mRNA_M-pyrifera_M_contig910.21101.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig910.21101.1
Unique NamemRNA_M-pyrifera_M_contig910.21101.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig910.21101.1 vs. uniprot
Match: D8LPQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPQ3_ECTSI)

HSP 1 Score: 625 bits (1613), Expect = 4.270e-218
Identity = 320/551 (58.08%), Postives = 394/551 (71.51%), Query Frame = 1
Query:   31 VVALGVACLHPASAIETVDELIVSKYLGRWYQAYGNAFTARTIIRDSTCVAADYGLDQATGNITVINSSRVQIPTGELNTISGYAYGVDECEPGQLKVHLGQVPFDGDYWVVGLGPATFGSDGAYEWAIVSGPEAETLFILVRDVPSFEEKYAKEVLAFVHDLGFTGPEKEPQRIIQEGCLPFDP-----TTLAARKRTLGWADFLATTQWNEEDE--AAYASEMGENGHKLDWGGEDEEIASGYESGLEYASDLTEEGARVAAPFEPVVPVTALDVDRYTGRWYQAYSSYTVSTLLEQHGACVTADYAAQDDGSISVVNTARVKTTDGEVIKMDGYAYVEDASQPGKLTVHLDGVPVDAPYWILALGGEEEDGPYSWSIVSDPIRAFLFVLVRNPETFFGSQGEADLLAKCKDLGFTAFWNSPRKTEQDGCEYPATATAA-----IAEVGGKLGELSPVLKLRGG--GLGVKGPLHASCKMTVSFSKRGCQEVSDALVTAAKGMSDFDSCNGGNKCGYTVSKVSNGKAEFVHETSVKHYKDSLTFTFAEK 1641
            V+AL +A      AIETV +L V+KY+GRWYQ YGN FTAR I RD TCVAADYGLDQATGNITVINS R+ +PTG L TI G+AYG     PGQLKVHLG VP DGDYWVVGLGP TFG D  Y+WA+VSGP+AE+LF+LVRDV  FE+ YA++VL FV +LGFTG +KEPQR+IQEGCLPF P     TT   RK+ L W D L T +  + D+  A YAS+            ED    S +   L       EEG      ++PV PVT LD++RY+GRWYQ+Y+S+T  TLLE+ GACVTADY  + DGS+SVVNTAR  + DGE+++M G+AY +DAS+PG+LTVHLDG+PVD PYW+LA+G E+  G Y W+IVSDP RAFLFVLVR+      +Q + DL+AKC++LGFTA WNSPRKT Q+GC Y   + A      +AE GG    LS  L+LRGG  GLG+ GPLHASCKMT++F K  C EV++A+V++AK M  F++C GGNKCGYTV  V++G  + VHETSVKHYKD +TFT  +K
Sbjct:    3 VLALVLALATSGLAIETVPDLDVAKYIGRWYQLYGNTFTAR-ITRDGTCVAADYGLDQATGNITVINSERIGVPTGRLQTIEGFAYGTGPSNPGQLKVHLGDVPVDGDYWVVGLGPDTFGPDSLYQWALVSGPDAESLFVLVRDVREFEKTYARDVLEFVAELGFTGRDKEPQRVIQEGCLPFTPSSDSTTTANTRKKKLDWVDVLETLETLDWDKVGAGYASD------------EDVNAGSSWTDVLSQMQWDEEEGTWSLESWKPVEPVTELDINRYSGRWYQSYASFTAGTLLERQGACVTADYGVKADGSLSVVNTARTNSPDGELVEMTGHAYTKDASKPGQLTVHLDGLPVDGPYWVLAVGDEQGTGSYPWAIVSDPFRAFLFVLVRDT-----AQEDTDLVAKCRELGFTAPWNSPRKTVQEGCTYTEVSPAEDVAEDVAEEGGSAALLS-ALELRGGASGLGLGGPLHASCKMTIAFPKNSCSEVAEAIVSSAKDMMGFENCGGGNKCGYTVEDVADGNVKLVHETSVKHYKDDITFTLTDK 534          
BLAST of mRNA_M-pyrifera_M_contig910.21101.1 vs. uniprot
Match: UPI0018DA05B6 (uncharacterized protein LOC119736785 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018DA05B6)

HSP 1 Score: 221 bits (563), Expect = 4.160e-63
Identity = 150/423 (35.46%), Postives = 212/423 (50.12%), Query Frame = 1
Query:   73 IETVDELIVSKYLGRWYQAYGNAFTARTIIR-DSTCVAADYGLDQATGNITVINSSRVQIPTGELNTISGYAYGVDECEPGQLKVHLGQVPFDGDYWVVGLGPATFGSDGAYEWAIVSGPEAETLFILVRDVPSFEEKYAKEVLAFVHDLGFTGPEKEPQRIIQEGCLPFDPTTLAARKRTLGWADFLATTQWNEEDEAAYASEMGENGHKLDWGGEDEEIASGYESGLEYASDLTEEGARVAAP--FEPVVPVTALDVDRYTGRWYQAYSSYTVSTLLEQHGACVTADYAAQDDGSISVVNTARVKTTDGEVIKMDGYAYVEDASQPGKLTVHLDGVPVDAPYWILALGGEE-----EDGPYSWSIVSDPIRAFLFVLVRNPETFFGSQGEADLLAKCKDLGFTAFWNSPRKTEQ-DGCEYP 1314
            I TV EL +  Y+GRWYQ Y N +T  T    DS C  ADY +   T  ++V N+ R   P G+   I+G+AY  D  +PG+LKV L  VP  GDY ++ +GP     DG Y++A+V+      L++L R+  SF +KYA+EVL F+ + G+ G  K+PQ ++Q     +  T                     E  +  +A+ +                             L   G  +AAP    P   V  LD++ Y GRWYQ ++   V +  E++  CVTADYA   + +ISV N   V +  G    + GYAYV D SQPG+L V     PV   YW++ LG +E      D  Y +SIV+D +RA LFVL R+P+ F  S+ +AD+L   K   F  F+N P +T Q D C+YP
Sbjct:   19 IPTVSELDLKAYVGRWYQPYQNRWTKITNFDLDSVCTTADYKIINQTF-VSVYNAGREGWPEGKRRDIAGFAYIPDPSKPGRLKVVLEGVPAAGDYLIIKIGPII---DGQYQYAVVTSSGDRALYVLARNPISFLDKYAEEVLKFLDENGYQGFLKKPQPLLQATNCGYPET--------------------REIMDVLFAAVLA----------------------------LCLAGPSLAAPGYASPPKTVGELDLNSYLGRWYQMFADLVVDSTFERNAYCVTADYALNPNKTISVYNANTVGSPTGARNAIKGYAYVPDPSQPGQLLVKFPVTPVAGSYWVVQLGPKETTWRDSDPQYQYSIVTDSLRATLFVLARDPDDF-RSRFQADVLQWLKSNQFDHFYNKPVETVQTDDCKYP 388          
BLAST of mRNA_M-pyrifera_M_contig910.21101.1 vs. uniprot
Match: A0A8B7YCF9_ACAPL (uncharacterized protein LOC110978570 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YCF9_ACAPL)

HSP 1 Score: 218 bits (555), Expect = 1.020e-61
Identity = 149/421 (35.39%), Postives = 217/421 (51.54%), Query Frame = 1
