mRNA_M-pyrifera_M_contig910.21097.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig910.21097.1 vs. uniprot
Match: A0A6H5KH59_9PHAE (Tr-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH59_9PHAE) HSP 1 Score: 176 bits (445), Expect = 3.150e-51 Identity = 83/101 (82.18%), Postives = 93/101 (92.08%), Query Frame = 1 Query: 1 PIFTFVNKMDRPSLGPFELLDQIEREFGMRMAPVLWPIGDGDQFQGVLERDTNTVHLFERASRTAKATDVAALKLHDPLLPTLITEEFYEQLLEDVEMLDE 303 PIFTFVNK+DRPSL PFELLDQIEREFGM+MAPVLWPIGDG++F+GVL+RDTNTVHLFERA+RT KATD+ + LHDP LP LITEE +EQLLEDVEMLDE Sbjct: 181 PIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEEFKGVLDRDTNTVHLFERAARTKKATDMPEIDLHDPKLPELITEELHEQLLEDVEMLDE 281
BLAST of mRNA_M-pyrifera_M_contig910.21097.1 vs. uniprot
Match: D8LC91_ECTSI (PRF3, plastid translation release factor RF3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC91_ECTSI) HSP 1 Score: 174 bits (440), Expect = 3.410e-49 Identity = 83/101 (82.18%), Postives = 91/101 (90.10%), Query Frame = 1 Query: 1 PIFTFVNKMDRPSLGPFELLDQIEREFGMRMAPVLWPIGDGDQFQGVLERDTNTVHLFERASRTAKATDVAALKLHDPLLPTLITEEFYEQLLEDVEMLDE 303 PIFTFVNK+DRPSL PFELLDQIEREFGM+MAPVLWPIGDG++F+GVL+RDT TVHLFERA RT KATD+ L LHDP LP LITEE +EQLLEDVEMLDE Sbjct: 225 PIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEEFKGVLDRDTKTVHLFERAGRTKKATDMPELDLHDPKLPELITEELHEQLLEDVEMLDE 325
BLAST of mRNA_M-pyrifera_M_contig910.21097.1 vs. uniprot
Match: A0A836C6V6_9STRA (PRF3, plastid translation release factor RF3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6V6_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.350e-37 Identity = 67/100 (67.00%), Postives = 78/100 (78.00%), Query Frame = 1 Query: 1 PIFTFVNKMDRPSLGPFELLDQIEREFGMRMAPVLWPIGDGDQFQGVLERDTNTVHLFERASRTAKATDVAALKLHDPLLPTLITEEFYEQLLEDVEMLD 300 PIFTF NK+DRPSL PFELLDQIE +FG++M PVLWPIGDG FQGVL+RDTN VHLFER RT +A ++ L+L DP LP I E Y QL EDVE+L+ Sbjct: 205 PIFTFCNKLDRPSLSPFELLDQIEGDFGLQMVPVLWPIGDGPNFQGVLDRDTNLVHLFERGDRTGRAKEMGTLELDDPELPIAIGETLYNQLREDVEVLE 304
BLAST of mRNA_M-pyrifera_M_contig910.21097.1 vs. uniprot
Match: A0A7S2V815_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V815_9STRA) HSP 1 Score: 130 bits (326), Expect = 4.570e-34 Identity = 60/102 (58.82%), Postives = 78/102 (76.47%), Query Frame = 1 Query: 1 PIFTFVNKMDRPSLGPFELLDQIEREFGMRMAPVLWPIGDGDQFQGVLERDTNTVHLFERASRTAKATDVAA--LKLHDPLLPTLITEEFYEQLLEDVEMLD 300 PIFTF NKMDRP+L PFEL+DQIE EFG+ + P+LWPIGDG +F+GVL+R+TN VHL+E+ R KA + A + L DP+L L+ EE Y QL+ED E+L+ Sbjct: 18 PIFTFCNKMDRPALSPFELMDQIEAEFGLELHPILWPIGDGPRFKGVLDRETNLVHLYEKGERGKKAVEEAQGPIPLDDPILKELLEEELYNQLMEDAEILE 119
BLAST of mRNA_M-pyrifera_M_contig910.21097.1 vs. uniprot
Match: A0A7S0HQF6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HQF6_9EUKA) HSP 1 Score: 132 bits (331), Expect = 7.580e-34 Identity = 64/102 (62.75%), Postives = 80/102 (78.43%), Query Frame = 1 Query: 1 PIFTFVNKMDRPSLGPFELLDQIEREFGMRMAPVLWPIGDGDQFQGVLERDTNTVHLFERASRTAKATDVAALKLHDPLLPTLITE-EFYEQLLEDVEMLDE 303 P+FTFVNKMDRP+L PFE++DQIE EFG+ +PVLWPIG GD+F+GVL+R N VHLFERA+R A AT++ + L DP L LI + E YE L+E+VEML E Sbjct: 173 PLFTFVNKMDRPALSPFEIIDQIENEFGLVCSPVLWPIGSGDRFKGVLDRTNNQVHLFERAARGAMATELTTVMLDDPELAELIGDAELYEALIEEVEMLKE 274
BLAST of mRNA_M-pyrifera_M_contig910.21097.1 vs. uniprot
Match: A0A7S2WHP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHP1_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.560e-33 Identity = 63/100 (63.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 1 PIFTFVNKMDRPSLGPFELLDQIEREFGMRMAPVLWPIGDGDQFQGVLERDTNTVHLFERASRTAKATDVAALKLHDPLLPTLITEEFYEQLLEDVEMLD 300 PIFTF NKMDRP+L P EL+DQIE EFG+ PV+WPIGDG +FQGVL+R V+LFER RT KA D A + L DP L LI E Y QL+EDVE+LD Sbjct: 214 PIFTFCNKMDRPALSPLELIDQIEGEFGLNCHPVVWPIGDGPEFQGVLDRQEGLVYLFERGDRTGKAKDKATVSLDDPDLEELIGERLYSQLMEDVEVLD 313
