mRNA_M-pyrifera_M_contig9109.21117.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9109.21117.1
Unique NamemRNA_M-pyrifera_M_contig9109.21117.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig9109.21117.1 vs. uniprot
Match: D7G1F0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F0_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.340e-58
Identity = 99/135 (73.33%), Postives = 113/135 (83.70%), Query Frame = 1
Query:    1 IESDDELPFACLICRQGFRDPVVTNCGHYFCEQCAQDHYKTDPRCAACGKQTQGVFNVAKKLTEKMRKKGLVTRKDLGSASGVXXXXXXXXXXXXXXXXXXDSDYEIREDGVQLTGTGMVRKKTGTWATVTPADN 405
            +ESDD+LPFACLICRQGF DP+VTNCGHYFCE+CAQ+HYKT+PRCAACGKQTQGVFN AKKLTEK+RKKG+VTRK+   A+G XXXXXX            DSDYEIREDGVQLT T +VR+KTGTWATVT  ++
Sbjct:  284 VESDDDLPFACLICRQGFVDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEKLRKKGMVTRKEQAGAAGXXXXXXXDEGGG-------DSDYEIREDGVQLTETDVVRRKTGTWATVTTEED 411          
BLAST of mRNA_M-pyrifera_M_contig9109.21117.1 vs. uniprot
Match: A0A836CP80_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP80_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.590e-30
Identity = 68/130 (52.31%), Postives = 83/130 (63.85%), Query Frame = 1
Query:    1 IESDDELPFACLICRQGFRDPVVTNCGHYFCEQCAQDHYKTDPRCAACGKQTQGVFNVAKKLTEKMRKKGLVTRKDLGSASGVXXXXXXXXXXXXXXXXXXDSDYEIREDGVQLTGTGMVRKKTGTWATV 390
            ++ D +LPFAC ICR+ FRDPVVTNCGH+FCE CA D+YK   RCAACGKQT GVFN A++L E M KKGLV                      XXXXXXX  ++ +RE+ V+LT   +V K+ G W TV
Sbjct:  262 VDEDGDLPFACFICREAFRDPVVTNCGHHFCEACAMDNYKRSTRCAACGKQTGGVFNFARRLVEHMAKKGLVKA-------------------GXXXXXXXXXEFAVREE-VELTAKSVVTKQQGGWQTV 371          
BLAST of mRNA_M-pyrifera_M_contig9109.21117.1 vs. uniprot
Match: A0A6V1N7Z0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N7Z0_HETAK)

HSP 1 Score: 112 bits (281), Expect = 2.060e-27
Identity = 47/67 (70.15%), Postives = 55/67 (82.09%), Query Frame = 1
Query:    1 IESDDELPFACLICRQGFRDPVVTNCGHYFCEQCAQDHYKTDPRCAACGKQTQGVFNVAKKLTEKMR 201
            I+SDDELPFAC ICR+ F  PV T CGHYFCE+CA +HYKTD RCA CGKQT G+FN AKK+ E+M+
Sbjct:  213 IDSDDELPFACHICREDFEQPVATLCGHYFCEECALEHYKTDKRCAICGKQTSGIFNQAKKIVERMK 279          
BLAST of mRNA_M-pyrifera_M_contig9109.21117.1 vs. uniprot
Match: A0A8H7RE19_9FUNG (Pre-mRNA-splicing factor CWC24 n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7RE19_9FUNG)

HSP 1 Score: 106 bits (265), Expect = 3.580e-25
Identity = 51/82 (62.20%), Postives = 60/82 (73.17%), Query Frame = 1
Query:    4 ESDDELPFACLICRQGFRDPVVTNCGHYFCEQCAQDHYKTDPRCAACGKQTQGVFNVAKKLTEKMRKKGLVTRKDLGSASGV 249
            +SDDELPFACLICR+ F++PVVT C HYFCE CA  +YK  P+C ACGK TQGVFN AKK+ EK+  K    R+D G  S V
Sbjct:  218 DSDDELPFACLICREEFKNPVVTRCEHYFCEACAIKNYKKSPKCYACGKPTQGVFNTAKKMLEKLELKK--KRQDEGKDSDV 297          
BLAST of mRNA_M-pyrifera_M_contig9109.21117.1 vs. uniprot
Match: A0A0B7MVZ9_9FUNG (Pre-mRNA-splicing factor CWC24 n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7MVZ9_9FUNG)