Query:   73 IETVDELIVSKYLGRWYQAYGNAFTARTIIR-DSTCVAADYGLDQATGNITVINSSRVQIPTGELNTISGYAYGVDECEPGQLKVHLGQVPFDGDYWVVGLGPATFGSDGAYEWAIVSGPEAETLFILVRDVPSFEEKYAKEVLAFVHDLGFTGPEKEPQRIIQEGCLPFDPTTLAARKRTLGWADFLATTQWNEEDEAAYASEMGENGHKLDWGGEDEEIASGYESGLEYASDLTEEGARVAAPFEPVVPVTALDVDRYTGRWYQAYSSYTVSTLLEQHGACVTADYAAQDDGSISVVNTARVKTTDGEVIKMDGYAYVEDASQPGKLTVHLDGVPVDAPYWILALGGEEE-----DGPYSWSIVSDPIRAFLFVLVRNPETFFGSQGEADLLAKCKDLGFTAFWNSPRKTEQ-DGCEYP 1314
            I TV +L +  Y+GRWYQ + N +T    +  DS C  ADY +   T  ++V N+ R   P G+   I+G+AY  D  +PG+LKV L  VP  GDY ++ LGP     DG Y++A+V+      L++L R+  SF +KYA+EVL F+ D G+ G  K+P  ++Q        T     + + GW   L +   ++ +   Y +       K+       +I S        A  L   G    A F P   V+ LDV  Y GRWYQ ++   V +  E++  CVTADY    + +ISV N     +  G    + GYAYV + ++PG+L V     P+  PYW++ LG +E         Y +SIVSDP+RA LFVL R+P  F  S+ +AD+L   K   F  F+N P +T Q + C+YP
Sbjct:   19 IPTVTKLDLKAYVGRWYQPFQNRWTKIVNVDLDSVCTTADYKIINQTF-VSVYNAGREGWPEGKRRDIAGFAYIPDPSQPGRLKVVLDGVPTAGDYLIIKLGPII---DGQYQYAVVTSSGDRALYVLARNPISFLDKYAEEVLKFLDDNGYRGFLKKPLPLLQA-------TNCGYPESSGGW---LTSCVLSDTEYKLYTA------RKM------VKIFSAV-----VALCLAGTGLGAPAYFSPPKTVSELDVQSYLGRWYQMFADLVVVSTFERNADCVTADYGLNPNNTISVYNANTDGSPTGPRKAIKGYAYVPNKNEPGQLLVKFPVNPIPGPYWVIQLGPKETTWRNAQPQYQYSIVSDPMRAGLFVLARDPADF-RSRFQADVLQWLKVNQFDHFYNKPIETVQTEACKYP 407          
BLAST of mRNA_M-pyrifera_M_contig910.21101.1 vs. uniprot
Match: A0A3M6U9J3_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6U9J3_POCDA)

HSP 1 Score: 184 bits (466), Expect = 8.250e-50
Identity = 131/407 (32.19%), Postives = 190/407 (46.68%), Query Frame = 1
Query:  130 YGNAFTARTIIRDSTCVAADYGLDQATGNITVINSSRVQIPTGELNTISGYAYGVDECEPGQLKVHLGQVPFDGDYWVVGLGPATFGSDGAYEWAIVSGPEAETLFILVRDVPSFEEKYAKEVLAFVHDLGFTGPEKEPQRIIQEGCLPFDPTTLAARKRTLGWADFLATTQWNEEDEAAYASEMGENGHKLDWGGEDEEIASGYESGLEYASDLTEEGARVAAPFEPVVPVTALDVDRYTGRWYQA---------YSSYTVSTLLEQHGACVTADYAAQDDGSISVVNTARVKTTDGEVIKMDGYAYVEDASQPGKLTVHLDGVPVDAPYWILALGGEE-EDGPYSWSIVSDPIRAFLFVLVRNPETFFGSQGEADLLAKCKDLGFTAFWNSPRKTEQDG-CEYPA 1317
            Y +     T  R++ CV ADY L +    I V+N  R+  PTG+ ++I+GYAY  D  EPG+L +HL  VPF G YWVV LGP TFG  G Y++++V+  +   LF+L RDV +F+ +Y +E      D+ +T                                 FL          A ++S                  A G ++                        V +L+V +Y GRWYQ           + Y + TL              + DG + V+N+ R++T  GE   + GYAY+ D +QPGKL VHL GVPVDAPYW++ LG     +G Y +S+V+D ++  LFVL R+ +TF  SQ + ++     + GFT F+N P  T Q+  C Y A
Sbjct:    2 YADPAVMATSERNAVCVTADYSL-RKDEKIGVLNRGRLYTPTGKESSITGYAYMTDPKEPGKLTLHLDGVPFLGSYWVVKLGPPTFGEKGLYQYSVVTDSKQIMLFVLTRDVETFKSQYDEEHCRSEVDMKYTV--------------------------------FLV---------AVFSS-----------------CAFGIDT------------------------VPSLNVTKYLGRWYQVKNVCMYRFGVNDYVIDTL--------------EKDGKVGVLNSERLRTPTGEGKNITGYAYIPDPNQPGKLKVHLGGVPVDAPYWVVKLGPPTFGEGLYQYSVVTDNLQITLFVLARDVDTF-KSQYDEEVRNWLTENGFTRFYNKPVATLQNKECIYVA 310          
BLAST of mRNA_M-pyrifera_M_contig910.21101.1 vs. uniprot
Match: A7SH62_NEMVE (Predicted protein (Fragment) n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SH62_NEMVE)

HSP 1 Score: 157 bits (398), Expect = 4.880e-42
Identity = 78/164 (47.56%), Postives = 102/164 (62.20%), Query Frame = 1
Query:  823 VTALDVDRYTGRWYQAYSSYTVSTLLEQHGACVTADYAAQDDGSISVVNTARVKTTDGEVIKMDGYAYVEDASQPGKLTVHLDGVPVDAPYWILALGGEEEDGPYSWSIVSDPIRAFLFVLVRNPETFFGSQGEADLLAKCKDLGFTAFWNSPRKTEQ-DGCEY 1311
            V AL++  Y GRWYQ Y+   V    E++  C TADY  + DG I V N+ RVKT DGEV  + GYAY +D   PGK  +H D VPVD  YW++ LG    DG Y +SIV+D     LF+L R+P T+  S+   +++A CK+ GFT FWN PRKT Q + C+Y
Sbjct:    3 VPALNITSYAGRWYQMYADLIVDETYERNSVCTTADYTLRKDGKIGVHNSGRVKTPDGEVKAISGYAYRKDPKVPGKFVLHFDSVPVDGSYWVVKLG-PVSDGQYQYSIVTDSTTLQLFILSRDPSTY--SKYNDEVMAFCKENGFTHFWNKPRKTYQSEDCKY 163          
BLAST of mRNA_M-pyrifera_M_contig910.21101.1 vs. uniprot
Match: A0A2B4SE72_STYPI (Apolipoprotein D n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SE72_STYPI)

HSP 1 Score: 157 bits (396), Expect = 3.190e-41
Identity = 79/172 (45.93%), Postives = 114/172 (66.28%), Query Frame = 1
Query:   49 ACLHPASAIETVDELIVSKYLGRWYQAYGNAFTARTIIRDSTCVAADYGLDQATGNITVINSSRVQIPTGELNTISGYAYGVDECEPGQLKVHLGQVPFDGDYWVVGLGPATFGSDGAYEWAIVSGPEAETLFILVRDVPSFEEKYAKEVLAFVHDLGFTGPEKEPQRIIQE 564
            A ++ A  I+TV +L V+KYLGRWYQ YG+     T  RD+ CV ADY L +  G + V+NS R++ PTGE   I+GYAY  D  EPG+LKVHLG  P D  YWVV LGP TFG++G Y++++V+     TLF+L RDV +F+ ++ ++V +++ + GFT    +P   +Q+
