mRNA_M-pyrifera_M_contig91108.21119.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91108.21119.1
Unique NamemRNA_M-pyrifera_M_contig91108.21119.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91108.21119.1 vs. uniprot
Match: A0A3D5DBH6_9GAMM (Molybdopterin molybdenumtransferase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DBH6_9GAMM)

HSP 1 Score: 144 bits (363), Expect = 1.960e-40
Identity = 68/92 (73.91%), Postives = 80/92 (86.96%), Query Frame = 1
Query:    1 ILLFGASAIVDRGDVIPAAIEHAGGRISHFGMPVEPGNMLLLGRLGNVDVVGLPGCARSPKLNGFDWVLERLFAALPLSSEEIASMGVGGLI 276
            ILLFGASAIVDRGDVIP+AI  AGG++++FGMPVEPGNMLLLG +  V+ VGLPGCARSPK NGFDWVL+RLFA L +  ++IA MGVGGL+
Sbjct:  216 ILLFGASAIVDRGDVIPSAILEAGGKVTYFGMPVEPGNMLLLGSIDKVNAVGLPGCARSPKFNGFDWVLQRLFAGLSVDGKDIAKMGVGGLL 307          
BLAST of mRNA_M-pyrifera_M_contig91108.21119.1 vs. uniprot
Match: A0A2D7JK46_9PROT (4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D7JK46_9PROT)

HSP 1 Score: 144 bits (362), Expect = 1.400e-38
Identity = 61/92 (66.30%), Postives = 80/92 (86.96%), Query Frame = 1
Query:    1 ILLFGASAIVDRGDVIPAAIEHAGGRISHFGMPVEPGNMLLLGRLGNVDVVGLPGCARSPKLNGFDWVLERLFAALPLSSEEIASMGVGGLI 276
            +L+ GASA+VDR D++PAAIEHAGG++ HFGMPV+PGN++L GR+G +  +GLPGCARSPKLNGFDWVL+R+ A +PL S+EI SMG+GG +
Sbjct:  232 VLISGASAVVDRRDIVPAAIEHAGGQVEHFGMPVDPGNLMLFGRIGKIPAIGLPGCARSPKLNGFDWVLQRVVAGVPLGSKEIMSMGLGGFL 323          
BLAST of mRNA_M-pyrifera_M_contig91108.21119.1 vs. uniprot
Match: UPI00047DE737 (molybdopterin-binding/glycosyltransferase family 2 protein n=1 Tax=Fodinicurvata fenggangensis TaxID=1121830 RepID=UPI00047DE737)

HSP 1 Score: 143 bits (361), Expect = 1.950e-38
Identity = 65/92 (70.65%), Postives = 80/92 (86.96%), Query Frame = 1
Query:    1 ILLFGASAIVDRGDVIPAAIEHAGGRISHFGMPVEPGNMLLLGRLGNVDVVGLPGCARSPKLNGFDWVLERLFAALPLSSEEIASMGVGGLI 276
            +L+ GASAI+DR D IPAAIE AGG++ HFGMPV+PGN+LLL  +G +DV+GLPGCARSPKLNGFDWVL+RL A LP++ E+IA MGVGGL+
Sbjct:  232 LLVSGASAIIDRKDTIPAAIEQAGGQVRHFGMPVDPGNLLLLAEIGGIDVIGLPGCARSPKLNGFDWVLQRLCADLPIAPEDIAGMGVGGLL 323          
BLAST of mRNA_M-pyrifera_M_contig91108.21119.1 vs. uniprot
Match: A0A1Z8VHM3_9PROT (NTP_transf_3 domain-containing protein n=2 Tax=Rhodospirillaceae TaxID=41295 RepID=A0A1Z8VHM3_9PROT)

