mRNA_M-pyrifera_M_contig90526.20989.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90526.20989.1
Unique NamemRNA_M-pyrifera_M_contig90526.20989.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90526.20989.1 vs. uniprot
Match: A0A5A8CSX9_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CSX9_CAFRO)

HSP 1 Score: 201 bits (510), Expect = 2.150e-57
Identity = 107/206 (51.94%), Postives = 145/206 (70.39%), Query Frame = 1
Query:   25 KGIISMVFGMSDLMSKEVFHVTTLDQERSAVKHMKGLAFLRANADNLRLLKEELRDPKCSEYHLFFSNILPAGYLNKLAECDERSVVMQVQEFYADFYPINSDLFSLNLGASLTLERPTGSAMGHLTPAEATFLRSVDGCAGVLLAFKVRPFVRFQQASASALAFAKAMDALFVSQRELFHFSPPPHPA-MLLVLDRKEDPITPLL 639
            KG++SM  GM++++ +EVF V T+D+ER A+ HMK + F RAN+ NLRLL +EL+ PK S+YH+F SNI P  +L++LA+ D  S V QV+E+YAD+  +  +LFSLNL ++  + +P     G LT  EATF RS+DG   VLLA K+RP +RFQ  S  A  FA+A+D+   SQRELF   P   P+ +LLVLDRKEDP+TPLL
Sbjct:   59 KGMVSMAIGMAEILEREVFFVGTIDRERDAMPHMKAIVFCRANSANLRLLADELKTPKHSQYHIFLSNIAPPSFLDQLAKADVHSRVEQVREYYADYSAVAPELFSLNLRSASLMCKPAAGPYGSLTMEEATFQRSLDGVMSVLLAHKLRPAIRFQGTSPLAGHFARAVDSSIGSQRELFGLMPHSSPSPLLLVLDRKEDPVTPLL 264          
BLAST of mRNA_M-pyrifera_M_contig90526.20989.1 vs. uniprot
Match: A0A813BVK7_9DINO (Vps45 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BVK7_9DINO)

HSP 1 Score: 184 bits (467), Expect = 2.790e-51
Identity = 100/208 (48.08%), Postives = 137/208 (65.87%), Query Frame = 1
Query:   25 KGIISMVFGMSDLMSKEVFHVTTLDQERSAVKHMKGLAFLRANADNLRLLKEELRDPKCSEYHLFFSNILPAGYLNKLAECDERSVVMQVQEFYADFYPINSDLFSLNLGASLTLERPTG---SAMGHLTPAEATFLRSVDGCAGVLLAFKVRPFVRFQQASASALAFAKAMDALFVSQRELFHFSPPPHPAMLLVLDRKEDPITPLL 639
            K I+SMV+ M +++ K++FHV T+D+ +  + H+K L  +R   +NL+ L+EEL  PK   Y+L+F+N + A +L  LAE D + VV QVQE YADFY +NS+LF LNLG SL L  P G   +A GHL      F R+  G A  LLAFKVRPF+R Q+ +A A + A+ +++    +RELF F  P    MLLVLDR+EDP+TPLL
Sbjct:   61 KAIVSMVYTMHEILDKDIFHVGTIDKVQEPMLHIKALVLVRPTLENLKALREELAAPKFGSYYLYFTNTVKADFLQHLAEADTQQVVQQVQEVYADFYAVNSNLFHLNLGGSLALSLPRGRWSAAEGHL------FERTAQGLAATLLAFKVRPFIRHQR-TAVAASLAREVNSTMTGERELFSFKRPAGTPMLLVLDRQEDPVTPLL 261          
BLAST of mRNA_M-pyrifera_M_contig90526.20989.1 vs. uniprot
Match: A0A7S1CCK5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCK5_9STRA)

HSP 1 Score: 179 bits (455), Expect = 7.720e-50
Identity = 102/206 (49.51%), Postives = 131/206 (63.59%), Query Frame = 1
Query:   25 KGIISMVFGMSDLMSKEVFHVTTLDQERSAVKHMKGLAFLRANADNLRLLKEELRDPKCSEYHLFFSNILPAGYLNKLAECDERSVVMQVQEFYADFYPINSDLFSLNLGASLTLERPTGSAMGHLTPAEATFLRSVDGCAGVLLAFKVRPFVRFQQASASALAFAKAMDALFVSQRELFHFSPPPHP-AMLLVLDRKEDPITPLL 639
