mRNA_M-pyrifera_M_contig91071.21115.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91071.21115.1
Unique NamemRNA_M-pyrifera_M_contig91071.21115.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91071.21115.1 vs. uniprot
Match: A0A6I6A7L6_9PLAN (YicC family protein n=13 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A7L6_9PLAN)

HSP 1 Score: 500 bits (1287), Expect = 5.040e-178
Identity = 257/261 (98.47%), Postives = 260/261 (99.62%), Query Frame = 1
Query:    1 NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNRKSVYLLDDQVVQQYWEQLKKLTEECHLPLPDSLDRLLTLPGAVIDNDSRTHTPESDWPLIEEAIKGALIELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAPQVVTSYRDRLHQRLTDLLKDQEVELDPDSMIREVSLFADRCDINEEISRLTCHLEQFDTILNSDTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN 783
            NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNR+SVYLLDDQVVQQYWEQLKKLTEECHLPLPDSLDRLLTLPGAVIDNDSRTHTPESDWPLIEEAIKGAL+ELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAPQVVTSYRDRLHQRLTDLLKDQEVELDPDS+IREVSLFADRCDINEEISRLTCHLEQFDTILNS TSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN
Sbjct:   29 NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNRQSVYLLDDQVVQQYWEQLKKLTEECHLPLPDSLDRLLTLPGAVIDNDSRTHTPESDWPLIEEAIKGALVELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAPQVVTSYRDRLHQRLTDLLKDQEVELDPDSLIREVSLFADRCDINEEISRLTCHLEQFDTILNSKTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN 289          
BLAST of mRNA_M-pyrifera_M_contig91071.21115.1 vs. uniprot
Match: A6CEM6_9PLAN (Uncharacterized protein n=12 Tax=Planctomycetaceae TaxID=126 RepID=A6CEM6_9PLAN)

HSP 1 Score: 427 bits (1099), Expect = 2.190e-149
Identity = 215/261 (82.38%), Postives = 243/261 (93.10%), Query Frame = 1
Query:    1 NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNRKSVYLLDDQVVQQYWEQLKKLTEECHLPLPDSLDRLLTLPGAVIDNDSRTHTPESDWPLIEEAIKGALIELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAPQVVTSYRDRLHQRLTDLLKDQEVELDPDSMIREVSLFADRCDINEEISRLTCHLEQFDTILNSDTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN 783
            NRYLK+S+RYPDFYAKLGSQIEKL+RS+++RGTVNLTLRID L+R S YLLD++V++QYWEQLK L+E CH PLP+ +D LLTLPGA IDN SR+HTPESDWPLIE+AI+GAL ELTEFR+KEGESAQADL+SSN+ I +QLE VK+KAP+VVT+YRDRLHQRL DLLKDQEVELDPDS+IREVS+FADRCDINEEISRL CHLEQFD+I+ S TSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN
Sbjct:   29 NRYLKVSSRYPDFYAKLGSQIEKLIRSSVSRGTVNLTLRIDSLDRTSDYLLDEEVIKQYWEQLKHLSEACHTPLPNHVDSLLTLPGAAIDNYSRSHTPESDWPLIEQAIRGALQELTEFRKKEGESAQADLESSNQIIRQQLEVVKEKAPRVVTNYRDRLHQRLADLLKDQEVELDPDSLIREVSMFADRCDINEEISRLGCHLEQFDSIITSKTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN 289          
