mRNA_M-pyrifera_M_contig90965.21086.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90965.21086.1
Unique NamemRNA_M-pyrifera_M_contig90965.21086.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90965.21086.1 vs. uniprot
Match: A0A6G0A2M1_9ACTN (Glycosyltransferase family 1 protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A2M1_9ACTN)

HSP 1 Score: 231 bits (588), Expect = 5.490e-71
Identity = 123/250 (49.20%), Postives = 161/250 (64.40%), Query Frame = 1
Query:    1 GFEAPERVSGPVDLVHATAPMSPPVRRAPLVATLHDLFPILEPANLTPRGVRMMSRAIELMQRDATIVMCSSQQTLDDCIDAGFDPERLRFVPLGADPAVVTDADRESVAERHRLDSPYLLWAGTAEPRKNLPLLIEAYRNAAPEGLELLLVGPDGWGPEVASII-DDTPGIRHLGFVPTADLPVLMDGAEALVFPSRREGFGLPAVEAMAQGTPVVGAAGTAIAEIVGDTGPLLDPTAVDEWSDAIRTI 747
            G+   E  +G VD+VHATA + PP R A LV T+HDLFP+  P   T RG R+M R   L +R A +V+CSS+ T+ DC++AGF  ERLR VPLG + AV  D +   V   + L  PY+LWAGT EPRKNLP L+E++R      L+L+LVG  GW  ++   I D +  +R +GFVP+ DL  L  GAE    PS REGFGLP +EAMAQGTPVV + GTA  E+VGD G +++P    E +DA+  +
Sbjct:   79 GWPPVELAAGAVDIVHATAMILPPRRSAALVLTVHDLFPLEFPDQFTRRGARVMRRGAALARRRADLVLCSSRATMRDCVEAGFAEERLRLVPLGVESAVAGDDEVARVKASYGLGRPYVLWAGTVEPRKNLPTLLESFRKLGRADLDLVLVGQFGWREDLDRHIGDQSDRVRRVGFVPSRDLAALYRGAEVFCLPSLREGFGLPLLEAMAQGTPVVTSRGTATEEVVGDAGMVVEPLDASEIADALAAL 328          
BLAST of mRNA_M-pyrifera_M_contig90965.21086.1 vs. uniprot
Match: A0A7X6P205_9ACTN (Glycosyltransferase family 4 protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6P205_9ACTN)

HSP 1 Score: 223 bits (569), Expect = 4.800e-68
Identity = 121/257 (47.08%), Postives = 161/257 (62.65%), Query Frame = 1
Query:   10 APERVSGPVDLVHATAPMSPPVRRAPLVATLHDLFPILEPANLTPRGVRMMSRAIELMQRDATIVMCSSQQTLDDCIDAGFDPERLRFVPLGADPAVVTDADRESVAERHRLDSPYLLWAGTAEPRKNLPLLIEAYRNAAPEG-LELLLVGPDGWGPEVASIIDDT-PGIRHLGFVPTADLPVLMDGAEALVFPSRREGFGLPAVEAMAQGTPVVGAAGTAIAEIVGDTGPLLDPTA-----VDEWSDAIRTIATSP 759
            +P R+   VD+VHAT  M P   +A LV T+HDLFP+  P   TPRGVR+M++ IE  ++ A +V+  S+ T  DC++AGF  +RLR +P G    + T  +R S+   H L+ P++LW GT EPRKNLPLLI+AY      G ++L+LVGP GW  E+ + ID     +R LGFV   DL  L   AE +  PS REGFGLPA+E MAQGTPV+  AGTA+AE+VG  G L  P A     V+ W+DA+  +   P
Sbjct:   83 SPSRLVKNVDIVHATTTMVPSAGKAKLVVTVHDLFPLHSPEQFTPRGVRLMTKGIEKARKRADLVIVPSEDTARDCVEAGFAADRLRVIPWGTSHRMATADERASMRAAHGLERPFILWVGTVEPRKNLPLLIDAYTALPSRGEIDLVLVGPSGWDAELVARIDALGDSVRRLGFVSPTDLTALYAEAELVAVPSTREGFGLPALEGMAQGTPVLAGAGTAVAEVVG-AGGLALPVAPGGDSVEAWTDALARVLADP 338          
