mRNA_M-pyrifera_M_contig90891.21068.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90891.21068.1 vs. uniprot
Match: A0A7K1B5T1_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1B5T1_9ACTN) HSP 1 Score: 119 bits (297), Expect = 9.850e-27 Identity = 82/246 (33.33%), Postives = 119/246 (48.37%), Query Frame = 1 Query: 19 PASADLAVDLGQARLYPVALDLLDHGPDVLSPFSQIIVTPGDLERLTDTQRESLEGWVGSFGGELLIDGDETDVALSIE--ANNRGSFSLGLGTVRFTGTSAAITGFDALFAPT-MPRGSQDFPWG-DFFGGVPTSINLARDAGVRVPAIGAITIGLLVYTLVVGPILWFLLKRTKREPGMWLAVPGLAVVTALGVWAVGLQLREGANTAHATVIADLPSSRQMLSQVLVTSANGGLEGISLPVGW 744 PA LA DL + L P++LD+L+ GP L+ ++ T DL L T R SL WV GG L++D + AL E + G G G +R +DA AP + P+G D F + + LA AGV +P + I + L VY L++GP+L+ +L+R +R W+A+P ++VV A GV T ATV+ P + Q L+TS GG ++P GW Sbjct: 165 PARVTLAGDLRRVDLVPLSLDVLELGPTALTQLDTVLATSDDLVALAPTARLSLFAWV-ERGGHLVLDDADDLTALPAEWRPGDAGYALAGRGEIRLADGVLTAGDWDAAIAPAALSPTDASIPFGADSF--IDPRVTLAERAGVELPRLDRIVVALAVYVLLIGPVLYLVLRRLRRLTAAWIAIPAISVVMATGVVITSRDWGSDDGTTGATVVESGPVGSVIGYQQLLTSRGGGTASFTVPSGW 407
BLAST of mRNA_M-pyrifera_M_contig90891.21068.1 vs. uniprot
Match: A0A2H6HCE8_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2H6HCE8_9BACT) HSP 1 Score: 66.2 bits (160), Expect = 1.020e-8 Identity = 61/215 (28.37%), Postives = 100/215 (46.51%), Query Frame = 1 Query: 40 VDLGQARLYPVALDLLDHGPD------VLSPFSQIIVTPGDLERLTDTQRESLEGWVGSFGGELLIDGDETDVALSIEANNRGSF----SLGLGTVRFTGTSA-AITGFDALFAPTMPRGSQDFPWGDFFGGVPTSINLARDAGVRVPAIGAITIGLLVYTLVVGPILWFLLKRTKREPGMWLAVPGLAVVTALGVWAVGLQLREGANTAHATVI 651 VDLGQAR +P+ ++ G + + S ++ G L +D R +L W+ S GG L+ + DVA S+ G F +L G + A A+ G+D +F T G+ FG + + AR + VPA+ + G+ ++ L+VGP+ +F+L+RT R W+ +P ++V + VG Q E A A + Sbjct: 156 VDLGQARSFPLERNIFTVGEQAGGFARLNTAVSYVVAADGTLVATSDDDRVALLSWIRS-GGTLIA--SQRDVA-SLGEEFAGGFVDETTLASGRIVIGDVGALALNGWDRVFIDTPSIGTVVSYIDQNFGSLDAAAASARP--LSVPALPWLVSGIAMFVLLVGPVNFFVLRRTGRPELAWITIPAASIVFFVAFLVVGQQSVESEVYASAVAL 364
BLAST of mRNA_M-pyrifera_M_contig90891.21068.1 vs. uniprot
Match: A0A3B0T3A7_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0T3A7_9ZZZZ) HSP 1 Score: 59.3 bits (142), Expect = 2.090e-6 Identity = 56/203 (27.59%), Postives = 99/203 (48.77%), Query Frame = 1 Query: 40 VDLGQARLYPVALDLLDHGPDVLSPF-------SQIIVTPGDLERLTDTQRESLEGWVGSFGGELLIDGDETDVALSIEANNRGSF----SLGLGTVRFTGTSA-AITGFDALFAPTMPRGSQDFPWGDFFGGVPTSINLARDAGVRVPAIGAITIGLLVYTLVVGPILWFLLKRTKREPGMWLAVPGLAVVTALGVWAVGLQ 612 VDLG+AR +P+ D+ G D S F S ++ G L +D + +L W+ + GG L+ ++DVA S+ G F ++ G + +A A+ G+D +F T G+ FG + + AR + VPA+ + G+ ++ L+VGP+ +F+L+RT + W+ +P ++V + +G Q Sbjct: 156 VDLGRARSFPLERDIFTVG-DQESGFIRLNTAVSYVVAAEGSLSDRSDEDKATLVKWIKA-GGVLVA--SQSDVA-SLGDEFSGGFIDDAAIAPGRILVGDVAALALNGWDRVFIDTPSVGTVVAYAEQGFGSLDAAAASARP--LSVPALPWLVSGIAMFVLLVGPVNFFVLRRTGKPELAWVTIPVASIVFFVAFLVIGQQ 351
BLAST of mRNA_M-pyrifera_M_contig90891.21068.1 vs. uniprot
Match: UPI001B09BE9F (hypothetical protein n=1 Tax=Paenibacillus sp. J2TS4 TaxID=2807194 RepID=UPI001B09BE9F) HSP 1 Score: 56.6 bits (135), Expect = 1.700e-5 Identity = 32/97 (32.99%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 391 FFGGVPTSINLARD--AGVRVPAIGAITIGLLVYTLVVGPILWFLLKRTKREPGMWLAVPGLAVVTALGVWAVGLQLREGANTAHATVIADLPSSRQ 675 ++G +N A D + P++G + + +++Y V+GPIL+F LK+ R MW +P LA+V +LG++ VG R GA A + +L + Q Sbjct: 352 YYGSAGWELNNALDYFPSLTPPSVGILVLVIIIYAAVIGPILYFTLKKLDRREWMWFTIPLLAIVFSLGIYGVGASGR-GAVMAQSLTTIELDGAGQ 447