BLAST of mRNA_M-pyrifera_M_contig91071.21115.1 vs. uniprot
Match: A0A517RDV2_9PLAN (Uncharacterized protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A517RDV2_9PLAN)

HSP 1 Score: 422 bits (1085), Expect = 2.570e-147
Identity = 215/261 (82.38%), Postives = 240/261 (91.95%), Query Frame = 1
Query:    1 NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNRKSVYLLDDQVVQQYWEQLKKLTEECHLPLPDSLDRLLTLPGAVIDNDSRTHTPESDWPLIEEAIKGALIELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAPQVVTSYRDRLHQRLTDLLKDQEVELDPDSMIREVSLFADRCDINEEISRLTCHLEQFDTILNSDTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN 783
            NRYLKISTRYPDFYAKLGSQIEKLLR +ITRGTVNLTL+ID L+R S YLLD++V+QQYW QLK LTE CHLPLPD+++ LL+LPGA IDN SR+H+PE+DWPLI++AI+GAL ELTEFR+ EGESAQADL +SN+ I +QLE VKQKAP VVTSYRDRLHQRL+DLL+DQEVELDPDS+IREVSLFADRCDINEEI+RL CHLEQFDTI+   TSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN
Sbjct:   25 NRYLKISTRYPDFYAKLGSQIEKLLRGSITRGTVNLTLKIDSLDRTSDYLLDEKVIQQYWSQLKHLTEVCHLPLPDNINSLLSLPGAAIDNYSRSHSPEADWPLIQQAIQGALTELTEFRKTEGESAQADLLASNQIICDQLEIVKQKAPLVVTSYRDRLHQRLSDLLQDQEVELDPDSLIREVSLFADRCDINEEITRLKCHLEQFDTIITGKTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN 285          
BLAST of mRNA_M-pyrifera_M_contig91071.21115.1 vs. uniprot
Match: A0A517WWH3_9PLAN (Uncharacterized protein n=4 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WWH3_9PLAN)

HSP 1 Score: 418 bits (1075), Expect = 8.570e-146
Identity = 212/261 (81.23%), Postives = 242/261 (92.72%), Query Frame = 1
Query:    1 NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNRKSVYLLDDQVVQQYWEQLKKLTEECHLPLPDSLDRLLTLPGAVIDNDSRTHTPESDWPLIEEAIKGALIELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAPQVVTSYRDRLHQRLTDLLKDQEVELDPDSMIREVSLFADRCDINEEISRLTCHLEQFDTILNSDTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN 783
            NRYLKISTRYPDFYAKLGSQIEK LRS+ITRGTVNLTL+I+HL+R S YLLD++VV+QYWEQLK +T+ CHLPLPD L+ LL+LPGAV+DNDS++HTPESDWPLIE+A++ AL +LTEFR+KEGESAQADL +SN+ I EQL+ VK+ AP+VVT+YRDRLHQRL+DLL+DQEV+LD DS+IREVSLFADR DINEE+SRL CHLEQFDTILN  TSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN
Sbjct:   25 NRYLKISTRYPDFYAKLGSQIEKQLRSSITRGTVNLTLKINHLDRTSDYLLDEEVVKQYWEQLKNITQACHLPLPDDLNSLLSLPGAVLDNDSKSHTPESDWPLIEQALREALEDLTEFRKKEGESAQADLLASNQIICEQLKIVKEIAPRVVTNYRDRLHQRLSDLLEDQEVDLDSDSLIREVSLFADRSDINEELSRLDCHLEQFDTILNGSTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN 285          
BLAST of mRNA_M-pyrifera_M_contig91071.21115.1 vs. uniprot