BLAST of mRNA_M-pyrifera_M_contig90965.21086.1 vs. uniprot
Match: UPI0020170E18 (glycosyltransferase family 4 protein n=2 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI0020170E18)

HSP 1 Score: 224 bits (570), Expect = 1.710e-67
Identity = 121/252 (48.02%), Postives = 163/252 (64.68%), Query Frame = 1
Query:   16 ERVSGPVDLVHATAPMSPPVRRAPLVATLHDLFPILEPANLTPRGVRMMSRAIELMQRDATIVMCSSQQTLDDCIDAGFDPERLRFVPLGADPAVVTDADRESVAERHRLDSPYLLWAGTAEPRKNLPLLIEAYRNAAPEGLELLLVGPDGWG----PEVASIIDDTPGIRHLGFVPTADLPVLMDGAEALVFPSRREGFGLPAVEAMAQGTPVVGAAGTAIAEIVGDTGPLLDPTAVDEWSDAIRTIATSP 759
            +R +GPVD++HAT  M+ P   APLV T+HDL    +P+  T RGV    RAI+L +RDAT+VM  S+ TLD+C   GFDP+RLR VP G +P  V  ++ E+   RH L+  Y+LWAGT EPRKNLP+L++A+   A   + L+L GP GW     P +A++ +    +R +GF+   DL     GA+   FPSR+EGFGLP +EAMAQGTPVV +AGTA AE+ G+TG L+DP  V    DA+  +   P
Sbjct:  145 QRATGPVDVIHATG-MAVPPPSAPLVVTVHDLAFTHDPSQFTRRGVAFFRRAIDLARRDATLVMAPSRATLDECRAQGFDPDRLRLVPWGIEPRPVAGSEVEAFRARHGLEGRYVLWAGTIEPRKNLPVLLDAFAALARRDVTLVLAGPQGWNEDLTPRLAALGER---VRPVGFLTQDDLRAAYAGADVFCFPSRQEGFGLPVLEAMAQGTPVVTSAGTATAEVAGETGVLVDPEDVGGLGDALGGLLDDP 392          
BLAST of mRNA_M-pyrifera_M_contig90965.21086.1 vs. uniprot
Match: UPI001AA042C8 (glycosyltransferase family 4 protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA042C8)

HSP 1 Score: 216 bits (550), Expect = 3.050e-65
Identity = 117/252 (46.43%), Postives = 159/252 (63.10%), Query Frame = 1
Query:    4 FEAPERVSGPVDLVHATAPMSPPVRRAPLVATLHDLFPILEPANLTPRGVRMMSRAIELMQRDATIVMCSSQQTLDDCIDAGFDPERLRFVPLGADPAVVTDADRESVAERHRLDSPYLLWAGTAEPRKNLPLLIEAYRNAAPEGLELLLVGPDGWGPEVASIIDDTPGIRH----LGFVPTADLPVLMDGAEALVFPSRREGFGLPAVEAMAQGTPVVGAAGTAIAEIVGDTGPLLDPTAVDEWSDAIRTI 747
            + A +  +GPVD++HAT  M+ P R APLV T+HDL  + +P ++T  G+R   RAI+L +R+A +V+  SQ T+DDC+  GFDP RLR VP G      + +         R++ PY+LW GT EPRKNLP+L+EA+     +G+EL+L GP GW  ++  +I   P +R     LGFVP  DL  L  GA     PS REGFGLP +EAMAQGTPVV +AGTA  E+VGD G ++DP  V+  + A+  I
Sbjct:   81 WPAVQLATGPVDVIHATG-MAVPPRSAPLVVTVHDLGFLHQPGHVTKHGLRFFRRAIDLARREADLVIAPSQATIDDCVAHGFDPTRLRLVPWGIRIEAASASAVGQALTARRIERPYVLWTGTVEPRKNLPVLLEAFGRLEDDGVELVLAGPAGWNEDLERLIG--PSLRDRVHVLGFVPPPDLRALYAGARLFCLPSIREGFGLPVLEAMAQGTPVVTSAGTATEEVVGDAGLVVDPADVEGLAHAMERI 329          
BLAST of mRNA_M-pyrifera_M_contig90965.21086.1 vs. uniprot
Match: A0A359F3B2_9ACTN (Glycosyltransferase family 1 protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F3B2_9ACTN)