HSP 1 Score: 142 bits (359), Expect = 3.980e-38
Identity = 65/92 (70.65%), Postives = 79/92 (85.87%), Query Frame = 1
Query:    1 ILLFGASAIVDRGDVIPAAIEHAGGRISHFGMPVEPGNMLLLGRLGNVDVVGLPGCARSPKLNGFDWVLERLFAALPLSSEEIASMGVGGLI 276
            IL+ GASA+VDR DV+PAAIEHAGG+I HFGMPV+PGN+LLLG +  +DVVG+PGCARSPKLNGFDWVL+RL A +P+ S +I  MG GGL+
Sbjct:  231 ILISGASAVVDRRDVVPAAIEHAGGKIRHFGMPVDPGNLLLLGSINGIDVVGIPGCARSPKLNGFDWVLQRLLANIPVESVDIMRMGSGGLL 322          
BLAST of mRNA_M-pyrifera_M_contig91108.21119.1 vs. uniprot
Match: A0A2D6TAH2_9PROT (4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6TAH2_9PROT)

HSP 1 Score: 141 bits (355), Expect = 1.350e-37
Identity = 67/92 (72.83%), Postives = 77/92 (83.70%), Query Frame = 1
Query:    1 ILLFGASAIVDRGDVIPAAIEHAGGRISHFGMPVEPGNMLLLGRLGNVDVVGLPGCARSPKLNGFDWVLERLFAALPLSSEEIASMGVGGLI 276
            ILLFGASAIVDR DVIPAAIE AGG + HFGMPV+PGN+LLLGRLG   VVGLPGCARSPKLNGFDWVL+RL A L +   ++ ++G GGL+
Sbjct:  231 ILLFGASAIVDRRDVIPAAIERAGGSVDHFGMPVDPGNLLLLGRLGATPVVGLPGCARSPKLNGFDWVLQRLLAGLAVVRSDLTALGAGGLL 322          
BLAST of mRNA_M-pyrifera_M_contig91108.21119.1 vs. uniprot
Match: A0A8G2BLX9_9PROT (Molybdenum cofactor cytidylyltransferase n=2 Tax=Thalassobaculum TaxID=526215 RepID=A0A8G2BLX9_9PROT)

HSP 1 Score: 141 bits (355), Expect = 1.500e-37
Identity = 63/92 (68.48%), Postives = 79/92 (85.87%), Query Frame = 1
Query:    1 ILLFGASAIVDRGDVIPAAIEHAGGRISHFGMPVEPGNMLLLGRLGNVDVVGLPGCARSPKLNGFDWVLERLFAALPLSSEEIASMGVGGLI 276
            +L+ GASA+VDR DV+PAAIE AGG + HFGMPV+PGN++L+GR+G++ VVGLPGCARSPKLNGFDWVL+RL A +P+   EI  MGVGGL+
Sbjct:  231 VLVSGASAVVDRRDVVPAAIEQAGGIVEHFGMPVDPGNLMLIGRIGDIPVVGLPGCARSPKLNGFDWVLQRLIAGVPVGRAEIGRMGVGGLL 322          
BLAST of mRNA_M-pyrifera_M_contig91108.21119.1 vs. uniprot
Match: A0A2E6Y0S9_9HYPH (4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Stappia sp. TaxID=1870903 RepID=A0A2E6Y0S9_9HYPH)

HSP 1 Score: 140 bits (353), Expect = 2.750e-37
Identity = 63/93 (67.74%), Postives = 79/93 (84.95%), Query Frame = 1
Query:    1 ILLFGASAIVDRGDVIPAAIEHAGGRISHFGMPVEPGNMLLLGRLGNVDVVGLPGCARSPKLNGFDWVLERLFAALPLSSEEIASMGVGGLIV 279
            +L+FGASAIVDRGDVIPAAIEHAGG ++HFGMPV+PGN+LL+G +  V V+G PGCARSP  NGFDWVL+RL A LP++  +I  +GVGGL++
Sbjct:  228 LLVFGASAIVDRGDVIPAAIEHAGGTVAHFGMPVDPGNLLLVGEIDGVPVIGAPGCARSPSENGFDWVLDRLMADLPVTEADITGLGVGGLLM 320          
BLAST of mRNA_M-pyrifera_M_contig91108.21119.1 vs. uniprot
Match: K2KE10_9PROT (MoCF_biosynth domain-containing protein n=2 Tax=Oceanibaculum indicum TaxID=526216 RepID=K2KE10_9PROT)

