mRNA_M-pyrifera_M_contig91037.21104.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91037.21104.1
Unique NamemRNA_M-pyrifera_M_contig91037.21104.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91037.21104.1 vs. uniprot
Match: A0A1P8WMK7_9PLAN (Glutaminase n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WMK7_9PLAN)

HSP 1 Score: 415 bits (1067), Expect = 2.770e-144
Identity = 205/259 (79.15%), Postives = 226/259 (87.26%), Query Frame = 1
Query:    7 GAAHCLGDADERFSIQSISKVFTLSMALRRVGDDVWKRVGREPSGSPFNSIVQLESERGIPRNPLINAGAIVITDHLVEQVGPDDMLADLLERLRTLSGDPSISIDPIVARSEAKAGARNRALASFMQSYGNLRNPVEATLTAYFSHCAISMNCRQLARAALFLAFDGRDPVSGQRLITSEFCRRINAVMMLCGHYDNSGDFAYRIGLPGKSGVGGGILAIAPRRGSIAVWSPGLNAAGTSLVGGLALEAFVQATGWSV 783
            G  HC+GDA+ERFSIQSISKVFTLSM LR+VGDD+WKRVGREPSGSPFNSIVQLE ERGIPRNPLINAGAIV+TDHLV   GP  M+ +LL RLR L+GDPSI++D  VA SEA  GARNRALA+FMQS+GNL NPVE TL AYFSHCAISMNCRQLARAALFLAF+GRDP+SG++++T E CRRINAVMM CGHYDNSGDF YRIGLPGKSGVGGGIL ++P  GSIAVWSPGLN AGTS VG LALE  V+ TGWSV
Sbjct:   49 GDTHCVGDAEERFSIQSISKVFTLSMVLRKVGDDLWKRVGREPSGSPFNSIVQLEMERGIPRNPLINAGAIVVTDHLVSDFGPAAMIDELLNRLRMLAGDPSIAVDEDVASSEASVGARNRALANFMQSFGNLHNPVEETLAAYFSHCAISMNCRQLARAALFLAFNGRDPISGKQMVTGEACRRINAVMMSCGHYDNSGDFTYRIGLPGKSGVGGGILVVSPGHGSIAVWSPGLNKAGTSHVGSLALETLVRLTGWSV 307          
BLAST of mRNA_M-pyrifera_M_contig91037.21104.1 vs. uniprot
Match: A0A5B1CR39_9BACT (Glutaminase n=1 Tax=Rubripirellula obstinata TaxID=406547 RepID=A0A5B1CR39_9BACT)

HSP 1 Score: 401 bits (1031), Expect = 7.770e-139
Identity = 200/261 (76.63%), Postives = 227/261 (86.97%), Query Frame = 1
Query:    1 ADGAAHCLGDADERFSIQSISKVFTLSMALRRVGDDVWKRVGREPSGSPFNSIVQLESERGIPRNPLINAGAIVITDHLVEQVGPDDMLADLLERLRTLSGDPSISIDPIVARSEAKAGARNRALASFMQSYGNLRNPVEATLTAYFSHCAISMNCRQLARAALFLAFDGRDPVSGQRLITSEFCRRINAVMMLCGHYDNSGDFAYRIGLPGKSGVGGGILAIAPRRGSIAVWSPGLNAAGTSLVGGLALEAFVQATGWSV 783
            ADG+ HC+GDADE FSIQSISKVFTLSMALR+VGD +W+ VGREPSGSPFNSIVQLE E GIPRNPLINAGAIV+TDHLV QVGP+ M+  LL RLR L+ D +I +D IV  SE++AG+RNRALA FM+S+ NL+NPVE TL AYFSHCAISMNCRQL+RAALFLAFDG DPVSG ++++SE CRRINAVMM CGHYDNSGDF YRIGLPGKSGVGGGIL +AP  G+IAVWSPGLN AGTS VG LALE+FV+ TGW+V