Match: A0A2D6SXP1_9PLAN (YicC family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SXP1_9PLAN)

HSP 1 Score: 264 bits (675), Expect = 5.790e-85
Identity = 135/261 (51.72%), Postives = 184/261 (70.50%), Query Frame = 1
Query:    1 NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNRKSVYLLDDQVVQQYWEQLKKLTEECHLPLPDSLDRLLTLPGAVIDNDSRTHTPESDWPLIEEAIKGALIELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAPQVVTSYRDRLHQRLTDLLKDQEVELDPDSMIREVSLFADRCDINEEISRLTCHLEQFDTILNSDTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN 783
            NRYLKIS+R PD Y    S+IEK+ R +ITRGTV + +RI+ +     Y LD  V+  YW  L + ++   L  P   +RLL LPG V++++ +T     +WP++E+A+  AL +L  FR +EG + + DL ++ + IG+QLE ++ +APQVV  YR ++H+R+   L + +V L+   ++REVS+FADRCDINEEI RL CHLEQF+T L  + S G+KLEFL QEMFREINTIGSKANDVEI+H V+EMK AVEKIREN
Sbjct:   29 NRYLKISSRLPDAYGPFESRIEKVARESITRGTVQIAVRIEQVGVDRRYKLDRSVLDAYWHDLCRWSQTQGLATPSCGERLLELPGVVVEDNFQTVDIAEEWPIVEQALLEALEKLKGFRIEEGRAMRDDLAANGRRIGKQLELIRGRAPQVVAEYRSKMHERVKTFLSEADVTLESSDLLREVSIFADRCDINEEIQRLQCHLEQFETFLGDEQSLGRKLEFLSQEMFREINTIGSKANDVEIAHGVVEMKAAVEKIREN 289          
BLAST of mRNA_M-pyrifera_M_contig91071.21115.1 vs. uniprot
Match: A0A3B1D1D4_9ZZZZ (UPF0701 protein YloC n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1D1D4_9ZZZZ)

HSP 1 Score: 252 bits (643), Expect = 4.030e-80
Identity = 136/261 (52.11%), Postives = 177/261 (67.82%), Query Frame = 1
Query:    1 NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNRKSVYLLDDQVVQQYWEQLKKLTEECHLPLPDSLDRLLTLPGAVIDNDSRTHTPESDWPLIEEAIKGALIELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAPQVVTSYRDRLHQRLTDLLKDQEVELDPDSMIREVSLFADRCDINEEISRLTCHLEQFDTILNSDTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN 783
            NRYLKI+ +  +  + L ++I+KLLR +I RGTV++ +R+D L     Y L+ Q +Q YW QL  L+E  H+P    L  LL LPG + +   ++   +  W  ++E +K AL  LTEFRQ EG +A+ DL+   KTI   LE V Q APQVV +YRDR   R+T+LL   +V LD   +IREVS+FADRCDINEEI+RL  HLEQF   LN + SQG+KL+FL QEM RE+NTIGSKAN V I+H V++MK AVEKIREN
Sbjct:   29 NRYLKIAIKTDNAISLLENRIDKLLRESIARGTVSVAIRMDRLKAGKKYRLNQQTLQSYWTQLHDLSESLHVPARADLAALLDLPGVIEEETHQSIDTDDIWTFLQECLKEALATLTEFRQAEGNAAETDLRLQLKTIQTNLEQVTQLAPQVVETYRDRTLARVTELLAKSDVNLDAAHLIREVSIFADRCDINEEITRLQSHLEQFGLFLNQEKSQGRKLDFLTQEMNREVNTIGSKANHVGIAHHVVDMKAAVEKIREN 289          
BLAST of mRNA_M-pyrifera_M_contig91071.21115.1 vs. uniprot
Match: A0A517Z9A2_9PLAN (Uncharacterized protein n=2 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z9A2_9PLAN)

HSP 1 Score: 250 bits (638), Expect = 1.960e-79
Identity = 128/260 (49.23%), Postives = 186/260 (71.54%), Query Frame = 1
