mRNA_M-pyrifera_M_contig90990.21096.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90990.21096.1
Unique NamemRNA_M-pyrifera_M_contig90990.21096.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A2E8L967_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L967_9ACTN)

HSP 1 Score: 412 bits (1060), Expect = 1.540e-141
Identity = 212/264 (80.30%), Postives = 230/264 (87.12%), Query Frame = 1
Query:    1 ATGCRVAWDETGGDPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEE---LHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLAT 783
            ATGC V  D T     L I+VPA IEPVAPYE+VEQFRASIVV+GPMLARC EARVA+PGGDDFGPRPIDMHVRGL ELGAEF+T HGYIHA + NL GARVLLEFPSVGATENL+MAAVRAKGTTVIDNAAREPEIADLCELLNKMGA+I G+GSS + I+G E    LHSADHTVIPDRIEAATYL A+GITGGE+TVAGARH HM+MLCQKLGEMGMRIS D DGIWA A RR+ S+DC +LPYPG+ATDFKPFLV LLAT
Sbjct:   62 ATGCSVTRDGT----TLRIDVPAEIEPVAPYEIVEQFRASIVVMGPMLARCREARVAMPGGDDFGPRPIDMHVRGLQELGAEFDTAHGYIHARSQNLQGARVLLEFPSVGATENLVMAAVRAKGTTVIDNAAREPEIADLCELLNKMGAQIIGAGSSAITIDGVESQNALHSADHTVIPDRIEAATYLCAVGITGGEITVAGARHEHMSMLCQKLGEMGMRISHDPDGIWALAPRRMTSADCQSLPYPGIATDFKPFLVTLLAT 321          
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A3M2FST7_ACTSX (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2FST7_ACTSX)

HSP 1 Score: 390 bits (1001), Expect = 1.080e-131
Identity = 195/263 (74.14%), Postives = 222/263 (84.41%), Query Frame = 1
Query:    7 GCRVAWDETGG----DPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLAT 783
            G RV W +       D VL I++PA I PVAPYELVE+FRASIVVLGP+LARCGEARVALPGGDDFGPRPIDMH+RGLA LGAEF+T HGY+   APNL+G+RVLLEFPSVGATEN++MAAVRAKGTT IDNAAREPEIADLC +LNKMGARI G+GSST+VIEG +EL    H V+PDRIEAATYLAA+G+ GGE+ VA AR  HM +LCQKLGEMGMRIS D DG+WA A RRLR+ DCSTLPYPG+ATD+KP +V LL+T
Sbjct:  122 GARVRWRDPDASLDDDRVLEIDMPATITPVAPYELVERFRASIVVLGPLLARCGEARVALPGGDDFGPRPIDMHLRGLAALGAEFDTSHGYVEGRAPNLVGSRVLLEFPSVGATENIVMAAVRAKGTTTIDNAAREPEIADLCGMLNKMGARIEGAGSSTIVIEGVDELGPVRHRVVPDRIEAATYLAAVGMAGGEIVVADARLDHMDLLCQKLGEMGMRISADPDGLWAMANRRLRAVDCSTLPYPGIATDYKPLIVTLLST 384          
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A7Y2DBZ5_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DBZ5_9ACTN)

HSP 1 Score: 367 bits (941), Expect = 1.800e-123
Identity = 183/257 (71.21%), Postives = 213/257 (82.88%), Query Frame = 1
Query:    7 GCRVAWDETGGDPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALL 777
            GC VA+     D VL I+VPA I PVAPYELVEQFRASIVVLGP+L RC EA+VA+PGGDDFGPRPIDMHVRGL  LG  F++ HGYI   A NL+G  VLLEFPSVGATEN+LMAAVRAKGTTVI+NAAREPEI DL   L +MGA+++G+G+ T+ +EG + + + DHT IPDRIE ATYLAA+GI GGELT+ GAR  H+ ML QKLG+MGMRISPDADG+WA+AGRRL S+D STLPYPGLATD+KPFLVA+L
Sbjct:   65 GCTVAYH----DSVLTIDVPAEITPVAPYELVEQFRASIVVLGPLLGRCREAQVAMPGGDDFGPRPIDMHVRGLETLGVTFDSAHGYIRGHADNLVGNEVLLEFPSVGATENILMAAVRAKGTTVIENAAREPEICDLAAFLGRMGAKVSGAGTPTITVEGVDHMTAVDHTTIPDRIEVATYLAAVGIAGGELTLQGARADHIDMLAQKLGDMGMRISPDADGLWAFAGRRLTSADISTLPYPGLATDYKPFLVAML 317          
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A6B1EE32_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EE32_9ACTN)