Sbjct:   10 AFINCAFGIDTVPKLNVTKYLGRWYQMYGDPTVMATFERDAVCVTADYTL-RKDGKVGVLNSERLRTPTGEGKNITGYAYIPDPKEPGKLKVHLGGTPVDAPYWVVKLGPPTFGAEGLYQYSVVTDNLQITLFVLARDVDTFKSQFDEQVQSWLVENGFTRFYNKPVATLQD 180          
BLAST of mRNA_M-pyrifera_M_contig910.21101.1 vs. uniprot
Match: UPI000A2A5FF2 (temperature-induced lipocalin-1 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A5FF2)

HSP 1 Score: 152 bits (383), Expect = 2.540e-39
Identity = 74/172 (43.02%), Postives = 107/172 (62.21%), Query Frame = 1
Query:   46 VACLHPASAIETVDELIVSKYLGRWYQAYGNAFTARTIIRDSTCVAADYGLDQATGNITVINSSRVQIPTGELNTISGYAYGVDECEPGQLKVHLGQVPFDGDYWVVGLGPATFGSDGAYEWAIVSGPEAETLFILVRDVPSFEEKYAKEVLAFVHDLGFTGPEKEPQRIIQ 561
            V  + P   I+TV  L +++YLGRWYQ YG+     T  ++  C+ ADY + +    I V+NS R++ PTG L+ I+GYAY  D  EPG+LKVH    P DGDYWV+ LGP +FG D  Y++++V+     TLF+L RD  +F+  Y KEV+ F+++ GF     +P  I+Q
Sbjct:   12 VVVVEPCLGIDTVXALNITRYLGRWYQMYGDKIVMSTFEKNGVCITADYTV-RKDEKIGVLNSQRIKTPTGNLSQITGYAYVPDPKEPGKLKVHFDVSPVDGDYWVIKLGPQSFGEDKKYQYSVVTDRLGLTLFVLARDPQAFKNDYDKEVITFLNEKGFDHFWDKPIAILQ 182          
BLAST of mRNA_M-pyrifera_M_contig910.21101.1 vs. uniprot
Match: A7SH61_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SH61_NEMVE)

HSP 1 Score: 151 bits (381), Expect = 4.000e-39
Identity = 79/174 (45.40%), Postives = 104/174 (59.77%), Query Frame = 1
Query:  793 VAAPFEPVVPVTALDVDRYTGRWYQAYSSYTVSTLLEQHGACVTADYAAQDDGSISVVNTARVKTTDGEVIKMDGYAYVEDASQPGKLTVHLDGVPVDAPYWILALGGEEEDGPYSWSIVSDPIRAFLFVLVRNPETFFGSQGEADLLAKCKDLGFTAFWNSPRKTEQ-DGCEY 1311
            V  P + +  V  L+V  Y GRWYQ YS + V    E++  CVTADY  + DG I VVN+ R K  DGE+ ++ GYAY  D   PGKL VH D VPV+  YWIL LG     G Y +SIV+D ++A LFVL R+P  +   + + ++    K+ GFT  WN PRKT Q + C+Y
Sbjct:   12 VCGPCQGIDTVPTLNVTSYLGRWYQMYSDFIVEETFERNAVCVTADYTLRKDGKIGVVNSNRDKKPDGELKQITGYAYQPDPEVPGKLKVHFDTVPVEGSYWILKLG-PVSGGQYQYSIVTDGLKATLFVLSRDPNNY--EKYDKEIQEFLKNNGFTHLWNKPRKTYQSEDCKY 182          
BLAST of mRNA_M-pyrifera_M_contig910.21101.1 vs. uniprot
Match: UPI000F551639 (temperature-induced lipocalin-1-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F551639)

HSP 1 Score: 151 bits (381), Expect = 4.370e-39
Identity = 79/166 (47.59%), Postives = 108/166 (65.06%), Query Frame = 1
Query:   64 ASAIETVDELIVSKYLGRWYQAYGNAFTARTIIRDSTCVAADYGLDQATGNITVINSSRVQIPTGELNTISGYAYGVDECEPGQLKVHLGQVPFDGDYWVVGLGPATFGSDGAYEWAIVSGPEAETLFILVRDVPSFEEKYAKEVLAFVHDLGFTGPEKEPQRIIQ 561
            A  I+TV  L V+KYLGRWYQ Y +     T  RD+ CV ADY L++  G + V+NS R++ PTGE   I+GYAY  D  +PG+LKVHLG VP D  YWVV LGP TFG +G Y++++V+     TLF+L RDV +F+ +Y +EV  ++ + GFT    +P   +Q
Sbjct:   15 AFGIDTVPSLNVTKYLGRWYQMYADPSVMATFERDAVCVTADYTLEKD-GKVGVLNSERLRTPTGEGKNITGYAYIPDPNQPGKLKVHLGGVPVDAPYWVVKLGPPTFG-EGLYQYSVVTDNLQITLFVLARDVDTFKSQYDEEVRNWLTENGFTRFYNKPVATLQ 178          
BLAST of mRNA_M-pyrifera_M_contig910.21101.1 vs. uniprot
Match: A0A2B4SGV8_STYPI (Outer membrane lipoprotein Blc n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SGV8_STYPI)

HSP 1 Score: 152 bits (384), Expect = 7.520e-39
Identity = 79/172 (45.93%), Postives = 108/172 (62.79%), Query Frame = 1
Query:   49 ACLHPASAIETVDELIVSKYLGRWYQAYGNAFTARTIIRDSTCVAADYGLDQATGNITVINSSRVQIPTGELNTISGYAYGVDECEPGQLKVHLGQVPFDGDYWVVGLGPATFGSDGAYEWAIVSGPEAETLFILVRDVPSFEEKYAKEVLAFVHDLGFTGPEKEPQRIIQE 564
            A L  A  I+TV  L V+KYLGRWYQ Y +     T  R++ CV ADY L +  G I V+N  R+  PTGE ++I+GYAY  D  EPG+L +HL  VPF G YWVV LGP TFG +G Y++++V+      LF+L RDV +F  +Y +EV +F+ + GFT    +P   +Q+
Sbjct:   63 AFLSCAFGIDTVPSLNVTKYLGRWYQMYADPAVMETSERNAVCVTADYSL-RKDGKIGVLNRGRLYTPTGEESSITGYAYMTDPKEPGKLTLHLDGVPFLGSYWVVKLGPPTFGVEGLYQYSVVTDSTQIMLFVLTRDVETFRNQYDEEVKSFLAENGFTHLYNKPVATLQD 233          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig910.21101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPQ3_ECTSI4.270e-21858.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI0018DA05B64.160e-6335.46uncharacterized protein LOC119736785 n=1 Tax=Patir... [more]
A0A8B7YCF9_ACAPL1.020e-6135.39uncharacterized protein LOC110978570 n=1 Tax=Acant... [more]
A0A3M6U9J3_POCDA8.250e-5032.19Uncharacterized protein n=1 Tax=Pocillopora damico... [more]
A7SH62_NEMVE4.880e-4247.56Predicted protein (Fragment) n=2 Tax=Nematostella ... [more]