Sbjct:   45 ADGSTHCIGDADEPFSIQSISKVFTLSMALRKVGDVLWQSVGREPSGSPFNSIVQLEKECGIPRNPLINAGAIVVTDHLVTQVGPEIMIDKLLTRLRMLADDDAILVDQIVTESESEAGSRNRALAYFMKSFDNLQNPVEDTLRAYFSHCAISMNCRQLSRAALFLAFDGTDPVSGTQMVSSEACRRINAVMMSCGHYDNSGDFTYRIGLPGKSGVGGGILVVAPGHGAIAVWSPGLNEAGTSTVGSLALESFVRQTGWTV 305          
BLAST of mRNA_M-pyrifera_M_contig91037.21104.1 vs. uniprot
Match: A0A5C6EHT6_9BACT (Glutaminase n=1 Tax=Rubripirellula reticaptiva TaxID=2528013 RepID=A0A5C6EHT6_9BACT)

HSP 1 Score: 400 bits (1029), Expect = 1.570e-138
Identity = 199/260 (76.54%), Postives = 225/260 (86.54%), Query Frame = 1
Query:    4 DGAAHCLGDADERFSIQSISKVFTLSMALRRVGDDVWKRVGREPSGSPFNSIVQLESERGIPRNPLINAGAIVITDHLVEQVGPDDMLADLLERLRTLSGDPSISIDPIVARSEAKAGARNRALASFMQSYGNLRNPVEATLTAYFSHCAISMNCRQLARAALFLAFDGRDPVSGQRLITSEFCRRINAVMMLCGHYDNSGDFAYRIGLPGKSGVGGGILAIAPRRGSIAVWSPGLNAAGTSLVGGLALEAFVQATGWSV 783
            DG   CLGDADE FSIQSISKVFTLSMALR VGD +W+RVGREPSGSPFNSIVQLE ERGIPRNPLINAGAIV+TDHLVE++G    +A+LL+R+R L+ D SI +D  VA SE+ AG RNRALASFM+SYGN++ PVE TL AYF HC+I+M CRQLARAALFLAFDG DP+SGQ++++S+ CRRINAVMM CGHYDNSGDF YRIGLPGKSGVGGGIL IAPR G++AVWSPGLN AGTS VG LALEA V+ATGWSV
Sbjct:   46 DGTQSCLGDADELFSIQSISKVFTLSMALRVVGDTLWERVGREPSGSPFNSIVQLEHERGIPRNPLINAGAIVVTDHLVERLGSSKTIAELLDRIRRLADDDSIKVDQAVAESESLAGERNRALASFMKSYGNIKCPVEETLAAYFCHCSIAMTCRQLARAALFLAFDGCDPISGQQMVSSQACRRINAVMMSCGHYDNSGDFTYRIGLPGKSGVGGGILVIAPRHGAVAVWSPGLNQAGTSAVGSLALEALVKATGWSV 305          
BLAST of mRNA_M-pyrifera_M_contig91037.21104.1 vs. uniprot
Match: A0A0J1ELI9_RHOIS (Glutaminase n=1 Tax=Rhodopirellula islandica TaxID=595434 RepID=A0A0J1ELI9_RHOIS)

HSP 1 Score: 394 bits (1011), Expect = 1.020e-135
Identity = 194/260 (74.62%), Postives = 225/260 (86.54%), Query Frame = 1
Query:    4 DGAAHCLGDADERFSIQSISKVFTLSMALRRVGDDVWKRVGREPSGSPFNSIVQLESERGIPRNPLINAGAIVITDHLVEQVGPDDMLADLLERLRTLSGDPSISIDPIVARSEAKAGARNRALASFMQSYGNLRNPVEATLTAYFSHCAISMNCRQLARAALFLAFDGRDPVSGQRLITSEFCRRINAVMMLCGHYDNSGDFAYRIGLPGKSGVGGGILAIAPRRGSIAVWSPGLNAAGTSLVGGLALEAFVQATGWSV 783
            DG  H LGDADE FSIQSISKVFTLSM LR+VGD++W+ VGREPSGSPFNSIVQLE E GIPRNPLINAGAIV+TDHLV+Q G D  +A+L+ER+RTL+ D +I +D  VA SE++AG+RNRALA F++S+GNLR+PVE TL AYFSHCAI+MNCRQLARAALFLAFDG DP+SG ++++S+ CRR+NAVMM CGHYDNSGDF YRIGLPGKSGVGGGIL +AP  G+IAVWSPGLN AGTS VG LALE  V+ TGWSV
