mRNA_M-pyrifera_M_contig90985.21093.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90985.21093.1
Unique NamemRNA_M-pyrifera_M_contig90985.21093.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90985.21093.1 vs. uniprot
Match: A0A517QFJ3_9PLAN (ABC transporter ATP-binding protein YtrB n=7 Tax=Gimesia TaxID=1649453 RepID=A0A517QFJ3_9PLAN)

HSP 1 Score: 491 bits (1265), Expect = 1.460e-174
Identity = 246/260 (94.62%), Postives = 256/260 (98.46%), Query Frame = 1
Query:    1 KKQALANVCLSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFGLDPVADPPGVLSRIGHLSETRDLPPWMTIRELFEFTRAFYPKWDPVYAEELRMMFELTMTQKVSTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQVAILDQGQLLLTSPLDEVLVSHFRLTVSFAEPQPFFPQLTGALTWTGSGKEWDIICNGQRQELEAALKDLDAEIL 780
            KKQALANV LSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFGLDPVADPPGVLSRIGHLSE+RDLPPWMT+RELFEFTRAFYPKWDPVYAEELRMMFELTMTQKV+TLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSD++A+LDQGQLLLTS LDEVLVSH+RLTVSFAEPQP FP LTGALTWTGSGKEWD+ICNGQRQELEAAL++LDAEIL
Sbjct:   17 KKQALANVSLSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFGLDPVADPPGVLSRIGHLSESRDLPPWMTVRELFEFTRAFYPKWDPVYAEELRMMFELTMTQKVTTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDRIAVLDQGQLLLTSTLDEVLVSHYRLTVSFAEPQPCFPVLTGALTWTGSGKEWDVICNGQRQELEAALRELDAEIL 276          
BLAST of mRNA_M-pyrifera_M_contig90985.21093.1 vs. uniprot
Match: A0A518IKK3_9PLAN (ABC transporter ATP-binding protein YtrB n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IKK3_9PLAN)

HSP 1 Score: 468 bits (1203), Expect = 4.090e-165
Identity = 233/260 (89.62%), Postives = 248/260 (95.38%), Query Frame = 1
Query:    1 KKQALANVCLSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFGLDPVADPPGVLSRIGHLSETRDLPPWMTIRELFEFTRAFYPKWDPVYAEELRMMFELTMTQKVSTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQVAILDQGQLLLTSPLDEVLVSHFRLTVSFAEPQPFFPQLTGALTWTGSGKEWDIICNGQRQELEAALKDLDAEIL 780
            KKQAL NV LSVPEGAVFGLVGENGAGKTTLLKH+LGFLKPQ GTVRVFGLDPVADPPGVL RIGHLSETRDLP WMTIRELFEFTRAFYPKWDPVYAEELRMMFEL++ QKV TLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDP+VRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSD+VAILDQG++LLTSPLDEVLVSH++LTVSF EPQPFFP+L GALTW+GSG+EW IICNGQ+QELE AL++L AEIL
Sbjct:   17 KKQALDNVSLSVPEGAVFGLVGENGAGKTTLLKHVLGFLKPQQGTVRVFGLDPVADPPGVLGRIGHLSETRDLPTWMTIRELFEFTRAFYPKWDPVYAEELRMMFELSLNQKVPTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPVVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDRVAILDQGKILLTSPLDEVLVSHYQLTVSFQEPQPFFPELEGALTWSGSGREWKIICNGQKQELEVALQELKAEIL 276          