HSP 1 Score: 215 bits (548), Expect = 6.440e-65
Identity = 115/246 (46.75%), Postives = 154/246 (62.60%), Query Frame = 1
Query:   13 PERVSGPVDLVHATAPMSPPVRRAPLVATLHDLFPILEPANLTPRGVRMMSRAIELMQRDATIVMCSSQQTLDDCIDAGFDPERLRFVPLGADPAVVTDADRESVAERHRLDSPYLLWAGTAEPRKNLPLLIEAYRNAAPEGLELLLVGPDGWGPEVASIIDDTPG-IRHLGFVPTADLPVLMDGAEALVFPSRREGFGLPAVEAMAQGTPVVGAAGTAIAEIVGDTGPLLDPTAVDEWSDAIRTI 747
            P R    +D+VHAT    P  R + LV TLHDLFP+  P   T RGVR+M+  I   +  A IV C S  T+DDC+ AGF PE+LR VP G     V+     +V + + LD PY+LW GT EPRKNLPLL++A+    P  ++L+LVGP GW  ++   ID     +R LGFVP+  L  L  GAE L  PS REGFGLPA+EAMA  TPV+  A TA++E++G+ G  ++  +V EW+D ++T+
Sbjct:   84 PTRNLPDIDVVHATTATVPNPRDSALVVTLHDLFPLTTPEQFTKRGVRIMTTGISRARELAQIVCCPSSDTIDDCLQAGFAPEQLREVPWGVTVDPVSAERVATVRQHYGLDRPYVLWVGTIEPRKNLPLLLDAFAAIQPMEVDLVLVGPVGWHEQLEGHIDRIGSQVRQLGFVPSEHLSALYSGAEVLALPSLREGFGLPALEAMAHSTPVLCQARTAVSEVMGEGGIGMESPSVQEWADGLKTL 329          
BLAST of mRNA_M-pyrifera_M_contig90965.21086.1 vs. uniprot
Match: UPI001C62D4A6 (glycosyltransferase family 4 protein n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C62D4A6)

HSP 1 Score: 214 bits (545), Expect = 1.860e-64
Identity = 117/249 (46.99%), Postives = 157/249 (63.05%), Query Frame = 1
Query:   16 ERVSGPVDLVHATAPMSPPVRRAPLVATLHDLFPILEPANLTPRGVRMMSRAIELMQRDATIVMCSSQQTLDDCIDAGFDPERLRFVPLGADPAVVTDADRESVAERHRLDSPYLLWAGTAEPRKNLPLLIEAYRNAAPEGLELLLVGPDGWGPEVASIIDDTPG-IRHLGFVPTADLPVLMDGAEALVFPSRREGFGLPAVEAMAQGTPVVGAAGTAIAEIVGDTGPLLDPTAVDEWSDAIRTIATSP 759
            ER +GPVDLVHATA ++ P  RAPLV T+HDL  + EP + T  G+R   R  EL +R A +V+  S+ T ++C  AGFDP R+R VP G D       D   V   + LD PY+L+ GT EPRKNLP L+EA      + +EL+LVG +GW  ++A+++D  PG  R LGF+PT  L  L  GA A+ +PS REGFGLP +EAMAQG  VV ++GTA  E+ GD   L+DP +VD  +  +  + + P
Sbjct:   89 ERATGPVDLVHATA-VAVPGSRAPLVVTVHDLAFLAEPDHATRHGLRFFRRGTELARRHARLVLVPSEATAEECRRAGFDPGRIRIVPWGVDATPAGAEDVTRVRAAYGLDRPYVLFVGTVEPRKNLPRLVEAMAALGRDDVELVLVGAEGWNEDLAALLDALPGRSRTLGFLPTGSLGPLYAGAAAVAYPSIREGFGLPVLEAMAQGAAVVTSSGTATEEVAGDAAVLVDPRSVDAIAAGLDRVLSDP 336          
BLAST of mRNA_M-pyrifera_M_contig90965.21086.1 vs. uniprot
Match: R4YVV6_9ACTN (Putative Glycosyl transferase, group 1 n=2 Tax=Candidatus Microthrix parvicella TaxID=41950 RepID=R4YVV6_9ACTN)

HSP 1 Score: 214 bits (544), Expect = 2.860e-64
Identity = 118/244 (48.36%), Postives = 151/244 (61.89%), Query Frame = 1
