mRNA_M-pyrifera_M_contig90976.21092.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90976.21092.1
Unique NamemRNA_M-pyrifera_M_contig90976.21092.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig90976.21092.1 vs. uniprot
Match: A0A518A8E5_9PLAN (DNA mismatch repair protein MutS n=21 Tax=Planctomycetaceae TaxID=126 RepID=A0A518A8E5_9PLAN)

HSP 1 Score: 512 bits (1318), Expect = 1.480e-174
Identity = 251/261 (96.17%), Postives = 255/261 (97.70%), Query Frame = 1 
Query:    1 GKKLTPMMERYLEVKHQNPGTLLLFRMGDFYELFYEDAEIAARILGITLTSRDKNSSNPIPMAGFPHHSLDSYLYKLIHAGYRAAICDQVEDPKKAKGMVKREVTRVITPGTLTDDALLDPHENNFLASIYFGKSDIGLAWLELSTGRFLTSNTTAEHLVDELARIHPAECIFAEGNTALQNAIGHLDTMLTERPSWTFAEDECEKLLLSHFGTKTLEGFNLEQGTPAITAAGALLEYVQETQRSAIPHINQIEPYARGDR 783
            GKKLTPMMERYLEVK QNPGTLLLFRMGDFYELF EDAEIAARILGITLTSRDK SSNPIPMAGFPHHSLDSYLYKLIHAGYRA+ICDQVEDPKKAKGMVKREVTRV+TPGTLTDDALLDPHENNFLASIYFGKSDIGLAWLELSTGRFLTSNTTAEHLVDELARIHPAECIFAEGNTALQNAIGHL+TMLTERPSW+FAEDECEK LL HFGTKTLEGFNLEQGTPAITAAGALLEYVQETQRSAIPHINQIEPY RGDR
Sbjct:    5 GKKLTPMMERYLEVKRQNPGTLLLFRMGDFYELFNEDAEIAARILGITLTSRDKTSSNPIPMAGFPHHSLDSYLYKLIHAGYRASICDQVEDPKKAKGMVKREVTRVVTPGTLTDDALLDPHENNFLASIYFGKSDIGLAWLELSTGRFLTSNTTAEHLVDELARIHPAECIFAEGNTALQNAIGHLETMLTERPSWSFAEDECEKRLLEHFGTKTLEGFNLEQGTPAITAAGALLEYVQETQRSAIPHINQIEPYERGDR 265
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BLAST of mRNA_M-pyrifera_M_contig90976.21092.1 vs. uniprot
Match: A0A836RGJ5_9PLAN (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836RGJ5_9PLAN)

HSP 1 Score: 357 bits (916), Expect = 1.740e-119
Identity = 172/260 (66.15%), Postives = 207/260 (79.62%), Query Frame = 1 
Query:    7 KLTPMMERYLEVKHQNPGTLLLFRMGDFYELFYEDAEIAARILGITLTSRDKNSSNPIPMAGFPHHSLDSYLYKLIHAGYRAAICDQVEDPKKAKGMVKREVTRVITPGTLTDDALLDPHENNFLASIYFGKSDIGLAWLELSTGRFLTSNTTAEHLVDELARIHPAECIFAEGNTA---LQNAIGHLDTMLTERPSWTFAEDECEKLLLSHFGTKTLEGFNLEQGTPAITAAGALLEYVQETQRSAIPHINQIEPYARG 777
            K TPMMERYLEVK QNPG+LLLFRMGDFYELFYEDAE+AA++LG+TLTSRDK S +PIPMAGFP+H+L+SYL KLI AGYRAAIC+QVEDPKKAKG+VKREV +++TPGTLTD+ALLDP E+NF+A +   K  +G AWLELSTGRF T +   E L DELAR+ PAEC++ E   A   L+  +     +LT RP W F+  EC++LL  HFG +TL GF LE  TPA+TAAGALL+YVQETQ+S + HI +IEPY RG