BLAST of mRNA_M-pyrifera_M_contig90985.21093.1 vs. uniprot
Match: A0A517VM68_9PLAN (ABC transporter ATP-binding protein YtrB n=11 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VM68_9PLAN)

HSP 1 Score: 454 bits (1168), Expect = 8.750e-160
Identity = 222/260 (85.38%), Postives = 244/260 (93.85%), Query Frame = 1
Query:    1 KKQALANVCLSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFGLDPVADPPGVLSRIGHLSETRDLPPWMTIRELFEFTRAFYPKWDPVYAEELRMMFELTMTQKVSTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQVAILDQGQLLLTSPLDEVLVSHFRLTVSFAEPQPFFPQLTGALTWTGSGKEWDIICNGQRQELEAALKDLDAEIL 780
            KKQAL++V LSVPEG VFGLVGENGAGKTTLLKH+LGFLKPQ G+VRVFGLDPVADPPGVL RIGHLSE RDLP WMT+REL EFTRAFYPKWDPVYAEELRMMFEL++ QKV TLSRGQLARAGLL+ALAHRPPLLVLDEPSSGLDP+VRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSD++AILDQG+LLLTSPLDEVLVSH++LT+ F EPQP+FPQLTGAL W+GSG+EW I+CNGQ+QELE  L+ L+AEIL
Sbjct:   17 KKQALSDVSLSVPEGCVFGLVGENGAGKTTLLKHVLGFLKPQQGSVRVFGLDPVADPPGVLGRIGHLSENRDLPAWMTVRELIEFTRAFYPKWDPVYAEELRMMFELSLNQKVPTLSRGQLARAGLLVALAHRPPLLVLDEPSSGLDPVVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDRIAILDQGKLLLTSPLDEVLVSHYQLTIRFLEPQPYFPQLTGALMWSGSGREWKIVCNGQKQELETELEQLEAEIL 276          
BLAST of mRNA_M-pyrifera_M_contig90985.21093.1 vs. uniprot
Match: A0A517WPE8_9PLAN (ABC transporter ATP-binding protein YtrB n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WPE8_9PLAN)

HSP 1 Score: 449 bits (1154), Expect = 1.140e-157
Identity = 221/260 (85.00%), Postives = 241/260 (92.69%), Query Frame = 1
Query:    1 KKQALANVCLSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFGLDPVADPPGVLSRIGHLSETRDLPPWMTIRELFEFTRAFYPKWDPVYAEELRMMFELTMTQKVSTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQVAILDQGQLLLTSPLDEVLVSHFRLTVSFAEPQPFFPQLTGALTWTGSGKEWDIICNGQRQELEAALKDLDAEIL 780
            KKQAL+ V LSVPEG VFGLVGENGAGKTT+LKH+LGFLKPQ G VRVFGLDPVADPPGVL RIGHLSE RDLP WM+IRELFEFTRAFYPKWDPVYAEELR MFELT+ QKV TLSRGQ ARAGLLLALAHRPPLLVLDEPSSGLDP+VRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQ+AILDQG++LL SPLD+VLVSH++LTVSF EPQP+FPQLTGALTW+GSG+EW I+CNGQ++ELEA L+ +  EIL
Sbjct:   17 KKQALSEVNLSVPEGCVFGLVGENGAGKTTMLKHVLGFLKPQQGVVRVFGLDPVADPPGVLGRIGHLSENRDLPTWMSIRELFEFTRAFYPKWDPVYAEELRNMFELTLNQKVPTLSRGQKARAGLLLALAHRPPLLVLDEPSSGLDPVVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQIAILDQGRILLASPLDQVLVSHYQLTVSFPEPQPYFPQLTGALTWSGSGREWKIVCNGQKKELEAELEAMHCEIL 276          
BLAST of mRNA_M-pyrifera_M_contig90985.21093.1 vs. uniprot
