mRNA_M-pyrifera_M_contig91050.21108.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig91050.21108.1 vs. uniprot
Match: A0A2E7KCC1_9PLAN (General stress protein CsbD n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KCC1_9PLAN) HSP 1 Score: 271 bits (693), Expect = 1.260e-90 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1 Query: 1 HLRHFEFRILFQENNSAEFDYNSKERDMVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAARATEKLGENFENTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKNPVESVAVAFGTGLIAGVIVSLVWRR 528 HLRHFEFRILFQENNSAEFDYNSKERDMVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAARATEKLGENFENTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKNPVESVAVAFGTGLIAGVIVSLVWRR Sbjct: 13 HLRHFEFRILFQENNSAEFDYNSKERDMVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAARATEKLGENFENTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKNPVESVAVAFGTGLIAGVIVSLVWRR 188
BLAST of mRNA_M-pyrifera_M_contig91050.21108.1 vs. uniprot
Match: A0A6I6A8R4_9PLAN (DUF883 family protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A8R4_9PLAN) HSP 1 Score: 208 bits (530), Expect = 2.230e-66 Identity = 141/149 (94.63%), Postives = 142/149 (95.30%), Query Frame = 1 Query: 82 MVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAARATEKLGENFENTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKNPVESVAVAFGTGLIAGVIVSLVWRR 528 MVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAA+ATEKLGENFE TV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LRKNPVESVAVAFGTGLIAGVIVSL WRR Sbjct: 1 MVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAAQATEKLGENFEKTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQTLRKNPVESVAVAFGTGLIAGVIVSLAWRR 149
BLAST of mRNA_M-pyrifera_M_contig91050.21108.1 vs. uniprot
Match: A0A355GAM5_9PLAN (General stress protein CsbD n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355GAM5_9PLAN) HSP 1 Score: 150 bits (379), Expect = 1.930e-43 Identity = 107/149 (71.81%), Postives = 126/149 (84.56%), Query Frame = 1 Query: 82 MVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAARATEKLGENFENTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKNPVESVAVAFGTGLIAGVIVSLVWRR 528 M TREE+RGHWNE+RGRIE+ W+QL+ DLDG+EG+TDQLVGKIQQKTG+ S +IR+ELD I++++S+SA+ K+G+ F V XXXXXXXXXXXXXXXXXXXXXXXXXXXXX RK+P ESVAVAFGTGLIAGVIVSLVWRR Sbjct: 1 MTTREELRGHWNEIRGRIEERWSQLNSSDLDGLEGKTDQLVGKIQQKTGETSKDIRKELDSIIENLSQSASSMAGKMGDTFNEAVKNSKEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKHPAESVAVAFGTGLIAGVIVSLVWRR 149
BLAST of mRNA_M-pyrifera_M_contig91050.21108.1 vs. uniprot
Match: A0A517VB68_9PLAN (CsbD domain-containing protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VB68_9PLAN) HSP 1 Score: 142 bits (359), Expect = 2.060e-40 Identity = 108/149 (72.48%), Postives = 125/149 (83.89%), Query Frame = 1 Query: 82 MVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAARATEKLGENFENTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKNPVESVAVAFGTGLIAGVIVSLVWRR 528 M TREE+RGHWNE+RGRIE+ W+QLS DLDG+EG+TDQLVGKIQQKTG+ ++I++ELD +V+ +S SA+ K+GE F V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +P ESVAVAFGTGLIAGVIVSLVWRR Sbjct: 1 MTTREELRGHWNEIRGRIEEKWSQLSSSDLDGLEGKTDQLVGKIQQKTGETRSDIQRELDSMVESLSHSASSMAGKVGETFNEAVKNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPAESVAVAFGTGLIAGVIVSLVWRR 149
BLAST of mRNA_M-pyrifera_M_contig91050.21108.1 vs. uniprot
Match: A0A350KIY1_9PLAN (General stress protein CsbD n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A350KIY1_9PLAN) HSP 1 Score: 129 bits (323), Expect = 5.750e-35 Identity = 92/149 (61.74%), Postives = 106/149 (71.14%), Query Frame = 1 Query: 82 MVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAARATEKLGENFENTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKNPVESVAVAFGTGLIAGVIVSLVWRR 528 M TREE+RGHWNE+RGRIE+ W+QL+ DLDG+EG+TDQLVGKIQQKTG+ +I++ELD +V+ S F V XXXXXXXXXXXXXXXXXXXXXX K+P ESVAVAFGTGLIAGVIVSL WRR Sbjct: 1 MTTREELRGHWNEIRGRIEERWSQLNSSDLDGLEGKTDQLVGKIQQKTGETKRDIQRELDSMVESFSXXXXXXXXXXXXTFNEAVKNSKEQFAHASDAXXXXXXXXXXXXXXXXXXXXXXXXKHPAESVAVAFGTGLIAGVIVSLAWRR 149
BLAST of mRNA_M-pyrifera_M_contig91050.21108.1 vs. uniprot