Sbjct:   11 KSTPMMERYLEVKSQNPGSLLLFRMGDFYELFYEDAEVAAKVLGLTLTSRDKGSPDPIPMAGFPYHALESYLQKLIRAGYRAAICEQVEDPKKAKGLVKREVVQIVTPGTLTDEALLDPRESNFVACVVPAKRKLGFAWLELSTGRFQTMDLEPEELADELARLRPAECLYPESQAADARLRPLLRADGPLLTPRPDWCFSTSECQRLLCDHFGVQTLAGFGLEDHTPAVTAAGALLQYVQETQKSTLTHIARIEPYQRG 270
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BLAST of mRNA_M-pyrifera_M_contig90976.21092.1 vs. uniprot
Match: A0A2E7D5R4_9PLAN (DNA mismatch repair protein MutS n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D5R4_9PLAN)

HSP 1 Score: 365 bits (938), Expect = 1.270e-117
Identity = 174/261 (66.67%), Postives = 218/261 (83.52%), Query Frame = 1 
Query:    4 KKLTPMMERYLEVKHQNPGTLLLFRMGDFYELFYEDAEIAARILGITLTSRDKNSSNPIPMAGFPHHSLDSYLYKLIHAGYRAAICDQVEDPKKAKGMVKREVTRVITPGTLTDDALLDPHENNFLASIYFGKSDIGLAWLELSTGRFLTSNTTAEHLVDELARIHPAECIFAEGNT--ALQNAIGHLDTML-TERPSWTFAEDECEKLLLSHFGTKTLEGFNLEQGTPAITAAGALLEYVQETQRSAIPHINQIEPYARG 777
            KKLTPMMERYLEVK QNPG++LLFRMGDFYELFYEDAE AA+ LG+TLTSRDK S+NPIPMAGFP+H+L+ YL KLI +G+RAAIC+QVEDPKKAKG+VKREVT+V+TPGTLTD+ALLDP E+NFLAS++     +GLAWLE+STGRF+T++  A  L DELAR+ P+ECI+AE     ++ + +G L  +L T RP W+FA D+C + LL HFGT+TLEGF+L+  +P ITAAGALLEY QETQ+S++ HI ++EPY +G
Sbjct:    8 KKLTPMMERYLEVKRQNPGSILLFRMGDFYELFYEDAETAAKALGLTLTSRDKGSTNPIPMAGFPYHALEGYLQKLIRSGFRAAICEQVEDPKKAKGLVKREVTQVVTPGTLTDEALLDPRESNFLASVFADADRVGLAWLEISTGRFITTDVDASLLADELARLRPSECIYAENQADESVLDVLGRLKELLPTGRPDWSFARDQCLQQLLDHFGTRTLEGFDLDATSPGITAAGALLEYAQETQKSSLTHIERLEPYRQG 268
[Close]
BLAST of mRNA_M-pyrifera_M_contig90976.21092.1 vs. uniprot
Match: A0A517ZZ01_9PLAN (DNA mismatch repair protein MutS n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZZ01_9PLAN)

HSP 1 Score: 348 bits (894), Expect = 4.810e-111
Identity = 166/261 (63.60%), Postives = 213/261 (81.61%), Query Frame = 1 
Query:    4 KKLTPMMERYLEVKHQNPGTLLLFRMGDFYELFYEDAEIAARILGITLTSRDKNSSNPIPMAGFPHHSLDSYLYKLIHAGYRAAICDQVEDPKKAKGMVKREVTRVITPGTLTDDALLDPHENNFLASIYFGKSDIGLAWLELSTGRFLTSNTTAEHLVDELARIHPAECIFAEGNTA--LQNAIGHLDTMLT-ERPSWTFAEDECEKLLLSHFGTKTLEGFNLEQGTPAITAAGALLEYVQETQRSAIPHINQIEPYARG 777
            KKLTPMM+RYLEVK + P +LLLFRMGDFYELFYEDAE AAR+L +TLTSRDK+S+NP+PMAGFP+H+LD YL+KLI AG+RA++C+QVEDPK+AKG+V+REVTRV+TPGTLT+DALLDP ++NFLA+I+  K+ +G+AWLELSTGRF+T++    HL DELAR+ P+EC+   G     L+  +   D ML  ERP W+FA D   + LL HFGT TLEGF+++  +P + AAGALLEYVQETQ+S++ HI ++EPY RG
