mRNA_M-pyrifera_M_contig91044.21107.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig91044.21107.1 vs. uniprot
Match: A0A835R7R8_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835R7R8_VANPL) HSP 1 Score: 124 bits (312), Expect = 6.760e-33 Identity = 60/99 (60.61%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 4 SKGDGRYLISNSKDQTIKLWDVRKMVEPASALMPPRSSWDYRQGIYWVSRERHLFDGSKEHKQDVSLKTYRGHDVARTLIRSYFSPAHSTGQRYIYSGS 300 S+GDGRY ISN KDQ +KLWD+RKM A+ MP +S+WDYR W+ RH + H D SL TYRGH V +TLIR YFSPAHSTGQRYIY+GS Sbjct: 23 SRGDGRYFISNGKDQALKLWDIRKMSSGANCSMPMKSNWDYR----WMEYPRHARNLC--HPHDQSLTTYRGHSVLQTLIRCYFSPAHSTGQRYIYTGS 115
BLAST of mRNA_M-pyrifera_M_contig91044.21107.1 vs. uniprot
Match: A0A835R757_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835R757_VANPL) HSP 1 Score: 124 bits (312), Expect = 8.880e-32 Identity = 60/99 (60.61%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 4 SKGDGRYLISNSKDQTIKLWDVRKMVEPASALMPPRSSWDYRQGIYWVSRERHLFDGSKEHKQDVSLKTYRGHDVARTLIRSYFSPAHSTGQRYIYSGS 300 S+GDGRY ISN KDQ +KLWD+RKM A+ MP +S+WDYR W+ RH + H D SL TYRGH V +TLIR YFSPAHSTGQRYIY+GS Sbjct: 128 SRGDGRYFISNGKDQALKLWDIRKMSSGANCSMPMKSNWDYR----WMEYPRHARNLC--HPHDQSLTTYRGHSVLQTLIRCYFSPAHSTGQRYIYTGS 220
BLAST of mRNA_M-pyrifera_M_contig91044.21107.1 vs. uniprot
Match: A0A3B5YUA9_WHEAT (Uncharacterized protein n=3 Tax=Pooideae TaxID=147368 RepID=A0A3B5YUA9_WHEAT) HSP 1 Score: 123 bits (309), Expect = 3.960e-31 Identity = 63/117 (53.85%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 4 SKGDGRYLISNSKDQTIKLWDVRKMVEPASALMPPRSSWDYRQGIYWVSRERHLFDGSKEHKQDVSLKTYRGHDVARTLIRSYFSPAHSTGQRYIYSGSCSGKITSTYLCMSWRQPI 354 S+GDGRYLISN KDQTIKLWDVRKM P WDYR W++ H +H D+SL TYRGH V RTLIR YFSP HSTGQRYIY+GS + + +SW I Sbjct: 154 SRGDGRYLISNCKDQTIKLWDVRKMSATVKGRQPRLYDWDYR----WMTFPSHA--RYYKHPNDLSLATYRGHSVLRTLIRCYFSPMHSTGQRYIYTGSSDDSVHIYDVKLSWHGSI 264
BLAST of mRNA_M-pyrifera_M_contig91044.21107.1 vs. uniprot
Match: M8AS64_TRIUA (LEC14B protein n=4 Tax=Triticinae TaxID=1648030 RepID=M8AS64_TRIUA) HSP 1 Score: 118 bits (295), Expect = 5.550e-30 Identity = 59/104 (56.73%), Postives = 68/104 (65.38%), Query Frame = 1 Query: 4 SKGDGRYLISNSKDQTIKLWDVRKMVEPASALMPPRSSWDYRQGIYWVSRERHLFDGSKEHKQDVSLKTYRGHDVARTLIRSYFSPAHSTGQRYIYSGSCSGKI 315 S+GDGRYLISN KDQTIKLWD+RKM P WDYR + + S R+ +H D+SL TYRGH V RTLIR YFSP HSTGQRYIY+GS + Sbjct: 50 SRGDGRYLISNCKDQTIKLWDIRKMSATVKGRQPRLYDWDYRW-MSFPSDARYY-----KHPNDLSLATYRGHSVLRTLIRCYFSPMHSTGQRYIYTGSSDDSV 147
BLAST of mRNA_M-pyrifera_M_contig91044.21107.1 vs. uniprot
Match: A0A833QWY8_9POAL (LEC14B protein-like protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QWY8_9POAL) HSP 1 Score: 123 bits (308), Expect = 5.620e-30 Identity = 60/99 (60.61%), Postives = 69/99 (69.70%), Query Frame = 1 Query: 4 SKGDGRYLISNSKDQTIKLWDVRKMVEPASALMPPRSSWDYRQGIYWVSRERHLFDGSKEHKQDVSLKTYRGHDVARTLIRSYFSPAHSTGQRYIYSGS 300 S+GDGRYLISN KDQTIKLWD+RKM +P WDYR +Y S RH+ +H D SL T+RGH V RTLIR YFSPAHSTGQ+YIY+GS Sbjct: 300 SRGDGRYLISNGKDQTIKLWDIRKMSSSVKFSIPRAYEWDYRCMVY-PSEARHM-----KHPHDQSLATFRGHSVLRTLIRCYFSPAHSTGQKYIYTGS 392
BLAST of mRNA_M-pyrifera_M_contig91044.21107.1 vs. uniprot
Match: A0A6A4YLR7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YLR7_9STRA) HSP 1 Score: 116 bits (290), Expect = 5.870e-30 Identity = 59/107 (55.14%), Postives = 73/107 (68.22%), Query Frame = 1 Query: 4 SKGDGRYLISNSKDQTIKLWDVRKMVEPASAL-MPPRSSWDYRQGIYWVSRERHLFDGS--KEHKQDVSLKTYRGHDVARTLIRSYFSPAHSTGQRYIYSGSCSGKI 315 S+ DG Y +SN+KDQT KLWD+RK V+ A MP + WDYR+G Y + FDG+ H QD S+ TYRGH V +TLIR YFSP HSTGQR+IYSGS G++ Sbjct: 10 SRDDGYYFLSNAKDQTAKLWDLRKCVDHAGVQHMPRQYDWDYRRGEYPGN-----FDGAVAMPHPQDQSVLTYRGHAVKKTLIRCYFSPMHSTGQRFIYSGSADGEV 111