BLAST of mRNA_M-pyrifera_M_contig910.21097.1 vs. uniprot
Match: A0A7S4C4F1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C4F1_CHRCT) HSP 1 Score: 124 bits (311), Expect = 5.080e-31 Identity = 57/102 (55.88%), Postives = 80/102 (78.43%), Query Frame = 1 Query: 1 PIFTFVNKMDRPSLGPFELLDQIEREFGMRMAPVLWPIGDGDQFQGVLERDTNTVHLFERASRTAKATDVAALKLHDPLLPTLI-TEEFYEQLLEDVEMLDE 303 P+FTFVNK+DRPSL PFE+ D+IEREFG+ +PV+WPIG GD+F+GV +R T VH+F+R R +KA ++A++ + DP L LI +E Y QL++DVE++DE Sbjct: 201 PLFTFVNKLDRPSLSPFEICDEIEREFGVACSPVMWPIGSGDRFKGVHDRRTGLVHVFQRGERGSKAEELASVPIDDPGLQALIGDDELYAQLIDDVEVVDE 302
BLAST of mRNA_M-pyrifera_M_contig910.21097.1 vs. uniprot
Match: A0A7S2FZH2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZH2_9STRA) HSP 1 Score: 123 bits (309), Expect = 9.020e-31 Identity = 59/101 (58.42%), Postives = 75/101 (74.26%), Query Frame = 1 Query: 1 PIFTFVNKMDRPSLGPFELLDQIEREFGMRMAPVLWPIGDGDQFQGVLERDTNTVHLFERASRTAKATDVAALKLHDP-LLPTLITEEFYEQLLEDVEMLD 300 P+FTF NKMDRP+L PFEL+DQIE +F + PV+WPIG G++F+G+LER+T TVHLFE+ RT KA D+A + L D L L+ + Y QLLED EMLD Sbjct: 190 PVFTFCNKMDRPALSPFELIDQIEADFKLTCVPVVWPIGMGEEFRGLLERETKTVHLFEKGIRTGKAVDMATVPLDDAETLEDLLGADVYAQLLEDAEMLD 290
BLAST of mRNA_M-pyrifera_M_contig910.21097.1 vs. uniprot
Match: R1CIP5_EMIHU (Putative mitochondrial elongation factor n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CIP5_EMIHU) HSP 1 Score: 123 bits (308), Expect = 1.030e-30 Identity = 59/101 (58.42%), Postives = 73/101 (72.28%), Query Frame = 1 Query: 1 PIFTFVNKMDRPSLGPFELLDQIEREFGMRMAPVLWPIGDGDQFQGVLERDTNTVHLFERASRTAKATDVAALKLHDPLLPTLITE-EFYEQLLEDVEMLD 300 P+FTFVNK+DRPSL P+EL+DQIE EFG+ P+LWP+G GD+F+GVLER VHLF R R KA + A + L D L LI + E Y QL++DVEMLD Sbjct: 135 PLFTFVNKLDRPSLSPYELIDQIEAEFGISCCPLLWPVGSGDRFRGVLERGARRVHLFARGERGKKAEEAAVVSLDDDRLEALIGDGELYAQLIDDVEMLD 235
BLAST of mRNA_M-pyrifera_M_contig910.21097.1 vs. uniprot
Match: W7TN94_9STRA (Peptide chain release factor 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN94_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.520e-30 Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 1 PIFTFVNKMDRPSLGPFELLDQIEREFGMRMAPVLWPIGDGDQFQGVLERDTNTVHLFERASRTAKATDVAALKLHDPLLPTLITEEFYEQLLEDVEMLD 300 PI+TFVNKMDRP+ GP EL+D+IERE G+ + P++WPIGDG+ F+GV +R+ VHLFER R KA + AL L DP LP L+ + QL EDVE+LD Sbjct: 280 PIYTFVNKMDRPAKGPVELVDEIEREMGLEVVPMVWPIGDGEDFKGVYDREARVVHLFERQGRKEKAAALDALPLSDPGLPKLLGSTLFAQLEEDVELLD 379 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig910.21097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig910.21097.1 >prot_M-pyrifera_M_contig910.21097.1 ID=prot_M-pyrifera_M_contig910.21097.1|Name=mRNA_M-pyrifera_M_contig910.21097.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp MDRPSLGPFELLDQIEREFGMRMAPVLWPIGDGDQFQGVLERDTNTVHLFback to top mRNA from alignment at M-pyrifera_M_contig910:4689..5317+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig910.21097.1 ID=mRNA_M-pyrifera_M_contig910.21097.1|Name=mRNA_M-pyrifera_M_contig910.21097.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=629bp|location=Sequence derived from alignment at M-pyrifera_M_contig910:4689..5317+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig910:4689..5317+ >mRNA_M-pyrifera_M_contig910.21097.1 ID=mRNA_M-pyrifera_M_contig910.21097.1|Name=mRNA_M-pyrifera_M_contig910.21097.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig910:4689..5317+ (Macrocystis pyrifera P11B4 male)back to top |