Sbjct:   14 KKLTPMMQRYLEVKAEYPDSLLLFRMGDFYELFYEDAESAARVLNLTLTSRDKSSANPVPMAGFPYHALDGYLHKLIQAGFRASVCEQVEDPKQAKGLVRREVTRVVTPGTLTEDALLDPRQHNFLATIFPTKTAVGIAWLELSTGRFVTADLAPAHLGDELARLQPSECLVPSGQRPDWLEETLSFADGMLIGERPPWSFAADNAGQTLLKHFGTTTLEGFDVDITSPGVAAAGALLEYVQETQKSSLDHITRLEPYRRG 274
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BLAST of mRNA_M-pyrifera_M_contig90976.21092.1 vs. uniprot
Match: UPI00199098BE (DNA mismatch repair protein MutS n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI00199098BE)

HSP 1 Score: 332 bits (851), Expect = 1.890e-110
Identity = 158/258 (61.24%), Postives = 205/258 (79.46%), Query Frame = 1 
Query:   13 TPMMERYLEVKHQNPGTLLLFRMGDFYELFYEDAEIAARILGITLTSRDKNSSNPIPMAGFPHHSLDSYLYKLIHAGYRAAICDQVEDPKKAKGMVKREVTRVITPGTLTDDALLDPHENNFLASIYFGKSDIGLAWLELSTGRFLTSNTTAEHLVDELARIHPAECIF---AEGNTALQNAIGHLDTMLTERPSWTFAEDECEKLLLSHFGTKTLEGFNLEQGTPAITAAGALLEYVQETQRSAIPHINQIEPYARG 777
            +P M+RYLEVK Q+P  +LLFRMGDFYELFYEDA  A++ +G+TLTSRDK S+NPIPMAGFP+H LDSYL KL+ AG+RAAIC+Q+EDPK AKG+VKREVTRV+TPGTLT+D+LLDP E+NFLA ++  K   GLAWLE+STGRF T++   E + DE+ARI PAEC+    A+ +  +Q         L+ERP W+FA D+C++LLL  F T+TL GF++++ TP ITAAGALL+YV+ETQ+S++ HI ++EPY RG
Sbjct:    9 SPAMQRYLEVKAQHPQAILLFRMGDFYELFYEDAVTASKAVGLTLTSRDKGSTNPIPMAGFPYHQLDSYLQKLVRAGFRAAICEQMEDPKLAKGLVKREVTRVVTPGTLTEDSLLDPRESNFLACVFPTKEACGLAWLEVSTGRFFTTDLADEAVADEIARIQPAECLVPEQAKNSGVVQMLTRTSGLFLSERPPWSFAADQCKRLLLEQFQTRTLAGFDIDEDTPGITAAGALLDYVRETQKSSLGHITRLEPYRRG 266
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BLAST of mRNA_M-pyrifera_M_contig90976.21092.1 vs. uniprot
Match: A0A5C9C184_9BACT (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A5C9C184_9BACT)

HSP 1 Score: 330 bits (845), Expect = 3.280e-110
Identity = 158/262 (60.31%), Postives = 204/262 (77.86%), Query Frame = 1 
Query:    4 KKLTPMMERYLEVKHQNPGTLLLFRMGDFYELFYEDAEIAARILGITLTSRDKNSSNPIPMAGFPHHSLDSYLYKLIHAGYRAAICDQVEDPKKAKGMVKREVTRVITPGTLTDDALLDPHENNFLASIYFGKSDI-GLAWLELSTGRFLTSNTTAEHLVDELARIHPAECIFAE---GNTALQNAIGHLDTMLTERPSWTFAEDECEKLLLSHFGTKTLEGFNLEQGTPAITAAGALLEYVQETQRSAIPHINQIEPYARG 777
            + LTP MERYLEVK QNPG++LLFRMGDFYELF+EDA +++++LG+TLTSRDK S NPIPMAGFP+H+L+ YL KLI AG+R A+C+Q+EDPK AKGMVKREVT+V+TPGTLTD+ALLDP E+NFLAS++  +S + GLAWLE+STGRF+T++     L DELARI PAECI  E    +  L+  +     + T R  W +AE+ C   L  HFGT TL+GF+++  +  +TAAGALLEYVQE Q+S++ HI ++EPY RG