HSP 1 Score: 365 bits (938), Expect = 4.980e-123
Identity = 189/264 (71.59%), Postives = 215/264 (81.44%), Query Frame = 1
Query:    1 ATGCRVAWDETGGDPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEG---AEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLAT 783
            A GC V WD      +L I+VPA I PVAPY++VE+FRAS+VVLGPMLARCGEA+VALPGGDDFGPRPIDMHV+GL ELGA  +  HGY+ A+A  LLG RV+LEFPSVGATENLLMAAV AKG TVIDNAAREPEI+DLCE L++MGARI G GSSTL +EG   A  LH ADH+V+PDRI AAT+LAALG+  GE+ VAGARH HM +LCQKL EMGM I+PD  GI A A RRL S DCSTLPYPG+ATD+ PFLVA+LAT
Sbjct:   59 AVGCTVEWDPVQPS-LLHIDVPAEISPVAPYDIVERFRASVVVLGPMLARCGEAKVALPGGDDFGPRPIDMHVQGLVELGAAVDVVHGYVEASAVELLGGRVVLEFPSVGATENLLMAAVAAKGATVIDNAAREPEISDLCEFLSRMGARIEGVGSSTLTVEGSGSASPLHPADHSVVPDRIVAATHLAALGVASGEVFVAGARHDHMELLCQKLTEMGMVITPDDGGIRAIAPRRLDSVDCSTLPYPGIATDYLPFLVAMLAT 321          
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A6B0WPD9_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WPD9_9ACTN)

HSP 1 Score: 362 bits (929), Expect = 1.150e-121
Identity = 188/264 (71.21%), Postives = 216/264 (81.82%), Query Frame = 1
Query:    1 ATGCRVAWDETGGDPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGA---EELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLAT 783
            A GC V WD T  D  + I+VPA I PVAPY++VE+FRAS+VVLGPMLAR GEARVALPGGDDFGPRPIDMHVRGL ELGA+ +  HGYI A+A  LLG RV+LEFPSVGATENLLMAAV AKGTTVIDNAAREPEI+DLC+ L +MGARI G+GSSTL +EGA   + L +ADH+V+PDRI AATYLAALG+  G++ VAGAR+ HM +L QKL EMGM I+PD DGI A A RRL S DCSTLPYPG+ATD  PFLV ++AT
Sbjct:   59 AVGCAVQWDPTD-DAAIRIDVPAEITPVAPYDIVERFRASVVVLGPMLARSGEARVALPGGDDFGPRPIDMHVRGLVELGAQVDVVHGYIEASAAELLGGRVVLEFPSVGATENLLMAAVAAKGTTVIDNAAREPEISDLCQFLGRMGARIEGAGSSTLEVEGAGTAQFLRAADHSVVPDRIVAATYLAALGVASGDVFVAGARYDHMELLSQKLTEMGMLITPDTDGIRAIAPRRLDSVDCSTLPYPGVATDHLPFLVVMMAT 321          
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: UPI001F42F8CF (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F42F8CF)