BLAST of mRNA_M-pyrifera_M_contig90891.21068.1 vs. uniprot
Match: A0A0K9YMK4_9BACL (Uncharacterized protein n=2 Tax=Brevibacillus reuszeri TaxID=54915 RepID=A0A0K9YMK4_9BACL) HSP 1 Score: 56.2 bits (134), Expect = 2.270e-5 Identity = 25/83 (30.12%), Postives = 46/83 (55.42%), Query Frame = 1 Query: 427 RDAGVRVPAIGAITIGLLVYTLVVGPILWFLLKRTKREPGMWLAVPGLAVVTALGVWAVGLQLREGANTAHATVIADLPSSRQ 675 R +++P + + VY L+ GP+L+F+L+ +++ MW+ VPGLA++T +G+++ G R H T L + Q Sbjct: 354 RIPALKIPEVSWFAVFFGVYALIAGPVLYFILRAKRKQSYMWVIVPGLAIITGIGIFSFGAMQRGTGVMVHQTGFVQLTNDGQ 436
BLAST of mRNA_M-pyrifera_M_contig90891.21068.1 vs. uniprot
Match: UPI000CCC6067 (hypothetical protein n=1 Tax=Brevibacillus reuszeri TaxID=54915 RepID=UPI000CCC6067) HSP 1 Score: 56.2 bits (134), Expect = 2.270e-5 Identity = 26/83 (31.33%), Postives = 46/83 (55.42%), Query Frame = 1 Query: 427 RDAGVRVPAIGAITIGLLVYTLVVGPILWFLLKRTKREPGMWLAVPGLAVVTALGVWAVGLQLREGANTAHATVIADLPSSRQ 675 R +++P + + VY L+ GP+L+F+L+ +++ MW+ VPGLA+VT +G+++ G R H T L + Q Sbjct: 354 RIPALKIPEVSWFALFFGVYALIAGPVLYFILRVKRKQSYMWVIVPGLAIVTGIGIFSFGAMQRGSGVMVHQTGFVQLTNDGQ 436
BLAST of mRNA_M-pyrifera_M_contig90891.21068.1 vs. uniprot
Match: A0A3M8AV72_9BACL (Uncharacterized protein n=1 Tax=Brevibacillus gelatini TaxID=1655277 RepID=A0A3M8AV72_9BACL) HSP 1 Score: 55.5 bits (132), Expect = 4.090e-5 Identity = 24/84 (28.57%), Postives = 47/84 (55.95%), Query Frame = 1 Query: 424 ARDAGVRVPAIGAITIGLLVYTLVVGPILWFLLKRTKREPGMWLAVPGLAVVTALGVWAVGLQLREGANTAHATVIADLPSSRQ 675 A + +++P + + +VY L+ GPIL+F+L+ +++ MW+ VP L+++T +G+++ G R H T L + Q Sbjct: 352 AMNPALKIPDVSWFVLFFVVYALIAGPILFFILRAWRKQSYMWVIVPSLSIITGIGIFSFGAMQRGAGVLVHQTSFVQLQNDGQ 435
BLAST of mRNA_M-pyrifera_M_contig90891.21068.1 vs. uniprot
Match: A0A2V5JXZ2_9BACL (Uncharacterized protein n=1 Tax=Paenibacillus flagellatus TaxID=2211139 RepID=A0A2V5JXZ2_9BACL) HSP 1 Score: 55.1 bits (131), Expect = 5.500e-5 Identity = 34/89 (38.20%), Postives = 50/89 (56.18%), Query Frame = 1 Query: 448 PAIGAITIGLLVYTLVVGPILWFLLKRTKREPGMWLAVPGLAVVTALGVWAVGLQLREGANTAHATVIADLP----SSRQMLSQVLVTS 702 PA G +T+ LVY +VV P L+ +LKR R W A+P +AVVT++ ++AVG R G+ A + +L ++R S V V S Sbjct: 375 PAYGVLTLLFLVYAIVVAPALYLVLKRIDRREWAWFAIPSIAVVTSVLIYAVGASDR-GSTLAQTLAVNELSGTGSATRMAASSVFVPS 462 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90891.21068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90891.21068.1 >prot_M-pyrifera_M_contig90891.21068.1 ID=prot_M-pyrifera_M_contig90891.21068.1|Name=mRNA_M-pyrifera_M_contig90891.21068.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=260bp LAGRELPASADLAVDLGQARLYPVALDLLDHGPDVLSPFSQIIVTPGDLEback to top mRNA from alignment at M-pyrifera_M_contig90891:6..785- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90891.21068.1 ID=mRNA_M-pyrifera_M_contig90891.21068.1|Name=mRNA_M-pyrifera_M_contig90891.21068.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig90891:6..785- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90891:6..785- >mRNA_M-pyrifera_M_contig90891.21068.1 ID=mRNA_M-pyrifera_M_contig90891.21068.1|Name=mRNA_M-pyrifera_M_contig90891.21068.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1560bp|location=Sequence derived from alignment at M-pyrifera_M_contig90891:6..785- (Macrocystis pyrifera P11B4 male)back to top |