Sbjct:   16 RNLTPAMERYLEVKRQNPGSILLFRMGDFYELFFEDAVVSSKVLGLTLTSRDKGSPNPIPMAGFPYHALEGYLRKLITAGHRVAVCEQMEDPKLAKGMVKREVTQVVTPGTLTDEALLDPRESNFLASVWPSRSGVVGLAWLEVSTGRFVTTDLDPAQLADELARIRPAECIHPEHLANDERLRPVLARTGLLATPRAPWCWAEEACRSALFKHFGTTTLDGFDIDGDSAGVTAAGALLEYVQEMQKSSLAHIARLEPYRRG 277
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BLAST of mRNA_M-pyrifera_M_contig90976.21092.1 vs. uniprot
Match: A0A3L7RIY3_9BACT (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7RIY3_9BACT)

HSP 1 Score: 335 bits (860), Expect = 5.600e-110
Identity = 169/264 (64.02%), Postives = 209/264 (79.17%), Query Frame = 1 
Query:    7 KLTPMMERYLEVKHQNPGTLLLFRMGDFYELFYEDAEIAARILGITLTSRDKNSSNPIPMAGFPHHSLDSYLYKLIHAGYRAAICDQVEDPKKAKGMVKREVTRVITPGTLTDDALLDPHENNFLASIYFGKSDIGLAWLELSTGRFLTSNTTAEHLVDELARIHPAECIFAEGNTALQNAIGHL--------DTMLTERPSWTFAEDECEKLLLSHFGTKTLEGFNLEQGTPAITAAGALLEYVQETQRSAIPHINQIEPYAR 774
            KL+PMMERY  VK ++PG +LLFRMGDFYELFYEDA+ A+R+LG+TLTSRDK+S NP+PMAGFP+H LD YL KLI AG+RAAICDQVEDPKKAKG+V+REVTRV+TPGTLTDD +LDP ++NFLA +   K+ IGLAWLE+STGRFL ++     L DELARI PAEC+  E  +A Q+  G L          ++T RP W FA +E ++LL  HFGTKTLEGF++E  TPA+TAAGALLEYV+ETQR+A+PHI ++E + R
Sbjct:    4 KLSPMMERYKVVKAEHPGAILLFRMGDFYELFYEDAQNASRVLGLTLTSRDKSSENPVPMAGFPYHQLDGYLQKLIQAGFRAAICDQVEDPKKAKGLVRREVTRVVTPGTLTDDQMLDPRQSNFLACVAPSKNMIGLAWLEVSTGRFLLTDVEPSQLQDELARIRPAECLIPE--SAAQD--GQLPMRRPDPGSAVMTTRPDWCFAREEAKRLLNEHFGTKTLEGFDVED-TPAVTAAGALLEYVRETQRTALPHIVRMEFWRR 262
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BLAST of mRNA_M-pyrifera_M_contig90976.21092.1 vs. uniprot
Match: A0A3L7ULM4_9BACT (DNA mismatch repair protein MutS n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A3L7ULM4_9BACT)

HSP 1 Score: 345 bits (886), Expect = 7.180e-110
Identity = 172/261 (65.90%), Postives = 209/261 (80.08%), Query Frame = 1 
Query:    7 KLTPMMERYLEVKHQNPGTLLLFRMGDFYELFYEDAEIAARILGITLTSRDKNSSNPIPMAGFPHHSLDSYLYKLIHAGYRAAICDQVEDPKKAKGMVKREVTRVITPGTLTDDALLDPHENNFLASIYFGKSDIGLAWLELSTGRFLTSNTTAEHLVDELARIHPAECIFAEGNTALQNAIGHLDT-----MLTERPSWTFAEDECEKLLLSHFGTKTLEGFNLEQGTPAITAAGALLEYVQETQRSAIPHINQIEPYAR 774
            KL+PMMERY+EVK QNPGT+LLFRMGDFYELF+EDA+ AA++LG+TLTSRDK S NP PMAGFP+H LD+YL KLI AG+RAAICDQVEDPKKAKG+V+REVTRV+TPGTLTDD LLDP ++NFLA +   K+ IGLAWLELSTGRFL +      L DELARI+PAEC+  E + A +N +    T     +LT RP W F  DE  +LL  HFGTKTLEGF+++  +PA+TAAGALL+YV+ETQR+A+PHI +IE + R