HSP 1 Score: 352 bits (903), Expect = 5.980e-118
Identity = 176/235 (74.89%), Postives = 200/235 (85.11%), Query Frame = 1
Query:   79 PVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLAT 783
            P APYELVE+ RASIVVLGP+LAR G ARVALPGGDDFGPRPIDMH+RGL ELGA FE  HGYI A A  L+GARVLLEFPSVGATEN+L+AAV AKGTTVIDNAAREPEIADL   LN+MGAR+ G+GSST+ ++G E+L   +HTVIPDR+EAAT+LAALG+ GGEL +AGARH HM M   KLGEMGMRISPD++GIWA + RRLR+ D STLPYPGLATD+KP  VA+LAT
Sbjct:   71 PEAPYELVERMRASIVVLGPLLARYGRARVALPGGDDFGPRPIDMHLRGLEELGASFEFAHGYIEARADQLIGARVLLEFPSVGATENVLLAAVLAKGTTVIDNAAREPEIADLASFLNRMGARVLGAGSSTIQVDGVEQLAPVEHTVIPDRVEAATFLAALGVAGGELLLAGARHDHMDMYVAKLGEMGMRISPDSEGIWAMSARRLRAVDVSTLPYPGLATDYKPLFVAMLAT 305          
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A538J9L8_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538J9L8_9ACTN)

HSP 1 Score: 343 bits (879), Expect = 3.930e-114
Identity = 170/244 (69.67%), Postives = 199/244 (81.56%), Query Frame = 1
Query:   49 LVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLA 780
            L I V   I P APYELVEQ RASIVVLGP+L RCG+ARVALPGGDDFGPRPIDMH RGL  LG EF + HGY+ A    L G+R++LEFPSVGATEN+LMAAVRAKGTT+IDNAAREPEIADL   LN+MGA++ G+GSST+ +EG E LH  +HTV+PDRIEA T+LAA+G  GGE+T+ GAR  HM M+ QKLG+MGMRISP ++G+WA   RRLRS D +TLPYPG+ATD+KPF VALLA
Sbjct:   72 LRIRVGPDIVPEAPYELVEQMRASIVVLGPLLTRCGQARVALPGGDDFGPRPIDMHQRGLEALGVEFTSAHGYVEARCDQLTGSRIVLEFPSVGATENILMAAVRAKGTTLIDNAAREPEIADLAAFLNRMGAQVLGAGSSTIEVEGVEGLHPVEHTVVPDRIEAGTFLAAVGAAGGEITIEGARPDHMDMVVQKLGDMGMRISPASEGVWAQRTRRLRSVDVATLPYPGIATDYKPFFVALLA 315          
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A538B6X4_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538B6X4_9ACTN)

HSP 1 Score: 342 bits (878), Expect = 5.230e-114
Identity = 175/247 (70.85%), Postives = 200/247 (80.97%), Query Frame = 1
Query:   40 DPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLA 780
            D VL I+V   I P APYELVE+ RASIVVLGP+LAR G ARVALPGGD+FGPRPIDMH+ GL  LG  F++ HGYI A    L+G RV+LEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLC  L +MGARI G G+ST+ IEG +EL   DHTVIPDRIEA T+LAA+G+ GGE+ + GAR  HM ML +KLGEMGMR+SP +DGIWA A  RLR+ D STLPYPG+ATD+KPF VA+LA
Sbjct:   69 DHVLTIDVGTDITPEAPYELVERMRASIVVLGPLLARNGYARVALPGGDNFGPRPIDMHISGLEALGVRFDSAHGYIEARCDALIGNRVVLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCAFLVRMGARIVGGGTSTIEIEGVDELSPVDHTVIPDRIEAGTFLAAVGVAGGEIALEGARPDHMDMLIRKLGEMGMRVSPSSDGIWAQAKGRLRAVDVSTLPYPGIATDYKPFFVAMLA 315          
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: UPI001E48A0A5 (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E48A0A5)

