mRNA_M-pyrifera_M_contig90915.21079.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90915.21079.1
Unique NamemRNA_M-pyrifera_M_contig90915.21079.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90915.21079.1 vs. uniprot
Match: UPI0003F06518 (lysosomal alpha-glucosidase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F06518)

HSP 1 Score: 234 bits (596), Expect = 1.080e-67
Identity = 121/257 (47.08%), Postives = 157/257 (61.09%), Query Frame = 1
Query:    1 WASHWLGDNTASWDDLVAMIPGILNFQLFGIPLVGADTCGFGGTSNAELCTRWMQASAIVAPFYRNHNTIGAKAQEPFVWGEPYTSVIRTAMNLRYSLIPYIYTRMHLAHAVGGAVVAEPLFVEFSAKGSNNPVQYIDTQIMLGDALMSAPVIEQGATSQNIFFPEGEVFYDWHTGMPI-SIPSKGGNVSFQVKLDTLPIFARGGYIVATQEPGLSTVLQAGNAYNLTVALGSTSKSTGQLFLDDGVTFDTYEHGKY 768
            +  HWLGDN + W D+   IPGILNF LFGIPLVGAD CGFGGT+  ELC RW Q  A   PF RNHNT+G+K Q+P  +        R  + +RYSL+PY+YT  H  H  G  +V  PLF EFS    +     ID Q + G +L+ +PV+E+ ATS N +FP  + +YD++TG  + S PSKG  ++    LD L +  RGG I+ TQ+P  +T     N Y L VA+   S + G+LF DDG T  TYE+GKY
Sbjct:  539 YGGHWLGDNNSLWKDMWYSIPGILNFNLFGIPLVGADICGFGGTTTEELCQRWQQLGAFY-PFSRNHNTLGSKDQDPTSFSPAMQKSTRDILLIRYSLLPYLYTLFHKGHVTGSTIV-RPLFFEFSM---DQEAFTIDRQFLWGSSLLISPVLEENATSVNAYFP-ADTWYDFYTGTRVTSQPSKGKMITLDAPLDKLNLHVRGGRILPTQDPNTTTTASRNNKYGLIVAMSMGSVANGELFWDDGDTLSTYENGKY 789          
BLAST of mRNA_M-pyrifera_M_contig90915.21079.1 vs. uniprot
Match: A0A8J1U3P3_OWEFU (Ofus.G10188 protein n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U3P3_OWEFU)

HSP 1 Score: 225 bits (574), Expect = 2.140e-64
Identity = 112/255 (43.92%), Postives = 161/255 (63.14%), Query Frame = 1
Query:    4 ASHWLGDNTASWDDLVAMIPGILNFQLFGIPLVGADTCGFGGTSNAELCTRWMQASAIVAPFYRNHNTIGAKAQEPFVWGEPYTSVIRTAMNLRYSLIPYIYTRMHLAHAVGGAVVAEPLFVEFSAKGSNNPVQYIDTQIMLGDALMSAPVIEQGATSQNIFFPEGEVFYDWHTGMPISIPSKGGNVSFQVKLDTLPIFARGGYIVATQEPGLSTVLQAGNAYNLTVALGSTSKSTGQLFLDDGVTFDTYEHGKY 768
            A HWLGDN + W+DL   IPGILNF +FGIPLVG DTCGFGGT+  ELCTRWM+ +A   PF RNHNTIGAK Q+P V+       +R A+ +RY+L+P++YT  + AH + G++V  PL  ++     +     ID Q +  + LM +PV+EQG TS + + P  + ++D+H+G  +++   G  V+    L+ + +  RGG I+  Q+  ++T     N +NL V L +  K+TG+L+ DDG T DT EHG Y
Sbjct:  584 AGHWLGDNNSGWNDLYYSIPGILNFNMFGIPLVGPDTCGFGGTTTEELCTRWMELAAFY-PFMRNHNTIGAKDQDPAVFSPAAQDTMRDALMMRYNLLPHLYTLFYRAH-INGSMVVRPLSFQYP---KDKATYAIDKQFLWSNTLMISPVLEQGKTSVSAYLPR-DTWFDYHSG--VAVTGTGSWVTLNAPLNYINVHVRGGSIIPRQQADVTTTAARKNPFNLLVVLSANGKATGELYWDDGDTIDTTEHGVY 830          
BLAST of mRNA_M-pyrifera_M_contig90915.21079.1 vs. uniprot