            KGIISMV+ MS ++ +EV+ V TL+    ++ HMK L FLR   +N+ LLKEEL+ PK SEYH+FFSNILP  YL +LAE DE   V  VQEFYAD+Y IN+D FSLNLG SL+L  P  S     +     F R+V G    LL+ KVRPF+R+   S  A  F + + +   +  ELF F        +LLVLDR++DP+TPLL
Sbjct:   33 KGIISMVYTMSQILEREVYLVETLEAAHESMMHMKALCFLRPVPENIALLKEELKSPKYSEYHIFFSNILPQDYLRQLAEADEHCAVKSVQEFYADYYAINADFFSLNLGQSLSLSGPRAS---WPSVTSRIFDRAVQGLISALLSMKVRPFLRYSANSEVATLFTRKIQSEIKNWYELFDFRRTEGSRTVLLVLDRRDDPVTPLL 235          
BLAST of mRNA_M-pyrifera_M_contig90526.20989.1 vs. uniprot
Match: A0A7S0NCG7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NCG7_9EUKA)

HSP 1 Score: 152 bits (384), Expect = 1.440e-41
Identity = 84/205 (40.98%), Postives = 126/205 (61.46%), Query Frame = 1
Query:   28 GIISMVFGMSDLMSKEVFHVTTLDQERS-AVKHMKGLAFLRANADNLRLLKEELRDPKCSEYHLFFSNILPAGYLNKLAECDERSVVMQVQEFYADFYPINSDLFSLNLGASLTLERPTGSAMGHLTPAEATFLRSVDGCAGVLLAFKVRPFVRFQQASASALAFAKAMDALFVSQRELFHFSPPPHPAMLLVLDRKEDPITPLL 639
            GI+SMV+  + ++ +EVF +  +++ R+  + H+K +  +R   +N+RLL+EE ++PK  EYHLFF+N+   G + +LA+ DE  VV QVQEFYADF PIN +LFSLN+        P+ + +      +A F R   G    LL  K RP VR+Q  S  A+  A++      ++ ELF F  P  P +LL+LDR++DP+TPLL
Sbjct:   39 GIVSMVYTQTQILQQEVFLIDAIEKGRTDKMPHLKAVYCVRPTPENIRLLQEEFKEPKYGEYHLFFTNLTREGQIQQLAQADEHEVVQQVQEFYADFVPINHELFSLNV--------PSVTGLSGAAWDQAVFDRVHQGVCAALLGLKKRPVVRYQANSEMAMRLAESTLGTMDTEGELFGFRRPEVPPLLLLLDRRDDPVTPLL 235          
BLAST of mRNA_M-pyrifera_M_contig90526.20989.1 vs. uniprot
Match: A0A2D4BWD3_PYTIN (Vacuolar protein sortingassociated protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWD3_PYTIN)

HSP 1 Score: 157 bits (397), Expect = 1.820e-41
Identity = 94/217 (43.32%), Postives = 129/217 (59.45%), Query Frame = 1
Query:   31 IISMVFGMSDLMSKEVFHVTTLDQERSAVKHMKGLAFLRANADNLRLLKEELRDPKCSEYHLFFSNILPAGYLNKLAECDERSVVMQVQEFYADFYPINSDLFSLNLGASLTLER-------PTGSAMGHLT----PAEAT--FLRSVDGCAGVLLAFKVRPFVRFQQASASALAFAKAMDA-LFVSQRELFHFSPPPHPAMLLVLDRKEDPITPLL 639
            I+SMV   S ++ +EVF V  LD     + H+K  AFLR  A N+ LLK+EL++PK  +YH+FFSNILP   L +LAE DE+ VV Q+QE+YADF  +N  LF  NL  S+ +         P+ +  G +T    PA     F RSVDG   +LL+ K RP +R+Q+ S  A   A+ + A + + Q  LF F  P    +L VLDR++DP+TPLL
Sbjct:   20 IVSMVLSQSQILQREVFLVEPLDAAHEPMLHLKAAAFLRPTAANIELLKKELKNPKFGQYHIFFSNILPVELLERLAEADEKEVVHQIQEYYADFLAVNDTLFHFNLRGSVAMSXXGLGWNAPSPTTAGVVTNGGLPARTAQVFNRSVDGLLSLLLSLKKRPTIRYQKGSEIAEKLAREVSARMQLEQDGLFDFRRPEVLPLLYVLDRRDDPVTPLL 236          