Sbjct:    3 KLSPMMERYMEVKGQNPGTILLFRMGDFYELFFEDAQNAAKVLGLTLTSRDKASDNPTPMAGFPYHQLDAYLQKLIRAGFRAAICDQVEDPKKAKGLVRREVTRVVTPGTLTDDELLDPRQSNFLACVAPAKASIGLAWLELSTGRFLLTELEPSQLQDELARINPAECLIPE-SAAKENNLAMRRTEQQSLVLTTRPDWCFGRDEARRLLNEHFGTKTLEGFDIDD-SPAVTAAGALLDYVRETQRTALPHIVRIEAWRR 261
[Close]
BLAST of mRNA_M-pyrifera_M_contig90976.21092.1 vs. uniprot
Match: A0A7C2JYP9_9PLAN (DNA mismatch repair protein MutS n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2JYP9_9PLAN)

HSP 1 Score: 343 bits (881), Expect = 3.250e-109
Identity = 162/257 (63.04%), Postives = 209/257 (81.32%), Query Frame = 1 
Query:   13 TPMMERYLEVKHQNPGTLLLFRMGDFYELFYEDAEIAARILGITLTSRDKNSSNPIPMAGFPHHSLDSYLYKLIHAGYRAAICDQVEDPKKAKGMVKREVTRVITPGTLTDDALLDPHENNFLASIYFGKSDIGLAWLELSTGRFLTSNTTAEHLVDELARIHPAECIFAEGNTALQNAIGHLDTML--TERPSWTFAEDECEKLLLSHFGTKTLEGFNLEQGTPAITAAGALLEYVQETQRSAIPHINQIEPYARG 777
            TPMM+RYLEVK QNPG LLLFRMGDFYELFYEDA+ AA++LG+TLTSRDK S NP+PMAGFP+H+L+ YL KL+ AG+RAAIC+QVEDPK AKG+VKREVT+V+TPGTLTDDALLDP ++NFLA ++  K   G AWLELSTGRF T++ + +HL DELARI PAEC++ EG +   + +G LD  +  +ERP+W+F+ D+C +LLL  F  +TL+GF++   +P + AAGALL+YV+ETQ+S + HI ++EPY RG
Sbjct:    9 TPMMQRYLEVKAQNPGALLLFRMGDFYELFYEDAQTAAKVLGLTLTSRDKGSPNPVPMAGFPYHALNGYLQKLVRAGHRAAICEQVEDPKLAKGLVKREVTQVVTPGTLTDDALLDPRQSNFLACVFPAKEACGFAWLELSTGRFWTTDVSPQHLADELARIQPAECLYPEGQS---HHLGALDGRIAFSERPAWSFSRDQCLRLLLEQFRVQTLDGFDILADSPGVIAAGALLDYVRETQKSDLAHITRLEPYRRG 262
[Close]
BLAST of mRNA_M-pyrifera_M_contig90976.21092.1 vs. uniprot
Match: A0A5C5X6M7_9PLAN (DNA mismatch repair protein MutS n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X6M7_9PLAN)

HSP 1 Score: 343 bits (880), Expect = 9.300e-109
Identity = 168/273 (61.54%), Postives = 216/273 (79.12%), Query Frame = 1 
Query:    7 KLTPMMERYLEVKHQNPGTLLLFRMGDFYELFYEDAEIAARILGITLTSRDKNSSNPIPMAGFPHHSLDSYLYKLIHAGYRAAICDQVEDPKKAKGMVKREVTRVITPGTLTDDALLDPHENNFLASIYFGKSDIGLAWLELSTGRFLTSNTTAEH------------LVDELARIHPAECIFAEG---NTALQNAIGHLDTMLTERPSWTFAEDECEKLLLSHFGTKTLEGFNL-EQGTPAITAAGALLEYVQETQRSAIPHINQIEPYARG 777
            KLTPMM+RY+EVK + PGT+LLFRMGDFYELF++DAEIAA+ILG+TLTSRDK+SS P+PMAGFP+HSL+ YL KLI AG++ +ICDQVEDPK AKG+V+REVT+++TPGTLTDDALLDP E+N+LAS+      IGLAWLELSTGRF     + E+            L+DE+ARIHPAEC+  E    +   +  I +  T+LTERP+W+FA ++C ++LL HFGT TLEGF+L E+ +  ITAAGALLEYVQETQ+S++ H++++EPY RG