Match: A0A518CLI1_9PLAN (CsbD domain-containing protein n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CLI1_9PLAN) HSP 1 Score: 120 bits (301), Expect = 1.140e-31 Identity = 86/151 (56.95%), Postives = 106/151 (70.20%), Query Frame = 1 Query: 82 MVTREEIR--GHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAARATEKLGENFENTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKNPVESVAVAFGTGLIAGVIVSLVWRR 528 M T +E++ G+WNELRGRIE+HW+QL+ DLD +EG DQ+VGKIQQKTG+ S +I EL+ +++ + SAA TEKLG+ +N XXXXXXXXXXXXXXXX +RK+P ESVAVAFGTGLIAGVIVSL RR Sbjct: 1 MTTSQELKMKGNWNELRGRIEEHWSQLTSSDLDNLEGRKDQIVGKIQQKTGETSQKIEAELNHLLETVCNSAASTTEKLGQTVQNAQEXXXXXXXXXXXXXXXXNDSIQQGYQQAEET----VRKHPTESVAVAFGTGLIAGVIVSLALRR 147
BLAST of mRNA_M-pyrifera_M_contig91050.21108.1 vs. uniprot
Match: A0A518I9I1_9PLAN (CsbD domain-containing protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I9I1_9PLAN) HSP 1 Score: 116 bits (291), Expect = 3.880e-30 Identity = 82/149 (55.03%), Postives = 97/149 (65.10%), Query Frame = 1 Query: 82 MVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAARATEKLGENFENTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKNPVESVAVAFGTGLIAGVIVSLVWRR 528 M TREE+RGHWNE+RGRIE+ W +L+ DLD VEG+T I ELD IV ++S+SA+ +E+ G+N VN XXXXXXXXXXXXXXXX ++KNPVESVAVAFGTGLIAGVIVSLVWRR Sbjct: 1 MATREELRGHWNEIRGRIEERWGELTSDDLDEVEGKTXXXXXXXXXXXXXTRQTIETELDSIVRNLSQSASSFSEEFGDNIHEAVNKTKQQFSHASDVAKXXXXXXXXXXXXXXXXAEQTVQKNPVESVAVAFGTGLIAGVIVSLVWRR 149
BLAST of mRNA_M-pyrifera_M_contig91050.21108.1 vs. uniprot
Match: UPI00142473B4 (CsbD family protein n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI00142473B4) HSP 1 Score: 107 bits (268), Expect = 1.010e-26 Identity = 60/149 (40.27%), Postives = 87/149 (58.39%), Query Frame = 1 Query: 82 MVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAARATEKLGENFENTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKNPVESVAVAFGTGLIAGVIVSLVWRR 528 M+T EE++G+WN+LRG++E+ W+QLS +DLD + G DQLVG +QQKTGQA I EL+ ++D +++A+ EKLG + N ++++P ESVAVAFGTGLIAGV++ L+ RR Sbjct: 1 MITSEELKGNWNQLRGKVEERWSQLSSNDLDQINGNVDQLVGVLQQKTGQAKQTIEHELNELLDSSAQNASSVAEKLGA-YSKEANEYAAQVAEQARQQYMQMAGGVQEGYNQAGEY---VKQHPAESVAVAFGTGLIAGVMLGLIVRR 145
BLAST of mRNA_M-pyrifera_M_contig91050.21108.1 vs. uniprot
Match: A0A517WX28_9PLAN (CsbD domain-containing protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WX28_9PLAN) HSP 1 Score: 92.8 bits (229), Expect = 7.120e-21 Identity = 87/149 (58.39%), Postives = 100/149 (67.11%), Query Frame = 1 Query: 82 MVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDDMSKSAARATEKLGENFENTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKNPVESVAVAFGTGLIAGVIVSLVWRR 528 M TREEI G WNELRGRI++ W QLS +DLD +E S +I EL+ IV+++S+SA+ AT XXXXXXXXXXXXXXXXXXXXXXXXXXX +RK+P ESVAVAFGTGLIAGVIVSLVWRR Sbjct: 1 MTTREEIHGQWNELRGRIQERWGQLSSNDLDELEXXXXXXXXXXXXXXXXTSQKIEAELESIVENLSQSASSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQT----IRKHPAESVAVAFGTGLIAGVIVSLVWRR 145
BLAST of mRNA_M-pyrifera_M_contig91050.21108.1 vs. uniprot
Match: A0A517Z413_9PLAN (CsbD domain-containing protein n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z413_9PLAN) HSP 1 Score: 92.4 bits (228), Expect = 8.570e-21 Identity = 54/155 (34.84%), Postives = 81/155 (52.26%), Query Frame = 1 Query: 82 MVTREEIRGHWNELRGRIEKHWNQLSPHDLDGVEGETDQLVGKIQQKTGQASTEIRQELDCIVDD-------MSKSAARATEKLGENFENTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKNPVESVAVAFGTGLIAGVIVSLVWR 525 M+TR+E+ G WNE++G++++ W QLS DL EG DQLVG IQQKTG++ I + L+ +DD ++++A E+ E ++ TV+ +++ PVESVAVAFG G+I GV+V L R Sbjct: 1 MITRQELEGQWNEVKGQVKERWGQLSDDDLARAEGNADQLVGVIQQKTGESRRNIEEFLEKAIDDNANTMDQVARTARAYAEQASEKYQETVDQVTDQVGASYAEAEAM------------------VQRKPVESVAVAFGAGIITGVVVGLALR 137 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91050.21108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig91050.21108.1 >prot_M-pyrifera_M_contig91050.21108.1 ID=prot_M-pyrifera_M_contig91050.21108.1|Name=mRNA_M-pyrifera_M_contig91050.21108.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp HLRHFEFRILFQENNSAEFDYNSKERDMVTREEIRGHWNELRGRIEKHWNback to top mRNA from alignment at M-pyrifera_M_contig91050:253..783- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig91050.21108.1 ID=mRNA_M-pyrifera_M_contig91050.21108.1|Name=mRNA_M-pyrifera_M_contig91050.21108.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=531bp|location=Sequence derived from alignment at M-pyrifera_M_contig91050:253..783- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig91050:253..783- >mRNA_M-pyrifera_M_contig91050.21108.1 ID=mRNA_M-pyrifera_M_contig91050.21108.1|Name=mRNA_M-pyrifera_M_contig91050.21108.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1062bp|location=Sequence derived from alignment at M-pyrifera_M_contig91050:253..783- (Macrocystis pyrifera P11B4 male)back to top |