Query:    1 NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNRKSVYLLDDQVVQQYWEQLKKLTEECHLPLPDSLDRLLTLPGAVIDNDSRTHTPESDWPLIEEAIKGALIELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAPQVVTSYRDRLHQRLTDLLKDQEVELDPDSMIREVSLFADRCDINEEISRLTCHLEQFDTILNSDTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIRE 780
            NR+LKI+TR PD Y  L S++EK++R +ITRGTV + +RID L  +S Y LD   V  YW QL+++ ++ H+  P  L  LL LPG V ++ SRT TPE D  L+ +A++ AL  L EFR +EG++ + +L+    TI    E ++ +APQ+V +YR +L +R+ +LL+   +++    ++REVSLFADRCDI EE++RL CH++QF   L+S+ S G++LEFL QE+FREINTIGSKANDVEI+H V+++K ++EKIRE
Sbjct:   25 NRHLKITTRCPDAYLTLESEVEKIVRRSITRGTVTVHVRIDRLAGQSPYALDVDAVSHYWTQLRQVADKLHVAPPADLSPLLALPGVVSEDSSRTLTPE-DGKLVHDALETALATLGEFRVREGKAMRDELEQQCLTIQNLTEGIRDRAPQIVDAYRTKLLERVNELLRSSNMDITDADIVREVSLFADRCDITEELTRLHCHIDQFRGTLDSEASMGRRLEFLCQELFREINTIGSKANDVEIAHTVVDVKASIEKIRE 283          
BLAST of mRNA_M-pyrifera_M_contig91071.21115.1 vs. uniprot
Match: A0A1I3CE20_9PLAN (TIGR00255 family protein n=1 Tax=Planctomicrobium piriforme TaxID=1576369 RepID=A0A1I3CE20_9PLAN)

HSP 1 Score: 247 bits (631), Expect = 2.250e-78
Identity = 129/260 (49.62%), Postives = 184/260 (70.77%), Query Frame = 1
Query:    1 NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNRKSVYLLDDQVVQQYWEQLKKLTEECHLPLPDSLDRLLTLPGAVIDNDSRTHTPESDWPLIEEAIKGALIELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAPQVVTSYRDRLHQRLTDLLKDQEVELDPDSMIREVSLFADRCDINEEISRLTCHLEQFDTILNSDTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIRE 780
            NR+LK++ R PD +  L + I++++R  I+RGT+ + L I H+N  S Y ++  V +QY+EQL++L+ E  L  P  L  LL LPG + D +SR+   ESDWPL+E A+  AL  L  FR++EG +  A+L++    I E  E +  +AP+VV  YR+R+  R+ D L  Q V++D + +IREVS+FADRCDI+EE++RL  HL+Q+ T+L+SD S G+KLEFL QE+FREINT GSKANDVEI+H V+EMK A+EK+RE
Sbjct:   25 NRHLKVTVRCPDAFIALEANIDRVVREVISRGTLTIHLHIRHVNALSSYHVNSTVARQYFEQLRELSRELGLAEPAELTPLLALPGVIDDGESRS-VEESDWPLLETALITALENLQNFRRQEGAAMAAELRAMCLVIEENAEQIALRAPKVVAEYRERIKNRINDFLSTQSVKVDDNDLIREVSMFADRCDISEELTRLRSHLQQYRTLLDSDGSNGRKLEFLGQELFREINTTGSKANDVEIAHRVVEMKAAIEKMRE 283          
BLAST of mRNA_M-pyrifera_M_contig91071.21115.1 vs. uniprot
Match: A0A2E0SK71_9PLAN (YicC family protein n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E0SK71_9PLAN)

HSP 1 Score: 246 bits (627), Expect = 9.960e-78
Identity = 127/263 (48.29%), Postives = 178/263 (67.68%), Query Frame = 1
Query:    1 NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNRKSVYLLDDQVVQQYWEQLKKLTEECH--LPLPDSLDRLLTLPGAVIDNDSRTHTPESDWPLIEEAIKGALIELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAPQVVTSYRDRLHQRLTDLLKDQEVELDPDSMIREVSLFADRCDINEEISRLTCHLEQFDTILNSDTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN 783
