mRNA_M-pyrifera_M_contig910.21098.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig910.21098.1 vs. uniprot
Match: D8LC91_ECTSI (PRF3, plastid translation release factor RF3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC91_ECTSI) HSP 1 Score: 448 bits (1153), Expect = 9.930e-153 Identity = 211/228 (92.54%), Postives = 223/228 (97.81%), Query Frame = 2 Query: 2 DRLAYIRVVSGRYKKGMKVQHSRMKGKQVTLAHAQQLFAQERETVLEAYPGDVIGINNPGHFAIGDTIFTGGNKVRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMKSEYGVDTILEPLAGYNTARWAEGGWDTIDTATKAGKLFGIFAAQDKFGRPVLLFRNEWKLANVHGELPELELVPWSRPPDI 685 DRLAY+RVVSGRY+KGMKVQHSRMKGKQVTLAHAQQLFAQERETVL AYPGDVIGINNPGHFAIGDTIFTG NK+RFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMK+EYGVDTILEPL+GYNTARWAEGGW++ID ATKAGKLFG+F AQD+FGRPVLLFRNEWKLANV G+LP+LEL+PWSRPPDI Sbjct: 403 DRLAYVRVVSGRYEKGMKVQHSRMKGKQVTLAHAQQLFAQERETVLAAYPGDVIGINNPGHFAIGDTIFTGSNKIRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMKAEYGVDTILEPLSGYNTARWAEGGWESIDEATKAGKLFGVFTAQDRFGRPVLLFRNEWKLANVQGDLPQLELIPWSRPPDI 630
BLAST of mRNA_M-pyrifera_M_contig910.21098.1 vs. uniprot
Match: A0A836C6V6_9STRA (PRF3, plastid translation release factor RF3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6V6_9STRA) HSP 1 Score: 371 bits (953), Expect = 9.100e-123 Identity = 175/228 (76.75%), Postives = 198/228 (86.84%), Query Frame = 2 Query: 2 DRLAYIRVVSGRYKKGMKVQHSRMKGKQVTLAHAQQLFAQERETVLEAYPGDVIGINNPGHFAIGDTIFTGGNKVRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMKSEYGVDTILEPLAGYNTARWAEGGWDTIDTATKAGKLFGIFAAQDKFGRPVLLFRNEWKLANVHGELPELELVPWSRPPDI 685 DRLAYIRVVSGR++KGM+V HSRMKG+ V L AQQLFAQ+RE+V EA+PGDVIG+NNPG FAIGDTI+TG +V FPGIPSFSPECFAY+RNPNPS YKNY KGL QLLDEGAVQ+LRERSDDGNG+PILAAVGTLQFDVVQ+R+K EYGV+T LE L G+NTARW+ GWD +D A GKLFGIF A+D+FGRPVLLFRNEWKL V +LPELELVPW+ PPDI Sbjct: 387 DRLAYIRVVSGRFEKGMRVSHSRMKGRTVNLTQAQQLFAQDRESVSEAFPGDVIGLNNPGVFAIGDTIYTGARRVAFPGIPSFSPECFAYIRNPNPSTYKNYNKGLTQLLDEGAVQLLRERSDDGNGSPILAAVGTLQFDVVQYRLKDEYGVETRLEALPGFNTARWSNAGWDAVDAAEADGKLFGIFQAKDRFGRPVLLFRNEWKLQQVMADLPELELVPWAAPPDI 614
BLAST of mRNA_M-pyrifera_M_contig910.21098.1 vs. uniprot
Match: A0A6S9HEF4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HEF4_HETAK) HSP 1 Score: 336 bits (861), Expect = 3.880e-109 Identity = 157/229 (68.56%), Postives = 192/229 (83.84%), Query Frame = 2 Query: 2 DRLAYIRVVSGRYKKGMKVQHSRMKGKQVTLAHAQQLFAQERETVLEAYPGDVIGINNPGHFAIGDTIFTGGNKVRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMKSEYGVDTILEPLAGYNTARWAEGGWDTIDTATKAGKLFGIFAAQDKFGRPVLLFRNEWKLANVHGELPELELVPWSRPPDIE 688 DRLAY+RV SG+++KGMKV HSR K K V L+ AQ LFA +RETV AYPGD+IG+NNPG FAIGDTI+TG V++PGIPSFSPECF+Y+RNPNPSKYKNYRKGLDQL++EGAVQ+LR DDGNGNPILAAVGTLQFDVVQ+R++ EYGV+TILEP+ GY+ ARWAE W+ I T +GKLFG+F A+D++ RPVLLF+NEWKL +V + P+L+LVPW+ P+ E Sbjct: 371 DRLAYVRVCSGKFEKGMKVTHSRTK-KNVNLSAAQALFASDRETVETAYPGDIIGLNNPGVFAIGDTIYTGNQPVKYPGIPSFSPECFSYIRNPNPSKYKNYRKGLDQLMEEGAVQLLRAYGDDGNGNPILAAVGTLQFDVVQYRLQDEYGVETILEPVGGYSIARWAENSWEEIKEETASGKLFGVFLAKDQYERPVLLFKNEWKLNSVVQDCPDLKLVPWAMAPEYE 598