HSP 1 Score: 140 bits (352), Expect = 3.440e-37
Identity = 63/92 (68.48%), Postives = 78/92 (84.78%), Query Frame = 1
Query:    1 ILLFGASAIVDRGDVIPAAIEHAGGRISHFGMPVEPGNMLLLGRLGNVDVVGLPGCARSPKLNGFDWVLERLFAALPLSSEEIASMGVGGLI 276
            +LLFGASA+VDR DV+PAAI  AGG + HFGMPV+PGN+LLLG +G+  V+G+PGCARSPKLNGFDWVL+RL A LP++  +I  MGVGGL+
Sbjct:  227 VLLFGASAVVDRRDVLPAAIVEAGGTVDHFGMPVDPGNLLLLGHIGDTPVIGMPGCARSPKLNGFDWVLQRLVAGLPVTRTDIMRMGVGGLL 318          
BLAST of mRNA_M-pyrifera_M_contig91108.21119.1 vs. uniprot
Match: E2CEI5_9HYPH (4-diphosphocytidyl-2C-methyl-D-erythritol synthase n=1 Tax=Roseibium sp. TrichSKD4 TaxID=744980 RepID=E2CEI5_9HYPH)

HSP 1 Score: 140 bits (352), Expect = 3.550e-37
Identity = 62/93 (66.67%), Postives = 80/93 (86.02%), Query Frame = 1
Query:    1 ILLFGASAIVDRGDVIPAAIEHAGGRISHFGMPVEPGNMLLLGRLGNVDVVGLPGCARSPKLNGFDWVLERLFAALPLSSEEIASMGVGGLIV 279
            ++LFGASA+VDR DV+P AIEHAGGRI HFGMPV+PGN+LLL  L +V V+G PGCARSPK NGFDW+L+R+ A +P++S++I  MGVGGL++
Sbjct:  233 LILFGASAVVDRQDVLPTAIEHAGGRILHFGMPVDPGNLLLLADLDDVSVIGAPGCARSPKENGFDWILDRVLAKIPVASDDITQMGVGGLLM 325          
BLAST of mRNA_M-pyrifera_M_contig91108.21119.1 vs. uniprot
Match: D5RR54_9PROT (Molybdopterin molybdenumtransferase (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 TaxID=525371 RepID=D5RR54_9PROT)

HSP 1 Score: 136 bits (342), Expect = 4.890e-37
Identity = 64/92 (69.57%), Postives = 76/92 (82.61%), Query Frame = 1
Query:    1 ILLFGASAIVDRGDVIPAAIEHAGGRISHFGMPVEPGNMLLLGRLGNVDVVGLPGCARSPKLNGFDWVLERLFAALPLSSEEIASMGVGGLI 276
            +L+ GASA+VDR D  PAAI  AGG I HFGMPV+PGN+L LGR+G +  + LPGCARSPKLNGFDWVL+RLFA LP++S EIA MGVGGL+
Sbjct:  230 LLIAGASAVVDRRDAGPAAITRAGGTIEHFGMPVDPGNLLCLGRIGEIPALVLPGCARSPKLNGFDWVLQRLFAGLPVASAEIARMGVGGLL 321          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91108.21119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DBH6_9GAMM1.960e-4073.91Molybdopterin molybdenumtransferase (Fragment) n=1... [more]
A0A2D7JK46_9PROT1.400e-3866.304-diphosphocytidyl-2C-methyl-D-erythritol kinase n... [more]
UPI00047DE7371.950e-3870.65molybdopterin-binding/glycosyltransferase family 2... [more]
A0A1Z8VHM3_9PROT3.980e-3870.65NTP_transf_3 domain-containing protein n=2 Tax=Rho... [more]
A0A2D6TAH2_9PROT1.350e-3772.834-diphosphocytidyl-2C-methyl-D-erythritol kinase n... [more]
A0A8G2BLX9_9PROT1.500e-3768.48Molybdenum cofactor cytidylyltransferase n=2 Tax=T... [more]
A0A2E6Y0S9_9HYPH2.750e-3767.744-diphosphocytidyl-2C-methyl-D-erythritol kinase n... [more]
K2KE10_9PROT3.440e-3768.48MoCF_biosynth domain-containing protein n=2 Tax=Oc... [more]
E2CEI5_9HYPH3.550e-3766.674-diphosphocytidyl-2C-methyl-D-erythritol synthase... [more]
D5RR54_9PROT4.890e-3769.57Molybdopterin molybdenumtransferase (Fragment) n=1... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91108contigM-pyrifera_M_contig91108:501..782 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score147.1
Seed ortholog evalue4e-33
Seed eggNOG ortholog570967.JMLV01000001_gene2702
KEGG koko:K07141
KEGG ReactionR11582
KEGG Pathwayko00790,map00790
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Probable molybdopterin binding domain
EggNOG OGs1MW0X@1224,2JPR6@204441,2TR5D@28211,COG2068@1,COG2068@2
EC2.7.7.76
COG Functional cat.H
Best tax levelRhodospirillales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size282
Cds size282
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816823.6016138-CDS-M-pyrifera_M_contig91108:500..7821622816823.6016138-CDS-M-pyrifera_M_contig91108:500..782Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91108 501..782 -
1692278199.5708292-CDS-M-pyrifera_M_contig91108:500..7821692278199.5708292-CDS-M-pyrifera_M_contig91108:500..782Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91108 501..782 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91108.21119.1prot_M-pyrifera_M_contig91108.21119.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91108 501..782 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91108.21119.1