Sbjct:    8 KLTPMMQRYMEVKSETPGTILLFRMGDFYELFHDDAEIAAKILGLTLTSRDKSSSKPVPMAGFPYHSLEGYLQKLIAAGHKVSICDQVEDPKAAKGLVRREVTQIVTPGTLTDDALLDPKESNYLASVCPTNDSIGLAWLELSTGRFYCMEVSRENGELPPQLGSSSALIDEVARIHPAECLVPENCKNDETHKQLIEYGQTVLTERPTWSFAANQCREILLKHFGTATLEGFDLTEEDSAGITAAGALLEYVQETQKSSLGHLSRLEPYRRG 280
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90976.21092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518A8E5_9PLAN1.480e-17496.17DNA mismatch repair protein MutS n=21 Tax=Planctom... [more]
A0A836RGJ5_9PLAN1.740e-11966.15DNA mismatch repair protein MutS (Fragment) n=1 Ta... [more]
A0A2E7D5R4_9PLAN1.270e-11766.67DNA mismatch repair protein MutS n=1 Tax=Planctomy... [more]
A0A517ZZ01_9PLAN4.810e-11163.60DNA mismatch repair protein MutS n=3 Tax=Symmachie... [more]
UPI00199098BE1.890e-11061.24DNA mismatch repair protein MutS n=1 Tax=Candidatu... [more]
A0A5C9C184_9BACT3.280e-11060.31DNA mismatch repair protein MutS (Fragment) n=1 Ta... [more]
A0A3L7RIY3_9BACT5.600e-11064.02DNA mismatch repair protein MutS (Fragment) n=1 Ta... [more]
A0A3L7ULM4_9BACT7.180e-11065.90DNA mismatch repair protein MutS n=2 Tax=Planctomy... [more]
A0A7C2JYP9_9PLAN3.250e-10963.04DNA mismatch repair protein MutS n=1 Tax=Schlesner... [more]
A0A5C5X6M7_9PLAN9.300e-10961.54DNA mismatch repair protein MutS n=1 Tax=Thalassog... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90976contigM-pyrifera_M_contig90976:3..785 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score485.3
Seed ortholog evalue1.7e-134
Seed eggNOG ortholog344747.PM8797T_26260
Preferred namemutS
KEGG koko:K03555
KEGG Pathwayko03430,map03430
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008301,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030554,GO:0030983,GO:0031323,GO:0032136,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391
EggNOG free text desc.that it carries out the mismatch recognition step. This protein has a weak ATPase activity
EggNOG OGs2IXGV@203682,COG0249@1,COG0249@2
COG Functional cat.L
BiGG ReactioniECW_1372.ECW_m2935,iWFL_1372.ECW_m2935
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400
Exons1
Model size783
Cds size765