BLAST of mRNA_M-pyrifera_M_contig910.21098.1 vs. uniprot
Match: A0A7S1ZMF8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZMF8_9STRA) HSP 1 Score: 315 bits (808), Expect = 1.810e-102 Identity = 153/230 (66.52%), Postives = 185/230 (80.43%), Query Frame = 2 Query: 2 DRLAYIRVVSGRYKKGMKVQHSRMKG-KQVTLAHAQQLFAQERETVLEAYPGDVIGINNPGHFAIGDTIFTGGNKVRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMKSEYGVDTILEPLAGYNTARWAEGGWDTIDTATKAGKLFGIFAAQDKFGRPVLLFRNEWKLANVHGELPELELVPWSRPPDIE 688 DRLAY+R+VSG Y+KGMKV HSR K K+ LA AQ LF R+++ AYPGDVIGINNPG+FAIGDT+FTG KV FPGIPSFSPE FAY+RNPNPS YK+++KG+DQLL EGAVQ LR+R+DDG G ILAAVG LQF+VVQ R+++EYGV+++LEP+ GY ARWA+GGWD +D A K GKLFGI QD++ RPVLLFRN+WK A+V E LEL+PWSRPP + Sbjct: 263 DRLAYVRIVSGTYEKGMKVGHSRSKASKKYNLAQAQALFGNSRDSIEVAYPGDVIGINNPGNFAIGDTLFTGNAKVAFPGIPSFSPEKFAYIRNPNPSTYKSFQKGIDQLLAEGAVQALRQRNDDGGGPLILAAVGQLQFEVVQARLENEYGVESVLEPM-GYTMARWADGGWDAVDKADKDGKLFGIMIVQDRWKRPVLLFRNDWKAASVAAEEKYLELLPWSRPPSFD 491
BLAST of mRNA_M-pyrifera_M_contig910.21098.1 vs. uniprot
Match: A0A7S2LLQ4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LLQ4_9STRA) HSP 1 Score: 305 bits (781), Expect = 1.220e-101 Identity = 150/228 (65.79%), Postives = 181/228 (79.39%), Query Frame = 2 Query: 2 DRLAYIRVVSGRYKKGMKVQHSRMK-GKQVTLAHAQQLFAQERETVLEAYPGDVIGINNPGHFAIGDTIFTGGNKVRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMKSEYGVDTILEPLAGYNTARWAEGGWDTIDTATKAGKLFGIFAAQDKFGRPVLLFRNEWKLANVHGELPELELVPWSRPPD 682 DRLAY+R+VSG Y+KGMKV HSR K K+ LA AQ LF +R V AYPGDVIGINNPG+FAIGDT+FTG +K+ +PGIPSFSPE FAY+R PNPS YK ++KG+DQLL EGAVQ LR+R+DDG G ILAAVG LQF+VVQ R++SEYGV++ LEP+ GY+ ARWA+GGWD +D A GKLFGI QD++ RPVLLFRNEWK A+V E L+L PWS+PP+ Sbjct: 27 DRLAYVRIVSGVYEKGMKVGHSRSKPSKKYNLAQAQALFGSDRSAVEIAYPGDVIGINNPGNFAIGDTLFTGTSKISYPGIPSFSPEKFAYIRAPNPSSYKGFQKGIDQLLQEGAVQSLRQRNDDGGGPLILAAVGQLQFEVVQARLESEYGVESTLEPM-GYDLARWADGGWDAVDKADADGKLFGIMIVQDRWKRPVLLFRNEWKAASVAQEEDYLQLQPWSKPPE 253
BLAST of mRNA_M-pyrifera_M_contig910.21098.1 vs. uniprot