A0A2B4SE72_STYPI3.190e-4145.93Apolipoprotein D n=1 Tax=Stylophora pistillata Tax... [more]
UPI000A2A5FF22.540e-3943.02temperature-induced lipocalin-1 n=1 Tax=Exaiptasia... [more]
A7SH61_NEMVE4.000e-3945.40Predicted protein n=1 Tax=Nematostella vectensis T... [more]
UPI000F5516394.370e-3947.59temperature-induced lipocalin-1-like n=1 Tax=Pocil... [more]
A0A2B4SGV8_STYPI7.520e-3945.93Outer membrane lipoprotein Blc n=2 Tax=Stylophora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig910contigM-pyrifera_M_contig910:20547..31202 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score629.4
Seed ortholog evalue1.6e-177
Seed eggNOG ortholog2880.D8LPQ3
KEGG koko:K03098
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.negative regulation of lipoprotein oxidation
EggNOG OGsCOG3040@1,KOG4824@2759
Ec32 ortholog descriptionCalycin
Ec32 orthologEc-18_002060.1
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147
Exons11
Model size1647
Cds size1647
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816822.698658-CDS-M-pyrifera_M_contig910:20546..206721622816822.698658-CDS-M-pyrifera_M_contig910:20546..20672Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 20547..20672 +
1692278199.0119383-CDS-M-pyrifera_M_contig910:20546..206721692278199.0119383-CDS-M-pyrifera_M_contig910:20546..20672Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 20547..20672 +
1622816822.710411-CDS-M-pyrifera_M_contig910:21227..212991622816822.710411-CDS-M-pyrifera_M_contig910:21227..21299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 21228..21299 +
1692278199.0285618-CDS-M-pyrifera_M_contig910:21227..212991692278199.0285618-CDS-M-pyrifera_M_contig910:21227..21299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 21228..21299 +
1622816822.7213807-CDS-M-pyrifera_M_contig910:22191..222711622816822.7213807-CDS-M-pyrifera_M_contig910:22191..22271Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 22192..22271 +
1692278199.0408638-CDS-M-pyrifera_M_contig910:22191..222711692278199.0408638-CDS-M-pyrifera_M_contig910:22191..22271Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 22192..22271 +
1622816822.7323878-CDS-M-pyrifera_M_contig910:23034..231841622816822.7323878-CDS-M-pyrifera_M_contig910:23034..23184Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 23035..23184 +
1692278199.0517528-CDS-M-pyrifera_M_contig910:23034..231841692278199.0517528-CDS-M-pyrifera_M_contig910:23034..23184Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 23035..23184 +
1622816822.7439187-CDS-M-pyrifera_M_contig910:27566..277441622816822.7439187-CDS-M-pyrifera_M_contig910:27566..27744Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 27567..27744 +
1692278199.0647507-CDS-M-pyrifera_M_contig910:27566..277441692278199.0647507-CDS-M-pyrifera_M_contig910:27566..27744Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 27567..27744 +
1622816822.7552643-CDS-M-pyrifera_M_contig910:28108..283691622816822.7552643-CDS-M-pyrifera_M_contig910:28108..28369Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 28109..28369 +
1692278199.0745404-CDS-M-pyrifera_M_contig910:28108..283691692278199.0745404-CDS-M-pyrifera_M_contig910:28108..28369Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 28109..28369 +
1622816822.7660854-CDS-M-pyrifera_M_contig910:28710..288201622816822.7660854-CDS-M-pyrifera_M_contig910:28710..28820Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 28711..28820 +
1692278199.0853472-CDS-M-pyrifera_M_contig910:28710..288201692278199.0853472-CDS-M-pyrifera_M_contig910:28710..28820Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 28711..28820 +
1622816822.776789-CDS-M-pyrifera_M_contig910:29378..295261622816822.776789-CDS-M-pyrifera_M_contig910:29378..29526Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 29379..29526 +
1692278199.0983074-CDS-M-pyrifera_M_contig910:29378..295261692278199.0983074-CDS-M-pyrifera_M_contig910:29378..29526Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 29379..29526 +
1622816822.787274-CDS-M-pyrifera_M_contig910:29845..301511622816822.787274-CDS-M-pyrifera_M_contig910:29845..30151Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 29846..30151 +