Match: A0A8J2J615_9HEXA (Hypothetical protein n=4 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2J615_9HEXA)

HSP 1 Score: 214 bits (546), Expect = 5.240e-64
Identity = 111/259 (42.86%), Postives = 156/259 (60.23%), Query Frame = 1
Query:    1 WASHWLGDNTASWDDLVAMIPGILNFQLFGIPLVGADTCGFGGTSNAELCTRWMQASAIVAPFYRNHNTIGAKAQEPFVWGEPYTSVIRTAMNLRYSLIPYIYTRMHLAHAVGGAVVAEPLFVEFSAKGSNNPVQYIDTQIMLGDALMSAPVIEQGATSQNIFFPEGEVFYDWHTGMPISIPSKGGNVSFQVKLDTLPIFARGGYIVATQEPGLSTVLQAGNAYNLTVALGSTSKSTGQLFLDDGVTFDTYEHGKYTWA 777
            W +HWLGDN + W++L   I G+L F  FGIP VGAD CGF G SNA LC RW +  A   P+ RNHN  G   Q+P +WG       R AM +RY+++PY+YT  HL HA+ G  VA PL+ EF    ++     +DTQ +LG   + +PV+E+G+ S+ +++     ++D+ TG  I   ++G +V+    +D +P+  RGG I  TQEP L+TVL   N   L VAL   ++S G L+ DDG + D+YE GKY  A
Sbjct:   93 WVTHWLGDNFSLWNNLHPSIIGMLQFNQFGIPFVGADICGFIGPSNATLCQRWQELGAFY-PYSRNHNG-GTPDQDPAIWGPEVAESTRLAMEIRYTILPYLYTLFHL-HAMNGTTVARPLWHEFP---TDETAADVDTQFLLGPGFLVSPVLEEGSVSREVYYTNAR-WFDYRTGREIF--TRGRSVAVDAPMDYIPLHVRGGVIYPTQEPALNTVLSRQNPLGLIVALDDNNRSEGILYYDDGESLDSYESGKYYLA 342          
BLAST of mRNA_M-pyrifera_M_contig90915.21079.1 vs. uniprot
Match: UPI00160014CA (lysosomal alpha-glucosidase-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI00160014CA)

HSP 1 Score: 224 bits (570), Expect = 2.080e-63
Identity = 118/254 (46.46%), Postives = 157/254 (61.81%), Query Frame = 1
Query:   10 HWLGDNTASWDDLVAMIPGILNFQLFGIPLVGADTCGFGGTSNAELCTRWMQASAIVAPFYRNHNTIGAKAQEPFVWGEPYTSVIRTAMNLRYSLIPYIYTRMHLAHAVGGAVVAEPLFVEFSAKGSNNPVQYIDTQIMLGDALMSAPVIEQGATSQNIFFPEGEVFYDWHTGMPISIPSKGGNVSFQVKLDTLPIFARGGYIVATQEPGLSTVLQAGNAYNLTVALGSTSKSTGQLFLDDGVTFDTYEHGKYT 771
            HWLGDN +SW D+   IPGILN  +FGIPLVG D CGFGG +N ELC RW Q  A   PF RNHNT+GAK+QEP VW       IR+A+  RY L+P++Y   H A  +G AV A PLF ++    +++    +DTQ + GD+LM  PV+EQGAT    +FP  + +YD+++G P+ +P  G NV+     DT+ +  RGG I+ TQ+P  +T     N + L VAL  T  + G LF DDG T DT    ++T
Sbjct:  732 HWLGDNKSSWKDMYYSIPGILNMNMFGIPLVGPDICGFGGDTNEELCLRWQQLGAFY-PFSRNHNTLGAKSQEPIVWSADTQKAIRSALLTRYLLLPHLYFLFHRASKMGEAV-ARPLFFQYP---TDSNTWGVDTQFLWGDSLMVTPVLEQGATKVTAYFPN-DTWYDFYSGRPV-VPV-GQNVTLDAPQDTINLHVRGGVILVTQQPETTTTASRRNQFGLVVALNRTLDAWGGLFWDDGDTLDTEGKKEFT 977          
BLAST of mRNA_M-pyrifera_M_contig90915.21079.1 vs. uniprot
Match: UPI001403B6F3 (lysosomal alpha-glucosidase-like n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001403B6F3)

HSP 1 Score: 222 bits (565), Expect = 4.790e-63
Identity = 115/257 (44.75%), Postives = 157/257 (61.09%), Query Frame = 1