HSP 1 Score: 341 bits (874), Expect = 2.110e-113
Identity = 175/249 (70.28%), Postives = 203/249 (81.53%), Query Frame = 1
Query:   37 GDPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLAT 783
            GD  LVIE    + P APYELVE+ RASIVV+GP++AR G ARVALPGGDDFGPRPIDMH+R L +LGA FET HGYI A A  L+G R+LLEFPSVGATEN LMAAV AKGTTVIDNAAREPEIADL   L +MGA+I G+GSST+ +EG +EL + +H V+PDRIEAAT+LAA+GI GGE+T+ GAR  HM ML  KLGEMGMRISP ADG+WA A  RL ++D STLPYPG+ATD+KP LVA+LAT
Sbjct:   68 GDHGLVIEHHDGLVPEAPYELVERMRASIVVMGPLVARYGRARVALPGGDDFGPRPIDMHLRALEQLGATFETAHGYIEARAERLVGTRILLEFPSVGATENALMAAVLAKGTTVIDNAAREPEIADLASFLTRMGAQILGAGSSTIEVEGVDELSAVEHRVVPDRIEAATFLAAVGIAGGEITLTGARADHMDMLIAKLGEMGMRISPTADGLWAMAPGRLLATDVSTLPYPGVATDYKPLLVAMLAT 316          
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Match: A0A538HE95_9ACTN (UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538HE95_9ACTN)

HSP 1 Score: 339 bits (870), Expect = 9.060e-113
Identity = 167/244 (68.44%), Postives = 199/244 (81.56%), Query Frame = 1
Query:   49 LVIEVPAIIEPVAPYELVEQFRASIVVLGPMLARCGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGARVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGARIAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGARHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATDFKPFLVALLA 780
            L ++VP  + P APYELVE+ RASI+VLGP+LA CG ARVALPGGDDFGPRPIDMH+RGL  LGA FE  HGYI   A  L G R+LLEFPSVGATEN+LMAAVRAKG TVIDNAAREPEIADL   L++MGAR+ G+G+ST+ +EG EEL S DHT++PDR+EAAT+LAA+G+  GE+ + GAR  HM ML QKLGEMGMRISP + G+WAY+  RLR+ D +TLPYPG+ATD+KP  VALL+
Sbjct:   72 LTLDVPEELTPEAPYELVERMRASIIVLGPLLASCGVARVALPGGDDFGPRPIDMHLRGLEALGASFEAAHGYIEGRAEQLTGTRILLEFPSVGATENILMAAVRAKGVTVIDNAAREPEIADLAAFLDRMGARVTGAGTSTIHVEGVEELASVDHTLVPDRVEAATFLAAVGLARGEIFIEGARADHMDMLVQKLGEMGMRISPASGGLWAYSRGRLRAVDVATLPYPGIATDYKPLFVALLS 315          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90990.21096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8L967_9ACTN1.540e-14180.30UDP-N-acetylglucosamine 1-carboxyvinyltransferase ... [more]
A0A3M2FST7_ACTSX1.080e-13174.14UDP-N-acetylglucosamine 1-carboxyvinyltransferase ... [more]
A0A7Y2DBZ5_9ACTN1.800e-12371.21UDP-N-acetylglucosamine 1-carboxyvinyltransferase ... [more]
A0A6B1EE32_9ACTN4.980e-12371.59UDP-N-acetylglucosamine 1-carboxyvinyltransferase ... [more]
A0A6B0WPD9_9ACTN1.150e-12171.21UDP-N-acetylglucosamine 1-carboxyvinyltransferase ... [more]
UPI001F42F8CF5.980e-11874.89UDP-N-acetylglucosamine 1-carboxyvinyltransferase ... [more]
A0A538J9L8_9ACTN3.930e-11469.67UDP-N-acetylglucosamine 1-carboxyvinyltransferase ... [more]
A0A538B6X4_9ACTN5.230e-11470.85UDP-N-acetylglucosamine 1-carboxyvinyltransferase ... [more]
UPI001E48A0A52.110e-11370.28UDP-N-acetylglucosamine 1-carboxyvinyltransferase ... [more]
A0A538HE95_9ACTN9.060e-11368.44UDP-N-acetylglucosamine 1-carboxyvinyltransferase ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90990contigM-pyrifera_M_contig90990:2..784 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score282.7
Seed ortholog evalue1.7e-73
Seed eggNOG ortholog1313172.YM304_10760
Preferred namemurA
KEGG rclassRC00350
KEGG koko:K00790
KEGG ReactionR00660
KEGG Pathwayko00520,ko00550,ko01100,map00520,map00550,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0040007
EggNOG free text desc.Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EggNOG OGs2GJPW@201174,4CMR2@84992,COG0766@1,COG0766@2
EC2.5.1.7
COG Functional cat.M
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01011
Exons1
Model size783
Cds size783
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816822.3374708-CDS-M-pyrifera_M_contig90990:1..7841622816822.3374708-CDS-M-pyrifera_M_contig90990:1..784Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90990 2..784 +
1692278198.7545705-CDS-M-pyrifera_M_contig90990:1..7841692278198.7545705-CDS-M-pyrifera_M_contig90990:1..784Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90990 2..784 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90990.21096.1prot_M-pyrifera_M_contig90990.21096.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90990 2..784 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90990.21096.1