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816822.1558325-UTR-M-pyrifera_M_contig90976:2..201622816822.1558325-UTR-M-pyrifera_M_contig90976:2..20Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90976 3..20 +
1692278198.6747231-UTR-M-pyrifera_M_contig90976:2..201692278198.6747231-UTR-M-pyrifera_M_contig90976:2..20Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90976 3..20 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816822.1746104-CDS-M-pyrifera_M_contig90976:20..7851622816822.1746104-CDS-M-pyrifera_M_contig90976:20..785Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90976 21..785 +
1692278198.6903732-CDS-M-pyrifera_M_contig90976:20..7851692278198.6903732-CDS-M-pyrifera_M_contig90976:20..785Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90976 21..785 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90976.21092.1prot_M-pyrifera_M_contig90976.21092.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90976 21..785 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90976.21092.1

>prot_M-pyrifera_M_contig90976.21092.1 ID=prot_M-pyrifera_M_contig90976.21092.1|Name=mRNA_M-pyrifera_M_contig90976.21092.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=255bp
MMERYLEVKHQNPGTLLLFRMGDFYELFYEDAEIAARILGITLTSRDKNS
SNPIPMAGFPHHSLDSYLYKLIHAGYRAAICDQVEDPKKAKGMVKREVTR
VITPGTLTDDALLDPHENNFLASIYFGKSDIGLAWLELSTGRFLTSNTTA
EHLVDELARIHPAECIFAEGNTALQNAIGHLDTMLTERPSWTFAEDECEK
LLLSHFGTKTLEGFNLEQGTPAITAAGALLEYVQETQRSAIPHINQIEPY
ARGDR
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mRNA from alignment at M-pyrifera_M_contig90976:3..785+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90976.21092.1 ID=mRNA_M-pyrifera_M_contig90976.21092.1|Name=mRNA_M-pyrifera_M_contig90976.21092.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig90976:3..785+ (Macrocystis pyrifera P11B4 male)
GGCAAGAAGCTGACCCCGATGATGGAGCGGTATCTGGAAGTCAAACACCA
GAATCCGGGAACACTGTTATTGTTTCGGATGGGAGACTTCTATGAGCTGT
TTTACGAAGACGCGGAAATCGCAGCCCGCATTCTGGGAATCACACTCACC
AGTCGAGATAAAAATTCCAGCAACCCGATCCCCATGGCCGGGTTCCCTCA
TCACTCGCTGGACAGCTATCTCTACAAGCTGATTCATGCCGGCTACCGGG
CCGCCATCTGCGATCAGGTAGAAGATCCCAAAAAAGCGAAAGGGATGGTC
AAACGCGAAGTCACCCGGGTGATTACACCGGGAACTCTAACGGATGACGC
CCTGCTCGACCCGCATGAAAACAACTTTCTGGCCAGTATCTATTTCGGAA
AAAGTGATATCGGCCTGGCCTGGCTGGAACTTTCGACCGGGCGTTTCCTC
ACGTCCAATACGACGGCAGAACATCTGGTCGATGAACTGGCGCGGATCCA