HSP 1 Score: 103 bits (258), Expect = 4.850e-24
Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 1
Query:    7 SDDELPFACLICRQGFRDPVVTNCGHYFCEQCAQDHYKTDPRCAACGKQTQGVFNVAKKLTEKMRKKGLVTRKDLGSASGV 249
             DDELPFACLICRQ F DPVVT CGHYFCE CA  +Y+  P+C ACG  TQGVFN AKK+  K+ +K    R+D+  +S V
Sbjct:  234 DDDELPFACLICRQEFTDPVVTRCGHYFCETCAIKNYQKSPKCFACGAPTQGVFNTAKKMLAKLAEKK--KRQDVDKSSDV 312          
BLAST of mRNA_M-pyrifera_M_contig9109.21117.1 vs. uniprot
Match: A0A8H7R028_9FUNG (Pre-mRNA-splicing factor CWC24 n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7R028_9FUNG)

HSP 1 Score: 103 bits (256), Expect = 1.060e-23
Identity = 49/79 (62.03%), Postives = 56/79 (70.89%), Query Frame = 1
Query:    7 SDDELPFACLICRQGFRDPVVTNCGHYFCEQCAQDHYKTDPRCAACGKQTQGVFNVAKKLTEKMRKKGLVTRKDLGSAS 243
             DDELPFACLICRQ F DPVVT CGHYFCE CA  +Y+  P+C ACG  TQGVFN AKK+  K+ +K    +K LG  S
Sbjct:  241 DDDELPFACLICRQEFTDPVVTRCGHYFCETCAIKNYQKSPKCFACGAPTQGVFNTAKKMLAKLAEK----KKRLGDNS 315          
BLAST of mRNA_M-pyrifera_M_contig9109.21117.1 vs. uniprot
Match: A0A1X2HJ51_SYNRA (Pre-mRNA-splicing factor CWC24 n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HJ51_SYNRA)

HSP 1 Score: 102 bits (254), Expect = 1.150e-23
Identity = 41/68 (60.29%), Postives = 55/68 (80.88%), Query Frame = 1
Query:    4 ESDDELPFACLICRQGFRDPVVTNCGHYFCEQCAQDHYKTDPRCAACGKQTQGVFNVAKKLTEKMRKK 207
            +SD+ELPFACL+CR+ F++PVVT CGHYFCE+CA DH +T P+C ACG  T GVF  AK + +++R+K
Sbjct:  193 DSDEELPFACLLCREEFKEPVVTKCGHYFCEKCAIDHQRTSPKCYACGASTGGVFTTAKNMLKRLREK 260          
BLAST of mRNA_M-pyrifera_M_contig9109.21117.1 vs. uniprot
Match: A0A367KLW3_RHIST (Pre-mRNA-splicing factor CWC24 n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KLW3_RHIST)

HSP 1 Score: 102 bits (255), Expect = 1.160e-23
Identity = 45/68 (66.18%), Postives = 53/68 (77.94%), Query Frame = 1
Query:    4 ESDDELPFACLICRQGFRDPVVTNCGHYFCEQCAQDHYKTDPRCAACGKQTQGVFNVAKKLTEKMRKK 207
            +SD+ELPFACLICR+ F +PVVT C HYFCE CA  +YK  P+C ACG  TQGVFN AKK+ EK+ KK
Sbjct:  222 DSDEELPFACLICREEFVNPVVTRCNHYFCEACAIRNYKESPKCFACGAPTQGVFNTAKKILEKLHKK 289          
BLAST of mRNA_M-pyrifera_M_contig9109.21117.1 vs. uniprot
Match: A0A8H7PJQ2_9FUNG (Pre-mRNA-splicing factor CWC24 n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PJQ2_9FUNG)

HSP 1 Score: 102 bits (255), Expect = 1.190e-23
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 1
Query:    4 ESDDELPFACLICRQGFRDPVVTNCGHYFCEQCAQDHYKTDPRCAACGKQTQGVFNVAKKLTEKMRKKGLVTRKD 228
            +SDDELPFACLICRQ F +P+VT CGHYFCE+CA  HY   P+C ACG  T G+FN AK L  K+ +K    +K+
Sbjct:  228 DSDDELPFACLICRQEFTNPIVTKCGHYFCEKCAIKHYTKSPKCFACGASTNGIFNTAKNLIAKIEEKRAEDKKN 302          
BLAST of mRNA_M-pyrifera_M_contig9109.21117.1 vs. uniprot
Match: A0A8H7S6V7_9FUNG (Pre-mRNA-splicing factor CWC24 n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S6V7_9FUNG)