BLAST of mRNA_M-pyrifera_M_contig90526.20989.1 vs. uniprot
Match: L8GLQ1_ACACA (Vacuolar protein sortingassociated protein 45, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GLQ1_ACACA)

HSP 1 Score: 155 bits (393), Expect = 4.950e-41
Identity = 90/217 (41.47%), Postives = 127/217 (58.53%), Query Frame = 1
Query:    1 GLYVFVVQK---GIISMVFGMSDLMSKEVFHVTTLDQE-RSAVKHMKGLAFLRANADNLRLLKEELRDPKCSEYHLFFSNILPAGYLNKLAECDERSVVMQVQEFYADFYPINSDLFSLNLGASLTLERPTGSAMGHLTPAEATFLRSVDGCAGVLLAFKVRPFVRFQQASASALAFAKAMDALFVSQRELFHFSPPPHPAMLLVLDRKEDPITPLL 639
            G+ V ++ K   GI+S+V+  S ++ KEV+    +D E R  + H+K + FLR  A+N++ L  ELR PK  EYHLFFSNI+P+ +L +LAE DE  VV QVQEFYADFY +N  LFSLN+   + LE P                R+ DG A VLLAFK +P +R  + S      A+ +      ++ LF F       +L++LDR+ DP++PLL
Sbjct:    7 GMKVLIMDKETTGIVSLVYSQSQILQKEVYLFERIDAEGRELMAHLKAICFLRPTAENVQALCRELRKPKYGEYHLFFSNIMPSHFLEELAEADEHEVVQQVQEFYADFYALNPGLFSLNIETFIGLETPQ---------LREVIERTSDGLASVLLAFKRKPVIRCARNSEIGQRVAQDITKRMTQEKSLFDFRRTETAPLLIILDRRNDPVSPLL 214          
BLAST of mRNA_M-pyrifera_M_contig90526.20989.1 vs. uniprot
Match: A0A2R5GQ98_9STRA (Vacuolar protein sorting-associated protein 45 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQ98_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.450e-40
Identity = 84/204 (41.18%), Postives = 128/204 (62.75%), Query Frame = 1
Query:   28 GIISMVFGMSDLMSKEVFHVTTLDQERSAVKHMKGLAFLRANADNLRLLKEELRDPKCSEYHLFFSNILPAGYLNKLAECDERSVVMQVQEFYADFYPINSDLFSLNLGASLTLERPTGSAMGHLTPAEATFLRSVDGCAGVLLAFKVRPFVRFQQASASALAFAKAMDALFVSQRELFHFSPPPHPAMLLVLDRKEDPITPLL 639
            GI+SMV   + ++ +EVF  T L + R A+ H+K + + R    N++ L++ELR+PK  EYH+FFSNI+    L +LA+ DER VV QVQE +ADFY +N++LF+LN+  SL    P           E ++ R+V+G    LLAFK RP +RFQ++S     FA+ +      +++LF F      ++LL++DR++DP+TPLL
Sbjct:   57 GILSMVMSQTKVLEREVFLATNLTESREAMMHLKAVVYCRPTRSNVQALRQELREPKYGEYHIFFSNIVRQDLLQQLADADEREVVKQVQEVFADFYAVNNELFTLNIANSLLHSVPRTR---WSRDEEGSYYRTVEGVLASLLAFKKRPAIRFQRSSDLCHNFAREIKHQMEREQQLFDFRDG-QSSLLLIVDRRDDPVTPLL 256          
BLAST of mRNA_M-pyrifera_M_contig90526.20989.1 vs. uniprot
Match: A0A225WK99_9STRA (Vacuolar protein sorting-associated protein n=12 Tax=Phytophthora TaxID=4783 RepID=A0A225WK99_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.680e-40
Identity = 93/225 (41.33%), Postives = 128/225 (56.89%), Query Frame = 1
Query:   25 KGIISMVFGMSDLMSKEVFHVTTLDQERSAVKHMKGLAFLRANADNLRLLKEELRDPKCSEYHLFFSNILPAGYLNKLAECDERSVVMQVQEFYADFYPINSDLFSLNLGAS--LTLERPTGSAMGHLTPAEA-----------------TFLRSVDGCAGVLLAFKVRPFVRFQQASASALAFAKAMDA-LFVSQRELFHFSPPPHPAMLLVLDRKEDPITPLL 639
