mRNA_M-pyrifera_M_contig91038.21105.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig91038.21105.1 vs. uniprot
Match: A0A2R6WC89_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WC89_MARPO) HSP 1 Score: 115 bits (287), Expect = 1.410e-30 Identity = 58/115 (50.43%), Postives = 81/115 (70.43%), Query Frame = 1 Query: 19 PRLFALKKSTGITGLPVVPEARKVLERLYIKQLEDVKSIPADAAYRIDVEKEALHRLGAVQSDASSEEVERQIGRGQLEELITQAEGELALIPKMAEWKLWEVPDGHQVEVDIKQ 363 P L +K++TGI GLPVVP AR+VL LY K L+ V+ IP A YR VE+ HRL + +E+E+++G GQ+E+LI QA+ EL LIPKMAEWK WE P+G++V++ I++ Sbjct: 9 PLLGGVKETTGIVGLPVVPNAREVLIGLYRKTLDAVQPIPESAQYRKTVEEITQHRLAICNEEEDWKEIEKRVGNGQVEQLIQQAKDELTLIPKMAEWKPWEAPEGYKVQIMIEE 123
BLAST of mRNA_M-pyrifera_M_contig91038.21105.1 vs. uniprot
Match: A0A388LE77_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LE77_CHABU) HSP 1 Score: 108 bits (270), Expect = 5.480e-28 Identity = 58/112 (51.79%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 13 SLPRLFALKKSTGITGLPVVPEARKVLERLYIKQLEDVKSIPADAAYRIDVEKEALHRLGAVQSDASSEEVERQIGRGQLEELITQAEGELALIPKMAEWKLWEVPDGHQVE 348 S P L +K++T I G VVP AR+VL LY L V+ IP A YR DVEK A +RL + + E++E++IG GQ+EELI QA+ E+ LIPKMAEWK WEVP H +E Sbjct: 7 SRPLLARVKEATNIVGFEVVPNAREVLINLYNDMLRQVQVIPEQAKYRQDVEKVARYRLRVCEEEEDWEKIEKRIGCGQVEELIWQAKDEMTLIPKMAEWKPWEVPPNHHIE 118
BLAST of mRNA_M-pyrifera_M_contig91038.21105.1 vs. uniprot
Match: A0A2K1KJE1_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KJE1_PHYPA) HSP 1 Score: 111 bits (278), Expect = 6.540e-28 Identity = 61/111 (54.95%), Postives = 77/111 (69.37%), Query Frame = 1 Query: 19 PRLFALKKSTGITGLPVVPEARKVLERLYIKQLEDVKSIPADAAYRIDVEKEALHRLGAVQSDASSEEVERQIGRGQLEELITQAEGELALIPKMAEWKLWEVPDGHQVEV 351 P L ++K+STGI GL VVP AR+VL LY + L+ V+ IP A YR VE HRL Q + E +E++I GQ+EELI QA+ EL LIPKMAEWK WEVP+G++VEV Sbjct: 125 PLLASVKESTGIVGLDVVPNAREVLITLYQQTLKAVQPIPESAQYRKSVEALTHHRLKVCQEEQDWENIEKRIQGGQVEELIVQAKDELQLIPKMAEWKPWEVPEGYKVEV 235
BLAST of mRNA_M-pyrifera_M_contig91038.21105.1 vs. uniprot
Match: A0A7S3FPY6_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FPY6_9CHLO) HSP 1 Score: 107 bits (268), Expect = 2.670e-27 Identity = 56/107 (52.34%), Postives = 73/107 (68.22%), Query Frame = 1 Query: 37 KKSTGITGLPVVPEARKVLERLYIKQLEDVKSIPADAAYRIDVEKEALHRLGAVQSDASSEEVERQIGRGQLEELITQAEGELALIPKMAEWKLWEVPDGHQVEVDI 357 K +TGI G+ V PEA L L K L +VK IP +A YR+ VE A RL V D S E++E +IG+GQLEELI A EL+LIPKMAEWK W+VP+GH++++ + Sbjct: 48 KTTTGIVGVEVDPEAPDTLRHLLKKILREVKVIPENAQYRVSVETMANQRLEVVSKDISPEQMEEEIGQGQLEELILHARDELSLIPKMAEWKPWDVPEGHKIKMVV 154
BLAST of mRNA_M-pyrifera_M_contig91038.21105.1 vs. uniprot
Match: D8RH13_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RH13_SELML) HSP 1 Score: 105 bits (263), Expect = 1.970e-26 Identity = 60/117 (51.28%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 1 RMFRSLPRLFALKKSTGITGLPVVPEARKVLERLYIKQLEDVKSIPADAAYRIDVEKEALHRLGAVQSDASSEEVERQIGRGQLEELITQAEGELALIPKMAEWKLWEVPDGHQVEV 351 R F P L +KKSTGITGL V P+AR+ L LY + L +SIP +A Y+ V K RL Q + E++E +IG GQ+EELI QAE EL LIPKM EWK WEVP+GH++ + Sbjct: 4 RRFHPGPLLAKVKKSTGITGLRVEPQAREKLLGLYQRTLLAAESIPEEAFYKQAVLKITNARLKVCQEEEDWEKIEERIGCGQVEELIKQAEDELKLIPKMIEWKPWEVPEGHKIRI 120
BLAST of mRNA_M-pyrifera_M_contig91038.21105.1 vs. uniprot
Match: A9NR96_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NR96_PICSI) HSP 1 Score: 105 bits (261), Expect = 2.450e-26 Identity = 56/111 (50.45%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 19 PRLFALKKSTGITGLPVVPEARKVLERLYIKQLEDVKSIPADAAYRIDVEKEALHRLGAVQSDASSEEVERQIGRGQLEELITQAEGELALIPKMAEWKLWEVPDGHQVEV 351 P L +K++TGI GL VVP AR+VL LY K L ++K+IP + YR VE HR Q + E +E++I GQ+EELI A+ EL LIPKMAEWK WEVPD + E+ Sbjct: 9 PLLAKVKETTGIVGLEVVPNAREVLISLYDKTLNEIKTIPENVRYRKHVEAFTNHRRKVCQEEEDWETIEKRIACGQVEELIEDAQSELELIPKMAEWKPWEVPDDYHCEI 119