Query:    1 WASHWLGDNTASWDDLVAMIPGILNFQLFGIPLVGADTCGFGGTSNAELCTRWMQASAIVAPFYRNHNTIGAKAQEPFVWGEPYTSVIRTAMNLRYSLIPYIYTRMHLAHAVGGAVVAEPLFVEFSAKGSNNPVQYIDTQIMLGDALMSAPVIEQGATSQNIFFPEGEVFYDWHTGMPISIPSKGGNVSFQVKLDTLPIFARGGYIVATQEPGLSTVLQAGNAYNLTVALGSTSKSTGQLFLDDGVTFDTYEHGKYT 771
            ++ HWLGDN + W D+   IPGILNF +FGIPLVGAD CGFGG++  E+C RWMQ  A   PF RNHN+   KAQ+P  + E   + ++ A+  RYSL+P++YT  H +H + G  VA  LF EF     +     ID Q + G +L+  PV+E GA+S   +FP G V+YD++TG P+   S G  +     LDT+ +  R G I+ TQEP  +T + +GN  +L VAL   + + G LF DDG + DTYE   YT
Sbjct:  608 YSGHWLGDNRSQWKDMYFSIPGILNFNMFGIPLVGADMCGFGGSTTEEMCVRWMQLGAFY-PFSRNHNSQNEKAQDPTAFSESAQAAMKRALLTRYSLLPFLYTLFHHSH-IWGETVARALFFEFP---EDRNTYSIDRQFLWGRSLLITPVLEPGASSVTAYFPRG-VWYDFYTGSPLV--STGEFIKLPAPLDTINLHLREGEIIVTQEPATTTWVSSGNPLHLLVALSQNTSAKGCLFWDDGESLDTYERNNYT 856          
BLAST of mRNA_M-pyrifera_M_contig90915.21079.1 vs. uniprot
Match: UPI0003F0CF96 (maltase-glucoamylase, intestinal-like n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0CF96)

HSP 1 Score: 223 bits (569), Expect = 5.380e-63
Identity = 120/260 (46.15%), Postives = 151/260 (58.08%), Query Frame = 1
Query:    1 WASHWLGDNTASWDDLVAMIPGILNFQLFGIPLVGADTCGFGGTSNAELCTRWMQASAIVAPFYRNHNTIGAKAQEPFVWGEPYTSVIRTAMNLRYSLIPYIYTRMHLAHAVGGAVVAEPLFVEFSAKGSNNPVQYIDTQIMLGDALMSAPVIEQGATSQNIFFPEGEVFYDWHTGMPISIPSKGGNVSFQVKLDTLPIFARGGYIVATQEPGLSTVLQAGNAYNLTVALGSTSKSTGQLFLDDGVTFDTYEHGKYTWAN 780
            W  HWLG+NTA+WD L   I G+L F LFGIP  GAD CGF G +  E+C RWMQ  A   P  RNHNT+G + Q+P  W   +  + R  +  RY+L+PY+YT MH AH V G+ V  PL  EF   G +N    ID Q MLG AL+ +PV+E G    + +FP+   +YD+ TG      S G N      LD + I  RGGYI+  QEP  +T     N   LTVAL S  K+ GQLF DDG + +TYE+G Y  AN
Sbjct: 1387 WGGHWLGENTAAWDQLKKSIIGMLEFSLFGIPYTGADVCGFLGNAEYEMCLRWMQLGAFY-PLSRNHNTMGTRRQDPVSWNSTFADISRRVLQTRYTLLPYLYTLMHQAH-VEGSTVVRPLLHEFP--GDSNTWD-IDRQFMLGPALLISPVLESGTVQVSAYFPQAR-WYDYSTGS--GEESTGSNKILDAPLDHINIHVRGGYILPWQEPANNTQYSRQNFMGLTVALDSDGKAHGQLFWDDGQSINTYENGNYFLAN 1638          
BLAST of mRNA_M-pyrifera_M_contig90915.21079.1 vs. uniprot
Match: A0A8C4SG27_ERPCA (Lysosomal alpha-glucosidase-like n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4SG27_ERPCA)

HSP 1 Score: 221 bits (563), Expect = 1.040e-62
Identity = 122/258 (47.29%), Postives = 155/258 (60.08%), Query Frame = 1
Query:    1 WASHWLGDNTASWDDLVAMIPGILNFQLFGIPLVGADTCGFGGTSNAELCTRWMQASAIVAPFYRNHNTIGAKAQEPFVWGEPYTSVIRTAMNLRYSLIPYIYTRMHLAHAVGGAVVAEPLFVEFSAKGSNNPVQYIDTQIMLGDALMSAPVIEQGATSQNIFFPEGEVFYDWHTGMPISIPSKGGNVSFQVKLDTLPIFARGGYIVATQEPGLSTVLQAGNAYNLTVALGSTSKSTGQLFLDDGVTFDTYEHGKYTW 774