Sbjct:   51 DGNVHTLGDADEYFSIQSISKVFTLSMVLRKVGDELWESVGREPSGSPFNSIVQLELEGGIPRNPLINAGAIVVTDHLVQQQGADATIAELIERMRTLASDSAIHVDQAVAYSESEAGSRNRALAYFLKSFGNLRSPVEETLKAYFSHCAIAMNCRQLARAALFLAFDGTDPISGIQMVSSKACRRVNAVMMTCGHYDNSGDFTYRIGLPGKSGVGGGILVVAPGNGAIAVWSPGLNEAGTSEVGSLALETLVRQTGWSV 310          
BLAST of mRNA_M-pyrifera_M_contig91037.21104.1 vs. uniprot
Match: A0A1B6Z9Z3_9SPHN (Glutaminase n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6Z9Z3_9SPHN)

HSP 1 Score: 371 bits (953), Expect = 8.600e-127
Identity = 183/264 (69.32%), Postives = 221/264 (83.71%), Query Frame = 1
Query:    7 GAAHCLGDADERFSIQSISKVFTLSMALRRVGDDVWKRVGREPSGSPFNSIVQLESERGIPRNPLINAGAIVITDHLVE-----QVGPDDMLADLLERLRTLSGDPSISIDPIVARSEAKAGARNRALASFMQSYGNLRNPVEATLTAYFSHCAISMNCRQLARAALFLAFDGRDPVSGQRLITSEFCRRINAVMMLCGHYDNSGDFAYRIGLPGKSGVGGGILAIAPRRGSIAVWSPGLNAAGTSLVGGLALEAFVQATGWSV 783
            G  HCLGDADE FS+QSISKVFTL++ L+++GD++WKRVGREPSGSPFNSIVQLE+E+GIPRNPLINAGAIV TDHL+      + G D  +ADLL+    L+ D +ISID  VA+SE+ AG+RNRALA FM S+ N+ NPVEATL+AYF HC+++++CRQLARAALFLAFDG DPV+G++++T + CRRI AVMM  GHYDNSGDFAYRIGLPGKSGVGGGIL +AP  G+IAVWSPGLN AGTS+VG +ALE  V+ TGWSV
Sbjct:   54 GDMHCLGDADESFSMQSISKVFTLALTLKQIGDELWKRVGREPSGSPFNSIVQLEAEQGIPRNPLINAGAIVTTDHLISAYGGGETGADQAMADLLQLFHRLADDDNISIDRHVAKSESDAGSRNRALAHFMTSFANMANPVEATLSAYFRHCSLAISCRQLARAALFLAFDGTDPVTGEQIVTKKRCRRILAVMMSSGHYDNSGDFAYRIGLPGKSGVGGGILVVAPDHGTIAVWSPGLNRAGTSMVGSIALEELVRQTGWSV 317          
BLAST of mRNA_M-pyrifera_M_contig91037.21104.1 vs. uniprot
Match: A0A3D9FEF3_9SPHN (Glutaminase n=1 Tax=Parasphingopyxis lamellibrachiae TaxID=680125 RepID=A0A3D9FEF3_9SPHN)

HSP 1 Score: 368 bits (944), Expect = 1.330e-125
Identity = 185/260 (71.15%), Postives = 218/260 (83.85%), Query Frame = 1
Query:    4 DGAAHCLGDADERFSIQSISKVFTLSMALRRVGDDVWKRVGREPSGSPFNSIVQLESERGIPRNPLINAGAIVITDHLVEQVGPDDMLADLLERLRTLSGDPSISIDPIVARSEAKAGARNRALASFMQSYGNLRNPVEATLTAYFSHCAISMNCRQLARAALFLAFDGRDPVSGQRLITSEFCRRINAVMMLCGHYDNSGDFAYRIGLPGKSGVGGGILAIAPRRGSIAVWSPGLNAAGTSLVGGLALEAFVQATGWSV 783
            DG+ + +GDA E FSIQSISKVFTLS+AL+++GD +W+RVGREPSGS FNSIVQLE E+GIPRNPLINAGAIV+TDHLVE    D  +  LL  LR  + DPSI ID  VA+SE++ GARNR+LA FM S+GNL N VEA L+AYF HCA+S++C QLARAALFLAFDG DPV+G+R++TS+ CRRINAVMM CGHYDNSGDFA+RIGLPGKSGVGGG+LAIAP  G++AVWSPGLN AGTS VG +ALEA +  TGWSV