            K +ISMV   S ++ +EVF V  LD    ++ H+K   F+R  A N+ LL+ EL++PK   YHLFFSNILP   L K+AE DE+ VVMQ+QE+YAD+  +N  LF   L  S  L+++ PT    G L+ A A                  F RSV+G   VLL+ K RP +R+ + S  A   A+ + A + + Q  LF F  P    ++ VLDRK+DP+TPLL
Sbjct:   35 KSVISMVMSQSHILQREVFLVEQLDASHESMLHLKAAVFVRPTARNVELLRRELKNPKYGRYHLFFSNILPVEALEKIAEADEKEVVMQIQEYYADYLAVNDSLFDFGLHNSIQLSVKMPTSLPGGGLSTATAGVLTTDPVNKTKMTPPQLFQRSVEGLLSVLLSMKKRPTIRYAKGSEVAEKLAREVSARMQLEQDGLFDFRRPEVTPLVYVLDRKDDPVTPLL 259          
BLAST of mRNA_M-pyrifera_M_contig90526.20989.1 vs. uniprot
Match: A0A7S0NCH0_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NCH0_9EUKA)

HSP 1 Score: 152 bits (384), Expect = 2.100e-39
Identity = 84/205 (40.98%), Postives = 126/205 (61.46%), Query Frame = 1
Query:   28 GIISMVFGMSDLMSKEVFHVTTLDQERS-AVKHMKGLAFLRANADNLRLLKEELRDPKCSEYHLFFSNILPAGYLNKLAECDERSVVMQVQEFYADFYPINSDLFSLNLGASLTLERPTGSAMGHLTPAEATFLRSVDGCAGVLLAFKVRPFVRFQQASASALAFAKAMDALFVSQRELFHFSPPPHPAMLLVLDRKEDPITPLL 639
            GI+SMV+  + ++ +EVF +  +++ R+  + H+K +  +R   +N+RLL+EE ++PK  EYHLFF+N+   G + +LA+ DE  VV QVQEFYADF PIN +LFSLN+        P+ + +      +A F R   G    LL  K RP VR+Q  S  A+  A++      ++ ELF F  P  P +LL+LDR++DP+TPLL
Sbjct:   39 GIVSMVYTQTQILQQEVFLIDAIEKGRTDKMPHLKAVYCVRPTPENIRLLQEEFKEPKYGEYHLFFTNLTREGQIQQLAQADEHEVVQQVQEFYADFVPINHELFSLNV--------PSVTGLSGAAWDQAVFDRVHQGVCAALLGLKKRPVVRYQANSEMAMRLAESTLGTMDTEGELFGFRRPEVPPLLLLLDRRDDPVTPLL 235          
BLAST of mRNA_M-pyrifera_M_contig90526.20989.1 vs. uniprot
Match: K3WVQ4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVQ4_GLOUD)

HSP 1 Score: 151 bits (381), Expect = 3.950e-39
Identity = 92/218 (42.20%), Postives = 126/218 (57.80%), Query Frame = 1
Query:   31 IISMVFGMSDLMSKEVFHVTTLDQERSAVKHMKGLAFLRANADNLRLLKEELRDPKCSEYHLFFSNILPAGYLNKLAECDERSVVMQVQEFYADFYPINSDLFSLNL-GASLTLERPTGSAMGHLT-------------PAEATFLRSVDGCAGVLLAFKVRPFVRFQQASASALAFAKAMDA-LFVSQRELFHFSPPPHPAMLLVLDRKEDPITPLL 639
            +ISMV   S ++ +EVF V  LD     + H+K   F+R  A N+ LLK+EL+ PK  +YH+FFSNILP   L ++AE DER VV Q+QE+YADF  +N  LF  NL GA+    R   +A    T             PA+  F R+V+G   VLL+ K RP +R+Q+ S  A   A+ + A + + Q  LF F  P    +L VLDR++DP+TPLL
