mRNA_M-pyrifera_M_contig91114.21122.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91114.21122.1
Unique NamemRNA_M-pyrifera_M_contig91114.21122.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91114.21122.1 vs. uniprot
Match: A0A1Q9NE60_HEILC (Copper-exporting P-type ATPase A n=1 Tax=Heimdallarchaeota archaeon (strain LC_2) TaxID=1841597 RepID=A0A1Q9NE60_HEILC)

HSP 1 Score: 187 bits (476), Expect = 2.920e-51
Identity = 103/234 (44.02%), Postives = 151/234 (64.53%), Query Frame = 1
Query:   10 GARDVFAVLADLGFSPKLVEADDRADNLRRRMEIQKYRRKVISCMVFAIPALFLAFGFRYIP--PFSGWLHRSIYGGLTVLSLIMWILATPVQFWQGWTFYHHSFLALRHGYADINVLVAIGSSAAYFYSVISIVVSMITPSFQGTEFFDTAILLITFVLLGRYLENVAKGKTTEAITKLMSMQAPTAVLLTFSEEDLNAGHFDDGAVSEE-EIPIELLQKGDILKVVPGERAP 702
            G RD+   ++D+G++  L + D   D L+R  EIQK++ K  + ++  IP L +A  F Y+   P + +L   I   L +  +I   LATPVQFW G  FY   + A +H  A ++ LVA+G+SAAYFY + ++V  +I P+F+G  FF+T+ LLITF++LG+YLE  AKGKT+EAI KL+S+QA +A++L+           D G V EE E+P+EL+QKGD+LKV PGE+ P
Sbjct:  132 GPRDLIKAISDVGYTANLSQQDVDIDRLQRTEEIQKWKTKFYNSLILTIPILLIAMFFAYVEVGPITEFLDIEIISNLGLDDVIELSLATPVQFWIGAEFYKKGYKAAKHKTATMDTLVALGTSAAYFYGIFAMVYMVINPAFEGEVFFETSALLITFIVLGKYLEASAKGKTSEAIKKLLSLQAKSAIVLSLD---------DKGKVIEETEVPLELIQKGDVLKVYPGEKIP 356          
BLAST of mRNA_M-pyrifera_M_contig91114.21122.1 vs. uniprot
Match: L8GVU0_ACACA (Coppertranslocating P-type ATPase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVU0_ACACA)

HSP 1 Score: 187 bits (474), Expect = 1.130e-50
Identity = 101/236 (42.80%), Postives = 153/236 (64.83%), Query Frame = 1
Query:    4 RTGARDVFAVLADLG-FSPKLVEADDRADNLRRRMEIQKYRRKVISCMVFAIPALFLAFGFRY-IPPFSGWLHRSIY-GGLTVLSLIMWILATPVQFWQGWTFYHHSFLALRHGYADINVLVAIGSSAAYFYSVISIVVSMITPSFQGTEFFDTAILLITFVLLGRYLENVAKGKTTEAITKLMSMQAPTAVLLTFSEEDLNAGHFDDGAVSEEEIPIELLQKGDILKVVPGERAP 702
            + G RDV  ++   G ++ +L   +   + L+R  EI+K+R    + + F  P +F++      I P    L +  +   L++ +++ W LATPVQFW GW FY  S+  L+HG A+++VLVA+G+SAAYFYSV+ IV+ ++  +F    +F+T+ LLITF++LGRYLENVAKGKT+EAITKL+S+QAPTA+LLT +      G ++   V E E+   L+Q+ D+LKV+PG   P
Sbjct:  525 KLGVRDVVELIERTGPYAAQLARPEGSVEALKREKEIRKWRLSFFASLAFTAPLVFISMVLSMLIEPTHEMLQQDYFVRNLSIDAVVQWALATPVQFWIGWDFYVASYKVLKHGSANMDVLVALGTSAAYFYSVLGIVLHLLDDNFTSHLYFETSALLITFIMLGRYLENVAKGKTSEAITKLLSLQAPTAILLTTTPAAATEGGYE--VVGEREVDANLVQRDDLLKVLPGAHIP 758          
BLAST of mRNA_M-pyrifera_M_contig91114.21122.1 vs. uniprot
