=31032 RepID=A0A3B5KL10_TAKRU) HSP 1 Score: 111 bits (278), Expect = 2.650e-25 Identity = 71/179 (39.66%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 4 IGSRDMSYNLFRALGKICYNKRLMHAWPHDSPVAGLETSSSLIPPSSQRYRKD-LAFNPEKVLSLVHISDEVFTAFLHENYLRFFRDIDDAASAADYISDADTLAAGLGYQAMSSPAVGSYVSSVASRGLLYSNRLPVERKFQPMYKPFLIKNSNDRQDNASVLTTLFVTHSMPPPNVQ 537 IG +D S LFRALGKI + KR H SP A +P +++D L PE V+ H+S EVF +LH+NYL FF ++DD A A+ Y SDAD LAA M+ + Y SSVA+RG+LYSN F+P+YKP + + + Q+N +LF + + P ++Q Sbjct: 349 IGGKDASLFLFRALGKILHCKR----GNHGSPEAAQCAPGPALPSHLAHHQRDPLLITPEMVVEHSHMSGEVFNLYLHQNYLDFFSEVDDVAEASKYQSDADLLAANW----MTRSTMRDYGSSVATRGILYSNTRHTSVGFRPLYKPNWLLVNKNHQENCLAAQSLFGSFCLTPVSLQ 519
BLAST of mRNA_M-pyrifera_M_contig91116.21123.1 vs. uniprot
Match: A0A2I4D1H8_9TELE (cell cycle checkpoint protein RAD17 n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4D1H8_9TELE) HSP 1 Score: 110 bits (276), Expect = 5.130e-25 Identity = 73/182 (40.11%), Postives = 103/182 (56.59%), Query Frame = 1 Query: 4 IGSRDMSYNLFRALGKICYNKRLMHAWPHDSPVAGLETSSSLIPPSS----QRYRKDLAFNPEKVLSLVHISDEVFTAFLHENYLRFFRDIDDAASAADYISDADTLAAGLGYQAMSSPAVGSYVSSVASRGLLYSNRLPVERKFQPMYKPFLIKNSNDRQDNASVLTTLFVTHSMPPPNVQ 537 IG +D S LFRALGKI Y KR +P A ET+S P S +R+ L NPE V+ +S EVF+ +LH+NYL FF +I+D A++Y+SDAD L+A ++ + Y SSVA+RGLL+SN PV F+P++KP S +DN +LF + + P ++Q Sbjct: 366 IGGKDASLFLFRALGKILYCKR-------GTPEAADETTSCPGPALSCHLSHYHREPLLINPELVMERSQMSAEVFSLYLHQNYLDFFTEIEDVDRASEYLSDADLLSADW----INRSILQQYGSSVATRGLLHSNSHPVSSGFRPLHKPSWFLVSRKHRDNCQAAQSLFRSFCLTPVSLQ 536
BLAST of mRNA_M-pyrifera_M_contig91116.21123.1 vs. uniprot
Match: UPI0018ACD965 (cell cycle checkpoint protein RAD17 isoform X1 n=3 Tax=Kryptolebias marmoratus TaxID=37003 RepID=UPI0018ACD965) HSP 1 Score: 109 bits (272), Expect = 1.780e-24 Identity = 73/185 (39.46%), Postives = 102/185 (55.14%), Query Frame = 1 Query: 4 IGSRDMSYNLFRALGKICYNKRLMHAWPHDSPVAGLETSSSLIPPS-------SQRYRKDLAFNPEKVLSLVHISDEVFTAFLHENYLRFFRDIDDAASAADYISDADTLAAGLGYQAMSSPAVGSYVSSVASRGLLYSNRLPVERKFQPMYKPFLIKNSNDRQDNASVLTTLFVTHSMPPPNVQ 537 IG +D S LFRALGKI ++KR P A ET+ PP S +R+ L NPE VL +S EVF+ +LH+NYL FF D++D A++Y+SDAD L+A +++ +G Y SSV SRGLL+SN V F+P++KP S +DN LF + + P ++Q Sbjct: 367 IGGKDASLFLFRALGKILHSKRR-------DPKAANETTG---PPGPGLSFHLSHHHREPLLINPELVLERSQMSAEVFSLYLHQNYLDFFCDMEDVDRASEYLSDADLLSADWTSRSI----LGEYGSSVVSRGLLHSNSHQVSSGFRPLHKPSWFLVSRKHRDNCQAAQCLFRSFCLTPVSLQ 537
BLAST of mRNA_M-pyrifera_M_contig91116.21123.1 vs. uniprot