Sbjct:   35 VISMVMSQSQILQREVFLVEPLDAAHEPMPHLKAAVFVRPTAANVELLKKELKTPKYGQYHIFFSNILPVELLERIAEADEREVVHQIQEYYADFLAVNDTLFHFNLKGATQLSVRTAANAPSPTTAGVVVSGGAVASKPAQL-FTRTVEGLLSVLLSLKKRPTIRYQKGSEIAEKLAREVSARMQLEQDGLFDFRRPEIMPLLYVLDRRDDPVTPLL 251          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90526.20989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CSX9_CAFRO2.150e-5751.94Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A813BVK7_9DINO2.790e-5148.08Vps45 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A7S1CCK5_9STRA7.720e-5049.51Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S0NCG7_9EUKA1.440e-4140.98Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A2D4BWD3_PYTIN1.820e-4143.32Vacuolar protein sortingassociated protein putativ... [more]
L8GLQ1_ACACA4.950e-4141.47Vacuolar protein sortingassociated protein 45, put... [more]
A0A2R5GQ98_9STRA1.450e-4041.18Vacuolar protein sorting-associated protein 45 n=1... [more]
A0A225WK99_9STRA2.680e-4041.33Vacuolar protein sorting-associated protein n=12 T... [more]
A0A7S0NCH0_9EUKA2.100e-3940.98Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
K3WVQ4_GLOUD3.950e-3942.20Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90526contigM-pyrifera_M_contig90526:2..736 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score162.9
Seed ortholog evalue1.6e-37
Seed eggNOG ortholog42099.EPrPV00000015692
Preferred nameVPS45
KEGG rclassRC00053,RC00209,RC00870
KEGG koko:K03495,ko:K12479,ko:K20367
KEGG ReactionR08701
KEGG Pathwayko04138,ko04144,map04138,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000011,GO:0000139,GO:0000149,GO:0000325,GO:0001505,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005794,GO:0005802,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006836,GO:0006873,GO:0006885,GO:0006886,GO:0006887,GO:0006892,GO:0006895,GO:0006896,GO:0006897,GO:0006898,GO:0006906,GO:0006907,GO:0006950,GO:0006996,GO:0007033,GO:0007034,GO:0007035,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007596,GO:0007599,GO:0008021,GO:0008104,GO:0008150,GO:0009611,GO:0009705,GO:0009987,GO:0010008,GO:0010638,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016082,GO:0016192,GO:0016482,GO:0017156,GO:0019725,GO:0019898,GO:0022607,GO:0023052,GO:0023061,GO:0030003,GO:0030004,GO:0030133,GO:0030641,GO:0031090,GO:0031201,GO:0031224,GO:0031334,GO:0031338,GO:0031340,GO:0031410,GO:0031982,GO:0031984,GO:0032258,GO:0032501,GO:0032588,GO:0032879,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034058,GO:0034613,GO:0034622,GO:0035542,GO:0035543,GO:0042060,GO:0042592,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045851,GO:0046903,GO:0046907,GO:0048193,GO:0048210,GO:0048227,GO:0048284,GO:0048308,GO:0048489