Match: UPI000B8C6F19 (probable copper-transporting ATPase HMA5 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C6F19)

HSP 1 Score: 184 bits (467), Expect = 8.050e-50
Identity = 99/231 (42.86%), Postives = 143/231 (61.90%), Query Frame = 1
Query:    7 TGARDVFAVLADLG---FSPKLVEADDRADNLRRRMEIQKYRRKVISCMVFAIPALFLAFGFRYIPPFSGWLHRSIYGGLTVLSLIMWILATPVQFWQGWTFYHHSFLALRHGYADINVLVAIGSSAAYFYSVISIVVSMITPSFQGTEFFDTAILLITFVLLGRYLENVAKGKTTEAITKLMSMQAPTAVLLTFSEEDLNAGHFDDGAVSEEEIPIELLQKGDILKVVPG 690
            TG R+   V+   G   +   +           R+ EI++Y+R  +  +VF IP   +A  F YIP     L   +   L+V  +I WIL+TPVQF  GW FY  S+ ALRHG A+++VL+A+G++AAYFYS  S++ +  +P F GT+FF+T+ +LI+F+LLG+YLE +AKGKT+EAI KLM++   TA+LLT   E           VSEEEI   L+QK D++K++PG
Sbjct:  247 TGPRNFIRVIESTGSGRYKATIFPEGGGGRETHRQEEIKQYKRSFLWSLVFTIPVFLIAMIFMYIPGIKDGLETKVVNMLSVGEIIRWILSTPVQFIIGWRFYTGSYKALRHGSANMDVLIALGTNAAYFYSAYSVLRAATSPDFMGTDFFETSAMLISFILLGKYLEVLAKGKTSEAIAKLMNLTPETAILLTLDNEG--------NVVSEEEIDSRLIQKNDVVKILPG 469          
BLAST of mRNA_M-pyrifera_M_contig91114.21122.1 vs. uniprot
Match: A0A6P4BAX0_ZIZJJ (probable copper-transporting ATPase HMA5 n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4BAX0_ZIZJJ)

HSP 1 Score: 181 bits (460), Expect = 1.790e-49
Identity = 99/232 (42.67%), Postives = 142/232 (61.21%), Query Frame = 1
Query:    7 TGARDVFAVLADLG----FSPKLVEADDRADNLRRRMEIQKYRRKVISCMVFAIPALFLAFGFRYIPPFSGWLHRSIYGGLTVLSLIMWILATPVQFWQGWTFYHHSFLALRHGYADINVLVAIGSSAAYFYSVISIVVSMITPSFQGTEFFDTAILLITFVLLGRYLENVAKGKTTEAITKLMSMQAPTAVLLTFSEEDLNAGHFDDGAVSEEEIPIELLQKGDILKVVPG 690
            TG R    V+   G    F  K+           R+ EI++Y R  +  +VF +P    +  F YIP     L   +   LTV  ++ W+L+TPVQF  GW FY  S+ ALRHG A+++VL+A+G++AAYFYSV S++ +  +P F+GT+FF+T+ +LI+F+LLG+YLE +AKGKT++AI KLM +   TA LLT  EE           V+EEEI   L+QK D++KV+PG
Sbjct:  255 TGPRTFINVIETTGVSRRFKAKIFPDGGGGKGTHRKEEIKQYYRSFLWSLVFTVPVFLTSMVFMYIPGPKHGLETKVVNMLTVGEILRWVLSTPVQFIIGWRFYSGSYKALRHGSANMDVLIALGTNAAYFYSVYSVLRAATSPHFKGTDFFETSAMLISFILLGKYLEVLAKGKTSDAIAKLMDLTPETATLLTLDEEG--------NVVNEEEIDGRLIQKNDVIKVIPG 478          
BLAST of mRNA_M-pyrifera_M_contig91114.21122.1 vs. uniprot
Match: A0A446VAE5_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446VAE5_TRITD)

HSP 1 Score: 176 bits (447), Expect = 3.550e-49
Identity = 94/236 (39.83%), Postives = 143/236 (60.59%), Query Frame = 1