Match: A0A7S4QFI9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QFI9_9STRA) HSP 1 Score: 315 bits (808), Expect = 6.710e-101 Identity = 153/230 (66.52%), Postives = 185/230 (80.43%), Query Frame = 2 Query: 2 DRLAYIRVVSGRYKKGMKVQHSRMKG-KQVTLAHAQQLFAQERETVLEAYPGDVIGINNPGHFAIGDTIFTGGNKVRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMKSEYGVDTILEPLAGYNTARWAEGGWDTIDTATKAGKLFGIFAAQDKFGRPVLLFRNEWKLANVHGELPELELVPWSRPPDIE 688 DRLAY+R+VSG Y+KGMKV HSR K K+ LA AQ LF R+++ AYPGDVIGINNPG+FAIGDT+FTG KV FPGIPSFSPE FAY+RNPNPS YK+++KG+DQLL EGAVQ LR+R+DDG G ILAAVG LQF+VVQ R+++EYGV+++LEP+ GY ARWA+GGWD +D A K GKLFGI QD++ RPVLLFRN+WK A+V E LEL+PWSRPP + Sbjct: 394 DRLAYVRIVSGTYEKGMKVGHSRSKASKKYNLAQAQALFGNSRDSIEVAYPGDVIGINNPGNFAIGDTLFTGNAKVAFPGIPSFSPEKFAYIRNPNPSTYKSFQKGIDQLLAEGAVQALRQRNDDGGGPLILAAVGQLQFEVVQARLENEYGVESVLEPM-GYTMARWADGGWDAVDKADKDGKLFGIMIVQDRWKRPVLLFRNDWKAASVAAEEKYLELLPWSRPPSFD 622
BLAST of mRNA_M-pyrifera_M_contig910.21098.1 vs. uniprot
Match: A0A7S2SJV3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJV3_9STRA) HSP 1 Score: 305 bits (780), Expect = 7.130e-101 Identity = 149/230 (64.78%), Postives = 183/230 (79.57%), Query Frame = 2 Query: 2 DRLAYIRVVSGRYKKGMKVQHSRMKG-KQVTLAHAQQLFAQERETVLEAYPGDVIGINNPGHFAIGDTIFTGGNKVRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMKSEYGVDTILEPLAGYNTARWAEGGWDTIDTATKAGKLFGIFAAQDKFGRPVLLFRNEWKLANVHGELPELELVPWSRPPDIE 688 DRLA++R+VSG Y+KGMKV HSR KG K+ LA AQ LF R++V AYPGD+IGINNPG+FAIGDT++TG KV FPGIPSFSPE FAY+RNPNPS YK+++KG+DQLL EGAVQ LR+R+DDG G ILAAVG LQF+VVQ R+K+EYGV++ LE + G+ ARWA+GGWD +D A K GKLFGI QD++ RPVLLFRN+WK A++ E LEL PWS+PP + Sbjct: 69 DRLAFVRIVSGTYQKGMKVGHSRSKGAKKYNLAQAQALFGSSRDSVEIAYPGDIIGINNPGNFAIGDTLYTGNVKVAFPGIPSFSPEKFAYIRNPNPSTYKSFQKGIDQLLAEGAVQSLRQRNDDGGGPLILAAVGQLQFEVVQARLKTEYGVESQLETI-GFTLARWADGGWDAVDKADKDGKLFGIMIVQDRWQRPVLLFRNDWKAASLGEEEKYLELKPWSKPPSFD 297
BLAST of mRNA_M-pyrifera_M_contig910.21098.1 vs. uniprot
Match: A0A7S2L692_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L692_9STRA) HSP 1 Score: 313 bits (802), Expect = 5.040e-100 Identity = 156/230 (67.83%), Postives = 179/230 (77.83%), Query Frame = 2 Query: 2 DRLAYIRVVSGRYKKGMKVQHSRMK-GKQVTLAHAQQLFAQERETVLEAYPGDVIGINNPGHFAIGDTIFTGGNKVRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMKSEYGVDTILEPLAGYNTARWAEGGWDTIDTATKAGKLFGIFAAQDKFGRPVLLFRNEWKLANVHGELPELELVPWSRPPDIE 688 DRLAYIR+VSG ++KGMKV HSR K GK+ LA AQ LF +RE+V AYPGDVIGINNPG FAIGDT++TG KV FPGIPSFSPE FAY+RNPNPS YK++ KG+DQLL EGAVQ LR+R+DDG G ILAAVG LQF+VVQ R+K EY VD+ LEP+ GY ARWAEGGWD +D A GKLFGI QD++GRPVLLFRN+WK V E LEL PWS+PP E Sbjct: 393 DRLAYIRIVSGAFQKGMKVGHSRSKPGKKFNLAQAQTLFGSDRESVEVAYPGDVIGINNPGDFAIGDTLYTGNQKVAFPGIPSFSPEIFAYIRNPNPSSYKSFTKGIDQLLAEGAVQALRQRNDDGGGPLILAAVGQLQFEVVQARLKGEYNVDSDLEPI-GYTLARWAEGGWDAVDKADADGKLFGIMIVQDRWGRPVLLFRNDWKATGVAEEEKYLELKPWSKPPMFE 621
BLAST of mRNA_M-pyrifera_M_contig910.21098.1 vs. uniprot