BLAST of mRNA_M-pyrifera_M_contig91044.21107.1 vs. uniprot
Match: A0A2I0WY29_9ASPA (LEC14B n=4 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WY29_9ASPA) HSP 1 Score: 119 bits (299), Expect = 8.950e-30 Identity = 60/99 (60.61%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 4 SKGDGRYLISNSKDQTIKLWDVRKMVEPASALMPPRSSWDYRQGIYWVSRERHLFDGSKEHKQDVSLKTYRGHDVARTLIRSYFSPAHSTGQRYIYSGS 300 S+GDGRY ISN KDQTIKLWD+RKM P S WDYR Y S +HL H D S+ TYRGH V RTLIR YFSP+HSTGQRYIY+GS Sbjct: 136 SRGDGRYFISNGKDQTIKLWDIRKMSSGPKCPRPRISDWDYRWMEY-PSHAKHL-----SHPNDQSVATYRGHSVLRTLIRCYFSPSHSTGQRYIYTGS 228
BLAST of mRNA_M-pyrifera_M_contig91044.21107.1 vs. uniprot
Match: A0A3B5XWQ5_WHEAT (Uncharacterized protein n=4 Tax=Triticinae TaxID=1648030 RepID=A0A3B5XWQ5_WHEAT) HSP 1 Score: 121 bits (303), Expect = 1.570e-29 Identity = 60/104 (57.69%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 4 SKGDGRYLISNSKDQTIKLWDVRKMVEPASALMPPRSSWDYRQGIYWVSRERHLFDGSKEHKQDVSLKTYRGHDVARTLIRSYFSPAHSTGQRYIYSGSCSGKI 315 S+GDGRYLISN KDQTIKLWD+RKM P WDYR W+S H +H D+SL TYRGH V RTLIR YFSP HSTGQRYIY+GS + Sbjct: 248 SRGDGRYLISNCKDQTIKLWDIRKMSATVKGRQPRLYDWDYR----WMSFPSHA--RYYKHPNDLSLATYRGHSVLRTLIRCYFSPMHSTGQRYIYTGSSDDSV 345
BLAST of mRNA_M-pyrifera_M_contig91044.21107.1 vs. uniprot
Match: R7WFJ4_AEGTA (Uncharacterized protein n=2 Tax=Aegilops tauschii TaxID=37682 RepID=R7WFJ4_AEGTA) HSP 1 Score: 120 bits (301), Expect = 1.590e-29 Identity = 60/104 (57.69%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 4 SKGDGRYLISNSKDQTIKLWDVRKMVEPASALMPPRSSWDYRQGIYWVSRERHLFDGSKEHKQDVSLKTYRGHDVARTLIRSYFSPAHSTGQRYIYSGSCSGKI 315 S+GDGRYLISN KDQTIKLWDVR+M P WDYR W+S H +H D+SL TYRGH V RTLIR YFSP HSTGQRYIY+GS + Sbjct: 182 SRGDGRYLISNCKDQTIKLWDVRRMSATVKGRQPRLYDWDYR----WMSFPSHA--RYYKHPNDLSLATYRGHSVLRTLIRCYFSPMHSTGQRYIYTGSSDDSV 279
BLAST of mRNA_M-pyrifera_M_contig91044.21107.1 vs. uniprot
Match: A0A446IL50_TRITD (Uncharacterized protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446IL50_TRITD) HSP 1 Score: 113 bits (283), Expect = 3.280e-29 Identity = 57/99 (57.58%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 4 SKGDGRYLISNSKDQTIKLWDVRKMVEPASALMPPRSSWDYRQGIYWVSRERHLFDGSKEHKQDVSLKTYRGHDVARTLIRSYFSPAHSTGQRYIYSGS 300 S+GDG Y ISN KDQTIKLWD+RK+ P WDYR Y S R L +H D SL T+RGH V RTLIR YFSP HSTGQRYIY+GS Sbjct: 34 SRGDGHYFISNCKDQTIKLWDIRKLSSATKDCTPKAYEWDYRWMTY-PSEARFL-----KHSYDQSLATFRGHSVLRTLIRCYFSPMHSTGQRYIYTGS 126 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91044.21107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig91044.21107.1 >prot_M-pyrifera_M_contig91044.21107.1 ID=prot_M-pyrifera_M_contig91044.21107.1|Name=mRNA_M-pyrifera_M_contig91044.21107.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp NSKGDGRYLISNSKDQTIKLWDVRKMVEPASALMPPRSSWDYRQGIYWVSback to top mRNA from alignment at M-pyrifera_M_contig91044:214..784- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig91044.21107.1 ID=mRNA_M-pyrifera_M_contig91044.21107.1|Name=mRNA_M-pyrifera_M_contig91044.21107.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=571bp|location=Sequence derived from alignment at M-pyrifera_M_contig91044:214..784- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig91044:214..784- >mRNA_M-pyrifera_M_contig91044.21107.1 ID=mRNA_M-pyrifera_M_contig91044.21107.1|Name=mRNA_M-pyrifera_M_contig91044.21107.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig91044:214..784- (Macrocystis pyrifera P11B4 male)back to top |