Match: A0A3N5VUK0_9PLAN (ABC transporter ATP-binding protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3N5VUK0_9PLAN)

HSP 1 Score: 331 bits (848), Expect = 4.190e-111
Identity = 164/257 (63.81%), Postives = 199/257 (77.43%), Query Frame = 1
Query:   10 ALANVCLSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFGLDPVADPPGVLSRIGHLSETRDLPPWMTIRELFEFTRAFYPKWDPVYAEELRMMFELTMTQKVSTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQVAILDQGQLLLTSPLDEVLVSHFRLTVSFAEPQPFFPQLTGALTWTGSGKEWDIICNGQRQELEAALKDLDAEIL 780
            AL +VCLSVP GAV+GLVG NGAGKTTL+KHILG L+ +SG+VRVFGLDPVADP GVLSRIG+LSE RDLP WM + EL  ++RAFYP WD  YAEELR  F L  T ++  LS+GQ ARAGLL+ALAHRP LLVLDEPSSGLDP+VR+DIL AIIRT+ DEGRTVLFSSHLL+EV+RV+D V ++  G + L++PLD +  SH  +TV FAE +P  P L G L W G G+EW  +C G  +EL+A + +  A I+
Sbjct:   20 ALDSVCLSVPRGAVYGLVGANGAGKTTLIKHILGLLRVESGSVRVFGLDPVADPVGVLSRIGYLSEERDLPGWMRVHELIWYSRAFYPAWDDAYAEELRQAFALDATARIKDLSKGQKARAGLLIALAHRPELLVLDEPSSGLDPVVRRDILGAIIRTIADEGRTVLFSSHLLEEVERVADHVTMISHGTIALSAPLDAIRQSHRCVTVRFAESRPQPPALAGVLRWDGDGREWTAVCRGGSRELQATVAEWGARIV 276          
BLAST of mRNA_M-pyrifera_M_contig90985.21093.1 vs. uniprot
Match: A0A6M5YJA1_9BACT (ABC transporter, ATP-binding protein n=1 Tax=Frigoriglobus tundricola TaxID=2774151 RepID=A0A6M5YJA1_9BACT)

HSP 1 Score: 322 bits (824), Expect = 2.340e-107
Identity = 160/260 (61.54%), Postives = 196/260 (75.38%), Query Frame = 1
Query:    4 KQALANVCLSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFGLDPVADPPGVLSRIGHLSETRDLPPWMTIRELFEFTRAFYPKWDPVYAEELRMMFELTMTQKVSTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQVAILDQGQLLLTSPLDEVLVSHFRLTVSFAEPQPFFPQLTGALTWTGSGKEWDIICNGQRQELEAALKDLDAEILA 783
            K AL  V LSVP G VFGLVG NGAGKTTL++H+LG LK Q+G+VRVFG +PVADP GVL+RIG+LSE  DLP WM + E   ++RAFYP+WD  YAEELR  FEL    ++  LS+GQ AR GLL+ALAHRP LLVLDEPSSGLDPLVR+DIL+A+IRT+ DEGRTVLFSSHLLDEV+RVSD V +L+QG+++ ++PLDE+  SH  LTV F  PQ   P L GAL W G+G EW  +C G+  +L  A+      ++A
Sbjct:   25 KVALDRVSLSVPRGVVFGLVGANGAGKTTLIRHVLGLLKAQTGSVRVFGANPVADPAGVLARIGYLSEENDLPGWMRVPEFVRYSRAFYPRWDDGYAEELRHTFELPAGTRICNLSKGQRARVGLLVALAHRPELLVLDEPSSGLDPLVRRDILEAVIRTIADEGRTVLFSSHLLDEVERVSDHVCLLNQGRIVFSAPLDELKESHRSLTVRFDAPQARPPALAGALAWKGTGHEWTAVCRGRLSDLAPAVAASGGRVVA 284          
BLAST of mRNA_M-pyrifera_M_contig90985.21093.1 vs. uniprot
Match: A0A4P5XZ56_9BACT (Multidrug ABC transporter ATP-binding protein n=3 Tax=Planctomycetes TaxID=203682 RepID=A0A4P5XZ56_9BACT)

HSP 1 Score: 321 bits (823), Expect = 2.540e-107
Identity = 160/259 (61.78%), Postives = 198/259 (76.45%), Query Frame = 1