Query:   28 GPVDLVHATAPMSPPVRRAPLVATLHDLFPILEPANLTPRGVRMMSRAIELMQRDATIVMCSSQQTLDDCIDAGFDPERLRFVPLGADPAVVTDADRESVAERHRLDSPYLLWAGTAEPRKNLPLLIEAYRNAAPEGLELLLVGPDGWGPEVASIIDDTPGIRHLGFVPTADLPVLMDGAEALVFPSRREGFGLPAVEAMAQGTPVVGAAGTAIAEIVGDTGPLLDPTAVDEWSDAIRTIATSP 759
            GPVDLVH  AP+ P   R PLVATLHD+FP+  P + + RGV +MSR +    R A +V CSS+ T  D +DAGFD +RLR +PLG   A + D    +V  R+ L  PY++  GT EPRKNL  L+         G++L+LVGP GW  +VAS +     +R LGFVPTAD   L+ GAE    PS  EGFGLP +EAMA+GT VV +A T+ AE+ GDTG L+DPT   E   A+  +   P
Sbjct:   98 GPVDLVHLMAPIVPRRGRVPLVATLHDVFPLRFPGSFSKRGVSVMSRGLXXXXRRAALVACSSEATAADAVDAGFDGDRLRVIPLGVAAAPLPDDAVATVRRRYSLQRPYIISVGTLEPRKNLASLLPLGAELDRRGVDLVLVGPSGWA-DVASSVARASSVRWLGFVPTADRDALLAGAELAAQPSLAEGFGLPVLEAMARGTAVVTSATTSTAEVAGDTGVLVDPTNPGEVQAAVLDLLDDP 340          
BLAST of mRNA_M-pyrifera_M_contig90965.21086.1 vs. uniprot
Match: A0A7V9ZJK1_9ACTN (Glycosyltransferase family 4 protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9ZJK1_9ACTN)

HSP 1 Score: 213 bits (541), Expect = 6.300e-64
Identity = 110/245 (44.90%), Postives = 156/245 (63.67%), Query Frame = 1
Query:   16 ERVSGPVDLVHATAPMSPPVRRAPLVATLHDLFPILEPANLTPRGVRMMSRAIELMQRDATIVMCSSQQTLDDCIDAGFDPERLRFVPLGADPAVVTDADRESVAERHRLDSPYLLWAGTAEPRKNLPLLIEAYRNAAPEGLELLLVGPDGWGPEVASIIDDTPG-IRHLGFVPTADLPVLMDGAEALVFPSRREGFGLPAVEAMAQGTPVVGAAGTAIAEIVGDTGPLLDPTAVDEWSDAIRTI 747
            ER +GPVD++HAT+   PPV  AP+V T+HDL  + EP++ T RG+R   R +EL   +A +V+C S  TL DC+  GF+PERLR +P+G D     + D  S   R+ ++ P+++W GT EPRKNL  L++A+ + AP   +L+LVGP GW  ++ ++I  + G +R LGFVP ADL  L   A    FPS  EGFGLP +EAM QGTPVV + GT+  E+  D G L+DP   +  ++ I  +
Sbjct:   85 ERATGPVDVIHATSIAMPPVG-APVVVTIHDLAFLDEPSHFTKRGLRFFKRGLELALAEAALVVCPSDATLTDCVRHGFEPERLRTIPMGVDIKTAKETDIASARRRYGVERPFIMWTGTIEPRKNLTRLLQAFESLAPTH-DLILVGPHGWNEDIETLISKSDGRVRTLGFVPHADLGPLYAAASVFCFPSLFEGFGLPVLEAMGQGTPVVTSKGTSTEELAVDAGILVDPKDAESIAEGIARV 327          
BLAST of mRNA_M-pyrifera_M_contig90965.21086.1 vs. uniprot
Match: A0A6L6EPK4_9ACTN (Glycosyltransferase n=3 Tax=root TaxID=1 RepID=A0A6L6EPK4_9ACTN)

HSP 1 Score: 212 bits (540), Expect = 1.110e-63
Identity = 113/248 (45.56%), Postives = 156/248 (62.90%), Query Frame = 1
Query:   19 RVSGPVDLVHATAPMSPPVRRAPLVATLHDLFPILEPANLTPRGVRMMSRAIELMQRDATIVMCSSQQTLDDCIDAGFDPERLRFVPLGADPAVVTDADRESVAERHRLDSPYLLWAGTAEPRKNLPLLIEAYRNAAPEGLELLLVGPDGWGPEVASIIDDT-PGIRHLGFVPTADLPVLMDGAEALVFPSRREGFGLPAVEAMAQGTPVVGAAGTAIAEIVGDTGPLLDPTAVDEWSDAIRTIATSP 759