Sbjct:   46 DGSCYRIGDAQEAFSIQSISKVFTLSLALQKMGDALWERVGREPSGSAFNSIVQLEHEKGIPRNPLINAGAIVVTDHLVENGDADAAINTLLGVLRDHAEDPSIDIDYEVAKSESETGARNRSLAHFMASFGNLDNEVEAVLSAYFRHCALSLSCSQLARAALFLAFDGEDPVTGERIVTSQRCRRINAVMMNCGHYDNSGDFAFRIGLPGKSGVGGGVLAIAPGEGAVAVWSPGLNDAGTSTVGAIALEALMAETGWSV 305          
BLAST of mRNA_M-pyrifera_M_contig91037.21104.1 vs. uniprot
Match: UPI0015A13E77 (glutaminase n=1 Tax=Parasphingopyxis algicola TaxID=2026624 RepID=UPI0015A13E77)

HSP 1 Score: 367 bits (941), Expect = 3.790e-125
Identity = 183/260 (70.38%), Postives = 215/260 (82.69%), Query Frame = 1
Query:    4 DGAAHCLGDADERFSIQSISKVFTLSMALRRVGDDVWKRVGREPSGSPFNSIVQLESERGIPRNPLINAGAIVITDHLVEQVGPDDMLADLLERLRTLSGDPSISIDPIVARSEAKAGARNRALASFMQSYGNLRNPVEATLTAYFSHCAISMNCRQLARAALFLAFDGRDPVSGQRLITSEFCRRINAVMMLCGHYDNSGDFAYRIGLPGKSGVGGGILAIAPRRGSIAVWSPGLNAAGTSLVGGLALEAFVQATGWSV 783
            DGA H +GDADE FSIQSISKVFT S+AL++VGD +WKRVGREPSGS FNSI+QLE E+GIPRNPLINAGAIV+TDHLVE    D  +  LL  LR  + D S+ ID  VA+SE++ GARNR+LA FM S+GNL N VE  L+AYF HCA++++C QLARAALFLAFDG+DPV+G+R++T + CRRINAVMM CGHYDNSGDFA+RIGLPGKSGVGGG+LAI P  G++AVWSPGLN AGTS VG +ALEA V  TGWSV
Sbjct:   46 DGACHKIGDADECFSIQSISKVFTFSLALQKVGDGLWKRVGREPSGSAFNSIIQLEHEKGIPRNPLINAGAIVVTDHLVENGDADATIEMLLRVLRDHAEDQSVDIDYEVAKSESETGARNRSLAHFMASFGNLDNEVEVVLSAYFRHCALALSCSQLARAALFLAFDGKDPVTGERILTPQRCRRINAVMMSCGHYDNSGDFAFRIGLPGKSGVGGGVLAIVPGEGAVAVWSPGLNDAGTSTVGSIALEALVAETGWSV 305          
BLAST of mRNA_M-pyrifera_M_contig91037.21104.1 vs. uniprot
Match: UPI00030A18E4 (glutaminase n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=UPI00030A18E4)

HSP 1 Score: 367 bits (941), Expect = 5.940e-125
Identity = 187/254 (73.62%), Postives = 213/254 (83.86%), Query Frame = 1
Query:   22 LGDADERFSIQSISKVFTLSMALRRVGDDVWKRVGREPSGSPFNSIVQLESERGIPRNPLINAGAIVITDHLVEQVGPDDMLADLLERLRTLSGDPSISIDPIVARSEAKAGARNRALASFMQSYGNLRNPVEATLTAYFSHCAISMNCRQLARAALFLAFDGRDPVSGQRLITSEFCRRINAVMMLCGHYDNSGDFAYRIGLPGKSGVGGGILAIAPRRGSIAVWSPGLNAAGTSLVGGLALEAFVQATGWSV 783
            LGD+ E FSIQSISKVFTLSMALR+  + VW RVGREPSGS FNSI+QLESE+GIPRNPLINAGAIV+TD LV   G D M+A+LL R   LSGD SI+ID  VA+SE+  G+RNRALA FM ++GN+ NPVE  L AYF  CA+ M+CRQLAR+ALFLAFDG DP++G+RLI+ E CRRINAVMM CGHYDNSGDFAYRIGLPGKSGVGGGIL IAP  G+IAVWSPGLNAAGTS+VG +ALE  V+ATGWSV