1692278199.1115143-CDS-M-pyrifera_M_contig910:29845..301511692278199.1115143-CDS-M-pyrifera_M_contig910:29845..30151Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 29846..30151 +
1622816822.799692-CDS-M-pyrifera_M_contig910:30722..308261622816822.799692-CDS-M-pyrifera_M_contig910:30722..30826Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 30723..30826 +
1692278199.1248946-CDS-M-pyrifera_M_contig910:30722..308261692278199.1248946-CDS-M-pyrifera_M_contig910:30722..30826Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 30723..30826 +
1622816822.81065-CDS-M-pyrifera_M_contig910:31090..312021622816822.81065-CDS-M-pyrifera_M_contig910:31090..31202Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 31091..31202 +
1692278199.1348598-CDS-M-pyrifera_M_contig910:31090..312021692278199.1348598-CDS-M-pyrifera_M_contig910:31090..31202Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig910 31091..31202 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig910.21101.1prot_M-pyrifera_M_contig910.21101.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig910 20547..31202 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig910.21101.1

>prot_M-pyrifera_M_contig910.21101.1 ID=prot_M-pyrifera_M_contig910.21101.1|Name=mRNA_M-pyrifera_M_contig910.21101.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=549bp
MARSLLQFLAVVALGVACLHPASAIETVDELIVSKYLGRWYQAYGNAFTA
RTIIRDSTCVAADYGLDQATGNITVINSSRVQIPTGELNTISGYAYGVDE
CEPGQLKVHLGQVPFDGDYWVVGLGPATFGSDGAYEWAIVSGPEAETLFI
LVRDVPSFEEKYAKEVLAFVHDLGFTGPEKEPQRIIQEGCLPFDPTTLAA
RKRTLGWADFLATTQWNEEDEAAYASEMGENGHKLDWGGEDEEIASGYES
GLEYASDLTEEGARVAAPFEPVVPVTALDVDRYTGRWYQAYSSYTVSTLL
EQHGACVTADYAAQDDGSISVVNTARVKTTDGEVIKMDGYAYVEDASQPG
KLTVHLDGVPVDAPYWILALGGEEEDGPYSWSIVSDPIRAFLFVLVRNPE
TFFGSQGEADLLAKCKDLGFTAFWNSPRKTEQDGCEYPATATAAIAEVGG
KLGELSPVLKLRGGGLGVKGPLHASCKMTVSFSKRGCQEVSDALVTAAKG
MSDFDSCNGGNKCGYTVSKVSNGKAEFVHETSVKHYKDSLTFTFAEKV*
back to top

mRNA from alignment at M-pyrifera_M_contig910:20547..31202+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig910.21101.1 ID=mRNA_M-pyrifera_M_contig910.21101.1|Name=mRNA_M-pyrifera_M_contig910.21101.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10656bp|location=Sequence derived from alignment at M-pyrifera_M_contig910:20547..31202+ (Macrocystis pyrifera P11B4 male)
ATGGCGAGATCTCTGCTCCAGTTCTTAGCTGTGGTGGCCCTGGGCGTCGC TTGTCTGCACCCAGCCTCTGCGATCGAGACAGTTGATGAACTGATCGTCA GCAAATACCTCGGACGTTGGTATCAGGTAAGAGAAGCAAATTGATGTTTT CCAGCCCACTTCGTATTATACTCGTATTTATACGAGTATAGCAGTTTTTT TGCCAGGTAGACGATAAAAAGAACCACCCGGTCTGCGCTCTCAAGGCGTA AATATCCTATTACGGGACCACAGTATAGTTAATAGGACCTCCGGCACACA ATAAAATCTATATATTTACCTATTTTTACTAACAATACTTAGTCCTATTT ACTCATTGTATGCCCCCCCGTAATAGCTCGATCCAAGGAACGTGTTTTTT AGCTACTGGGAGAGCTACTGTTACCTACCCGGCGAAAGAGTACGTGGATG TACGTAGAGTCTATAGATAGCACCAATAGTAGAGTCGGGATGTCGAACTT CGAGAACTACCCTCTGGTACCTACCTACCTGGTACAAAGTCACATGCCTC TTACATGTACTGATACGTCGATGTTTATTACTGATAATTCAATGTTCTAC TATATATAGAAACATGCAAGTCTGGCTGAGCGACACTGCATATAACATGT ACCCTCCTGACATGCGTGCTGTCATTTCCAGGCGTACGGGAATGCCTTCA CGGCCCGGACGATTATCCGTGACAGCACGTGTGTTGCTGCGGACTACGGC CTGGTGAGTCAGGACTGCTTGTGATGAGTCACTGCGATAAAATACGTGAA AATTAAAATTATTTGCAAAATACCGTTCGTATATTCGTACGTAAAAAAAA AAAAAAAAAAAAAAAAAAAGAGAAACACGGGGGCGGGGTCGACAAAAAAA AAAAAAAAAAAAAAAGAGAAAAAAAAAAAATAAAAACAAAAAAAGAAGGG AGGAAAGANNNNNNNNNNATATTAAAATTAATGAAAAAACACAATACGTA GATACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGAGAATCACGGG ACCGGCTTCGACAGTAGTCGATCGACACGTGGTGGCGTGTACGGACGTAT TATATCATACATAGCAGGTATCATACAATATGTACGTACGTACGGGTACA TATATTATACCTCTGGTACTCTGTATTTGTAAGAGTTGTATAATAGCACC CCAACCAGTACCAGGTGCGGTACTGCTGTTTATAATGTACCAGGTATGAT AATGATACGTCTGTTAGAGTTGTATAATAGCACCCCAACCAGTACCAGGT GCGGTACTGCTGTTTATAATGTACCAGGTATGATAATGATACGTCTGTTA TTGGGGACGATACGCTGTTCGTACGATTATTATAGAGTAAATACCGTAGT ATATACCTCGCAATTAGTACCAAGGCATGGAAATACGACGTAGTCCTCGA AAACGGACGCATGCAGCACGAAGATCGCTCGTCGAGCGTTGACGACAGCA GTGGTTCCAACTCTGTAATGCTTGAGATGTCCTCCGACCACCCGTATCAA TTATCGGCGAAGCTCGGAACGCACAGGTATGTTTGCCGTTGAAGCCACCT GCGTTGTCCCGAACCCCCCGCCTCTACGTCTTCGACTGAAAATAGGATCA AGCTACGGGTAACATTACCGTCATCAACTCCAGCCGTGTGCAGATACCCA CCGGCGAGCTCAACACTATTTCGGGGTGAGATTTCGTCGTTTGACGACAT CAATCGCGTCCTATGTTTCACGCGCGTTCTGAGTCATTCGGATGGCCGGT GTATCATAATATTATTTTTTATTGAGAAGATGGATGCCCAGGCTTGGCCA TGTCGACCTTCGGAAGATTGCCGGGCCTTTGCGCGAGTTTGCACCGCCTT CGAGCCAGCCAATGCCGCTGCTTCCCTCTGACTACAATCAGCACGTGCCG