            NRY K+S + PD YA+    IE+++R  I RGTV + + +  L  ++ Y L +   Q+YW Q ++LT +      +P  L     LPG V +      +   +W +IE+ ++ AL +L  FR+KEGES ++DL++S + +  +LETV+Q+AP VV+ YR R+  RL +LL DQ V ++   +IREV +F DRCDINEEISRL  HL QF++ L+S+ S G+KLEFL QEMFRE+NTIGSKAND+ ISHAV+EMK AVE+IREN
Sbjct:   25 NRYFKLSLKSPDSYARYEGDIERVVREVIRRGTVQIAIGVQRLQTEARYELAEPAFQEYWNQYQQLTTKLQGVSDVPPPLSAFFQLPGVVQEKPQAEESNNEEWDVIEKCLRLALAKLQTFREKEGESIRSDLRNSCQLVHRELETVEQRAPLVVSEYRSRMLSRLEELLNDQGVTIEASDIIREVGIFTDRCDINEEISRLKSHLSQFESFLSSEESMGRKLEFLCQEMFREVNTIGSKANDITISHAVVEMKAAVERIREN 287          
BLAST of mRNA_M-pyrifera_M_contig91071.21115.1 vs. uniprot
Match: A0A518CKT2_9PLAN (Uncharacterized protein n=2 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CKT2_9PLAN)

HSP 1 Score: 239 bits (610), Expect = 4.190e-75
Identity = 123/265 (46.42%), Postives = 178/265 (67.17%), Query Frame = 1
Query:    1 NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNRKSVYLLDDQVVQQYWEQLKKLTEECHLP-LPD---SLDRLLTLPGAVIDNDSRTHTPESDWPLIEEAIKGALIELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAPQVVTSYRDRLHQRLTDLLKDQEVELDPDSMIREVSLFADRCDINEEISRLTCHLEQFDTILNSDTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIEMKLAVEKIREN 783
            NRY K+S + PD YA+    IE+++R  I RGTV + + +  +  +S Y  ++  +Q+YW Q +KL  +  LP +PD   +L     LPG + +          +W +IE+ ++ AL +L  FR+KEGES + DL +S K +  +LETV+++AP VV+ YR R+  RL ++L +Q V ++   +IREV +F DRCDINEEISRL  HL QF++ L+ + S G+KLEFL QEMFRE+NTIGSKAND+ ISHAV+EMK +VE++REN
Sbjct:   29 NRYFKLSLKSPDSYARYEGDIERVVREVIRRGTVQIAISVQQMQEESRYEFNEPALQEYWNQYRKLASD--LPGVPDESPALSSFFQLPGIIREKPQAEEISTEEWNVIEKCLRQALSKLQTFREKEGESIRQDLGNSCKVVRRELETVEERAPLVVSEYRSRMLSRLDEVLSEQSVTIEASDIIREVGIFTDRCDINEEISRLKSHLNQFESFLSKEESMGRKLEFLSQEMFREVNTIGSKANDITISHAVVEMKASVERVREN 291          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91071.21115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6A7L6_9PLAN5.040e-17898.47YicC family protein n=13 Tax=Gimesia TaxID=1649453... [more]
A6CEM6_9PLAN2.190e-14982.38Uncharacterized protein n=12 Tax=Planctomycetaceae... [more]
A0A517RDV2_9PLAN2.570e-14782.38Uncharacterized protein n=4 Tax=Gimesia TaxID=1649... [more]
A0A517WWH3_9PLAN8.570e-14681.23Uncharacterized protein n=4 Tax=Gimesia aquarii Ta... [more]
A0A2D6SXP1_9PLAN5.790e-8551.72YicC family protein n=1 Tax=Planctomycetaceae bact... [more]
A0A3B1D1D4_9ZZZZ4.030e-8052.11UPF0701 protein YloC n=1 Tax=hydrothermal vent met... [more]