Query:    7 TGARDVFAVLADLGFSPKLVEAD----DRADNLRRRMEIQKYRRKVISCMVFAIPALFLAFGFRYIPPFSGWLHRSIYGGLTVLSLIMWILATPVQFWQGWTFYHHSFLALRHGYADINVLVAIGSSAAYFYSVISIVVSMITPSFQGTEFFDTAILLITFVLLGRYLENVAKGKTTEAITKLMSMQAPTAVLLTFSEEDLNAGHFDDGAVSEEEIPIELLQKGDILKVVPGERAP 702
            TG R +   + D    PK   A      +   + R  EI  YR + +   +F++P    A     +PP   WL   IY  +TV  L+ W+L +PVQF  GW FY  ++ AL+ GY++++VLVA+G++AAYFYSV  IV ++ + +F+G + F+T+ +L++F+LLG+YLE VAKGKT++A++KL  +   TAVLLT  +        D   +SE EI  +LLQ+ D +K+VPGE+ P
Sbjct:  228 TGPRLLIQRIQDAAEPPKCFNASLYSPPKQREVERHHEIMSYRNQFLWSCLFSVPVFLFAMVLPMLPPSGDWLFYKIYNNMTVGMLLRWLLCSPVQFIIGWRFYVGAYHALKRGYSNMDVLVALGTNAAYFYSVYIIVKALTSDTFEGQDLFETSSMLVSFILLGKYLEVVAKGKTSDALSKLTELAPETAVLLTLEK--------DGSVISEVEISTQLLQRNDFIKIVPGEKVP 455          
BLAST of mRNA_M-pyrifera_M_contig91114.21122.1 vs. uniprot
Match: UPI000B8CAB9D (probable copper-transporting ATPase HMA5 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CAB9D)

HSP 1 Score: 181 bits (460), Expect = 7.170e-49
Identity = 98/231 (42.42%), Postives = 144/231 (62.34%), Query Frame = 1
Query:    7 TGARDVFAVLADLG---FSPKLVEADDRADNLRRRMEIQKYRRKVISCMVFAIPALFLAFGFRYIPPFSGWLHRSIYGGLTVLSLIMWILATPVQFWQGWTFYHHSFLALRHGYADINVLVAIGSSAAYFYSVISIVVSMITPSFQGTEFFDTAILLITFVLLGRYLENVAKGKTTEAITKLMSMQAPTAVLLTFSEEDLNAGHFDDGAVSEEEIPIELLQKGDILKVVPG 690
            TG R+   V+  +    F   +           R+ EI++Y+   +  +VF IP    +  F YIP     L   +   L+V  +I WIL+TPVQF  GW FY  S+ ALRHG A+++VL+A+G++AAYFYS  S++ + I+P F+GT+FF+T+ +LI+F+LLG+YLE +AKGKT+EAI KLM++   TA+LLT  +E           +SEEEI   L+QK DI+K++PG
Sbjct:  247 TGPRNFIRVIESISSGHFKTTIFPEGGGGRENHRQEEIKQYKSSFLWSLVFTIPVFLTSMIFMYIPGIKEGLDTKVVNMLSVGEIIRWILSTPVQFIIGWRFYTGSYKALRHGSANMDVLIALGTNAAYFYSAYSVLRAAISPDFKGTDFFETSAMLISFILLGKYLEVLAKGKTSEAIAKLMNLTPDTAILLTLDDEG--------NVLSEEEIDSRLIQKNDIIKIIPG 469          
BLAST of mRNA_M-pyrifera_M_contig91114.21122.1 vs. uniprot
Match: W9QHE4_9ROSA (HMA3 protein n=4 Tax=Rosales TaxID=3744 RepID=W9QHE4_9ROSA)

HSP 1 Score: 181 bits (460), Expect = 7.230e-49
Identity = 99/231 (42.86%), Postives = 141/231 (61.04%), Query Frame = 1
Query:    7 TGARDVFAVLADLG---FSPKLVEADDRADNLRRRMEIQKYRRKVISCMVFAIPALFLAFGFRYIPPFSGWLHRSIYGGLTVLSLIMWILATPVQFWQGWTFYHHSFLALRHGYADINVLVAIGSSAAYFYSVISIVVSMITPSFQGTEFFDTAILLITFVLLGRYLENVAKGKTTEAITKLMSMQAPTAVLLTFSEEDLNAGHFDDGAVSEEEIPIELLQKGDILKVVPG 690