Sbjct:   65 LGDSHEPFSIQSISKVFTLSMALRQNDEAVWDRVGREPSGSAFNSIIQLESEKGIPRNPLINAGAIVVTDMLVAASGRDGMVAELLTRFHRLSGDDSIAIDDEVAQSESATGSRNRALAHFMAAFGNMANPVEDALHAYFRQCAVRMSCRQLARSALFLAFDGCDPIAGERLISRENCRRINAVMMSCGHYDNSGDFAYRIGLPGKSGVGGGILCIAPGHGAIAVWSPGLNAAGTSMVGAIALEELVEATGWSV 318          
BLAST of mRNA_M-pyrifera_M_contig91037.21104.1 vs. uniprot
Match: UPI0015A3F87C (glutaminase n=1 Tax=Parasphingopyxis sp. CP4 TaxID=2724527 RepID=UPI0015A3F87C)

HSP 1 Score: 364 bits (934), Expect = 4.400e-124
Identity = 184/260 (70.77%), Postives = 214/260 (82.31%), Query Frame = 1
Query:    4 DGAAHCLGDADERFSIQSISKVFTLSMALRRVGDDVWKRVGREPSGSPFNSIVQLESERGIPRNPLINAGAIVITDHLVEQVGPDDMLADLLERLRTLSGDPSISIDPIVARSEAKAGARNRALASFMQSYGNLRNPVEATLTAYFSHCAISMNCRQLARAALFLAFDGRDPVSGQRLITSEFCRRINAVMMLCGHYDNSGDFAYRIGLPGKSGVGGGILAIAPRRGSIAVWSPGLNAAGTSLVGGLALEAFVQATGWSV 783
            DG  H +GDADE FSIQSISKVFT S+AL++VGD +W+RVGREPSGS FNSIVQLE ERGIPRNPLINAGAIV+TDHL++    D     LL  LR  + D SI+ID  VARSE++ GARNR+LA FM S+GNL N VE  L+AYF HCA++++C QLARAALFLAFDG+DPV+ +R++T + CRRINAVMM CGHYDNSGDFA+RIGLPGKSGVGGG+L IAP  G+IAVWSPGLN AGTS VG LALEA V+ TGWSV
Sbjct:   46 DGTCHKIGDADECFSIQSISKVFTFSLALQKVGDTLWERVGREPSGSAFNSIVQLEHERGIPRNPLINAGAIVVTDHLIDNGDADATTEMLLGVLRDHAEDESIAIDMEVARSESETGARNRSLAHFMASFGNLDNDVETILSAYFRHCALALSCSQLARAALFLAFDGKDPVTRERIVTPQRCRRINAVMMTCGHYDNSGDFAFRIGLPGKSGVGGGVLVIAPGEGAIAVWSPGLNEAGTSTVGALALEALVEQTGWSV 305          
BLAST of mRNA_M-pyrifera_M_contig91037.21104.1 vs. uniprot
Match: A0A1B3N1F5_9SPHN (Glutaminase n=7 Tax=Sphingomonadales TaxID=204457 RepID=A0A1B3N1F5_9SPHN)

HSP 1 Score: 362 bits (928), Expect = 3.590e-123
Identity = 183/254 (72.05%), Postives = 209/254 (82.28%), Query Frame = 1
Query:   22 LGDADERFSIQSISKVFTLSMALRRVGDDVWKRVGREPSGSPFNSIVQLESERGIPRNPLINAGAIVITDHLVEQVGPDDMLADLLERLRTLSGDPSISIDPIVARSEAKAGARNRALASFMQSYGNLRNPVEATLTAYFSHCAISMNCRQLARAALFLAFDGRDPVSGQRLITSEFCRRINAVMMLCGHYDNSGDFAYRIGLPGKSGVGGGILAIAPRRGSIAVWSPGLNAAGTSLVGGLALEAFVQATGWSV 783
            LGD+ E FSIQSISKVFTLSMALR  G+DVW RVGREP+GS FNSIVQLE+E+GIPRNPLINAGAIV+TD LV     D M+ +LL R   LSGD +I ID  VA SE+  G+RNRALA FM ++GN+ NPVE  L AYF  CA+ M+CRQLARAALFLAFDG DP++ ++L+T E CRRINAVMM CGHYDNSGDFAYRIGLPGKSGVGGGIL IAP  G+IAVWSPGLNA+GTS+VG +ALE  V+ATGWSV