HSP 1 Score: 102 bits (254), Expect = 2.750e-23
Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 1
Query:    7 SDDELPFACLICRQGFRDPVVTNCGHYFCEQCAQDHYKTDPRCAACGKQTQGVFNVAKKLTEKMRKK 207
             ++ELPFACLICR+ F +PVVT C HYFCE+CA D+YK  P+C ACG  T GVFN AK + EK+RKK
Sbjct:  245 DEEELPFACLICREEFTNPVVTKCNHYFCEKCALDNYKKSPKCYACGSPTSGVFNTAKNMLEKLRKK 311          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9109.21117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1F0_ECTSI1.340e-5873.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CP80_9STRA2.590e-3052.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1N7Z0_HETAK2.060e-2770.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8H7RE19_9FUNG3.580e-2562.20Pre-mRNA-splicing factor CWC24 n=1 Tax=Mucor satur... [more]
A0A0B7MVZ9_9FUNG4.850e-2460.49Pre-mRNA-splicing factor CWC24 n=1 Tax=Parasitella... [more]
A0A8H7R028_9FUNG1.060e-2362.03Pre-mRNA-splicing factor CWC24 n=1 Tax=Mucor plumb... [more]
A0A1X2HJ51_SYNRA1.150e-2360.29Pre-mRNA-splicing factor CWC24 n=1 Tax=Syncephalas... [more]
A0A367KLW3_RHIST1.160e-2366.18Pre-mRNA-splicing factor CWC24 n=1 Tax=Rhizopus st... [more]
A0A8H7PJQ2_9FUNG1.190e-2358.67Pre-mRNA-splicing factor CWC24 n=1 Tax=Umbelopsis ... [more]
A0A8H7S6V7_9FUNG2.750e-2364.18Pre-mRNA-splicing factor CWC24 n=1 Tax=Mucor circi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9109contigM-pyrifera_M_contig9109:8474..11292 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score196.4
Seed ortholog evalue8.5e-48
Seed eggNOG ortholog2880.D7G1F0
Preferred nameRNF113A
KEGG koko:K03661,ko:K13127,ko:K15696
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04142,ko04145,ko04721,ko05110,ko05120,ko05152,ko05323,map00190,map01100,map04142,map04145,map04721,map05110,map05120,map05152,map05323
KEGG ModuleM00160
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008270,GO:0008380,GO:0009987,GO:0010467,GO:0010468,GO:0016020,GO:0016070,GO:0016071,GO:0016074,GO:0016567,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0022008,GO:0030154,GO:0030182,GO:0031323,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0034247,GO:0034470,GO:0034641,GO:0034660,GO:0036211,GO:0043144,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043484,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0046872,GO:0046914,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070647,GO:0071704,GO:0080090,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1990904
EggNOG free text desc.snoRNA splicing
EggNOG OGsCOG5152@1,KOG1813@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041,ko04121
Exons2
Model size411
Cds size411
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816823.525318-CDS-M-pyrifera_M_contig9109:8473..87311622816823.525318-CDS-M-pyrifera_M_contig9109:8473..8731Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9109 8474..8731 -
1692278199.5274866-CDS-M-pyrifera_M_contig9109:8473..87311692278199.5274866-CDS-M-pyrifera_M_contig9109:8473..8731Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9109 8474..8731 -
1622816823.5366576-CDS-M-pyrifera_M_contig9109:11139..112921622816823.5366576-CDS-M-pyrifera_M_contig9109:11139..11292Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9109 11140..11292 -
1692278199.5408487-CDS-M-pyrifera_M_contig9109:11139..112921692278199.5408487-CDS-M-pyrifera_M_contig9109:11139..11292Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9109 11140..11292 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9109.21117.1prot_M-pyrifera_M_contig9109.21117.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9109 8474..11292 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9109.21117.1

