mRNA_M-pyrifera_M_contig90990.21096.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A2E8L967_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L967_9ACTN) HSP 1 Score: 412 bits (1060), Expect = 1.540e-141 Identity = 212/264 (80.30%), Postives = 230/264 (87.12%), Query Frame = 1 Query: 1 ATGCRVAWDETGGDPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEE---LHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLAT 783 ATGC V D T L I+VPA IEPVAPYE+VEQFRASIVV+GPMLARC EARVA+PGGDDFGPRPIDMHVRGL ELGAEF+T HGYIHA + NL GARVLLEFPSVGATENL+MAAVRAKGTTVIDNAAREPEIADLCELLNKMGA+I G+GSS + I+G E LHSADHTVIPDRIEAATYL A+GITGGE+TVAGARH HM+MLCQKLGEMGMRIS D DGIWA A RR+ S+DC +LPYPG+ATDFKPFLV LLAT Sbjct: 62 ATGCSVTRDGT----TLRIDVPAEIEPVAPYEIVEQFRASIVVMGPMLARCREARVAMPGGDDFGPRPIDMHVRGLQELGAEFDTAHGYIHARSQNLQGARVLLEFPSVGATENLVMAAVRAKGTTVIDNAAREPEIADLCELLNKMGAQIIGAGSSAITIDGVESQNALHSADHTVIPDRIEAATYLCAVGITGGEITVAGARHEHMSMLCQKLGEMGMRISHDPDGIWALAPRRMTSADCQSLPYPGIATDFKPFLVTLLAT 321
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A3M2FST7_ACTSX (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2FST7_ACTSX) HSP 1 Score: 390 bits (1001), Expect = 1.080e-131 Identity = 195/263 (74.14%), Postives = 222/263 (84.41%), Query Frame = 1 Query: 7 GCRVAWDETGG----DPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLAT 783 G RV W + D VL I++PA I PVAPYELVE+FRASIVVLGP+LARCGEARVALPGGDDFGPRPIDMH+RGLA LGAEF+T HGY+ APNL+G+RVLLEFPSVGATEN++MAAVRAKGTT IDNAAREPEIADLC +LNKMGARI G+GSST+VIEG +EL H V+PDRIEAATYLAA+G+ GGE+ VA AR HM +LCQKLGEMGMRIS D DG+WA A RRLR+ DCSTLPYPG+ATD+KP +V LL+T Sbjct: 122 GARVRWRDPDASLDDDRVLEIDMPATITPVAPYELVERFRASIVVLGPLLARCGEARVALPGGDDFGPRPIDMHLRGLAALGAEFDTSHGYVEGRAPNLVGSRVLLEFPSVGATENIVMAAVRAKGTTTIDNAAREPEIADLCGMLNKMGARIEGAGSSTIVIEGVDELGPVRHRVVPDRIEAATYLAAVGMAGGEIVVADARLDHMDLLCQKLGEMGMRISADPDGLWAMANRRLRAVDCSTLPYPGIATDYKPLIVTLLST 384
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A7Y2DBZ5_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DBZ5_9ACTN) HSP 1 Score: 367 bits (941), Expect = 1.800e-123 Identity = 183/257 (71.21%), Postives = 213/257 (82.88%), Query Frame = 1 Query: 7 GCRVAWDETGGDPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALL 777 GC VA+ D VL I+VPA I PVAPYELVEQFRASIVVLGP+L RC EA+VA+PGGDDFGPRPIDMHVRGL LG F++ HGYI A NL+G VLLEFPSVGATEN+LMAAVRAKGTTVI+NAAREPEI DL L +MGA+++G+G+ T+ +EG + + + DHT IPDRIE ATYLAA+GI GGELT+ GAR H+ ML QKLG+MGMRISPDADG+WA+AGRRL S+D STLPYPGLATD+KPFLVA+L Sbjct: 65 GCTVAYH----DSVLTIDVPAEITPVAPYELVEQFRASIVVLGPLLGRCREAQVAMPGGDDFGPRPIDMHVRGLETLGVTFDSAHGYIRGHADNLVGNEVLLEFPSVGATENILMAAVRAKGTTVIENAAREPEICDLAAFLGRMGAKVSGAGTPTITVEGVDHMTAVDHTTIPDRIEVATYLAAVGIAGGELTLQGARADHIDMLAQKLGDMGMRISPDADGLWAFAGRRLTSADISTLPYPGLATDYKPFLVAML 317
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A6B1EE32_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EE32_9ACTN) HSP 1 Score: 365 bits (938), Expect = 4.980e-123 Identity = 189/264 (71.59%), Postives = 215/264 (81.44%), Query Frame = 1 Query: 1 ATGCRVAWDETGGDPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEG---AEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLAT 783 A GC V WD +L I+VPA I PVAPY++VE+FRAS+VVLGPMLARCGEA+VALPGGDDFGPRPIDMHV+GL ELGA + HGY+ A+A LLG RV+LEFPSVGATENLLMAAV AKG TVIDNAAREPEI+DLCE L++MGARI G GSSTL +EG A LH ADH+V+PDRI AAT+LAALG+ GE+ VAGARH HM +LCQKL EMGM I+PD GI A A RRL S DCSTLPYPG+ATD+ PFLVA+LAT Sbjct: 59 AVGCTVEWDPVQPS-LLHIDVPAEISPVAPYDIVERFRASVVVLGPMLARCGEAKVALPGGDDFGPRPIDMHVQGLVELGAAVDVVHGYVEASAVELLGGRVVLEFPSVGATENLLMAAVAAKGATVIDNAAREPEISDLCEFLSRMGARIEGVGSSTLTVEGSGSASPLHPADHSVVPDRIVAATHLAALGVASGEVFVAGARHDHMELLCQKLTEMGMVITPDDGGIRAIAPRRLDSVDCSTLPYPGIATDYLPFLVAMLAT 321