Sbjct:   52 LGDSHEPFSIQSISKVFTLSMALRHYGEDVWNRVGREPTGSAFNSIVQLENEKGIPRNPLINAGAIVVTDMLVAASNRDAMVQELLARFHRLSGDDTIGIDEEVAESESATGSRNRALAHFMAAFGNMANPVEDALHAYFRQCAVRMSCRQLARAALFLAFDGCDPINREQLVTRENCRRINAVMMTCGHYDNSGDFAYRIGLPGKSGVGGGILCIAPGHGAIAVWSPGLNASGTSMVGAIALEELVEATGWSV 305          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91037.21104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1P8WMK7_9PLAN2.770e-14479.15Glutaminase n=1 Tax=Fuerstiella marisgermanici Tax... [more]
A0A5B1CR39_9BACT7.770e-13976.63Glutaminase n=1 Tax=Rubripirellula obstinata TaxID... [more]
A0A5C6EHT6_9BACT1.570e-13876.54Glutaminase n=1 Tax=Rubripirellula reticaptiva Tax... [more]
A0A0J1ELI9_RHOIS1.020e-13574.62Glutaminase n=1 Tax=Rhodopirellula islandica TaxID... [more]
A0A1B6Z9Z3_9SPHN8.600e-12769.32Glutaminase n=1 Tax=Sphingomonadales bacterium EhC... [more]
A0A3D9FEF3_9SPHN1.330e-12571.15Glutaminase n=1 Tax=Parasphingopyxis lamellibrachi... [more]
UPI0015A13E773.790e-12570.38glutaminase n=1 Tax=Parasphingopyxis algicola TaxI... [more]
UPI00030A18E45.940e-12573.62glutaminase n=2 Tax=Sphingomonadaceae TaxID=41297 ... [more]
UPI0015A3F87C4.400e-12470.77glutaminase n=1 Tax=Parasphingopyxis sp. CP4 TaxID... [more]
A0A1B3N1F5_9SPHN3.590e-12372.05Glutaminase n=7 Tax=Sphingomonadales TaxID=204457 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91037contigM-pyrifera_M_contig91037:2..784 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score370.2
Seed ortholog evalue8.2e-100
Seed eggNOG ortholog1248760.ANFZ01000006_gene2373
Preferred nameglsA
KEGG rclassRC00010,RC02798
KEGG koko:K01425
KEGG ReactionR00256,R01579
KEGG Pathwayko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004359,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006543,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016053,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0040008,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0045926,GO:0046394,GO:0046395,GO:0048519,GO:0050789,GO:0065007,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607
EggNOG free text desc.Belongs to the glutaminase family
EggNOG OGs1MWB5@1224,2JZVC@204457,2TS8X@28211,COG2066@1,COG2066@2