A0A517Z9A2_9PLAN1.960e-7949.23Uncharacterized protein n=2 Tax=Maioricimonas rari... [more]
A0A1I3CE20_9PLAN2.250e-7849.62TIGR00255 family protein n=1 Tax=Planctomicrobium ... [more]
A0A2E0SK71_9PLAN9.960e-7848.29YicC family protein n=1 Tax=Planctomyces sp. TaxID... [more]
A0A518CKT2_9PLAN4.190e-7546.42Uncharacterized protein n=2 Tax=Polystyrenella lon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91071contigM-pyrifera_M_contig91071:1..783 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score432.2
Seed ortholog evalue1.7e-118
Seed eggNOG ortholog344747.PM8797T_01624
Preferred nameyicC
KEGG koko:K03316
KEGG TC2.A.36
Hectar predicted targeting categoryother localisation
EggNOG free text desc.stress-induced protein
EggNOG OGs2IYZH@203682,COG1561@1,COG1561@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size783
Cds size783
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816823.4490216-CDS-M-pyrifera_M_contig91071:0..7831622816823.4490216-CDS-M-pyrifera_M_contig91071:0..783Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91071 1..783 -
1692278199.4938557-CDS-M-pyrifera_M_contig91071:0..7831692278199.4938557-CDS-M-pyrifera_M_contig91071:0..783Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91071 1..783 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91071.21115.1prot_M-pyrifera_M_contig91071.21115.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91071 1..783 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91071.21115.1

>prot_M-pyrifera_M_contig91071.21115.1 ID=prot_M-pyrifera_M_contig91071.21115.1|Name=mRNA_M-pyrifera_M_contig91071.21115.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=261bp
NRYLKISTRYPDFYAKLGSQIEKLLRSAITRGTVNLTLRIDHLNRKSVYL
LDDQVVQQYWEQLKKLTEECHLPLPDSLDRLLTLPGAVIDNDSRTHTPES
DWPLIEEAIKGALIELTEFRQKEGESAQADLQSSNKTIGEQLETVKQKAP
QVVTSYRDRLHQRLTDLLKDQEVELDPDSMIREVSLFADRCDINEEISRL
TCHLEQFDTILNSDTSQGKKLEFLVQEMFREINTIGSKANDVEISHAVIE
MKLAVEKIREN
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mRNA from alignment at M-pyrifera_M_contig91071:1..783-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91071.21115.1 ID=mRNA_M-pyrifera_M_contig91071.21115.1|Name=mRNA_M-pyrifera_M_contig91071.21115.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig91071:1..783- (Macrocystis pyrifera P11B4 male)