            TG R    V+   G   F   +    D      R+ EI++Y R  +  +VF IP    +  F YIP     L   +   L+V  +I W+L+TPVQF  GW FY  S+ ALRHG A+++VL+A+G++AAYFYSV S++ +  +P F+GT+FF+T+ +LI+F+LLG+YLE +AKGKT+EAI KLM +   TA LLT  EE            +EEEI   L+QK D++K++PG
Sbjct:  251 TGPRTFINVIETTGSRRFKATIFPEGDGGRETYRKDEIRQYYRSFMWSLVFTIPVFLTSMVFMYIPGIKNGLDTKVVNMLSVGEIIRWVLSTPVQFIIGWRFYAGSYKALRHGSANMDVLIALGTNAAYFYSVYSVLRAATSPHFKGTDFFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMDLAPETATLLTLDEEG--------NVTNEEEIDSRLIQKNDVIKIIPG 473          
BLAST of mRNA_M-pyrifera_M_contig91114.21122.1 vs. uniprot
Match: A0A0R0LL96_SOYBN (Uncharacterized protein n=10 Tax=Phaseoleae TaxID=163735 RepID=A0A0R0LL96_SOYBN)

HSP 1 Score: 179 bits (455), Expect = 2.420e-48
Identity = 98/231 (42.42%), Postives = 143/231 (61.90%), Query Frame = 1
Query:    7 TGARDVFAVLADLG---FSPKLVEADDRADNLRRRMEIQKYRRKVISCMVFAIPALFLAFGFRYIPPFSGWLHRSIYGGLTVLSLIMWILATPVQFWQGWTFYHHSFLALRHGYADINVLVAIGSSAAYFYSVISIVVSMITPSFQGTEFFDTAILLITFVLLGRYLENVAKGKTTEAITKLMSMQAPTAVLLTFSEEDLNAGHFDDGAVSEEEIPIELLQKGDILKVVPG 690
            TG R+   V+ + G   F  K+   ++   +  RR E ++Y R  +  +VF IP    +    Y+P     L   I   LTV  +  W+L+TPVQF  GW FY+ S+ ALR G A+++VL+A+G++AAYFYSV S++ +  +P F+G +FF+T+ +LI+F+LLG+YLE +AKGKT++AI KLM++   TAVLLT           D   V EEEI   L+QK D++KVVPG
Sbjct:  237 TGPRNFINVIHETGNGNFKAKIYPTEEGQRDSHRRQETKQYYRSFLWSLVFTIPVFLTSMVLMYVPGVKDSLDAKIVNMLTVGEVARWVLSTPVQFVLGWRFYYGSYKALRRGSANMDVLIALGTNAAYFYSVYSVLRAATSPHFEGNDFFETSAMLISFILLGKYLEILAKGKTSDAIAKLMNLTPDTAVLLTLDG--------DGSVVGEEEIDSRLVQKNDVIKVVPG 459          
BLAST of mRNA_M-pyrifera_M_contig91114.21122.1 vs. uniprot
Match: A0A7J8QQQ8_GOSRA (Uncharacterized protein n=10 Tax=Malvoideae TaxID=214907 RepID=A0A7J8QQQ8_GOSRA)

HSP 1 Score: 179 bits (455), Expect = 2.690e-48
Identity = 97/233 (41.63%), Postives = 145/233 (62.23%), Query Frame = 1
Query:    7 TGARDVFAVLADLGFSPKLV-----EADDRADNLRRRMEIQKYRRKVISCMVFAIPALFLAFGFRYIPPFSGWLHRSIYGGLTVLSLIMWILATPVQFWQGWTFYHHSFLALRHGYADINVLVAIGSSAAYFYSVISIVVSMITPSFQGTEFFDTAILLITFVLLGRYLENVAKGKTTEAITKLMSMQAPTAVLLTFSEEDLNAGHFDDGAVSEEEIPIELLQKGDILKVVPG 690
            TG R+   V+   G S +       E +      RR+ EI++Y R  +  ++F  P    +  F YIP     L   +   LT+  +I W+L+TPVQF  G  FY  S+ ALRHG A+++VL+A+G++AAYFYSV +++ +  +P F+GT+FF+T+ +LI+F+LLG+YLE +AKGKT+EAI KLM++   TA+LL+  EE           +SEEEI   L+QK DI+K++PG
Sbjct:  152 TGPRNFIKVIDSTGSSRRFKATIDPEGEGAGRESRRKEEIKQYFRSFLWSLIFTTPVFLTSMVFMYIPGIKHGLDTKVVNMLTIGEVIRWVLSTPVQFIIGRRFYTGSYKALRHGSANMDVLIALGTNAAYFYSVYTVIRAASSPDFEGTDFFETSAMLISFILLGKYLEVLAKGKTSEAIAKLMNLAPETAILLSLDEEG--------NVISEEEIDSRLIQKNDIIKIIPG 376          