,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050817,GO:0050878,GO:0050896,GO:0051049,GO:0051050,GO:0051082,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055067,GO:0055080,GO:0055082,GO:0060627,GO:0061024,GO:0061025,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070382,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090174,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098657,GO:0098771,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140029
EggNOG free text desc.Vacuolar protein sorting-associated protein. Source PGD
EggNOG OGs1MBXX@121069,COG5158@1,KOG1299@2759
COG Functional cat.U
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03016,ko03036,ko04131
Exons2
Model size639
Cds size639
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816817.2075603-CDS-M-pyrifera_M_contig90526:1..5641622816817.2075603-CDS-M-pyrifera_M_contig90526:1..564Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90526 2..564 -
1692278195.7559154-CDS-M-pyrifera_M_contig90526:1..5641692278195.7559154-CDS-M-pyrifera_M_contig90526:1..564Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90526 2..564 -
1622816817.2192047-CDS-M-pyrifera_M_contig90526:660..7361622816817.2192047-CDS-M-pyrifera_M_contig90526:660..736Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90526 661..736 -
1692278195.7686749-CDS-M-pyrifera_M_contig90526:660..7361692278195.7686749-CDS-M-pyrifera_M_contig90526:660..736Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90526 661..736 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90526.20989.1prot_M-pyrifera_M_contig90526.20989.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90526 2..736 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90526.20989.1

>prot_M-pyrifera_M_contig90526.20989.1 ID=prot_M-pyrifera_M_contig90526.20989.1|Name=mRNA_M-pyrifera_M_contig90526.20989.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp
GLYVFVVQKGIISMVFGMSDLMSKEVFHVTTLDQERSAVKHMKGLAFLRA
NADNLRLLKEELRDPKCSEYHLFFSNILPAGYLNKLAECDERSVVMQVQE
FYADFYPINSDLFSLNLGASLTLERPTGSAMGHLTPAEATFLRSVDGCAG
VLLAFKVRPFVRFQQASASALAFAKAMDALFVSQRELFHFSPPPHPAMLL
VLDRKEDPITPLL
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mRNA from alignment at M-pyrifera_M_contig90526:2..736-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90526.20989.1 ID=mRNA_M-pyrifera_M_contig90526.20989.1|Name=mRNA_M-pyrifera_M_contig90526.20989.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=735bp|location=Sequence derived from alignment at M-pyrifera_M_contig90526:2..736- (Macrocystis pyrifera P11B4 male)