            ++ HWLGDN + W DL   I GILNF L GIPLVGAD CGFG ++N ELC RWMQ  A   PF RNHNTI  +AQ+P V+       ++ A+ LRYSL P +YT  H AH + G  VA PL  EF    S+     ID Q + G +LM  PV+E+ ATS   +FP+G V+YD++T   IS  S G  V  +  LD + I+ R G I+ TQ P  +    +GN  +LT AL    K+ G LF DDGV+ DTYE   YT+
Sbjct:  625 YSGHWLGDNKSQWKDLYMSISGILNFNLLGIPLVGADICGFGDSTNEELCIRWMQLGAFY-PFSRNHNTIDVQAQDPTVFSPLAREAMKDALLLRYSLFPLLYTLFHHAH-IKGHTVARPLMFEFP---SDVTTYSIDQQFLWGKSLMVIPVLEEKATSVTAYFPKG-VWYDFYTCSSIS--SHGEKVKLEAPLDKINIYIREGAIIPTQTPNTTLWSSSGNPLHLTAALSENGKAEGDLFWDDGVSLDTYETSNYTY 874          
BLAST of mRNA_M-pyrifera_M_contig90915.21079.1 vs. uniprot
Match: UPI00144AD1E8 (uncharacterized protein n=1 Tax=Lindgomyces ingoldianus TaxID=673940 RepID=UPI00144AD1E8)

HSP 1 Score: 220 bits (560), Expect = 3.330e-62
Identity = 116/249 (46.59%), Postives = 152/249 (61.04%), Query Frame = 1
Query:    1 WASHWLGDNTASWDDLVAMIPGILNFQLFGIPLVGADTCGFGGTSNAELCTRWMQASAIVAPFYRNHNTIGAKAQEPFVWGEPYTSVIRTAMNLRYSLIPYIYTRMHLAHAVGGAVVAEPLFVEFSAKGSNNPVQY-IDTQIMLGDALMSAPVIEQGATSQNIFFP---EGEVFYDWHTGMPISIPSKGGNVSFQVKLDTLPIFARGGYIVATQEPGLSTVLQAGNAYNLTVALGSTSKSTGQLFLDDG 735
            W+ HW GDNT+ W  +   IP  L+F LFGIP+ G DTCGF G S+ ELC+RWMQ SA   PFYRNHNT+ A +QEP++W E      RTAMN+RYSL+PYIYT  + AH  G  V+   L  EF     N P+   +DTQ MLG +L+  PV+E GA + N  FP   +GEV+YDW+T   +   + G N +    L  +P+F R G ++  QEPG +T     N + L VAL     +TG L++DDG
Sbjct:  647 WSGHWGGDNTSKWYYMYFSIPQALSFSLFGIPMFGVDTCGFNGNSDYELCSRWMQLSAFF-PFYRNHNTLSANSQEPYIW-ESVARASRTAMNIRYSLLPYIYTLFYQAHTTGSTVM-RALAWEFP----NEPLLAGVDTQFMLGPSLLITPVLEPGADTVNGIFPGIIDGEVWYDWYTQEKVQAQA-GVNTTINAPLGHIPVFIRSGSVLPQQEPGYTTAESRKNPWGLLVALSEDGDATGSLYVDDG 887          
BLAST of mRNA_M-pyrifera_M_contig90915.21079.1 vs. uniprot
Match: UPI0010A0577E (LOW QUALITY PROTEIN: probable maltase-glucoamylase 2 n=2 Tax=Murinae TaxID=39107 RepID=UPI0010A0577E)

HSP 1 Score: 221 bits (563), Expect = 3.510e-62
Identity = 118/260 (45.38%), Postives = 149/260 (57.31%), Query Frame = 1
Query:    1 WASHWLGDNTASWDDLVAMIPGILNFQLFGIPLVGADTCGFGGTSNAELCTRWMQASAIVAPFYRNHNTIGAKAQEPFVWGEPYTSVIRTAMNLRYSLIPYIYTRMHLAHAVGGAVVAEPLFVEFSAKGSNNPVQYIDTQIMLGDALMSAPVIEQGATSQNIFFPEGEVFYDWHTGMPISIPSKGGNVSFQVKLDTLPIFARGGYIVATQEPGLSTVLQAGNAYNLTVALGSTSKSTGQLFLDDGVTFDTYEHGKYTWAN 780
            W  HWLGDNTA+WD L   I G++ F LFGIP  GAD CGF G ++ E+C RWMQ  A   PF RNHNT G + Q+P  W   +    R  + +RYSL+PY+YT MH AH  G  V+  PL  EF+    +N    ID Q MLG A++ +PV+E        +FP    +YD  TG   S  S G   +    LD + +  RGGYI+  QEPG++T     N   LTVAL +  K+ GQLF DDG + DTYE G Y  AN