Match: A0A7S2UGB4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGB4_9STRA) HSP 1 Score: 312 bits (800), Expect = 9.530e-100 Identity = 149/230 (64.78%), Postives = 185/230 (80.43%), Query Frame = 2 Query: 2 DRLAYIRVVSGRYKKGMKVQHSRMKG-KQVTLAHAQQLFAQERETVLEAYPGDVIGINNPGHFAIGDTIFTGGNKVRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMKSEYGVDTILEPLAGYNTARWAEGGWDTIDTATKAGKLFGIFAAQDKFGRPVLLFRNEWKLANVHGELPELELVPWSRPPDIE 688 DRLAY+R+VSG Y+KGMKV HSR KG K+ LA AQ LF +R V AYPGDVIGINNPG+FAIGDT+FTG +K+ +PGIPSFSPE F+Y+RNPNPS YK ++KG+DQLLDEGA+Q LR+R+DDG G +LAAVG LQF+VVQ R++SEYGV++I+EP+ GYN ARW +GGWD ++ A GKLFGI QD++ RPVLLFRN+WK A++ E LEL+PWSRPP + Sbjct: 390 DRLAYVRIVSGTYEKGMKVGHSRSKGGKKYNLAQAQALFGNDRSAVEIAYPGDVIGINNPGNFAIGDTLFTGTSKIAYPGIPSFSPEKFSYIRNPNPSSYKAFQKGMDQLLDEGAIQALRQRNDDGGGPLLLAAVGQLQFEVVQARLESEYGVESIMEPI-GYNLARWVDGGWDAVEKADADGKLFGIMVVQDRWKRPVLLFRNDWKAASLAEEEKYLELLPWSRPPSFD 618
BLAST of mRNA_M-pyrifera_M_contig910.21098.1 vs. uniprot
Match: A0A7S2V815_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V815_9STRA) HSP 1 Score: 305 bits (782), Expect = 9.800e-100 Identity = 140/205 (68.29%), Postives = 174/205 (84.88%), Query Frame = 2 Query: 2 DRLAYIRVVSGRYKKGMKVQHSRMKGKQVTLAHAQQLFAQERETVLEAYPGDVIGINNPGHFAIGDTIFTGGNKVRFPGIPSFSPECFAYMRNPNPSKYKNYRKGLDQLLDEGAVQMLRERSDDGNGNPILAAVGTLQFDVVQHRMKSEYGVDTILEPLAGYNTARWAEGGWDTIDTATKAGKLFGIFAAQDKFGRPVLLFRNEW 616 DRLAY+RV SG+++KGMKV HSR K +TL+ AQ LFA +R+TV EAYPGDVIG+NNPG FAIGDT++TG K+++PGIPSFSPECFAY+R+ +P+KYKN+RKG+DQLL+EGAVQ+LR + DDGNGNPILAAVG LQFDVVQHR+K EYGV+TI EPLAG++ ARW EG W+ ++ GKLFG+F +QD++ RPVLLFRN W Sbjct: 198 DRLAYVRVCSGKFQKGMKVSHSRSSRK-LTLSQAQTLFASDRDTVEEAYPGDVIGLNNPGMFAIGDTLYTGNTKIKYPGIPSFSPECFAYIRSTDPTKYKNFRKGIDQLLEEGAVQLLRAKDDDGNGNPILAAVGALQFDVVQHRLKDEYGVETITEPLAGFSIARWVEGTWEDVNAVHAEGKLFGVFQSQDRWNRPVLLFRNNW 401 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig910.21098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig910.21098.1 >prot_M-pyrifera_M_contig910.21098.1 ID=prot_M-pyrifera_M_contig910.21098.1|Name=mRNA_M-pyrifera_M_contig910.21098.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=214bp MKVQHSRMKGKQVTLAHAQQLFAQERETVLEAYPGDVIGINNPGHFAIGDback to top mRNA from alignment at M-pyrifera_M_contig910:6041..7935+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig910.21098.1 ID=mRNA_M-pyrifera_M_contig910.21098.1|Name=mRNA_M-pyrifera_M_contig910.21098.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1895bp|location=Sequence derived from alignment at M-pyrifera_M_contig910:6041..7935+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig910:6041..7935+ >mRNA_M-pyrifera_M_contig910.21098.1 ID=mRNA_M-pyrifera_M_contig910.21098.1|Name=mRNA_M-pyrifera_M_contig910.21098.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1284bp|location=Sequence derived from alignment at M-pyrifera_M_contig910:6041..7935+ (Macrocystis pyrifera P11B4 male)back to top |