>prot_M-pyrifera_M_contig91108.21119.1 ID=prot_M-pyrifera_M_contig91108.21119.1|Name=mRNA_M-pyrifera_M_contig91108.21119.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp
ILLFGASAIVDRGDVIPAAIEHAGGRISHFGMPVEPGNMLLLGRLGNVDV
VGLPGCARSPKLNGFDWVLERLFAALPLSSEEIASMGVGGLIV*
back to top

mRNA from alignment at M-pyrifera_M_contig91108:501..782-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91108.21119.1 ID=mRNA_M-pyrifera_M_contig91108.21119.1|Name=mRNA_M-pyrifera_M_contig91108.21119.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=282bp|location=Sequence derived from alignment at M-pyrifera_M_contig91108:501..782- (Macrocystis pyrifera P11B4 male)
ATCCTGTTATTCGGCGCCTCGGCGATCGTCGACCGGGGTGATGTGATTCC CGCGGCGATCGAGCACGCGGGTGGCCGCATCAGCCATTTCGGCATGCCCG TGGAACCCGGCAATATGCTGTTACTCGGACGTCTCGGAAACGTCGACGTC GTCGGGCTGCCGGGCTGTGCGCGTTCGCCGAAGCTGAACGGCTTCGACTG GGTGCTGGAGCGCCTGTTTGCGGCGCTGCCGCTTTCAAGCGAGGAAATCG CGTCGATGGGGGTCGGCGGACTGATCGTTTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig91108:501..782-

>mRNA_M-pyrifera_M_contig91108.21119.1 ID=mRNA_M-pyrifera_M_contig91108.21119.1|Name=mRNA_M-pyrifera_M_contig91108.21119.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig91108:501..782- (Macrocystis pyrifera P11B4 male)
ATCCTGTTATTCGGCGCCTCGGCGATCGTCGACCGGGGTGATGTGATTCC
CGCGGCGATCGAGCACGCGGGTGGCCGCATCAGCCATTTCGGCATGCCCG
TGGAACCCGGCAATATGCTGTTACTCGGACGTCTCGGAAACGTCGACGTC
GTCGGGCTGCCGGGCTGTGCGCGTTCGCCGAAGCTGAACGGCTTCGACTG
GGTGCTGGAGCGCCTGTTTGCGGCGCTGCCGCTTTCAAGCGAGGAAATCG
CGTCGATGGGGGTCGGCGGACTGATCGTTTGAATCCTGTTATTCGGCGCC
TCGGCGATCGTCGACCGGGGTGATGTGATTCCCGCGGCGATCGAGCACGC
GGGTGGCCGCATCAGCCATTTCGGCATGCCCGTGGAACCCGGCAATATGC
TGTTACTCGGACGTCTCGGAAACGTCGACGTCGTCGGGCTGCCGGGCTGT
GCGCGTTCGCCGAAGCTGAACGGCTTCGACTGGGTGCTGGAGCGCCTGTT
TGCGGCGCTGCCGCTTTCAAGCGAGGAAATCGCGTCGATGGGGGTCGGCG
GACTGATCGTTTGA
back to top