Sbjct: 1479 WGGHWLGDNTAAWDQLGKSIIGMMEFSLFGIPYTGADICGFFGDADYEMCVRWMQLGAFY-PFSRNHNTAGTRRQDPVAWNSTFEEYSRKVLRIRYSLLPYLYTLMHKAHTEGSTVI-RPLLHEFT---EDNTTWDIDHQFMLGPAILISPVLESNTFETRAYFPRA-CWYDHSTGSGNS--SAGEWRTVPAPLDHINLHIRGGYILPWQEPGMNTYYSRKNFLGLTVALDNDGKAGGQLFWDDGQSIDTYEKGNYFLAN 1730          
BLAST of mRNA_M-pyrifera_M_contig90915.21079.1 vs. uniprot
Match: A0A8E2JCU0_9PEZI (Alpha-glucosidase n=1 Tax=Lepidopterella palustris CBS 459.81 TaxID=1314670 RepID=A0A8E2JCU0_9PEZI)

HSP 1 Score: 220 bits (560), Expect = 3.960e-62
Identity = 115/249 (46.18%), Postives = 154/249 (61.85%), Query Frame = 1
Query:    1 WASHWLGDNTASWDDLVAMIPGILNFQLFGIPLVGADTCGFGGTSNAELCTRWMQASAIVAPFYRNHNTIGAKAQEPFVWGEPYTSVIRTAMNLRYSLIPYIYTRMHLAHAVGGAVVAEPLFVEFSAKGSNNP-VQYIDTQIMLGDALMSAPVIEQGATSQNIFFP---EGEVFYDWHTGMPISIPSKGGNVSFQVKLDTLPIFARGGYIVATQEPGLSTVLQAGNAYNLTVALGSTSKSTGQLFLDDG 735
            WA HW GDN + W  +   IP  L+F LFGIP+ G DTCGF   S+ ELC RWMQ SA   PFYRNHN + A +QEP+VW     S  ++AM +RY+L+PYIYT  HLAH  GG V+   L  EF     N+P +   D Q +LG ++M  PV++QGAT+ N  FP   EGEV+YDW+    ++  S G N++    L  +P++ RG  I+ TQEPG +T     N + L +AL +   +TGQL++DDG
Sbjct:  678 WAGHWGGDNASKWYYMYFSIPQALSFSLFGIPMFGVDTCGFNDNSDEELCNRWMQLSAFF-PFYRNHNVLSANSQEPYVWASVVDST-KSAMQIRYNLLPYIYTLFHLAHTTGGTVM-RALAWEFP----NDPTLANADRQFLLGPSVMVTPVLDQGATTVNGVFPGISEGEVWYDWYAQTQVNA-SAGQNMTIDAPLGHIPVYIRGNSILPTQEPGYTTAESRKNPWGLLIALSAGGTATGQLYIDDG 918          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90915.21079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0003F065181.080e-6747.08lysosomal alpha-glucosidase-like n=1 Tax=Saccoglos... [more]
A0A8J1U3P3_OWEFU2.140e-6443.92Ofus.G10188 protein n=2 Tax=Owenia fusiformis TaxI... [more]
A0A8J2J615_9HEXA5.240e-6442.86Hypothetical protein n=4 Tax=Allacma fusca TaxID=3... [more]
UPI00160014CA2.080e-6346.46lysosomal alpha-glucosidase-like n=1 Tax=Branchios... [more]
UPI001403B6F34.790e-6344.75lysosomal alpha-glucosidase-like n=1 Tax=Amblyraja... [more]
UPI0003F0CF965.380e-6346.15maltase-glucoamylase, intestinal-like n=1 Tax=Elep... [more]
A0A8C4SG27_ERPCA1.040e-6247.29Lysosomal alpha-glucosidase-like n=2 Tax=Polypteri... [more]
UPI00144AD1E83.330e-6246.59uncharacterized protein n=1 Tax=Lindgomyces ingold... [more]
UPI0010A0577E3.510e-6245.38LOW QUALITY PROTEIN: probable maltase-glucoamylase... [more]