            R+ G  D++HAT    PP   A LV T+HDL  + +P++ + RGVR   RAIEL +RDAT+VMC S+ T+ +CIDAGFD +RLR VP   +P  V      +V    R+D P +LWAGT EPRKNLP+L++A+R    +   L+L GP GW  ++++ +      +R +GF+P  +L VL   A+   FPS +EGFGLPA+EAMAQGT VV +AGTA AE+ GD   L+DP      + A+  +   P
Sbjct:   86 RLVGGADVIHATGMAVPPPTTA-LVVTVHDLAFMRDPSHFSARGVRFFHRAIELARRDATLVMCPSEATIAECIDAGFDSDRLRLVPWSVEPMAVDPTQISAVRRSLRIDGPMVLWAGTIEPRKNLPVLLDAFRQLEDQTATLVLAGPQGWNEDISAKLHSLGERVRVVGFLPADELRVLQTAADIFCFPSLQEGFGLPALEAMAQGTAVVTSAGTATAEVGGDAAVLIDPLDSAALAVALDALLADP 332          
BLAST of mRNA_M-pyrifera_M_contig90965.21086.1 vs. uniprot
Match: A0A6N7FML7_9ACTN (Glycosyltransferase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FML7_9ACTN)

HSP 1 Score: 211 bits (538), Expect = 1.680e-63
Identity = 119/246 (48.37%), Postives = 153/246 (62.20%), Query Frame = 1
Query:   16 ERVSGPVDLVHATAPMSPPVRRAPLVATLHDLFPILEPANLTPRGVRMMSRAIELMQRDATIVMCSSQQTLDDCIDAGFDPERLRFVPLGADPAVVTDADRESVAERHRLDSPYLLWAGTAEPRKNLPLLIEAYRNAAPEGLELLLVGPDGWGPEVASIIDDT-PGIRHLGFVPTADLPVLMDGAEALVFPSRREGFGLPAVEAMAQGTPVVGAAGTAIAEIVGD-TGPLLDPTAVDEWSDAIRTI 747
            ER +GPVD+VHAT    PP RRAPLV T+HDL  + +    T  GVR   RA+EL +RDA +V+CSS+ T  +C  AGFDP RLR VPLG        A       R+ L   Y+LW GTAEPRKNLP+++EA+R    + L+L+LVGPDGW  ++  ++       R LGF+P ADL  +  GA A  +PS  EGFGLP  +A+ QGTPVV +AGTA AEIV D  G  +DP      ++A+  I
Sbjct:   81 ERATGPVDVVHATGVAVPP-RRAPLVVTVHDLAFLADRRRYTRHGVRFFMRALELARRDADLVLCSSEATRRECEAAGFDPSRLRVVPLGVRGRAAPAAAVTVARHRYGLARDYVLWVGTAEPRKNLPVVVEAFRQLGRDDLDLVLVGPDGWHVDLPELVRPLGEQARLLGFLPVADLDAVTAGARAFCYPSLLEGFGLPVADALVQGTPVVTSAGTATAEIVADGAGTAVDPRDPAAVAEALGAI 325          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90965.21086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0A2M1_9ACTN5.490e-7149.20Glycosyltransferase family 1 protein n=2 Tax=Bacte... [more]
A0A7X6P205_9ACTN4.800e-6847.08Glycosyltransferase family 4 protein n=1 Tax=Actin... [more]
UPI0020170E181.710e-6748.02glycosyltransferase family 4 protein n=2 Tax=Rhabd... [more]
UPI001AA042C83.050e-6546.43glycosyltransferase family 4 protein n=1 Tax=Rhabd... [more]
A0A359F3B2_9ACTN6.440e-6546.75Glycosyltransferase family 1 protein n=1 Tax=Acidi... [more]
UPI001C62D4A61.860e-6446.99glycosyltransferase family 4 protein n=1 Tax=Iamia... [more]
R4YVV6_9ACTN2.860e-6448.36Putative Glycosyl transferase, group 1 n=2 Tax=Can... [more]
A0A7V9ZJK1_9ACTN6.300e-6444.90Glycosyltransferase family 4 protein n=1 Tax=Actin... [more]