>prot_M-pyrifera_M_contig90990.21096.1 ID=prot_M-pyrifera_M_contig90990.21096.1|Name=mRNA_M-pyrifera_M_contig90990.21096.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=261bp
ATGCRVAWDETGGDPVLVIEVPAIIEPVAPYELVEQFRASIVVLGPMLAR
CGEARVALPGGDDFGPRPIDMHVRGLAELGAEFETKHGYIHATAPNLLGA
RVLLEFPSVGATENLLMAAVRAKGTTVIDNAAREPEIADLCELLNKMGAR
IAGSGSSTLVIEGAEELHSADHTVIPDRIEAATYLAALGITGGELTVAGA
RHGHMAMLCQKLGEMGMRISPDADGIWAYAGRRLRSSDCSTLPYPGLATD
FKPFLVALLAT
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mRNA from alignment at M-pyrifera_M_contig90990:2..784+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90990.21096.1 ID=mRNA_M-pyrifera_M_contig90990.21096.1|Name=mRNA_M-pyrifera_M_contig90990.21096.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig90990:2..784+ (Macrocystis pyrifera P11B4 male)
GCCACGGGGTGCCGGGTCGCGTGGGACGAGACCGGCGGCGATCCGGTGCT GGTGATCGAGGTTCCGGCCATCATCGAACCGGTCGCGCCCTATGAACTGG TCGAACAGTTCCGAGCGTCGATCGTCGTGCTCGGCCCGATGTTGGCCCGC TGCGGCGAGGCCCGGGTGGCCCTCCCCGGTGGCGACGATTTCGGGCCCCG CCCGATCGACATGCACGTGCGCGGACTCGCCGAGCTGGGGGCCGAGTTCG AGACCAAGCACGGCTACATCCACGCGACCGCGCCGAACCTCCTCGGGGCT CGCGTGCTGCTCGAGTTCCCCAGTGTCGGTGCCACCGAGAACCTGCTGAT GGCGGCGGTGCGGGCGAAGGGCACCACCGTCATCGACAATGCGGCCCGAG AGCCCGAGATCGCCGACCTCTGCGAGCTGCTCAACAAGATGGGAGCCCGC ATCGCCGGCTCCGGTTCCTCCACCCTGGTGATCGAGGGGGCCGAGGAGTT GCACAGCGCCGACCACACCGTCATCCCCGATCGGATCGAGGCCGCCACCT ATCTGGCCGCGCTCGGCATCACCGGTGGCGAACTCACCGTTGCGGGGGCC CGCCACGGACACATGGCGATGCTGTGCCAGAAGCTCGGTGAGATGGGCAT GCGCATCTCACCCGACGCCGACGGGATCTGGGCCTACGCCGGACGGCGGC TGCGCTCCAGCGACTGTTCGACCCTGCCTTATCCGGGTCTGGCCACCGAC TTCAAGCCGTTCCTCGTCGCCTTGCTGGCCACG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90990:2..784+