A0A8E2JCU0_9PEZI3.960e-6246.18Alpha-glucosidase n=1 Tax=Lepidopterella palustris... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90915contigM-pyrifera_M_contig90915:5..784 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score236.9
Seed ortholog evalue1.1e-59
Seed eggNOG ortholog10224.XP_006817350.1
KEGG rclassRC00028,RC00049,RC00077
KEGG koko:K12316
KEGG ReactionR00028,R00801,R00802
KEGG Pathwayko00052,ko00500,ko01100,ko04142,map00052,map00500,map01100,map04142
Hectar predicted targeting categoryother localisation
EggNOG free text desc.alpha-1,4-glucosidase activity
EggNOG OGs38C0A@33154,3BACU@33208,3CTEG@33213,COG1501@1,KOG1065@2759
EC3.2.1.20
COG Functional cat.G
CAZyGH31
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04147
Exons1
Model size780
Cds size780
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816821.623586-CDS-M-pyrifera_M_contig90915:4..7841622816821.623586-CDS-M-pyrifera_M_contig90915:4..784Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90915 5..784 +
1692278198.3975136-CDS-M-pyrifera_M_contig90915:4..7841692278198.3975136-CDS-M-pyrifera_M_contig90915:4..784Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90915 5..784 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90915.21079.1prot_M-pyrifera_M_contig90915.21079.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90915 5..784 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90915.21079.1

>prot_M-pyrifera_M_contig90915.21079.1 ID=prot_M-pyrifera_M_contig90915.21079.1|Name=mRNA_M-pyrifera_M_contig90915.21079.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=260bp
WASHWLGDNTASWDDLVAMIPGILNFQLFGIPLVGADTCGFGGTSNAELC
TRWMQASAIVAPFYRNHNTIGAKAQEPFVWGEPYTSVIRTAMNLRYSLIP
YIYTRMHLAHAVGGAVVAEPLFVEFSAKGSNNPVQYIDTQIMLGDALMSA
PVIEQGATSQNIFFPEGEVFYDWHTGMPISIPSKGGNVSFQVKLDTLPIF
ARGGYIVATQEPGLSTVLQAGNAYNLTVALGSTSKSTGQLFLDDGVTFDT
YEHGKYTWAN
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mRNA from alignment at M-pyrifera_M_contig90915:5..784+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90915.21079.1 ID=mRNA_M-pyrifera_M_contig90915.21079.1|Name=mRNA_M-pyrifera_M_contig90915.21079.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig90915:5..784+ (Macrocystis pyrifera P11B4 male)