TCCTGCTGAGTGTATCTTTGCCGAGGGGAACACAGCACTTCAGAACGCCA
TCGGTCATCTGGATACGATGTTGACAGAACGCCCTTCCTGGACGTTTGCA
GAAGATGAATGCGAAAAGCTCCTGCTCTCACATTTCGGTACCAAAACCCT
CGAAGGCTTCAACCTGGAACAGGGAACGCCCGCCATTACTGCTGCCGGTG
CCCTGCTGGAATACGTTCAGGAAACTCAGCGAAGTGCCATTCCGCATATC
AACCAGATCGAACCTTACGCACGGGGCGATCGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90976:3..785+

>mRNA_M-pyrifera_M_contig90976.21092.1 ID=mRNA_M-pyrifera_M_contig90976.21092.1|Name=mRNA_M-pyrifera_M_contig90976.21092.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1530bp|location=Sequence derived from alignment at M-pyrifera_M_contig90976:3..785+ (Macrocystis pyrifera P11B4 male)
ATGATGGAGCGGTATCTGGAAGTCAAACACCAGAATCCGGGAACACTGTT
ATTGTTTCGGATGGGAGACTTCTATGAGCTGTTTTACGAAGACGCGGAAA
TCGCAGCCCGCATTCTGGGAATCACACTCACCAGTCGAGATAAAAATTCC
AGCAACCCGATCCCCATGGCCGGGTTCCCTCATCACTCGCTGGACAGCTA
TCTCTACAAGCTGATTCATGCCGGCTACCGGGCCGCCATCTGCGATCAGG
TAGAAGATCCCAAAAAAGCGAAAGGGATGGTCAAACGCGAAGTCACCCGG
GTGATTACACCGGGAACTCTAACGGATGACGCCCTGCTCGACCCGCATGA
AAACAACTTTCTGGCCAGTATCTATTTCGGAAAAAGTGATATCGGCCTGG
CCTGGCTGGAACTTTCGACCGGGCGTTTCCTCACGTCCAATACGACGGCA
GAACATCTGGTCGATGAACTGGCGCGGATCCATCCTGCTGAGTGTATCTT
TGCCGAGGGGAACACAGCACTTCAGAACGCCATCGGTCATCTGGATACGA
TGTTGACAGAACGCCCTTCCTGGACGTTTGCAGAAGATGAATGCGAAAAG
CTCCTGCTCTCACATTTCGGTACCAAAACCCTCGAAGGCTTCAACCTGGA
ACAGGGAACGCCCGCCATTACTGCTGCCGGTGCCCTGCTGGAATACGTTC
AGGAAACTCAGCGAAGTGCCATTCCGCATATCAACCAGATCGAACCTTAC
GCACGGGGCGATCGTATGATGGAGCGGTATCTGGAAGTCAAACACCAGAA
TCCGGGAACACTGTTATTGTTTCGGATGGGAGACTTCTATGAGCTGTTTT
ACGAAGACGCGGAAATCGCAGCCCGCATTCTGGGAATCACACTCACCAGT
CGAGATAAAAATTCCAGCAACCCGATCCCCATGGCCGGGTTCCCTCATCA
CTCGCTGGACAGCTATCTCTACAAGCTGATTCATGCCGGCTACCGGGCCG
CCATCTGCGATCAGGTAGAAGATCCCAAAAAAGCGAAAGGGATGGTCAAA
CGCGAAGTCACCCGGGTGATTACACCGGGAACTCTAACGGATGACGCCCT
GCTCGACCCGCATGAAAACAACTTTCTGGCCAGTATCTATTTCGGAAAAA
GTGATATCGGCCTGGCCTGGCTGGAACTTTCGACCGGGCGTTTCCTCACG
TCCAATACGACGGCAGAACATCTGGTCGATGAACTGGCGCGGATCCATCC
TGCTGAGTGTATCTTTGCCGAGGGGAACACAGCACTTCAGAACGCCATCG
GTCATCTGGATACGATGTTGACAGAACGCCCTTCCTGGACGTTTGCAGAA
GATGAATGCGAAAAGCTCCTGCTCTCACATTTCGGTACCAAAACCCTCGA
AGGCTTCAACCTGGAACAGGGAACGCCCGCCATTACTGCTGCCGGTGCCC
TGCTGGAATACGTTCAGGAAACTCAGCGAAGTGCCATTCCGCATATCAAC
CAGATCGAACCTTACGCACGGGGCGATCGT
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