Match: UPI00145B80FC (cell cycle checkpoint protein RAD17 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145B80FC) HSP 1 Score: 108 bits (270), Expect = 3.360e-24 Identity = 67/179 (37.43%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 4 IGSRDMSYNLFRALGKICYNKRLMHAWPHDSPVAGLETSSSLIPPS-SQRYRKDLAFNPEKVLSLVHISDEVFTAFLHENYLRFFRDIDDAASAADYISDADTLAAGLGYQAMSSPAVGSYVSSVASRGLLYSNRLPVERKFQPMYKPFLIKNSNDRQDNASVLTTLFVTHSMPPPNVQ 537 IG +D S LFRALGKI Y KR +H S E +PP SQ +R+ L +PE V+ H+ ++F+ +LH+NYL FF +I+D A++Y+SDAD L+A +++ + Y SSVA+RGLL+SN F+P++KP + + N TLF + + P +Q Sbjct: 369 IGGKDASLFLFRALGKILYCKRAVH---DGSEAVSSELQGGSLPPHLSQHHREPLLEDPEMVVERSHMPSDMFSLYLHQNYLDFFCEIEDVERASEYLSDADLLSANWTTRSL----LSDYSSSVATRGLLHSNFQQATMGFRPLHKPHWLHVQKKYRGNCLAAQTLFRSFCLTPVALQ 540
BLAST of mRNA_M-pyrifera_M_contig91116.21123.1 vs. uniprot
Match: Q4SDG1_TETNG ((spotted green pufferfish) hypothetical protein n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4SDG1_TETNG) HSP 1 Score: 107 bits (268), Expect = 7.380e-24 Identity = 68/179 (37.99%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 4 IGSRDMSYNLFRALGKICYNKRLMHAWPHDSPVAGLETSSSLIPPSSQRYRKD-LAFNPEKVLSLVHISDEVFTAFLHENYLRFFRDIDDAASAADYISDADTLAAGLGYQAMSSPAVGSYVSSVASRGLLYSNRLPVERKFQPMYKPFLIKNSNDRQDNASVLTTLFVTHSMPPPNVQ 537 IG +D + LFRALGKI + KR + P AG + +P + +D L +PE V+ H+S EVF +LH+NYL FF ++DD A A+ Y+SDAD LAA M+ + Y SSVA+RG+LYSN F+P++KP + + Q+N +LF + + P ++Q Sbjct: 304 IGGKDATLFLFRALGKILHCKR----GSPEGPEAGQCAPEAALPSHLAHHHRDPLLVSPEMVVEHSHMSGEVFNLYLHQNYLDFFSEVDDVAQASKYLSDADLLAACW----MTRSVMRDYGSSVATRGILYSNTRQTSVGFRPLHKPNWLLVNRTHQENCLAAQSLFGSFCLTPVSLQ 474
BLAST of mRNA_M-pyrifera_M_contig91116.21123.1 vs. uniprot
Match: UPI000443DB72 (cell cycle checkpoint protein RAD17-like isoform X3 n=1 Tax=Poecilia formosa TaxID=48698 RepID=UPI000443DB72) HSP 1 Score: 103 bits (257), Expect = 2.430e-23 Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 4 IGSRDMSYNLFRALGKICYNKRLMHAWPHDSPVA-GLETSSSLIPPSSQRYRKDLAFNPEKVLSLVHISDEVFTAFLHENYLRFFRDIDDAASAADYISDADTLAAGLGYQAMSSPAVGSYVSSVASRGLLYSNRLPVERKFQPMYKPFLIKNSNDRQDNASVLTTLFVTHSMPPPNVQ 537 IG +D+S+ LFRALGKI + KR P++S A GL L+ Q R+ L PE V+ S E F+ LH+NYL FF DI+D A++Y+SDAD LA M +G Y SSVA+RGL++SN + F+P++KP + QDN +LF + + P ++Q Sbjct: 94 IGGKDVSFFLFRALGKILHCKRGNGDCPNESKGASGLVLPFHLL----QHRREVLLVQPELVVERSETSGEFFSLCLHQNYLDFFSDIEDVDRASEYLSDADLLAGNW----MIRHTIGDYGSSVATRGLIHSNSCQLPVGFRPLHKPSWCLVNKKHQDNCVAAQSLFRSFCLTPVSLQ 264
BLAST of mRNA_M-pyrifera_M_contig91116.21123.1 vs. uniprot