TACTGATGTACGACTTCTCACAGAGCGTGCCGTACTGATGTGCGAAATCT CACAGAGTCTGTACGGGACGGCGGCCAAATTTGCAACCTCTGCGGGGCTT TTCTCAATGTCTAGTTTCGTTTCTATACGAAACATCCCCGCGAATTCGCG GGACCCCTGTCAGCTGTCACCTGGCACACGCTAACCCCTCCAGGACACCC CCCCCTTTTCGGCAACAATATTTTTGGAAGTAGAGTCAAACAAATGTTTC TGCACAGCCAGGGCAGCAGTACAACGAAGTATGTTGTCCCGCCCTGGTAG CTTGGGTACAGCAGTGGTACATGCATTGACGGTTGCAATAGTACAATGGC TTTTTTTCGGGGAGGGGTTTCGCGTAGCGGCAACAATCACTTCGCCAGTA ACCCGCAAGGCCACAAGGTCACCATGCAAGGCGACTATCCATGGCAAACA CATTGCCTGCGCTTTTACGAGTAGCTCGTTGACTCTGCTCCATCGCATGC GTTGGTGTGCCGTACCGTACCGTGCTGCCGTGCTACAGGTACGCATACGG CGTGGACGAGTGTGAGCCGGGGCAGCTGAAAGTGCACCTTGGGCAGGTTC CGTTCGACGGCGACTATTGGGTTGTCGGTCTCGGGCCTGCTACCTTTGGC TCTGATGGGGCGTACGAGTGGGCTATCGTCAGTGGACCGTGAGTGCGTTG CCTATGTTACGTGCACCCGCATAGCCTTGTTATTCAACAATCAGTTGAGC CTGGTCCAAGCTGCACCCGCTTGCGCTGTTGTACATGCCGCTCGTCTGTG TGTATTGCTTTGTTTTTTACCCTTTATACAACAATCATAACACCAGCCTC TGACATAACGTCAACTTTACCTAACTGGAGGTCGTTTCAGCCGGGCTGGG TGCAGTAACTGTCCCTCATTGAATAAACCGAATACCTTTTCCTCAAACTG TACTGTTTGGCTGCTCAAGGTATATTGACATTAAAAAAATGCGAACGCCG GAAATGGGCAGAAATTTCCAAGGCTCTTCATGGTTTATTGCCGGGGTGGT ATTGACGGTAACGGCGGACGGGACAAAACGGGACGGTAAAACCGTCGTCA AATTGGTACCGGGGTCCCGTCCCGTCGCCAATTCCGCCTGCCGTTGACTC GTACCGTCTCGTCCCACCGAGAAAACATCTCCCGTTCTACTTGGCCATCC CGTCCCGCCGTCAAAACCTGCTCTACCATCCCATCACGTCAATTCCGTCA CTCCTTCCCGTCAAGAAACCATGAATACCAGAGTAATACTCCTTCTGCCC GTTATATATCAGGAGACGGCAGTTTAGGCCTGTGACAGACGGGCATCTGG AAATACTACGTACGTAGTTGACCAGGAAAGTTGAAAGGGTTTCAGCCAAA TCAGGTATACCTGGCCACTTTTGGGCCAAAATCACTAACGTATTAAAACC GAGTACCAACCACACACCAGGAGCCCTGCTATTGGCCAGACTGACATCGT ACTGATTTTGGCCAATTTTGAACTAATCAGAGAGGCCATATGTCCACTCT TTTTCTCTGCGTATGCGTCACACCCTGTACAATAGACAATGGCCACTGCA ATAGCAATAGCAATAAAATATGGCGCAATGGACGTGCCTAGTACCATCGG TATAGTGTCTATCGATTTACTACTCCCTCAGTCTAATGTCGCCGGAAAAG GCTATCGGTTGGCCTACTTCCCCATACATTGTCGTCGCTATTAAAAATAG CTATCGATGGATCACATCCCCAATCCATTGTCACTGGTAGTGGTTATCGA CTGGGTGTCCCACAATCTATTGTGGCAGGCGATGTATATCGATGGAACAC ATCCCCAATCTATTGTCACCGACAATAGCCATCGATGGATACGCCCCGCA ACCTATTGTGGCAACAATGTCCATCGATGGATCGCATCCCCAATCTATTG TGGCAGGCAATGCTTGTCGATTGTTGCCGTCCTCAAATCTATTGTCACCG ACAGCAGTGTCCATCGGTGGGCACGGCTCACCACCTACTACTGCAGTCGG CAGTGTGTATCGATCGACACACGTACAACGTACTCTGCTGAGCACAGCGA GGTATCTATTGTGTAACGGCAGCCGTATAATATGTATTGCGACGACAGCA GTAAAAATAATTCGTGCATGATTTATCTTGACAACACTTGACACACGACA ATGGGTGTATGGCACGGTAGATCGTGATTACTTTTTCTTAGCTATATACA TAGGCCAACCGATGAAACAGGAAGCATGGATGGGCGTTTCGATGAATATT TATCACAATCTCAACTGTTTATATAAACGTGGTTTTCGATCCTAGACAAC AAACAACAGCCGCTGCAGCAAATAGTAGGGGTATAATGTAGTGCAAGGGA CGCGTATATTGCTGCGGGCAATGTCTATCTACTATTTATTGTTGCCGTCC TCAATTTGTTGTGACTGACAATGGCTATCGATGGACAGACTTCATTGCGG GTGGCAATGGTCAGCGATGGACGCGGTGCACAACCTACTGTCGTTGGCAA TATATATCGACAGAGTCCCCCCCCCGTCTACTGTCACTGCCGATATAAAT CGATAGTTTCCCCCCCGTCTATTGCCGCTGGCAATATATATCGATATATT TTCCCCTCGCCTATTGACGCTGGCAATATATATCGATTCATTTTCCCCTC GTCTACTGTTGCCGGCAATATCTATCGATATTTTCTGTCGCCTAATGTCG CTGGCAATATCTATCCCATATATTTTCCTCTTGTCTATTGTCGCTGGCAA TATCTATTGATGGGTTTCCCTCGCCTATTGTCGCTGGCAATAGACCATGG TGTGTCTTTAGTCCAGGGTGTGGTCATGCGTCTGCGGTCTCTCGGTTGGT TATTAATACTTCATGTTCATGTCTAATCGGACAAGTGTGTATGATCTGAT GATAATCATGATATGATACCGATCACACCACGGCCGTGCTCGACACTCGA CGCCGATATGCCGTATGTCCACTGTTTCTTCTTTGCGTATGCGTCTGCGG TCCCTCGATTGCAATTCATGTGTATAAACGTATAAATTCTGTACTCGTGC GTATGGACGTACTTATAGGACGTATTTGTACTCGCATACGTACGCTGATT TCACTTTTTATTCTTTGGGGTGTACGATGTGCTTCAGTTGTTGTGATACT CTGTTGTTTTCTCATGGTTGCAGGAGTCATATTACAGCACCGTGCACAAA TACACAGCTGCAGTGATTCGTCGAGGTGGTCTCAAGTTTGGTATGGCAAG ATAATTTCGTGCCGAGCAGGCGGTTCCGCGAGAATGGTCGAGAAGTTTCA AAACTGGCAACTGGGGGGGGTGCCAGAATAAAAAGTGTTGGCGCTCCCGT CGTAGCGAAACAAACGAAGCCCGGTGACCCTCTGCAGATCCAAGTGAGGC CCGTGGTAACTATACCCTAAAGAAATAAAGCAATTCAGATTTCGGAGGCT ACACGCTTGATGTTTAGGCGTTTTTTTATGAATTTTCATGGACAGAACAC CGTTCGTGGCGCCCGTTTTTTACTTGGTTTTAGCATTCCCTGATGACCCC AGTGGATCTGGTATACCTGATTTTGGCCACAGCCCTTGTTGTTTTATCCA TGACGGGACGGGACGGTAAATACAAATACGGGACAGGGCAGTAGTTTTTC TTCGCTCGACGGGGCTGGACGGCATATAACGTTTTCCACGACCGGACTGG GCGGCACATAGGTTTTTCACGAGGGGACCGGACGGCACGTAAATTCCAGA CGGGCGAGGTCACTTTTCGACCCGGACCCCAAGAACGGTTGCGGCGCCAG CTTGAGCTGTTCTGCTGGCTGTGCTTTCTTTGTGATGCGAGTCGTTGGCT GTTCTTGTGGCTGGGCTGCTTTTGCTGTACTGTGGAGCAGGTGGTTGCGG TTGTGTGTGGTGGTGGTTGATGTGGTGGTGCTGCTGGCTGCTCGGCCACA GCCGTAAAAGGTACGTATGAGTAGTACGTATGATCGATGATACAGGTGTC GAGTGTCGAGGACGGCCGTAGAGGTGTGATCCGTATTACATCATCGTATC