Query:    4 KQALANVCLSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFGLDPVADPPGVLSRIGHLSETRDLPPWMTIRELFEFTRAFYPKWDPVYAEELRMMFELTMTQKVSTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQVAILDQGQLLLTSPLDEVLVSHFRLTVSFAEPQPFFPQLTGALTWTGSGKEWDIICNGQRQELEAALKDLDAEIL 780
            K AL ++ LSVP G VFGL+G NGAGKTTL+KHILG LK QSG+VRVFGLDPV +P G L RIG+LSE RDLP WM + EL  +T+AF+P WD  YAEELR  F+L    KV  LSRGQ ARAGLL+ LAHRP LLVLDEPSSGLDP+VR+DIL AIIRT+ DEGRTVLFSSHLLDEV+RV+D+VAI+ QG+++LT+ +DE+  SH R+T+ F +P    P L G L++ G G EW  IC+G+  +L  A + + A ++
Sbjct:   25 KTALDDLSLSVPRGGVFGLIGGNGAGKTTLIKHILGMLKAQSGSVRVFGLDPVENPVGTLGRIGYLSEERDLPNWMRVGELMRYTQAFFPNWDEKYAEELREAFDLDGNAKVKNLSRGQRARAGLLITLAHRPELLVLDEPSSGLDPVVRRDILGAIIRTIADEGRTVLFSSHLLDEVERVADRVAIIHQGRIMLTASMDEIKESHRRVTLRFGQPTDRPPSLVGTLSFEGQGSEWSYICSGESGQLRRAAEAIGATVV 283          
BLAST of mRNA_M-pyrifera_M_contig90985.21093.1 vs. uniprot
Match: A0A2V5U9F8_9BACT (ABC transporter ATP-binding protein n=6 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5U9F8_9BACT)

HSP 1 Score: 321 bits (822), Expect = 8.300e-107
Identity = 161/259 (62.16%), Postives = 202/259 (77.99%), Query Frame = 1
Query:    4 KQALANVCLSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFGLDPVADPPGVLSRIGHLSETRDLPPWMTIRELFEFTRAFYPKWDPVYAEELRMMFELTMTQKVSTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQVAILDQGQLLLTSPLDEVLVSHFRLTVSFAEPQPFFPQLTGALTWTGSGKEWDIICNGQRQELEAALKDLDAEIL 780
            K AL +V L+V  G VFGLVG NGAGKTTL+KHILG LK +SG++RVF LDPVA+P  VLSR+G LSE RDLP WM + EL  +TRAF+ +WD  YAE+LR  F+L    ++  LSRG+LA+AGLL+ALAHRP LLVLDEPSSGLDP+VR+++L+AI+RTV DEGRTV FSSHLLDE++RVSD++A++  G+++L   LDE+L SHFRLT+ F  P P  P+L GAL  TGSG EW ++CNG R EL AA+  L A I+
Sbjct:   25 KLALDSVSLNVERGQVFGLVGANGAGKTTLIKHILGLLKAESGSLRVFDLDPVAEPVAVLSRVGFLSEDRDLPGWMRVDELIRYTRAFHAEWDAAYAEQLRGQFQLDPAARIKQLSRGELAKAGLLVALAHRPELLVLDEPSSGLDPIVRREMLEAIVRTVADEGRTVFFSSHLLDEIERVSDRLAMMACGRVVLQGRLDEILESHFRLTLRFPTPPPTPPKLAGALLVTGSGLEWTVLCNGARAELAAAVVRLGARIV 283          
BLAST of mRNA_M-pyrifera_M_contig90985.21093.1 vs. uniprot
Match: A0A5K7X4L2_9BACT (Efflux ABC transporter n=1 Tax=Lacipirellula parvula TaxID=2650471 RepID=A0A5K7X4L2_9BACT)

HSP 1 Score: 320 bits (819), Expect = 1.030e-106
Identity = 158/259 (61.00%), Postives = 199/259 (76.83%), Query Frame = 1
Query:    4 KQALANVCLSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFGLDPVADPPGVLSRIGHLSETRDLPPWMTIRELFEFTRAFYPKWDPVYAEELRMMFELTMTQKVSTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQVAILDQGQLLLTSPLDEVLVSHFRLTVSFAEPQPFFPQLTGALTWTGSGKEWDIICNGQRQELEAALKDLDAEIL 780