EC3.5.1.2
COG Functional cat.E
BiGG ReactioniB21_1397.B21_01492,iECBD_1354.ECBD_2118,iECB_1328.ECB_01481,iECD_1391.ECD_01481,iYL1228.KPN_01636,iYO844.BSU02430
Best tax levelSphingomonadales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size783
Cds size783
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816822.94517-CDS-M-pyrifera_M_contig91037:1..7841622816822.94517-CDS-M-pyrifera_M_contig91037:1..784Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91037 2..784 +
1692278199.2078264-CDS-M-pyrifera_M_contig91037:1..7841692278199.2078264-CDS-M-pyrifera_M_contig91037:1..784Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91037 2..784 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91037.21104.1prot_M-pyrifera_M_contig91037.21104.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91037 2..784 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91037.21104.1

>prot_M-pyrifera_M_contig91037.21104.1 ID=prot_M-pyrifera_M_contig91037.21104.1|Name=mRNA_M-pyrifera_M_contig91037.21104.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=261bp
ADGAAHCLGDADERFSIQSISKVFTLSMALRRVGDDVWKRVGREPSGSPF
NSIVQLESERGIPRNPLINAGAIVITDHLVEQVGPDDMLADLLERLRTLS
GDPSISIDPIVARSEAKAGARNRALASFMQSYGNLRNPVEATLTAYFSHC
AISMNCRQLARAALFLAFDGRDPVSGQRLITSEFCRRINAVMMLCGHYDN
SGDFAYRIGLPGKSGVGGGILAIAPRRGSIAVWSPGLNAAGTSLVGGLAL
EAFVQATGWSV
back to top

mRNA from alignment at M-pyrifera_M_contig91037:2..784+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91037.21104.1 ID=mRNA_M-pyrifera_M_contig91037.21104.1|Name=mRNA_M-pyrifera_M_contig91037.21104.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig91037:2..784+ (Macrocystis pyrifera P11B4 male)
GCGGACGGTGCGGCGCATTGCCTCGGTGATGCGGACGAGCGTTTCTCGAT TCAAAGCATCTCGAAAGTCTTTACGCTGTCGATGGCGTTGCGCCGGGTCG GCGACGACGTGTGGAAACGGGTCGGGCGGGAGCCGTCCGGATCGCCGTTT AATTCGATCGTGCAGCTGGAAAGCGAACGCGGCATACCGCGCAATCCGCT GATCAATGCGGGTGCGATCGTGATCACCGATCACCTCGTGGAACAGGTCG GGCCCGACGACATGCTGGCGGACCTGCTCGAGCGCCTGCGCACGCTGTCC GGGGATCCGTCCATTTCGATCGACCCGATCGTCGCGCGCTCGGAAGCGAA AGCAGGGGCCAGGAATCGCGCGCTCGCGAGTTTCATGCAGTCCTACGGCA ATCTGCGTAACCCGGTGGAGGCGACGCTCACGGCCTATTTCTCACATTGC GCAATCTCGATGAACTGTCGGCAACTCGCGCGCGCGGCATTGTTTCTCGC ATTTGATGGTCGCGATCCGGTCAGTGGCCAGCGCCTGATCACGAGTGAGT TCTGTCGCCGCATCAATGCCGTGATGATGTTATGCGGTCATTACGACAAC AGCGGAGATTTCGCCTACCGCATCGGCCTGCCCGGCAAGAGCGGGGTCGG CGGCGGTATTCTTGCGATCGCGCCGCGGCGCGGGAGTATCGCGGTCTGGT CGCCGGGATTGAACGCAGCCGGAACCTCACTCGTCGGTGGGCTCGCGCTC GAAGCGTTCGTGCAGGCCACGGGCTGGTCCGTG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig91037:2..784+