Match: A0A1A8LU19_9TELE (RAD17 homolog n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8LU19_9TELE) HSP 1 Score: 103 bits (257), Expect = 3.230e-23 Identity = 68/174 (39.08%), Postives = 95/174 (54.60%), Query Frame = 1 Query: 4 IGSRDMSYNLFRALGKICYNKRLMHAWPHDSPVAGLETSSSLIPPSSQRYRKDLAFNPEKVLSLVHISDEVFTAFLHENYLRFFRDIDDAASAADYISDADTLAAGLGYQAMSSPAVGSYVSSVASRGLLYSNRLPVERKFQPMYKPFLIKNSNDRQDNASVLTTLFVTHSMPP 525 IG +D S LFRALGKI + KR D+ V L P Q +R L PE V+ H+S E+F+ +LH+NYL FF D++D A+ Y+SDAD L A +++ P Y SSVASRGLL+S+ V F+P++KP + +DN +LF + +PP Sbjct: 88 IGGKDASLFLFRALGKILHCKR----GKQDASVP----EPGLPPHLLQHHRHTLLVTPELVVERSHMSGELFSLYLHQNYLDFFSDLEDVDRASQYLSDADLLTADWTSRSLLEP----YGSSVASRGLLHSHSHQVSSGFRPLHKPSWFLVNKKYRDNCLAAQSLFRSFGLPP 249
BLAST of mRNA_M-pyrifera_M_contig91116.21123.1 vs. uniprot
Match: UPI001E8DABAE (cell cycle checkpoint protein RAD17 isoform X2 n=1 Tax=Micropterus dolomieu TaxID=147949 RepID=UPI001E8DABAE) HSP 1 Score: 105 bits (262), Expect = 3.820e-23 Identity = 66/178 (37.08%), Postives = 99/178 (55.62%), Query Frame = 1 Query: 4 IGSRDMSYNLFRALGKICYNKRLMHAWPHDSPVAGLETSSSLIPPSSQRYRKDLAFNPEKVLSLVHISDEVFTAFLHENYLRFFRDIDDAASAADYISDADTLAAGLGYQAMSSPAVGSYVSSVASRGLLYSNRLPVERKFQPMYKPFLIKNSNDRQDNASVLTTLFVTHSMPPPNVQ 537 IG +D S LFRALGKI + KR H +P GL + S +R+ L +PE V+ H+S E F +LH+NYL FF +++D A++Y+SDAD L A ++ + Y SSVA+RGLLYSN V F+P++KP + + ++N +LF + + P ++Q Sbjct: 371 IGGKDASLFLFRALGKILHCKRGNHEGAECAPGLGLPSHLS------HHHRETLLVDPEVVVERSHMSGEFFNLYLHQNYLDFFSEVEDVERASEYLSDADLLTADWTCRST----MEDYGSSVATRGLLYSNAQHVSVGFRPLHKPNWLLVNKKHRENCLAAQSLFRSFCLTPVSLQ 538 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91116.21123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig91116.21123.1 >prot_M-pyrifera_M_contig91116.21123.1 ID=prot_M-pyrifera_M_contig91116.21123.1|Name=mRNA_M-pyrifera_M_contig91116.21123.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp MIGSRDMSYNLFRALGKICYNKRLMHAWPHDSPVAGLETSSSLIPPSSQRback to top mRNA from alignment at M-pyrifera_M_contig91116:84..636+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig91116.21123.1 ID=mRNA_M-pyrifera_M_contig91116.21123.1|Name=mRNA_M-pyrifera_M_contig91116.21123.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=553bp|location=Sequence derived from alignment at M-pyrifera_M_contig91116:84..636+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig91116:84..636+ >mRNA_M-pyrifera_M_contig91116.21123.1 ID=mRNA_M-pyrifera_M_contig91116.21123.1|Name=mRNA_M-pyrifera_M_contig91116.21123.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig91116:84..636+ (Macrocystis pyrifera P11B4 male)back to top |