ATGATATTATCATACCAGTATCATACACACTTGTCCGACCGAGAAACCGC AGACGCATACGCAAAGAAAAAAGAGTGGACATGTGGCCTCTTTGGCTCAA AATTGGCCAAAATCAGTTGAAAGCTACAGGACACAGTCAGATGTAACTTG GCCTTTCCGAGCCAAAATCAGATACGATGTCAGTCTGGCCAGTAACAGGG CTCCTGGCGTGTGATGTGTACTTGTTTTTAGTACGATTTTGATTCCGGCC CAAAAGTGGCCAGGTATACTCGTACCTGATTTTGGCTAAAACCCTAAAAA AAACCGTCCCGTCCCGTCGAGAAATTTCACACAAATCGTTCCGTCCCGTT CAGCCAACTACCCAATTACCTGGAATACTGTTCATTATTTTGCCGTCCCG TCTTCGAGTTTTGTCACGCCACAGTCCCGTCCCGTCTCTAATATTATCAG CCATTAAAAGCGTTGCAAATTCCGGCTATAATAATGGCATTGTAAAAATG CTAGCGATGGAAACGGGCAGCAATTTTGGCATAATAAGTGTACGGCCGGA TGACGTGACTGAGCCCAGACAGGACCACCATATGATCAGTGTCCGCGCTC CTAAGCTGCGTCCGGTTATCTACAGTAAAGAAGTGGTGGCAGTGTCTCAC TTTGGCACGACGTCAGTCGCGCAAACGCCAACCTACTCACCGGCGCCCGT CCTGGGTTTGCTGGAACGAAAAATATATTGTGTGCTCTAGGGTACACTGT TTACACGCATGGTCGTGTTTGGCACGCCTCGGGCCTCGCTCATGTACAGT AGTGTCCTGCTGTGCTCGTGGCTAGCGAGCAACTCACAATCTCATCGTGA ACAGCCAATACACAAGGTAGCCCGCCAACCGTGCACACCCCGGGCAGCTC TCCCTTAACCTCCGCACCCCCCTGTTGGACGTCGAATGCATCGCACGAAT CTTGTATCCTTCTTTCGTAGCGAGGCAGAGACCCTGTTCATCCTGGTGCG TGACGTGCCAAGCTTTGAAGAAAAGTACGCGAAGGAAGTGTTGGCCTTCG TCCATGACTTGGGCTTTACCGGCCCGGAGAAAGAGCCTCAGCGTATCATC CAGGAGGGCTGCTTGCCCTTCGATCCCACCACCTTGGCGGCGAGAAAGGT CGGCGATTCGCGCGACGACGGATTTTTTTGTTTATCCCTGGCGATGCGTG GTGTCAGGCTGTGCGCGTTTCGTGTGATTTCCCGGGAGGTTTACGAGTTC ATGCGCTCACGAATTTTTCAATAGTGGGTACACGTGTTCGCATTACGTGT GGAAAAATTGGCACCGCCCCTCTCGCCTTCGCACAACACTTGTGGGTAAA CCTCATGCGCAAACCAGTAGGGTATGTATAGTATGGGTTTGGTTCGTTAT TGGACACACCCTCGCCGACAACGGCACTTTACACGTTGCGCACCTATTAC CCTGTTTGACCGCTTACATTATCACACCCTCTGCCCTGGTGGTAAATGCG AAACTACTGTAGAGAACGCTAGGATGGGCAGACTTCTTGGCGACTACGCA GTGGAATGAGGAAGATGAGGCCGCGTATGCCAGCGAGATGGGCGAGAACG GTCACAAGCTAGACTGGGGAGGCGAAGATGAGGAAATCGCTTCCGGTTAC GAAAGCGGTCTCGAATACGCGAGCGACCTCACGGAGGAGGGTGCCAGGGT CGCCGCACCCTTCGAGCCGGTAGTGCCGGTGACGGCATTGGACGTCGACC GTTACACCGGGCGATGGTACCAGGTGATACATCTGCGTCTTGCCGCCCTC CTTCCCACCTTTGCCGGGAAAACGTGAAACAGTATAATATCTGTTGCGAA TTGCGAAAATATTCCATGTCTGTCCCATGTTTTGTGTTGTTCGAACACCT ACTTCCTCGCTGAAGGAGAGTCATGCCCATGAAGTAACCTGTGGCCCCGC AGCGCTTGACACCCCGCGCCCGTAGCGCTTGACATTCACGAAGCATCGAG GATACAAAAATGCGCGAGATCAGCGATTTTCTTTGATGAGTCCTAAATTT TTACATTTCTCATTTTATTTTCGTCGCCTCTGTACTCTCGGCGTTTTTTT TCGTGTTTTTTCAGGCGTACTCGTCGTACACGGTGAGCACGCTGCTAGAA CAACACGGCGCGTGTGTAACAGCTGACTACGCCGCACAAGACGACGGTTC TATTTCTGTGGTAAACACTGCCAGGTGAGGGTTGCTTGCACGGGGGCAAT GCCTCGATTCTTCTCAGACTTAGCCTAATATCATTAAGACTTTTCTTTCA TGTTGCAGGGTCAAAATGGAAGATGTAGTTGGAAATTGTCTCTGGCAAGC AGGTGGTTGCGATGTAAGATCGTGTTTCGGCCTGCTGGCAATTCGTGTTT GTGGAAGGGGCAGGTTCCGCGTCGTGGTGATGGAACCCCCACCCACGAAT ATCGGGAAGAGCAAGGCGACGATGTCAGTCTCACATTGCGTATGCGATGC GATGAACTCGCGCCAAAGGCAGGCAATACGTCGCTCATCCAATAAATATC CATAGTGTGCACGGCTCCGACGACGGGTGGTGGGGCATGTTGAAGGGTCT TATGCTCCCCTCGTAGTCCTTTACCCGGAACGGCAGCCAGCAGCAGCGAC GAATTCACGTGCACCGATTCCTATTACTAGAAACAGTCGCAGTTCCGATG CTACATTGCATGGCAATGCGGCCTGGCTTCCTTGGTACGGAGGTGTTACC CTGATGTGCAACAATTTTGGCTTGCGCAACAGGGTGAAGACCACAGATGG AGAGGTGATCAAAATGGACGGTTACGCTTACGTGGAGGACGCCTCGCAAC CGGGCAAGCTAACGGTTCACCTTGACGGTGTGCCCGTTGATGCCCCATAC TGGATTCTGGCGCTCGGTGGCGAAGAAGAGGTGAGTCGGTGGATGTTTCG TCTTGGAAACCGCGAAAGCCGATGGTGGCACGATGCATAGCAGTAGGTAT AGAGTAGCCTCTTCGACTTCAAATCCATTTTTTTTAATCTCTCGAACACT ACAAACATGGACATTGCCAAAGCGCTGTTCGTTGCCGGTGTTGTTTAGCT AAACGCGTTGTTTTTTTGGCGATTCAAGCTTGGCGATACAACGCTGACGT TTGCCGAGCCCAAGGTTGTGGCGTCTGACCACATGTCGCGTTGTCGCGGC GCCTGAGCACTTGTGTGTCCCTCACTTTTTTCGCGTTACCCGTTCGCAGG ATGGCCCCTACTCGTGGTCGATTGTGTCCGACCCTATTAGGGCCTTCCTC TTTGTGCTCGTGCGCAACCCCGAAACGTTCTTCGGTTCCCAAGGCGAAGC CGACCTCCTCGCCAAGTGCAAGGACCTTGGCTTCACGGCTTTCTGGAACT CCCCTCGGAAGACGGAACAGGACGGGTGCGAGTACCCGGCGACCGCGACC GCTGCGATCGCGGAGGTTGGTGGAAAGCTTGGTGAGCTGTCGCCAGTCCT CAAACTTCGTGGCGGTGGATTGGGAGTGAAGGGGCCGCTGCACGCCAGCT GCAAGGTGAGCTTCGTTGGACAAATTGGGCTTCGGGTGGATGACCCTACG CAACGGAGTTCTGAGTCTTGACCGCATGTAGTTTTGTGCCCCTTGTAACA CCATGTGCTGGGTAGCCCCATACAGCATTGGCCTGGTGTTGAGTAGTTTT AACGTCTTGCTATCATGTTGCTACGGGGTGAAGCATGTCTGCTCCTCATT GCGAAAAAGGGCGCCGAAACCTTCGCGCGGAATCCCCAGATATGAATCAT AGTACAAGCACATATCGACGAAAGTCAACAAGTTAAGGCGACTACAAATC GACCACGCTATAACAGCATAGTTAGGAATCAGAGAGGGGCGCTGTTTCTG TGACCGACGGTGTGAGATGCATTAAAGTGAAGTACCTAGACCTGCAAAGG GCAACGAAACAAGCGCAGGTGGAACGTTCGGTAGCATGGCCGTAATTCTA GTTTTTTGTCGGCAGCAAGAGGCTCGAGGCGGTATTTTGCATCTCGTGAA GCAGTATCCACCCTTGCCTAATTAAATGACTCAACTTCGTGTCACTTTGC ATTGTTGTGGCGGTCGCCGCACACAGATGACTGTCAGCTTCTCTAAGCGC GGGTGCCAGGAAGTTAGCGATGCTCTTGTCACGGCTGCGAAGGGCATGAG CGACTTCGACAGCTGCAACGGCGGAAACAAGTGAGTTATATTTAGCGCAC ATACGAAAAAGTCCTGCAAAATATTACTGGCACCCGTCCTGTGTTTGGGA TCGAGGAGAAGACACGGTTTTCACAAGCAGGGCATGATGGCCTGGCTCGA GTATAGCGGGCTGTGAGAATGATGTACGTGATCTGTTTCTCATTTTGTGT CACCTCAAGATTCCCGGTAGATTACAGCGTTGGTCGAGGTTCAACGGGGC ATGTGCACACACGCCTTTTTAACCGGCCGGCGTTTTTTTTTCAGGTGCGG TTACACGGTGTCCAAGGTGTCCAACGGCAAAGCTGAATTCGTCCACGAGA CGTCGGTAAAACACTACAAGGACAGCCTGACCTTCACCTTCGCCGAAAAG GTATGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig910:20547..31202+