BLAST of mRNA_M-pyrifera_M_contig91114.21122.1 vs. uniprot
Match: A0A453NLP0_AEGTS (Uncharacterized protein n=3 Tax=Triticinae TaxID=1648030 RepID=A0A453NLP0_AEGTS)

HSP 1 Score: 176 bits (447), Expect = 2.820e-48
Identity = 94/236 (39.83%), Postives = 143/236 (60.59%), Query Frame = 1
Query:    7 TGARDVFAVLADLGFSPKLVEAD----DRADNLRRRMEIQKYRRKVISCMVFAIPALFLAFGFRYIPPFSGWLHRSIYGGLTVLSLIMWILATPVQFWQGWTFYHHSFLALRHGYADINVLVAIGSSAAYFYSVISIVVSMITPSFQGTEFFDTAILLITFVLLGRYLENVAKGKTTEAITKLMSMQAPTAVLLTFSEEDLNAGHFDDGAVSEEEIPIELLQKGDILKVVPGERAP 702
            TG R +   + D    PK   A      +   + R  EI  YR + +   +F++P    A     +PP   WL   IY  +TV  L+ W+L +PVQF  GW FY  ++ AL+ GY++++VLVA+G++AAYFYSV  IV ++ + +F+G + F+T+ +L++F+LLG+YLE VAKGKT++A++KL  +   TAVLLT  +        D   +SE EI  +LLQ+ D +K+VPGE+ P
Sbjct:  234 TGPRLLIQRIQDAAEPPKCFNASLYSPPKQREVERHHEIMSYRNQFLWSCLFSVPVFLFAMVLPMLPPSGDWLFYKIYNNMTVGMLLRWLLCSPVQFIIGWRFYVGAYHALKRGYSNMDVLVALGTNAAYFYSVYIIVKALTSDTFEGQDLFETSSMLVSFILLGKYLEVVAKGKTSDALSKLTELAPETAVLLTLEK--------DGSVISEVEISTQLLQRNDFIKIVPGEKVP 461          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91114.21122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Q9NE60_HEILC2.920e-5144.02Copper-exporting P-type ATPase A n=1 Tax=Heimdalla... [more]
L8GVU0_ACACA1.130e-5042.80Coppertranslocating P-type ATPase n=1 Tax=Acantham... [more]
UPI000B8C6F198.050e-5042.86probable copper-transporting ATPase HMA5 n=1 Tax=C... [more]
A0A6P4BAX0_ZIZJJ1.790e-4942.67probable copper-transporting ATPase HMA5 n=1 Tax=Z... [more]
A0A446VAE5_TRITD3.550e-4939.83Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]
UPI000B8CAB9D7.170e-4942.42probable copper-transporting ATPase HMA5 n=1 Tax=C... [more]
W9QHE4_9ROSA7.230e-4942.86HMA3 protein n=4 Tax=Rosales TaxID=3744 RepID=W9QH... [more]
A0A0R0LL96_SOYBN2.420e-4842.42Uncharacterized protein n=10 Tax=Phaseoleae TaxID=... [more]
A0A7J8QQQ8_GOSRA2.690e-4841.63Uncharacterized protein n=10 Tax=Malvoideae TaxID=... [more]
A0A453NLP0_AEGTS2.820e-4839.83Uncharacterized protein n=3 Tax=Triticinae TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91114contigM-pyrifera_M_contig91114:80..781 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score183.3
Seed ortholog evalue1.3e-43
Seed eggNOG ortholog3649.evm.model.supercontig_74.17