A0A6L6EPK4_9ACTN1.110e-6345.56Glycosyltransferase n=3 Tax=root TaxID=1 RepID=A0A... [more]
A0A6N7FML7_9ACTN1.680e-6348.37Glycosyltransferase n=1 Tax=Acidimicrobiia bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90965contigM-pyrifera_M_contig90965:20..781 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score215.7
Seed ortholog evalue2.5e-53
Seed eggNOG ortholog1229780.BN381_10179
KEGG koko:K00786,ko:K12994
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
EggNOG OGs2GMEW@201174,3UXQ3@52018,COG0438@1,COG0438@2
EC2.4.1.349
COG Functional cat.M
CAZyGT4
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01003,ko01005
Exons1
Model size762
Cds size762
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816821.9116216-CDS-M-pyrifera_M_contig90965:19..7811622816821.9116216-CDS-M-pyrifera_M_contig90965:19..781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90965 20..781 -
1692278198.5646274-CDS-M-pyrifera_M_contig90965:19..7811692278198.5646274-CDS-M-pyrifera_M_contig90965:19..781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90965 20..781 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90965.21086.1prot_M-pyrifera_M_contig90965.21086.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90965 20..781 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90965.21086.1

>prot_M-pyrifera_M_contig90965.21086.1 ID=prot_M-pyrifera_M_contig90965.21086.1|Name=mRNA_M-pyrifera_M_contig90965.21086.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
GFEAPERVSGPVDLVHATAPMSPPVRRAPLVATLHDLFPILEPANLTPRG
VRMMSRAIELMQRDATIVMCSSQQTLDDCIDAGFDPERLRFVPLGADPAV
VTDADRESVAERHRLDSPYLLWAGTAEPRKNLPLLIEAYRNAAPEGLELL
LVGPDGWGPEVASIIDDTPGIRHLGFVPTADLPVLMDGAEALVFPSRREG
FGLPAVEAMAQGTPVVGAAGTAIAEIVGDTGPLLDPTAVDEWSDAIRTIA
TSPG
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mRNA from alignment at M-pyrifera_M_contig90965:20..781-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90965.21086.1 ID=mRNA_M-pyrifera_M_contig90965.21086.1|Name=mRNA_M-pyrifera_M_contig90965.21086.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig90965:20..781- (Macrocystis pyrifera P11B4 male)