TGGGCTAGTCATTGGCTTGGAGACAACACAGCGTCGTGGGATGACTTGGT TGCGATGATTCCAGGAATTCTCAACTTCCAACTCTTTGGTATTCCGCTGG TTGGAGCGGACACTTGCGGATTTGGTGGAACTTCAAACGCTGAATTGTGC ACGCGTTGGATGCAAGCATCAGCTATCGTTGCTCCATTTTACCGAAACCA CAACACAATTGGAGCAAAGGCTCAGGAGCCATTTGTTTGGGGTGAGCCGT ACACAAGTGTCATTCGTACGGCGATGAACTTGCGTTATTCTCTCATCCCT TACATCTACACTCGCATGCATTTGGCTCATGCGGTTGGAGGTGCAGTTGT TGCAGAACCATTGTTTGTTGAATTCTCTGCAAAAGGAAGCAACAATCCTG TCCAGTACATTGACACACAAATCATGCTTGGTGATGCTCTGATGTCCGCC CCAGTGATCGAGCAAGGTGCGACATCTCAAAACATTTTCTTCCCTGAAGG CGAAGTGTTTTATGACTGGCACACTGGTATGCCAATTTCGATTCCTTCCA AAGGTGGAAATGTAAGCTTCCAGGTGAAATTGGATACCCTTCCAATTTTC GCACGTGGTGGCTACATTGTGGCAACACAAGAACCTGGACTCTCAACGGT GCTTCAAGCTGGAAACGCGTACAACCTCACCGTTGCTCTTGGATCCACTT CGAAATCAACAGGACAACTCTTCCTTGATGATGGAGTTACTTTCGACACG TATGAGCATGGAAAGTATACTTGGGCCAAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90915:5..784+

>mRNA_M-pyrifera_M_contig90915.21079.1 ID=mRNA_M-pyrifera_M_contig90915.21079.1|Name=mRNA_M-pyrifera_M_contig90915.21079.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1560bp|location=Sequence derived from alignment at M-pyrifera_M_contig90915:5..784+ (Macrocystis pyrifera P11B4 male)
TGGGCTAGTCATTGGCTTGGAGACAACACAGCGTCGTGGGATGACTTGGT
TGCGATGATTCCAGGAATTCTCAACTTCCAACTCTTTGGTATTCCGCTGG
TTGGAGCGGACACTTGCGGATTTGGTGGAACTTCAAACGCTGAATTGTGC
ACGCGTTGGATGCAAGCATCAGCTATCGTTGCTCCATTTTACCGAAACCA
CAACACAATTGGAGCAAAGGCTCAGGAGCCATTTGTTTGGGGTGAGCCGT
ACACAAGTGTCATTCGTACGGCGATGAACTTGCGTTATTCTCTCATCCCT
TACATCTACACTCGCATGCATTTGGCTCATGCGGTTGGAGGTGCAGTTGT
TGCAGAACCATTGTTTGTTGAATTCTCTGCAAAAGGAAGCAACAATCCTG
TCCAGTACATTGACACACAAATCATGCTTGGTGATGCTCTGATGTCCGCC
CCAGTGATCGAGCAAGGTGCGACATCTCAAAACATTTTCTTCCCTGAAGG
CGAAGTGTTTTATGACTGGCACACTGGTATGCCAATTTCGATTCCTTCCA
AAGGTGGAAATGTAAGCTTCCAGGTGAAATTGGATACCCTTCCAATTTTC
GCACGTGGTGGCTACATTGTGGCAACACAAGAACCTGGACTCTCAACGGT
GCTTCAAGCTGGAAACGCGTACAACCTCACCGTTGCTCTTGGATCCACTT
CGAAATCAACAGGACAACTCTTCCTTGATGATGGAGTTACTTTCGACACG
TATGAGCATGGAAAGTATACTTGGGCCAATTGGGCTAGTCATTGGCTTGG
AGACAACACAGCGTCGTGGGATGACTTGGTTGCGATGATTCCAGGAATTC
TCAACTTCCAACTCTTTGGTATTCCGCTGGTTGGAGCGGACACTTGCGGA
TTTGGTGGAACTTCAAACGCTGAATTGTGCACGCGTTGGATGCAAGCATC
AGCTATCGTTGCTCCATTTTACCGAAACCACAACACAATTGGAGCAAAGG
CTCAGGAGCCATTTGTTTGGGGTGAGCCGTACACAAGTGTCATTCGTACG
GCGATGAACTTGCGTTATTCTCTCATCCCTTACATCTACACTCGCATGCA
TTTGGCTCATGCGGTTGGAGGTGCAGTTGTTGCAGAACCATTGTTTGTTG
AATTCTCTGCAAAAGGAAGCAACAATCCTGTCCAGTACATTGACACACAA
ATCATGCTTGGTGATGCTCTGATGTCCGCCCCAGTGATCGAGCAAGGTGC
GACATCTCAAAACATTTTCTTCCCTGAAGGCGAAGTGTTTTATGACTGGC
ACACTGGTATGCCAATTTCGATTCCTTCCAAAGGTGGAAATGTAAGCTTC
CAGGTGAAATTGGATACCCTTCCAATTTTCGCACGTGGTGGCTACATTGT
GGCAACACAAGAACCTGGACTCTCAACGGTGCTTCAAGCTGGAAACGCGT
ACAACCTCACCGTTGCTCTTGGATCCACTTCGAAATCAACAGGACAACTC
TTCCTTGATGATGGAGTTACTTTCGACACGTATGAGCATGGAAAGTATAC
TTGGGCCAAT
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