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A6B0WPD9_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WPD9_9ACTN) HSP 1 Score: 362 bits (929), Expect = 1.150e-121 Identity = 188/264 (71.21%), Postives = 216/264 (81.82%), Query Frame = 1 Query: 1 ATGCRVAWDETGGDPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGA---EELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLAT 783 A GC V WD T D + I+VPA I PVAPY++VE+FRAS+VVLGPMLAR GEARVALPGGDDFGPRPIDMHVRGL ELGA+ + HGYI A+A LLG RV+LEFPSVGATENLLMAAV AKGTTVIDNAAREPEI+DLC+ L +MGARI G+GSSTL +EGA + L +ADH+V+PDRI AATYLAALG+ G++ VAGAR+ HM +L QKL EMGM I+PD DGI A A RRL S DCSTLPYPG+ATD PFLV ++AT Sbjct: 59 AVGCAVQWDPTD-DAAIRIDVPAEITPVAPYDIVERFRASVVVLGPMLARSGEARVALPGGDDFGPRPIDMHVRGLVELGAQVDVVHGYIEASAAELLGGRVVLEFPSVGATENLLMAAVAAKGTTVIDNAAREPEISDLCQFLGRMGARIEGAGSSTLEVEGAGTAQFLRAADHSVVPDRIVAATYLAALGVASGDVFVAGARYDHMELLSQKLTEMGMLITPDTDGIRAIAPRRLDSVDCSTLPYPGVATDHLPFLVVMMAT 321
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: UPI001F42F8CF (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F42F8CF) HSP 1 Score: 352 bits (903), Expect = 5.980e-118 Identity = 176/235 (74.89%), Postives = 200/235 (85.11%), Query Frame = 1 Query: 79 PVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLAT 783 P APYELVE+ RASIVVLGP+LAR G ARVALPGGDDFGPRPIDMH+RGL ELGA FE HGYI A A L+GARVLLEFPSVGATEN+L+AAV AKGTTVIDNAAREPEIADL LN+MGAR+ G+GSST+ ++G E+L +HTVIPDR+EAAT+LAALG+ GGEL +AGARH HM M KLGEMGMRISPD++GIWA + RRLR+ D STLPYPGLATD+KP VA+LAT Sbjct: 71 PEAPYELVERMRASIVVLGPLLARYGRARVALPGGDDFGPRPIDMHLRGLEELGASFEFAHGYIEARADQLIGARVLLEFPSVGATENVLLAAVLAKGTTVIDNAAREPEIADLASFLNRMGARVLGAGSSTIQVDGVEQLAPVEHTVIPDRVEAATFLAALGVAGGELLLAGARHDHMDMYVAKLGEMGMRISPDSEGIWAMSARRLRAVDVSTLPYPGLATDYKPLFVAMLAT 305
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A538J9L8_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538J9L8_9ACTN) HSP 1 Score: 343 bits (879), Expect = 3.930e-114 Identity = 170/244 (69.67%), Postives = 199/244 (81.56%), Query Frame = 1 Query: 49 LVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLA 780 L I V I P APYELVEQ RASIVVLGP+L RCG+ARVALPGGDDFGPRPIDMH RGL LG EF + HGY+ A L G+R++LEFPSVGATEN+LMAAVRAKGTT+IDNAAREPEIADL LN+MGA++ G+GSST+ +EG E LH +HTV+PDRIEA T+LAA+G GGE+T+ GAR HM M+ QKLG+MGMRISP ++G+WA RRLRS D +TLPYPG+ATD+KPF VALLA Sbjct: 72 LRIRVGPDIVPEAPYELVEQMRASIVVLGPLLTRCGQARVALPGGDDFGPRPIDMHQRGLEALGVEFTSAHGYVEARCDQLTGSRIVLEFPSVGATENILMAAVRAKGTTLIDNAAREPEIADLAAFLNRMGAQVLGAGSSTIEVEGVEGLHPVEHTVVPDRIEAGTFLAAVGAAGGEITIEGARPDHMDMVVQKLGDMGMRISPASEGVWAQRTRRLRSVDVATLPYPGIATDYKPFFVALLA 315