Preferred nameHMA5
KEGG rclassRC00002
KEGG koko:K17686
KEGG TC3.A.3.5
KEGG ReactionR00086
KEGG Pathwayko01524,ko04016,map01524,map04016
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006950,GO:0008150,GO:0008324,GO:0009636,GO:0010035,GO:0010038,GO:0010273,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046688,GO:0046873,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0061687,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0090662,GO:0097501,GO:0098655,GO:0098660,GO:0098662,GO:0098754,GO:0099131,GO:0099132,GO:1990169
EggNOG free text desc.ATPase HMA5
EggNOG OGs37HKS@33090,3G7MY@35493,3HSG5@3699,COG2217@1,KOG0207@2759
EC3.6.3.54
COG Functional cat.P
Best tax levelBrassicales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size702
Cds size702
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816823.7255402-CDS-M-pyrifera_M_contig91114:79..7811622816823.7255402-CDS-M-pyrifera_M_contig91114:79..781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91114 80..781 +
1692278199.6385407-CDS-M-pyrifera_M_contig91114:79..7811692278199.6385407-CDS-M-pyrifera_M_contig91114:79..781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91114 80..781 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91114.21122.1prot_M-pyrifera_M_contig91114.21122.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91114 80..781 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91114.21122.1

>prot_M-pyrifera_M_contig91114.21122.1 ID=prot_M-pyrifera_M_contig91114.21122.1|Name=mRNA_M-pyrifera_M_contig91114.21122.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=234bp
NRTGARDVFAVLADLGFSPKLVEADDRADNLRRRMEIQKYRRKVISCMVF
AIPALFLAFGFRYIPPFSGWLHRSIYGGLTVLSLIMWILATPVQFWQGWT
FYHHSFLALRHGYADINVLVAIGSSAAYFYSVISIVVSMITPSFQGTEFF
DTAILLITFVLLGRYLENVAKGKTTEAITKLMSMQAPTAVLLTFSEEDLN
AGHFDDGAVSEEEIPIELLQKGDILKVVPGERAP
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mRNA from alignment at M-pyrifera_M_contig91114:80..781+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91114.21122.1 ID=mRNA_M-pyrifera_M_contig91114.21122.1|Name=mRNA_M-pyrifera_M_contig91114.21122.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig91114:80..781+ (Macrocystis pyrifera P11B4 male)