AATCGATACCTGAAAATTTCGACCCGCTACCCCGACTTCTATGCCAAGCT GGGCAGCCAGATCGAAAAACTGTTACGCAGTGCCATTACGCGAGGCACTG TGAATCTGACGTTGCGAATCGATCACCTGAACCGTAAAAGCGTCTATCTG CTCGACGATCAGGTAGTCCAGCAGTACTGGGAGCAGCTCAAAAAGCTGAC AGAGGAATGCCATCTTCCCCTGCCAGACAGTCTCGACAGACTACTCACTC TGCCTGGCGCCGTAATCGATAATGATTCACGTACACACACTCCCGAATCG GACTGGCCCCTGATCGAAGAGGCCATCAAAGGGGCTCTTATCGAACTGAC CGAGTTTCGTCAGAAAGAAGGTGAATCTGCCCAGGCAGACCTGCAGTCCA GCAACAAGACGATCGGCGAACAACTGGAAACGGTCAAACAGAAAGCGCCT CAGGTCGTCACCAGCTATCGCGACCGCCTGCATCAGCGATTGACCGATTT ACTCAAAGATCAGGAAGTCGAACTGGATCCGGACAGCATGATCCGGGAAG TAAGCCTGTTTGCCGACCGCTGTGATATCAACGAAGAGATCAGCCGACTC ACCTGCCACCTGGAGCAATTTGACACCATTCTGAACAGTGATACCTCGCA AGGGAAAAAACTCGAGTTTCTGGTTCAGGAAATGTTTCGCGAAATCAATA CGATCGGCTCCAAAGCCAATGATGTGGAAATTTCACACGCTGTGATCGAG ATGAAACTGGCCGTTGAAAAAATCAGAGAAAAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91071:1..783-

>mRNA_M-pyrifera_M_contig91071.21115.1 ID=mRNA_M-pyrifera_M_contig91071.21115.1|Name=mRNA_M-pyrifera_M_contig91071.21115.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1566bp|location=Sequence derived from alignment at M-pyrifera_M_contig91071:1..783- (Macrocystis pyrifera P11B4 male)
AATCGATACCTGAAAATTTCGACCCGCTACCCCGACTTCTATGCCAAGCT
GGGCAGCCAGATCGAAAAACTGTTACGCAGTGCCATTACGCGAGGCACTG
TGAATCTGACGTTGCGAATCGATCACCTGAACCGTAAAAGCGTCTATCTG
CTCGACGATCAGGTAGTCCAGCAGTACTGGGAGCAGCTCAAAAAGCTGAC
AGAGGAATGCCATCTTCCCCTGCCAGACAGTCTCGACAGACTACTCACTC
TGCCTGGCGCCGTAATCGATAATGATTCACGTACACACACTCCCGAATCG
GACTGGCCCCTGATCGAAGAGGCCATCAAAGGGGCTCTTATCGAACTGAC
CGAGTTTCGTCAGAAAGAAGGTGAATCTGCCCAGGCAGACCTGCAGTCCA
GCAACAAGACGATCGGCGAACAACTGGAAACGGTCAAACAGAAAGCGCCT
CAGGTCGTCACCAGCTATCGCGACCGCCTGCATCAGCGATTGACCGATTT
ACTCAAAGATCAGGAAGTCGAACTGGATCCGGACAGCATGATCCGGGAAG
TAAGCCTGTTTGCCGACCGCTGTGATATCAACGAAGAGATCAGCCGACTC
ACCTGCCACCTGGAGCAATTTGACACCATTCTGAACAGTGATACCTCGCA
AGGGAAAAAACTCGAGTTTCTGGTTCAGGAAATGTTTCGCGAAATCAATA
CGATCGGCTCCAAAGCCAATGATGTGGAAATTTCACACGCTGTGATCGAG
ATGAAACTGGCCGTTGAAAAAATCAGAGAAAACAATCGATACCTGAAAAT
TTCGACCCGCTACCCCGACTTCTATGCCAAGCTGGGCAGCCAGATCGAAA
AACTGTTACGCAGTGCCATTACGCGAGGCACTGTGAATCTGACGTTGCGA
ATCGATCACCTGAACCGTAAAAGCGTCTATCTGCTCGACGATCAGGTAGT
CCAGCAGTACTGGGAGCAGCTCAAAAAGCTGACAGAGGAATGCCATCTTC
CCCTGCCAGACAGTCTCGACAGACTACTCACTCTGCCTGGCGCCGTAATC
GATAATGATTCACGTACACACACTCCCGAATCGGACTGGCCCCTGATCGA
AGAGGCCATCAAAGGGGCTCTTATCGAACTGACCGAGTTTCGTCAGAAAG
AAGGTGAATCTGCCCAGGCAGACCTGCAGTCCAGCAACAAGACGATCGGC
GAACAACTGGAAACGGTCAAACAGAAAGCGCCTCAGGTCGTCACCAGCTA
TCGCGACCGCCTGCATCAGCGATTGACCGATTTACTCAAAGATCAGGAAG
TCGAACTGGATCCGGACAGCATGATCCGGGAAGTAAGCCTGTTTGCCGAC
CGCTGTGATATCAACGAAGAGATCAGCCGACTCACCTGCCACCTGGAGCA
ATTTGACACCATTCTGAACAGTGATACCTCGCAAGGGAAAAAACTCGAGT
TTCTGGTTCAGGAAATGTTTCGCGAAATCAATACGATCGGCTCCAAAGCC
AATGATGTGGAAATTTCACACGCTGTGATCGAGATGAAACTGGCCGTTGA
AAAAATCAGAGAAAAC
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