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A538B6X4_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538B6X4_9ACTN) HSP 1 Score: 342 bits (878), Expect = 5.230e-114 Identity = 175/247 (70.85%), Postives = 200/247 (80.97%), Query Frame = 1 Query: 40 DPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLA 780 D VL I+V I P APYELVE+ RASIVVLGP+LAR G ARVALPGGD+FGPRPIDMH+ GL LG F++ HGYI A L+G RV+LEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLC L +MGARI G G+ST+ IEG +EL DHTVIPDRIEA T+LAA+G+ GGE+ + GAR HM ML +KLGEMGMR+SP +DGIWA A RLR+ D STLPYPG+ATD+KPF VA+LA Sbjct: 69 DHVLTIDVGTDITPEAPYELVERMRASIVVLGPLLARNGYARVALPGGDNFGPRPIDMHISGLEALGVRFDSAHGYIEARCDALIGNRVVLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCAFLVRMGARIVGGGTSTIEIEGVDELSPVDHTVIPDRIEAGTFLAAVGVAGGEIALEGARPDHMDMLIRKLGEMGMRVSPSSDGIWAQAKGRLRAVDVSTLPYPGIATDYKPFFVAMLA 315
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: UPI001E48A0A5 (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E48A0A5) HSP 1 Score: 341 bits (874), Expect = 2.110e-113 Identity = 175/249 (70.28%), Postives = 203/249 (81.53%), Query Frame = 1 Query: 37 GDPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLAT 783 GD LVIE + P APYELVE+ RASIVV+GP++AR G ARVALPGGDDFGPRPIDMH+R L +LGA FET HGYI A A L+G R+LLEFPSVGATEN LMAAV AKGTTVIDNAAREPEIADL L +MGA+I G+GSST+ +EG +EL + +H V+PDRIEAAT+LAA+GI GGE+T+ GAR HM ML KLGEMGMRISP ADG+WA A RL ++D STLPYPG+ATD+KP LVA+LAT Sbjct: 68 GDHGLVIEHHDGLVPEAPYELVERMRASIVVMGPLVARYGRARVALPGGDDFGPRPIDMHLRALEQLGATFETAHGYIEARAERLVGTRILLEFPSVGATENALMAAVLAKGTTVIDNAAREPEIADLASFLTRMGAQILGAGSSTIEVEGVDELSAVEHRVVPDRIEAATFLAAVGIAGGEITLTGARADHMDMLIAKLGEMGMRISPTADGLWAMAPGRLLATDVSTLPYPGVATDYKPLLVAMLAT 316
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A538HE95_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538HE95_9ACTN) HSP 1 Score: 339 bits (870), Expect = 9.060e-113 Identity = 167/244 (68.44%), Postives = 199/244 (81.56%), Query Frame = 1 Query: 49 LVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLA 780 L ++VP + P APYELVE+ RASI+VLGP+LA CG ARVALPGGDDFGPRPIDMH+RGL LGA FE HGYI A L G R+LLEFPSVGATEN+LMAAVRAKG TVIDNAAREPEIADL L++MGAR+ G+G+ST+ +EG EEL S DHT++PDR+EAAT+LAA+G+ GE+ + GAR HM ML QKLGEMGMRISP + G+WAY+ RLR+ D +TLPYPG+ATD+KP VALL+ Sbjct: 72 LTLDVPEELTPEAPYELVERMRASIIVLGPLLASCGVARVALPGGDDFGPRPIDMHLRGLEALGASFEAAHGYIEGRAEQLTGTRILLEFPSVGATENILMAAVRAKGVTVIDNAAREPEIADLAAFLDRMGARVTGAGTSTIHVEGVEELASVDHTLVPDRVEAATFLAAVGLARGEIFIEGARADHMDMLVQKLGEMGMRISPASGGLWAYSRGRLRAVDVATLPYPGIATDYKPLFVALLS 315 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90990.21096.1 >prot_M-pyrifera_M_contig90990.21096.1 ID=prot_M-pyrifera_M_contig90990.21096.1|Name=mRNA_M-pyrifera_M_contig90990.21096.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=261bp ATGCRVAWDETGGDPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARback to top mRNA from alignment at M-pyrifera_M_contig90990:2..784+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90990.21096.1 ID=mRNA_M-pyrifera_M_contig90990.21096.1|Name=mRNA_M-pyrifera_M_contig90990.21096.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig90990:2..784+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90990:2..784+ >mRNA_M-pyrifera_M_contig90990.21096.1 ID=mRNA_M-pyrifera_M_contig90990.21096.1|Name=mRNA_M-pyrifera_M_contig90990.21096.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1566bp|location=Sequence derived from alignment at M-pyrifera_M_contig90990:2..784+ (Macrocystis pyrifera P11B4 male)back to top |