>mRNA_M-pyrifera_M_contig910.21101.1 ID=mRNA_M-pyrifera_M_contig910.21101.1|Name=mRNA_M-pyrifera_M_contig910.21101.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3294bp|location=Sequence derived from alignment at M-pyrifera_M_contig910:20547..31202+ (Macrocystis pyrifera P11B4 male)
ATGGCGAGATCTCTGCTCCAGTTCTTAGCTGTGGTGGCCCTGGGCGTCGC
TTGTCTGCACCCAGCCTCTGCGATCGAGACAGTTGATGAACTGATCGTCA
GCAAATACCTCGGACGTTGGTATCAGATGGCGAGATCTCTGCTCCAGTTC
TTAGCTGTGGTGGCCCTGGGCGTCGCTTGTCTGCACCCAGCCTCTGCGAT
CGAGACAGTTGATGAACTGATCGTCAGCAAATACCTCGGACGTTGGTATC
AGGCGTACGGGAATGCCTTCACGGCCCGGACGATTATCCGTGACAGCACG
TGTGTTGCTGCGGACTACGGCCTGGCGTACGGGAATGCCTTCACGGCCCG
GACGATTATCCGTGACAGCACGTGTGTTGCTGCGGACTACGGCCTGGATC
AAGCTACGGGTAACATTACCGTCATCAACTCCAGCCGTGTGCAGATACCC
ACCGGCGAGCTCAACACTATTTCGGGGATCAAGCTACGGGTAACATTACC
GTCATCAACTCCAGCCGTGTGCAGATACCCACCGGCGAGCTCAACACTAT
TTCGGGGTACGCATACGGCGTGGACGAGTGTGAGCCGGGGCAGCTGAAAG
TGCACCTTGGGCAGGTTCCGTTCGACGGCGACTATTGGGTTGTCGGTCTC
GGGCCTGCTACCTTTGGCTCTGATGGGGCGTACGAGTGGGCTATCGTCAG
TGGACCGTACGCATACGGCGTGGACGAGTGTGAGCCGGGGCAGCTGAAAG
TGCACCTTGGGCAGGTTCCGTTCGACGGCGACTATTGGGTTGTCGGTCTC
GGGCCTGCTACCTTTGGCTCTGATGGGGCGTACGAGTGGGCTATCGTCAG
TGGACCCGAGGCAGAGACCCTGTTCATCCTGGTGCGTGACGTGCCAAGCT
TTGAAGAAAAGTACGCGAAGGAAGTGTTGGCCTTCGTCCATGACTTGGGC
TTTACCGGCCCGGAGAAAGAGCCTCAGCGTATCATCCAGGAGGGCTGCTT
GCCCTTCGATCCCACCACCTTGGCGGCGAGAAAGCGAGGCAGAGACCCTG
TTCATCCTGGTGCGTGACGTGCCAAGCTTTGAAGAAAAGTACGCGAAGGA
AGTGTTGGCCTTCGTCCATGACTTGGGCTTTACCGGCCCGGAGAAAGAGC
CTCAGCGTATCATCCAGGAGGGCTGCTTGCCCTTCGATCCCACCACCTTG
GCGGCGAGAAAGAGAACGCTAGGATGGGCAGACTTCTTGGCGACTACGCA
GTGGAATGAGGAAGATGAGGCCGCGTATGCCAGCGAGATGGGCGAGAACG
GTCACAAGCTAGACTGGGGAGGCGAAGATGAGGAAATCGCTTCCGGTTAC
GAAAGCGGTCTCGAATACGCGAGCGACCTCACGGAGGAGGGTGCCAGGGT
CGCCGCACCCTTCGAGCCGGTAGTGCCGGTGACGGCATTGGACGTCGACC
GTTACACCGGGCGATGGTACCAGAGAACGCTAGGATGGGCAGACTTCTTG
GCGACTACGCAGTGGAATGAGGAAGATGAGGCCGCGTATGCCAGCGAGAT
GGGCGAGAACGGTCACAAGCTAGACTGGGGAGGCGAAGATGAGGAAATCG
CTTCCGGTTACGAAAGCGGTCTCGAATACGCGAGCGACCTCACGGAGGAG
GGTGCCAGGGTCGCCGCACCCTTCGAGCCGGTAGTGCCGGTGACGGCATT
GGACGTCGACCGTTACACCGGGCGATGGTACCAGGCGTACTCGTCGTACA
CGGTGAGCACGCTGCTAGAACAACACGGCGCGTGTGTAACAGCTGACTAC
GCCGCACAAGACGACGGTTCTATTTCTGTGGTAAACACTGCCAGGCGTAC
TCGTCGTACACGGTGAGCACGCTGCTAGAACAACACGGCGCGTGTGTAAC
AGCTGACTACGCCGCACAAGACGACGGTTCTATTTCTGTGGTAAACACTG
CCAGGGTGAAGACCACAGATGGAGAGGTGATCAAAATGGACGGTTACGCT
TACGTGGAGGACGCCTCGCAACCGGGCAAGCTAACGGTTCACCTTGACGG
TGTGCCCGTTGATGCCCCATACTGGATTCTGGCGCTCGGTGGCGAAGAAG
AGGGTGAAGACCACAGATGGAGAGGTGATCAAAATGGACGGTTACGCTTA
CGTGGAGGACGCCTCGCAACCGGGCAAGCTAACGGTTCACCTTGACGGTG
TGCCCGTTGATGCCCCATACTGGATTCTGGCGCTCGGTGGCGAAGAAGAG
GATGGCCCCTACTCGTGGTCGATTGTGTCCGACCCTATTAGGGCCTTCCT
CTTTGTGCTCGTGCGCAACCCCGAAACGTTCTTCGGTTCCCAAGGCGAAG
CCGACCTCCTCGCCAAGTGCAAGGACCTTGGCTTCACGGCTTTCTGGAAC
TCCCCTCGGAAGACGGAACAGGACGGGTGCGAGTACCCGGCGACCGCGAC
CGCTGCGATCGCGGAGGTTGGTGGAAAGCTTGGTGAGCTGTCGCCAGTCC
TCAAACTTCGTGGCGGTGGATTGGGAGTGAAGGGGCCGCTGCACGCCAGC
TGCAAGGATGGCCCCTACTCGTGGTCGATTGTGTCCGACCCTATTAGGGC
CTTCCTCTTTGTGCTCGTGCGCAACCCCGAAACGTTCTTCGGTTCCCAAG
GCGAAGCCGACCTCCTCGCCAAGTGCAAGGACCTTGGCTTCACGGCTTTC
TGGAACTCCCCTCGGAAGACGGAACAGGACGGGTGCGAGTACCCGGCGAC
CGCGACCGCTGCGATCGCGGAGGTTGGTGGAAAGCTTGGTGAGCTGTCGC
CAGTCCTCAAACTTCGTGGCGGTGGATTGGGAGTGAAGGGGCCGCTGCAC
GCCAGCTGCAAGATGACTGTCAGCTTCTCTAAGCGCGGGTGCCAGGAAGT
TAGCGATGCTCTTGTCACGGCTGCGAAGGGCATGAGCGACTTCGACAGCT
GCAACGGCGGAAACAAATGACTGTCAGCTTCTCTAAGCGCGGGTGCCAGG
AAGTTAGCGATGCTCTTGTCACGGCTGCGAAGGGCATGAGCGACTTCGAC
AGCTGCAACGGCGGAAACAAGTGCGGTTACACGGTGTCCAAGGTGTCCAA
CGGCAAAGCTGAATTCGTCCACGAGACGTCGGTAAAACACTACAAGGACA
GCCTGACCTTCACCTTCGCCGAAAAGGTATGAGTGCGGTTACACGGTGTC
CAAGGTGTCCAACGGCAAAGCTGAATTCGTCCACGAGACGTCGGTAAAAC
ACTACAAGGACAGCCTGACCTTCACCTTCGCCGAAAAGGTATGA
back to top