            K AL +V L+VP G VFGL+G NGAGKTTL+KH+LG L+ + G+VRVFG DP+A+P GVL RIG+LSE RDLP WM +REL  +T+AF+P WD  YAEELR  F+L    ++ TLSRGQ ARAGLL ALAHRPPLLVLDEPSSGLDP+VR+DIL AIIRT+ +EGRTVLFSSHLLDEV+RV+D+VAI+ QG++LLT+ +++V   H R+T+ F EP    P L GA + +G G EW  +CNG   +L +A   L A ++
Sbjct:   25 KMALNDVSLTVPTGGVFGLIGGNGAGKTTLIKHLLGMLRAEQGSVRVFGQDPIANPVGVLGRIGYLSEDRDLPDWMRVRELMNYTQAFFPNWDERYAEELREAFDLNPDARIKTLSRGQRARAGLLAALAHRPPLLVLDEPSSGLDPVVRRDILSAIIRTIAEEGRTVLFSSHLLDEVERVADRVAIIHQGRVLLTATMEDVKDRHRRVTLRFNEPHERPPALVGAFSHSGGGFEWTYLCNGDSDQLRSAAATLGATVV 283          
BLAST of mRNA_M-pyrifera_M_contig90985.21093.1 vs. uniprot
Match: UPI00029B27EB (ABC transporter ATP-binding protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00029B27EB)

HSP 1 Score: 320 bits (820), Expect = 1.200e-106
Identity = 160/257 (62.26%), Postives = 195/257 (75.88%), Query Frame = 1
Query:   10 ALANVCLSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFGLDPVADPPGVLSRIGHLSETRDLPPWMTIRELFEFTRAFYPKWDPVYAEELRMMFELTMTQKVSTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQVAILDQGQLLLTSPLDEVLVSHFRLTVSFAEPQPFFPQLTGALTWTGSGKEWDIICNGQRQELEAALKDLDAEIL 780
            AL  V L+VP G VFGL+G NGAGKTTL+KHILG L P+ GTVRVFGLDPV  P   L RIG+LSE RDLP WM + EL  +T+AFYP WD  YAEELR  FEL +  +V +LSRGQ ARAGLL++LA+RP LLVLDEPSSGLDP+VR+DIL AIIRT+ DEGRTVLFSSHLLDEV+RV+D VA++ QGQ++L++ +D++   H RLT+ FA P    P L GALT +G G EW  IC+G+R +L  A   L A ++
Sbjct:   27 ALNRVNLTVPRGGVFGLIGGNGAGKTTLIKHILGMLTPREGTVRVFGLDPVQHPVETLGRIGYLSEDRDLPDWMRVGELIRYTQAFYPTWDETYAEELRQAFELDVNSRVKSLSRGQRARAGLLISLAYRPDLLVLDEPSSGLDPVVRRDILSAIIRTIADEGRTVLFSSHLLDEVERVADHVAMIHQGQIILSATMDDMKEQHRRLTLRFAHPVETAPILAGALTSSGRGHEWTYICSGERSDLMVAASSLGASVI 283          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90985.21093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517QFJ3_9PLAN1.460e-17494.62ABC transporter ATP-binding protein YtrB n=7 Tax=G... [more]
A0A518IKK3_9PLAN4.090e-16589.62ABC transporter ATP-binding protein YtrB n=2 Tax=G... [more]
A0A517VM68_9PLAN8.750e-16085.38ABC transporter ATP-binding protein YtrB n=11 Tax=... [more]
A0A517WPE8_9PLAN1.140e-15785.00ABC transporter ATP-binding protein YtrB n=2 Tax=G... [more]
A0A3N5VUK0_9PLAN4.190e-11163.81ABC transporter ATP-binding protein n=1 Tax=Planct... [more]
A0A6M5YJA1_9BACT2.340e-10761.54ABC transporter, ATP-binding protein n=1 Tax=Frigo... [more]
A0A4P5XZ56_9BACT2.540e-10761.78Multidrug ABC transporter ATP-binding protein n=3 ... [more]