BLAST of mRNA_M-pyrifera_M_contig91038.21105.1 vs. uniprot
Match: A0A0D6R960_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R960_ARACU) HSP 1 Score: 104 bits (260), Expect = 4.180e-26 Identity = 57/111 (51.35%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 19 PRLFALKKSTGITGLPVVPEARKVLERLYIKQLEDVKSIPADAAYRIDVEKEALHRLGAVQSDASSEEVERQIGRGQLEELITQAEGELALIPKMAEWKLWEVPDGHQVEV 351 P L +K+STG+ GL VVP AR+VL LY K L++V+ IP +A YR VE RL Q + E +E++I GQ+EELI A+ EL+LIPKMAEWK WEVPD + E+ Sbjct: 9 PLLAKVKESTGVVGLEVVPNAREVLISLYNKTLKEVQIIPPNAPYRKHVEAFTHQRLKVCQEEEDWELIEKRIACGQVEELIEDAQSELSLIPKMAEWKPWEVPDDYNCEI 119
BLAST of mRNA_M-pyrifera_M_contig91038.21105.1 vs. uniprot
Match: A0A5B8MRA6_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MRA6_9CHLO) HSP 1 Score: 103 bits (258), Expect = 7.140e-26 Identity = 55/107 (51.40%), Postives = 71/107 (66.36%), Query Frame = 1 Query: 37 KKSTGITGLPVVPEARKVLERLYIKQLEDVKSIPADAAYRIDVEKEALHRLGAVQSDASSEEVERQIGRGQLEELITQAEGELALIPKMAEWKLWEVPDGHQVEVDI 357 K +TGI G+ V P A + L L K L +VK IP +A YR VE A RL V D S E++E +IG+GQLEELI A+ EL+LIPKMAEWK W+VP GH++ + + Sbjct: 38 KTTTGIVGVEVDPNAPETLRHLLKKILREVKVIPENAQYRTSVEMMANERLAVVSKDISPEQMEDEIGQGQLEELILHAKDELSLIPKMAEWKPWDVPKGHKIRMIV 144
BLAST of mRNA_M-pyrifera_M_contig91038.21105.1 vs. uniprot
Match: A0A7S2Z7E0_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z7E0_9CHLO) HSP 1 Score: 103 bits (257), Expect = 1.070e-25 Identity = 53/107 (49.53%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 37 KKSTGITGLPVVPEARKVLERLYIKQLEDVKSIPADAAYRIDVEKEALHRLGAVQSDASSEEVERQIGRGQLEELITQAEGELALIPKMAEWKLWEVPDGHQVEVDI 357 K +TGI G+ V P+A + L ++ + L +VK IP +A YR+ VE A RL V D E++E +IG GQLEELI QA+ EL+LIPKMAEWK W VP+GH++++ + Sbjct: 40 KTTTGIVGVEVDPQAPETLRKMLKQILREVKVIPENAQYRVSVEVMANERLEVVSKDIPPEQMEEEIGAGQLEELILQAKDELSLIPKMAEWKPWVVPEGHKIKMVV 146
BLAST of mRNA_M-pyrifera_M_contig91038.21105.1 vs. uniprot
Match: A0A8J9SH82_9CHLO (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SH82_9CHLO) HSP 1 Score: 100 bits (250), Expect = 8.570e-25 Identity = 58/111 (52.25%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 34 LKKSTGITGLPVVPEARKVLERLYIKQLEDV-KSIPADAAYRIDVEKEALHRLGAVQSDASSEEVERQIGRGQLEELITQAEGELALIPKMAEWKLWEVPDGHQVEVDIKQ 363 LK TGI GLPVVP AR+VL+ K L DV + IP D YR +E +R+ AV+S A+ EEVE Q QLE+LI Q + EL LIPKMAEWK W+VP GH++E +++ Sbjct: 29 LKLDTGIVGLPVVPNAREVLKEKINKVLADVAEQIPEDTEYRRVLEATYNYRMKAVESGATDEEVEEQFTM-QLEQLIKQCDDELGLIPKMAEWKPWDVPPGHKIETIVEE 138 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91038.21105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig91038.21105.1 >prot_M-pyrifera_M_contig91038.21105.1 ID=prot_M-pyrifera_M_contig91038.21105.1|Name=mRNA_M-pyrifera_M_contig91038.21105.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp MFRSLPRLFALKKSTGITGLPVVPEARKVLERLYIKQLEDVKSIPADAAYback to top mRNA from alignment at M-pyrifera_M_contig91038:302..664- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig91038.21105.1 ID=mRNA_M-pyrifera_M_contig91038.21105.1|Name=mRNA_M-pyrifera_M_contig91038.21105.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=363bp|location=Sequence derived from alignment at M-pyrifera_M_contig91038:302..664- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig91038:302..664- >mRNA_M-pyrifera_M_contig91038.21105.1 ID=mRNA_M-pyrifera_M_contig91038.21105.1|Name=mRNA_M-pyrifera_M_contig91038.21105.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig91038:302..664- (Macrocystis pyrifera P11B4 male)back to top |