>mRNA_M-pyrifera_M_contig90990.21096.1 ID=mRNA_M-pyrifera_M_contig90990.21096.1|Name=mRNA_M-pyrifera_M_contig90990.21096.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1566bp|location=Sequence derived from alignment at M-pyrifera_M_contig90990:2..784+ (Macrocystis pyrifera P11B4 male)
GCCACGGGGTGCCGGGTCGCGTGGGACGAGACCGGCGGCGATCCGGTGCT
GGTGATCGAGGTTCCGGCCATCATCGAACCGGTCGCGCCCTATGAACTGG
TCGAACAGTTCCGAGCGTCGATCGTCGTGCTCGGCCCGATGTTGGCCCGC
TGCGGCGAGGCCCGGGTGGCCCTCCCCGGTGGCGACGATTTCGGGCCCCG
CCCGATCGACATGCACGTGCGCGGACTCGCCGAGCTGGGGGCCGAGTTCG
AGACCAAGCACGGCTACATCCACGCGACCGCGCCGAACCTCCTCGGGGCT
CGCGTGCTGCTCGAGTTCCCCAGTGTCGGTGCCACCGAGAACCTGCTGAT
GGCGGCGGTGCGGGCGAAGGGCACCACCGTCATCGACAATGCGGCCCGAG
AGCCCGAGATCGCCGACCTCTGCGAGCTGCTCAACAAGATGGGAGCCCGC
ATCGCCGGCTCCGGTTCCTCCACCCTGGTGATCGAGGGGGCCGAGGAGTT
GCACAGCGCCGACCACACCGTCATCCCCGATCGGATCGAGGCCGCCACCT
ATCTGGCCGCGCTCGGCATCACCGGTGGCGAACTCACCGTTGCGGGGGCC
CGCCACGGACACATGGCGATGCTGTGCCAGAAGCTCGGTGAGATGGGCAT
GCGCATCTCACCCGACGCCGACGGGATCTGGGCCTACGCCGGACGGCGGC
TGCGCTCCAGCGACTGTTCGACCCTGCCTTATCCGGGTCTGGCCACCGAC
TTCAAGCCGTTCCTCGTCGCCTTGCTGGCCACGGCCACGGGGTGCCGGGT
CGCGTGGGACGAGACCGGCGGCGATCCGGTGCTGGTGATCGAGGTTCCGG
CCATCATCGAACCGGTCGCGCCCTATGAACTGGTCGAACAGTTCCGAGCG
TCGATCGTCGTGCTCGGCCCGATGTTGGCCCGCTGCGGCGAGGCCCGGGT
GGCCCTCCCCGGTGGCGACGATTTCGGGCCCCGCCCGATCGACATGCACG
TGCGCGGACTCGCCGAGCTGGGGGCCGAGTTCGAGACCAAGCACGGCTAC
ATCCACGCGACCGCGCCGAACCTCCTCGGGGCTCGCGTGCTGCTCGAGTT
CCCCAGTGTCGGTGCCACCGAGAACCTGCTGATGGCGGCGGTGCGGGCGA
AGGGCACCACCGTCATCGACAATGCGGCCCGAGAGCCCGAGATCGCCGAC
CTCTGCGAGCTGCTCAACAAGATGGGAGCCCGCATCGCCGGCTCCGGTTC
CTCCACCCTGGTGATCGAGGGGGCCGAGGAGTTGCACAGCGCCGACCACA
CCGTCATCCCCGATCGGATCGAGGCCGCCACCTATCTGGCCGCGCTCGGC
ATCACCGGTGGCGAACTCACCGTTGCGGGGGCCCGCCACGGACACATGGC
GATGCTGTGCCAGAAGCTCGGTGAGATGGGCATGCGCATCTCACCCGACG
CCGACGGGATCTGGGCCTACGCCGGACGGCGGCTGCGCTCCAGCGACTGT
TCGACCCTGCCTTATCCGGGTCTGGCCACCGACTTCAAGCCGTTCCTCGT
CGCCTTGCTGGCCACG
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