A0A2V5U9F8_9BACT8.300e-10762.16ABC transporter ATP-binding protein n=6 Tax=Verruc... [more]
A0A5K7X4L2_9BACT1.030e-10661.00Efflux ABC transporter n=1 Tax=Lacipirellula parvu... [more]
UPI00029B27EB1.200e-10662.26ABC transporter ATP-binding protein n=1 Tax=Schles... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90985contigM-pyrifera_M_contig90985:2..784 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score458.4
Seed ortholog evalue2.3e-126
Seed eggNOG ortholog344747.PM8797T_11666
KEGG koko:K01990
KEGG TC3.A.1
KEGG ModuleM00254
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ABC transporter
EggNOG OGs2IY79@203682,COG1131@1,COG1131@2
COG Functional cat.V
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko02000
Exons1
Model size783
Cds size783
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816822.2187276-CDS-M-pyrifera_M_contig90985:1..7841622816822.2187276-CDS-M-pyrifera_M_contig90985:1..784Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90985 2..784 +
1692278198.7124572-CDS-M-pyrifera_M_contig90985:1..7841692278198.7124572-CDS-M-pyrifera_M_contig90985:1..784Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90985 2..784 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90985.21093.1prot_M-pyrifera_M_contig90985.21093.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90985 2..784 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90985.21093.1

>prot_M-pyrifera_M_contig90985.21093.1 ID=prot_M-pyrifera_M_contig90985.21093.1|Name=mRNA_M-pyrifera_M_contig90985.21093.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=261bp
KKQALANVCLSVPEGAVFGLVGENGAGKTTLLKHILGFLKPQSGTVRVFG
LDPVADPPGVLSRIGHLSETRDLPPWMTIRELFEFTRAFYPKWDPVYAEE
LRMMFELTMTQKVSTLSRGQLARAGLLLALAHRPPLLVLDEPSSGLDPLV
RKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDQVAILDQGQLLLTSPL
DEVLVSHFRLTVSFAEPQPFFPQLTGALTWTGSGKEWDIICNGQRQELEA
ALKDLDAEILA
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mRNA from alignment at M-pyrifera_M_contig90985:2..784+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90985.21093.1 ID=mRNA_M-pyrifera_M_contig90985.21093.1|Name=mRNA_M-pyrifera_M_contig90985.21093.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig90985:2..784+ (Macrocystis pyrifera P11B4 male)