GGGTTCGAGGCGCCGGAACGAGTGAGCGGCCCGGTCGATCTCGTCCACGC GACGGCACCGATGAGCCCACCGGTCCGCCGGGCTCCTCTGGTGGCGACCC TCCACGATCTGTTCCCGATCCTGGAACCGGCCAACCTCACGCCTCGGGGC GTGCGAATGATGTCTCGGGCCATCGAATTGATGCAGCGCGACGCAACGAT CGTCATGTGCTCGAGCCAGCAGACCCTCGACGACTGCATCGACGCCGGTT TCGACCCCGAACGTCTGCGCTTCGTGCCGCTGGGGGCGGATCCGGCGGTC GTCACCGATGCCGACCGAGAGTCGGTGGCGGAGCGCCACCGACTCGACTC GCCGTACCTCCTCTGGGCGGGCACGGCCGAGCCCCGCAAGAATCTGCCGC TGTTGATCGAGGCTTACCGCAACGCCGCCCCGGAAGGTCTCGAACTGCTG CTGGTCGGGCCCGACGGCTGGGGTCCCGAGGTCGCATCGATCATCGACGA CACTCCCGGCATCCGCCACCTCGGTTTCGTCCCGACGGCCGACCTTCCGG TCCTGATGGACGGAGCCGAGGCGTTGGTGTTCCCGAGCCGTCGAGAGGGG TTCGGGCTTCCGGCAGTCGAAGCGATGGCCCAGGGCACACCCGTCGTCGG AGCCGCAGGCACCGCCATCGCCGAGATCGTCGGCGACACTGGCCCGCTGC TCGACCCGACCGCCGTCGACGAGTGGTCCGACGCGATCCGAACCATCGCC ACGTCCCCGGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90965:20..781-

>mRNA_M-pyrifera_M_contig90965.21086.1 ID=mRNA_M-pyrifera_M_contig90965.21086.1|Name=mRNA_M-pyrifera_M_contig90965.21086.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig90965:20..781- (Macrocystis pyrifera P11B4 male)
GGGTTCGAGGCGCCGGAACGAGTGAGCGGCCCGGTCGATCTCGTCCACGC
GACGGCACCGATGAGCCCACCGGTCCGCCGGGCTCCTCTGGTGGCGACCC
TCCACGATCTGTTCCCGATCCTGGAACCGGCCAACCTCACGCCTCGGGGC
GTGCGAATGATGTCTCGGGCCATCGAATTGATGCAGCGCGACGCAACGAT
CGTCATGTGCTCGAGCCAGCAGACCCTCGACGACTGCATCGACGCCGGTT
TCGACCCCGAACGTCTGCGCTTCGTGCCGCTGGGGGCGGATCCGGCGGTC
GTCACCGATGCCGACCGAGAGTCGGTGGCGGAGCGCCACCGACTCGACTC
GCCGTACCTCCTCTGGGCGGGCACGGCCGAGCCCCGCAAGAATCTGCCGC
TGTTGATCGAGGCTTACCGCAACGCCGCCCCGGAAGGTCTCGAACTGCTG
CTGGTCGGGCCCGACGGCTGGGGTCCCGAGGTCGCATCGATCATCGACGA
CACTCCCGGCATCCGCCACCTCGGTTTCGTCCCGACGGCCGACCTTCCGG
TCCTGATGGACGGAGCCGAGGCGTTGGTGTTCCCGAGCCGTCGAGAGGGG
TTCGGGCTTCCGGCAGTCGAAGCGATGGCCCAGGGCACACCCGTCGTCGG
AGCCGCAGGCACCGCCATCGCCGAGATCGTCGGCGACACTGGCCCGCTGC
TCGACCCGACCGCCGTCGACGAGTGGTCCGACGCGATCCGAACCATCGCC
ACGTCCCCGGGCGGGTTCGAGGCGCCGGAACGAGTGAGCGGCCCGGTCGA
TCTCGTCCACGCGACGGCACCGATGAGCCCACCGGTCCGCCGGGCTCCTC
TGGTGGCGACCCTCCACGATCTGTTCCCGATCCTGGAACCGGCCAACCTC
ACGCCTCGGGGCGTGCGAATGATGTCTCGGGCCATCGAATTGATGCAGCG
CGACGCAACGATCGTCATGTGCTCGAGCCAGCAGACCCTCGACGACTGCA
TCGACGCCGGTTTCGACCCCGAACGTCTGCGCTTCGTGCCGCTGGGGGCG
GATCCGGCGGTCGTCACCGATGCCGACCGAGAGTCGGTGGCGGAGCGCCA
CCGACTCGACTCGCCGTACCTCCTCTGGGCGGGCACGGCCGAGCCCCGCA
AGAATCTGCCGCTGTTGATCGAGGCTTACCGCAACGCCGCCCCGGAAGGT
CTCGAACTGCTGCTGGTCGGGCCCGACGGCTGGGGTCCCGAGGTCGCATC
GATCATCGACGACACTCCCGGCATCCGCCACCTCGGTTTCGTCCCGACGG
CCGACCTTCCGGTCCTGATGGACGGAGCCGAGGCGTTGGTGTTCCCGAGC
CGTCGAGAGGGGTTCGGGCTTCCGGCAGTCGAAGCGATGGCCCAGGGCAC
ACCCGTCGTCGGAGCCGCAGGCACCGCCATCGCCGAGATCGTCGGCGACA
CTGGCCCGCTGCTCGACCCGACCGCCGTCGACGAGTGGTCCGACGCGATC
CGAACCATCGCCACGTCCCCGGGC
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