GGATTGTATGTTTTTGTTGTGCAGAAAGGTATCATTTCTATGGTGTTTGG GATGTCTGATTTGATGTCGAAAGAAGGTAAATCGGCGCCAGGGGCGATGG TGGGTTGGTTTTGCGGAGTTTGGGATTGGTGTTGAGGGTGTGGAGTGTTT TTTCCTGTGTGTTGTGCTGCAGTATTTCATGTTACGACGTTGGATCAGGA GAGGAGTGCGGTGAAGCACATGAAAGGGTTGGCTTTTCTTCGTGCGAACG CAGACAACCTGCGTCTGCTAAAGGAGGAGCTGCGTGACCCCAAGTGCAGC GAGTACCACCTCTTCTTCAGCAACATTCTGCCGGCAGGGTACCTGAATAA GCTGGCGGAATGCGACGAGCGAAGCGTGGTGATGCAGGTGCAGGAGTTTT ACGCGGATTTCTACCCGATCAACTCGGACCTGTTTTCGCTCAACCTGGGA GCCTCGCTGACGCTGGAGCGGCCCACGGGCAGCGCCATGGGCCATCTGAC ACCTGCGGAAGCCACGTTTTTGCGATCGGTGGACGGGTGTGCTGGAGTGT TGCTTGCATTCAAGGTGCGTCCATTCGTGCGGTTCCAGCAGGCGTCTGCA AGCGCTCTGGCGTTCGCCAAGGCGATGGACGCTCTGTTCGTGTCGCAGCG GGAGCTGTTCCACTTCTCCCCGCCGCCTCACCCGGCGATGCTGCTGGTGC TGGATCGCAAAGAAGACCCCATCACGCCTCTGCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90526:2..736-

>mRNA_M-pyrifera_M_contig90526.20989.1 ID=mRNA_M-pyrifera_M_contig90526.20989.1|Name=mRNA_M-pyrifera_M_contig90526.20989.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig90526:2..736- (Macrocystis pyrifera P11B4 male)
GGATTGTATGTTTTTGTTGTGCAGAAAGGTATCATTTCTATGGTGTTTGG
GATGTCTGATTTGATGTCGAAAGAAGGGATTGTATGTTTTTGTTGTGCAG
AAAGGTATCATTTCTATGGTGTTTGGGATGTCTGATTTGATGTCGAAAGA
AGTATTTCATGTTACGACGTTGGATCAGGAGAGGAGTGCGGTGAAGCACA
TGAAAGGGTTGGCTTTTCTTCGTGCGAACGCAGACAACCTGCGTCTGCTA
AAGGAGGAGCTGCGTGACCCCAAGTGCAGCGAGTACCACCTCTTCTTCAG
CAACATTCTGCCGGCAGGGTACCTGAATAAGCTGGCGGAATGCGACGAGC
GAAGCGTGGTGATGCAGGTGCAGGAGTTTTACGCGGATTTCTACCCGATC
AACTCGGACCTGTTTTCGCTCAACCTGGGAGCCTCGCTGACGCTGGAGCG
GCCCACGGGCAGCGCCATGGGCCATCTGACACCTGCGGAAGCCACGTTTT
TGCGATCGGTGGACGGGTGTGCTGGAGTGTTGCTTGCATTCAAGGTGCGT
CCATTCGTGCGGTTCCAGCAGGCGTCTGCAAGCGCTCTGGCGTTCGCCAA
GGCGATGGACGCTCTGTTCGTGTCGCAGCGGGAGCTGTTCCACTTCTCCC
CGCCGCCTCACCCGGCGATGCTGCTGGTGCTGGATCGCAAAGAAGACCCC
ATCACGCCTCTGCTCTATTTCATGTTACGACGTTGGATCAGGAGAGGAGT
GCGGTGAAGCACATGAAAGGGTTGGCTTTTCTTCGTGCGAACGCAGACAA
CCTGCGTCTGCTAAAGGAGGAGCTGCGTGACCCCAAGTGCAGCGAGTACC
ACCTCTTCTTCAGCAACATTCTGCCGGCAGGGTACCTGAATAAGCTGGCG
GAATGCGACGAGCGAAGCGTGGTGATGCAGGTGCAGGAGTTTTACGCGGA
TTTCTACCCGATCAACTCGGACCTGTTTTCGCTCAACCTGGGAGCCTCGC
TGACGCTGGAGCGGCCCACGGGCAGCGCCATGGGCCATCTGACACCTGCG
GAAGCCACGTTTTTGCGATCGGTGGACGGGTGTGCTGGAGTGTTGCTTGC
ATTCAAGGTGCGTCCATTCGTGCGGTTCCAGCAGGCGTCTGCAAGCGCTC
TGGCGTTCGCCAAGGCGATGGACGCTCTGTTCGTGTCGCAGCGGGAGCTG
TTCCACTTCTCCCCGCCGCCTCACCCGGCGATGCTGCTGGTGCTGGATCG
CAAAGAAGACCCCATCACGCCTCTGCTC
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