AAGAAGCAGGCCCTGGCCAACGTCTGTCTCTCCGTACCCGAAGGAGCCGT CTTCGGTCTCGTGGGCGAGAACGGCGCCGGCAAAACCACGCTGTTGAAAC ACATTCTCGGCTTCCTCAAACCGCAGTCCGGCACCGTAAGGGTCTTCGGT CTCGATCCGGTCGCCGATCCGCCGGGCGTGTTGAGTCGCATCGGACATCT CTCCGAAACCCGCGACCTGCCCCCCTGGATGACGATTCGCGAACTGTTTG AATTCACGCGGGCCTTCTATCCCAAGTGGGATCCGGTCTACGCCGAAGAG CTGCGGATGATGTTCGAACTCACGATGACGCAGAAAGTCTCCACGCTTTC CCGCGGTCAGCTGGCCCGTGCCGGGCTTCTGCTGGCGCTCGCCCATCGTC CTCCGCTCTTGGTGCTGGACGAACCATCGTCGGGCCTCGACCCTTTGGTC CGCAAAGACATTCTGGACGCCATCATCCGCACGGTCGTCGATGAAGGCCG CACCGTCCTCTTTTCTTCGCACCTGCTGGACGAAGTGCAGCGCGTTTCGG ATCAGGTCGCCATTCTCGACCAGGGCCAGCTGCTGCTCACCAGCCCGCTG GATGAAGTTCTGGTCTCGCATTTTCGACTGACGGTCAGCTTCGCCGAGCC GCAGCCCTTCTTCCCGCAACTGACCGGCGCCTTGACCTGGACCGGTTCCG GCAAGGAATGGGACATCATCTGCAACGGCCAGCGGCAGGAACTGGAAGCC GCCTTAAAAGACCTGGACGCCGAAATCCTGGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90985:2..784+

>mRNA_M-pyrifera_M_contig90985.21093.1 ID=mRNA_M-pyrifera_M_contig90985.21093.1|Name=mRNA_M-pyrifera_M_contig90985.21093.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1566bp|location=Sequence derived from alignment at M-pyrifera_M_contig90985:2..784+ (Macrocystis pyrifera P11B4 male)
AAGAAGCAGGCCCTGGCCAACGTCTGTCTCTCCGTACCCGAAGGAGCCGT
CTTCGGTCTCGTGGGCGAGAACGGCGCCGGCAAAACCACGCTGTTGAAAC
ACATTCTCGGCTTCCTCAAACCGCAGTCCGGCACCGTAAGGGTCTTCGGT
CTCGATCCGGTCGCCGATCCGCCGGGCGTGTTGAGTCGCATCGGACATCT
CTCCGAAACCCGCGACCTGCCCCCCTGGATGACGATTCGCGAACTGTTTG
AATTCACGCGGGCCTTCTATCCCAAGTGGGATCCGGTCTACGCCGAAGAG
CTGCGGATGATGTTCGAACTCACGATGACGCAGAAAGTCTCCACGCTTTC
CCGCGGTCAGCTGGCCCGTGCCGGGCTTCTGCTGGCGCTCGCCCATCGTC
CTCCGCTCTTGGTGCTGGACGAACCATCGTCGGGCCTCGACCCTTTGGTC
CGCAAAGACATTCTGGACGCCATCATCCGCACGGTCGTCGATGAAGGCCG
CACCGTCCTCTTTTCTTCGCACCTGCTGGACGAAGTGCAGCGCGTTTCGG
ATCAGGTCGCCATTCTCGACCAGGGCCAGCTGCTGCTCACCAGCCCGCTG
GATGAAGTTCTGGTCTCGCATTTTCGACTGACGGTCAGCTTCGCCGAGCC
GCAGCCCTTCTTCCCGCAACTGACCGGCGCCTTGACCTGGACCGGTTCCG
GCAAGGAATGGGACATCATCTGCAACGGCCAGCGGCAGGAACTGGAAGCC
GCCTTAAAAGACCTGGACGCCGAAATCCTGGCCAAGAAGCAGGCCCTGGC
CAACGTCTGTCTCTCCGTACCCGAAGGAGCCGTCTTCGGTCTCGTGGGCG
AGAACGGCGCCGGCAAAACCACGCTGTTGAAACACATTCTCGGCTTCCTC
AAACCGCAGTCCGGCACCGTAAGGGTCTTCGGTCTCGATCCGGTCGCCGA
TCCGCCGGGCGTGTTGAGTCGCATCGGACATCTCTCCGAAACCCGCGACC
TGCCCCCCTGGATGACGATTCGCGAACTGTTTGAATTCACGCGGGCCTTC
TATCCCAAGTGGGATCCGGTCTACGCCGAAGAGCTGCGGATGATGTTCGA
ACTCACGATGACGCAGAAAGTCTCCACGCTTTCCCGCGGTCAGCTGGCCC
GTGCCGGGCTTCTGCTGGCGCTCGCCCATCGTCCTCCGCTCTTGGTGCTG
GACGAACCATCGTCGGGCCTCGACCCTTTGGTCCGCAAAGACATTCTGGA
CGCCATCATCCGCACGGTCGTCGATGAAGGCCGCACCGTCCTCTTTTCTT
CGCACCTGCTGGACGAAGTGCAGCGCGTTTCGGATCAGGTCGCCATTCTC
GACCAGGGCCAGCTGCTGCTCACCAGCCCGCTGGATGAAGTTCTGGTCTC
GCATTTTCGACTGACGGTCAGCTTCGCCGAGCCGCAGCCCTTCTTCCCGC
AACTGACCGGCGCCTTGACCTGGACCGGTTCCGGCAAGGAATGGGACATC
ATCTGCAACGGCCAGCGGCAGGAACTGGAAGCCGCCTTAAAAGACCTGGA
CGCCGAAATCCTGGCC
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