>prot_M-pyrifera_M_contig9109.21117.1 ID=prot_M-pyrifera_M_contig9109.21117.1|Name=mRNA_M-pyrifera_M_contig9109.21117.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
IESDDELPFACLICRQGFRDPVVTNCGHYFCEQCAQDHYKTDPRCAACGK
QTQGVFNVAKKLTEKMRKKGLVTRKDLGSASGVGGDEAGGGADGGGGGDG
GDSDYEIREDGVQLTGTGMVRKKTGTWATVTPADNG*
back to top

mRNA from alignment at M-pyrifera_M_contig9109:8474..11292-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9109.21117.1 ID=mRNA_M-pyrifera_M_contig9109.21117.1|Name=mRNA_M-pyrifera_M_contig9109.21117.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2819bp|location=Sequence derived from alignment at M-pyrifera_M_contig9109:8474..11292- (Macrocystis pyrifera P11B4 male)
ATAGAGAGCGACGACGAGCTGCCTTTCGCGTGTCTCATCTGCAGGCAAGG TTTTCGCGATCCGGTCGTGACGAACTGCGGCCATTACTTCTGCGAGCAGT GTGCCCAGGACCACTACAAAACCGACCCGCGCTGCGCGGCCTGCGGCAAG CAGGTGACGGCCAGGGGGGAGGGGTGTGTGTGTACTTTTTTTTTTTTTCA CGTGTTGGGCTTTTGTCAAGGCCTCTTCTGGCCTTGTACTATTTTTTTTT AACTTGAGGGCGCGGTCAGCCAAGCGGTCAAACCGCGGTCTCGTGCGGTA AACAGGTGACGGTCAATCCCTGGTCTATTCCTTATTATGCTGGTTTGAGT GTAAGAAGGCGGTTCGTCAAGCGATCAAACCGCGGCCTCGTGCGAGAAAC AAGTGACGATCAAGCCCTATCGGTTCCTTGTTTAGTTGGTTCGAGTGCAA GAGGGCTGTCAGTCAAGCGGTCAAACCGCGGTCCCGTGCGAGAAACAAGT GACGGTCAAGGCCTATTTTGTCTATTATGATGCTGGGTGCATATTATGCT GGAGTCAGTCTAGGGGGGCTGTCAATTACAGGGAAGCTCATCACCTGTTC GAGATTTGGTTCAATTAGCTTAGGGTCAGGGTTAGGATTGCTCTGATTGG CTTAGGCCTGGGGTTGCAGCTTTAGGGTTAGTTCTGTTCGTTTCGTACAC AGTGTGTGTCAACCATGTTCTCGAATAAGTGGTTAAGCTACCCTCGTCAG TCAAAAGGGGTCAAGCCGCGGGCTCGCGCGGGAAACAGGTGACTTCGGCC AAGGCCTCTTCTTGCCCTAACATGCTGACTTGAGTGTACGGGGACGGTCA GTCAAGCCTTCAAACCGCGGTAAAACAGGTGACGGTCACGGCCTGTTCTG GGCGCGTCATTTCCTGTTTTGGCCTTTTCCTGCTGATTTTTTGTGTACGG GAGCGGTCAGTCAACAAGGTCAAACCGCGGTCTCCTGTTCGATAGCGCGT CAAGGCCTTCCCTCGCCTGGTTTTTCTACTACCGGGGACCATAGTAGTCA GGACCCACCATATACACACCGACCTATATACTATAGTATAGTATGTTTTA CCAAACACTTTTAGTTCTGATTACTGCAGTCCCGTATTCGCTTTTTTGCG GGGGACCATAGTAAATAGGACCTACGGTACACACAAACACCTATATATTT ACCTATTTTACCTACAATATTTGGTCCTGTTAACTATGCTCCCCCGTAAT GGTGGGTTTTGATGTGACGAGGTTCGTTTCCCTCCTTCTCGCAACGCCTT TTTGTGGGACTCTCTCTTTTCCCGATTCTCGACGCCGATAAACATGCCTT CCAAGTATATGTGTTTTTTGCCTAGCCCGTGTCCCGAACACAGCGGCGAC TTTTAGGAGTCTTCTCCAGGCAATATACGCCCATGACGTAGACGAGAATA TTAACGGTAGTTTTGTTTTATTCTTATTTACTTGCCTGCTTTTTATTTTG TTTTTTTTGTCAAGTTCTGGTTTTCGTTTGTTTTGTTTTGTTTTGTTCCG TTCTGTTTTTTGTTTTATTCTTGGTTGTGTTGTGTTGTGTTTTGTTTCTG TTTTAGTTTTTTGTGTTGTGTTTTGTTTTGTTTCTGTTGTTTCTGGTGTC GTGTTTCGTTCGTATTTTTGCGCGTGTTGTTTGTTTTTTTGTCTGTAGTC GTCGGTGCGTTTGTATGTTTTCGTTGTAATTTGTGTGGTTGCTCCTTCGT GTTTGGTTTATTGATTGATTTTTTTTTTTTGTCGTATTTTGGCGTCCACT CACTGGTTGTTGTGGTTTTGACGGACCATGTGCACCCCGCGGCCTGTAGT CGCCTCTACGGCAGCAGTCAGTCTCCACCAGCCTAGACGGACCGAGAGGC TTGTCTGCCTGCTATGTATTCGTCGCTCTAGCGAGTGAGAGCGGCTGAAC TGCTGAAAATCCTTCACTATCATGCAACTCTGTCCGGAAAAGTGCGGACG GGTCGAACACTAACAGCGACACCCGAACCACCCTTACATTCCCGGACAGA TTGGTAGTAAAATTAATATTGGTACTACGGGGGACCATAGTAAATAGGAC TAAATTTTGTCAGTAAAAACAGGTAAATATATACCAGTAGGTTTTTGTGT ATACCGTAGGTCCTATTTATTATTGTTCCCCGTAATAGTTCACCTTTTCT TTTTAAGTCGTCAGACAACGTGCTGCTGATGTTGTCGTCGGGCAGTGGTG GTCAGACCGAATGAGATCGAGCATGCAGCTGTTCTGGTACGTAGCAACAC CGATCTGTAGGGACGTAGTGTTCGATACATTTTGGAGCAGTGGTAGAACA GTAGTAGTAGCCGGTAGCCAGTAGCCAGCGAAATGTAAACTCCGCCACAC TCCCCTCGATCACGGAGACCCAGACATTTTGCTCAACCCCAGCAACCAAT CAACCACCCCCCCCCCCGCCCCCCTCCCCCACCCCGCCCACCCGGTGACA TCCCACCCCGCTTTTGGGCCACACCCACTTTGTCCTCGCCCTCTCGCTCT CAACGTCTCAGACACAGGGGGTGTTCAATGTGGCAAAAAAGCTGACCGAA AAAATGCGGAAGAAAGGACTGGTCACTCGGAAGGATCTCGGCTCGGCGAG TGGAGTTGGTGGAGACGAAGCAGGCGGTGGTGCTGACGGGGGGGGAGGGG GGGACGGCGGCGACAGTGACTACGAGATCCGAGAAGATGGGGTGCAATTG ACGGGGACGGGAATGGTGCGGAAAAAAACGGGAACGTGGGCAACGGTAAC ACCCGCGGACAATGGTTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig9109:8474..11292-