>mRNA_M-pyrifera_M_contig91037.21104.1 ID=mRNA_M-pyrifera_M_contig91037.21104.1|Name=mRNA_M-pyrifera_M_contig91037.21104.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1566bp|location=Sequence derived from alignment at M-pyrifera_M_contig91037:2..784+ (Macrocystis pyrifera P11B4 male)
GCGGACGGTGCGGCGCATTGCCTCGGTGATGCGGACGAGCGTTTCTCGAT
TCAAAGCATCTCGAAAGTCTTTACGCTGTCGATGGCGTTGCGCCGGGTCG
GCGACGACGTGTGGAAACGGGTCGGGCGGGAGCCGTCCGGATCGCCGTTT
AATTCGATCGTGCAGCTGGAAAGCGAACGCGGCATACCGCGCAATCCGCT
GATCAATGCGGGTGCGATCGTGATCACCGATCACCTCGTGGAACAGGTCG
GGCCCGACGACATGCTGGCGGACCTGCTCGAGCGCCTGCGCACGCTGTCC
GGGGATCCGTCCATTTCGATCGACCCGATCGTCGCGCGCTCGGAAGCGAA
AGCAGGGGCCAGGAATCGCGCGCTCGCGAGTTTCATGCAGTCCTACGGCA
ATCTGCGTAACCCGGTGGAGGCGACGCTCACGGCCTATTTCTCACATTGC
GCAATCTCGATGAACTGTCGGCAACTCGCGCGCGCGGCATTGTTTCTCGC
ATTTGATGGTCGCGATCCGGTCAGTGGCCAGCGCCTGATCACGAGTGAGT
TCTGTCGCCGCATCAATGCCGTGATGATGTTATGCGGTCATTACGACAAC
AGCGGAGATTTCGCCTACCGCATCGGCCTGCCCGGCAAGAGCGGGGTCGG
CGGCGGTATTCTTGCGATCGCGCCGCGGCGCGGGAGTATCGCGGTCTGGT
CGCCGGGATTGAACGCAGCCGGAACCTCACTCGTCGGTGGGCTCGCGCTC
GAAGCGTTCGTGCAGGCCACGGGCTGGTCCGTGGCGGACGGTGCGGCGCA
TTGCCTCGGTGATGCGGACGAGCGTTTCTCGATTCAAAGCATCTCGAAAG
TCTTTACGCTGTCGATGGCGTTGCGCCGGGTCGGCGACGACGTGTGGAAA
CGGGTCGGGCGGGAGCCGTCCGGATCGCCGTTTAATTCGATCGTGCAGCT
GGAAAGCGAACGCGGCATACCGCGCAATCCGCTGATCAATGCGGGTGCGA
TCGTGATCACCGATCACCTCGTGGAACAGGTCGGGCCCGACGACATGCTG
GCGGACCTGCTCGAGCGCCTGCGCACGCTGTCCGGGGATCCGTCCATTTC
GATCGACCCGATCGTCGCGCGCTCGGAAGCGAAAGCAGGGGCCAGGAATC
GCGCGCTCGCGAGTTTCATGCAGTCCTACGGCAATCTGCGTAACCCGGTG
GAGGCGACGCTCACGGCCTATTTCTCACATTGCGCAATCTCGATGAACTG
TCGGCAACTCGCGCGCGCGGCATTGTTTCTCGCATTTGATGGTCGCGATC
CGGTCAGTGGCCAGCGCCTGATCACGAGTGAGTTCTGTCGCCGCATCAAT
GCCGTGATGATGTTATGCGGTCATTACGACAACAGCGGAGATTTCGCCTA
CCGCATCGGCCTGCCCGGCAAGAGCGGGGTCGGCGGCGGTATTCTTGCGA
TCGCGCCGCGGCGCGGGAGTATCGCGGTCTGGTCGCCGGGATTGAACGCA
GCCGGAACCTCACTCGTCGGTGGGCTCGCGCTCGAAGCGTTCGTGCAGGC
CACGGGCTGGTCCGTG
back to top