AACAGAACCGGTGCACGCGACGTTTTCGCCGTGCTGGCCGACCTTGGCTT CAGCCCCAAGCTTGTGGAGGCGGACGACAGGGCAGACAACCTGCGCAGAA GAATGGAGATCCAAAAGTATCGCAGGAAGGTGATTAGCTGCATGGTGTTT GCGATCCCTGCCCTGTTCCTCGCTTTTGGCTTTCGTTACATTCCACCATT CAGCGGTTGGCTCCACCGGTCGATTTACGGGGGCCTCACTGTGCTCAGCC TCATTATGTGGATATTGGCCACCCCTGTACAGTTCTGGCAGGGCTGGACC TTCTACCACCACAGCTTTCTTGCTCTCCGCCACGGCTATGCCGATATCAA CGTGCTGGTGGCGATTGGTTCCTCGGCTGCGTACTTCTACTCGGTCATTT CGATTGTGGTCTCTATGATCACTCCCTCCTTCCAAGGGACAGAGTTCTTT GACACTGCTATTCTCCTCATTACTTTCGTCTTGCTCGGTCGTTACCTCGA GAATGTGGCGAAGGGCAAGACCACTGAGGCGATCACGAAGCTGATGTCCA TGCAAGCACCTACCGCCGTTCTCCTCACGTTTTCCGAGGAAGACCTCAAC GCAGGCCACTTCGATGACGGAGCAGTGTCAGAAGAGGAGATCCCCATTGA ACTGCTTCAAAAGGGAGACATTCTCAAGGTGGTGCCCGGGGAGCGCGCCC CA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91114:80..781+

>mRNA_M-pyrifera_M_contig91114.21122.1 ID=mRNA_M-pyrifera_M_contig91114.21122.1|Name=mRNA_M-pyrifera_M_contig91114.21122.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1404bp|location=Sequence derived from alignment at M-pyrifera_M_contig91114:80..781+ (Macrocystis pyrifera P11B4 male)
AACAGAACCGGTGCACGCGACGTTTTCGCCGTGCTGGCCGACCTTGGCTT
CAGCCCCAAGCTTGTGGAGGCGGACGACAGGGCAGACAACCTGCGCAGAA
GAATGGAGATCCAAAAGTATCGCAGGAAGGTGATTAGCTGCATGGTGTTT
GCGATCCCTGCCCTGTTCCTCGCTTTTGGCTTTCGTTACATTCCACCATT
CAGCGGTTGGCTCCACCGGTCGATTTACGGGGGCCTCACTGTGCTCAGCC
TCATTATGTGGATATTGGCCACCCCTGTACAGTTCTGGCAGGGCTGGACC
TTCTACCACCACAGCTTTCTTGCTCTCCGCCACGGCTATGCCGATATCAA
CGTGCTGGTGGCGATTGGTTCCTCGGCTGCGTACTTCTACTCGGTCATTT
CGATTGTGGTCTCTATGATCACTCCCTCCTTCCAAGGGACAGAGTTCTTT
GACACTGCTATTCTCCTCATTACTTTCGTCTTGCTCGGTCGTTACCTCGA
GAATGTGGCGAAGGGCAAGACCACTGAGGCGATCACGAAGCTGATGTCCA
TGCAAGCACCTACCGCCGTTCTCCTCACGTTTTCCGAGGAAGACCTCAAC
GCAGGCCACTTCGATGACGGAGCAGTGTCAGAAGAGGAGATCCCCATTGA
ACTGCTTCAAAAGGGAGACATTCTCAAGGTGGTGCCCGGGGAGCGCGCCC
CAAACAGAACCGGTGCACGCGACGTTTTCGCCGTGCTGGCCGACCTTGGC
TTCAGCCCCAAGCTTGTGGAGGCGGACGACAGGGCAGACAACCTGCGCAG
AAGAATGGAGATCCAAAAGTATCGCAGGAAGGTGATTAGCTGCATGGTGT
TTGCGATCCCTGCCCTGTTCCTCGCTTTTGGCTTTCGTTACATTCCACCA
TTCAGCGGTTGGCTCCACCGGTCGATTTACGGGGGCCTCACTGTGCTCAG
CCTCATTATGTGGATATTGGCCACCCCTGTACAGTTCTGGCAGGGCTGGA
CCTTCTACCACCACAGCTTTCTTGCTCTCCGCCACGGCTATGCCGATATC
AACGTGCTGGTGGCGATTGGTTCCTCGGCTGCGTACTTCTACTCGGTCAT
TTCGATTGTGGTCTCTATGATCACTCCCTCCTTCCAAGGGACAGAGTTCT
TTGACACTGCTATTCTCCTCATTACTTTCGTCTTGCTCGGTCGTTACCTC
GAGAATGTGGCGAAGGGCAAGACCACTGAGGCGATCACGAAGCTGATGTC
CATGCAAGCACCTACCGCCGTTCTCCTCACGTTTTCCGAGGAAGACCTCA
ACGCAGGCCACTTCGATGACGGAGCAGTGTCAGAAGAGGAGATCCCCATT
GAACTGCTTCAAAAGGGAGACATTCTCAAGGTGGTGCCCGGGGAGCGCGC
CCCA
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