>mRNA_M-pyrifera_M_contig9109.21117.1 ID=mRNA_M-pyrifera_M_contig9109.21117.1|Name=mRNA_M-pyrifera_M_contig9109.21117.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig9109:8474..11292- (Macrocystis pyrifera P11B4 male)
ATAGAGAGCGACGACGAGCTGCCTTTCGCGTGTCTCATCTGCAGGCAAGG
TTTTCGCGATCCGGTCGTGACGAACTGCGGCCATTACTTCTGCGAGCAGT
GTGCCCAGGACCACTACAAAACCGACCCGCGCTGCGCGGCCTGCGGCAAG
CAGATAGAGAGCGACGACGAGCTGCCTTTCGCGTGTCTCATCTGCAGGCA
AGGTTTTCGCGATCCGGTCGTGACGAACTGCGGCCATTACTTCTGCGAGC
AGTGTGCCCAGGACCACTACAAAACCGACCCGCGCTGCGCGGCCTGCGGC
AAGCAGACACAGGGGGTGTTCAATGTGGCAAAAAAGCTGACCGAAAAAAT
GCGGAAGAAAGGACTGGTCACTCGGAAGGATCTCGGCTCGGCGAGTGGAG
TTGGTGGAGACGAAGCAGGCGGTGGTGCTGACGGGGGGGGAGGGGGGGAC
GGCGGCGACAGTGACTACGAGATCCGAGAAGATGGGGTGCAATTGACGGG
GACGGGAATGGTGCGGAAAAAAACGGGAACGTGGGCAACGGTAACACCCG
CGGACAATGGTTGAACACAGGGGGTGTTCAATGTGGCAAAAAAGCTGACC
GAAAAAATGCGGAAGAAAGGACTGGTCACTCGGAAGGATCTCGGCTCGGC
GAGTGGAGTTGGTGGAGACGAAGCAGGCGGTGGTGCTGACGGGGGGGGAG
GGGGGGACGGCGGCGACAGTGACTACGAGATCCGAGAAGATGGGGTGCAA
TTGACGGGGACGGGAATGGTGCGGAAAAAAACGGGAACGTGGGCAACGGT
AACACCCGCGGACAATGGTTGA
back to top