mRNA_M-pyrifera_M_contig90446.20975.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90446.20975.1
Unique NamemRNA_M-pyrifera_M_contig90446.20975.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig90446.20975.1 vs. uniprot
Match: Q6A1H9_SUBDO (Cathepsin X/O n=1 Tax=Suberites domuncula TaxID=55567 RepID=Q6A1H9_SUBDO)

HSP 1 Score: 104 bits (260), Expect = 3.740e-25
Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = 1 
Query:    4 GDGAMLSAMYQHGPLACSMFAHVDAFENYQGGIISDPTHFSPGNTTHVIRLVGWG--EEKGVKYWIGRNSYTANWGMSGDFYIARGNNTLNIESH-CGWV 294
            G+  M + ++  GP+ACS++AH  AFE Y GG+I DP  ++  +TTHV+ + GWG  E+ G+KYWIGRNS+   WG  G F + RG N L+IE H C W 
Sbjct:  197 GEDQMKAEVFARGPIACSVYAHSAAFEEYTGGVIHDPVQYN--STTHVVAVTGWGTDEKTGMKYWIGRNSFGTAWGEDGWFKLQRGVNALDIEKHTCAWA 294
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BLAST of mRNA_M-pyrifera_M_contig90446.20975.1 vs. uniprot
Match: A0A7S1C651_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C651_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 5.400e-23
Identity = 50/99 (50.51%), Postives = 66/99 (66.67%), Query Frame = 1 
Query:   13 AMLSAMYQHGPLACSMFAHVDAFENYQGGIISDPTHFSPGNTTHVIRLVGWGE-EKGVKYWIGRNSYTANWGMS---GDFYIARGNNTLNIESH-CGWV 294
            AM + ++  GP+ACS+ +  D+F+ Y+GG+I+D T  +   T HVI L GWGE E+GV YW+GRNSY   WG     G F IARGNNTL IE++ C W 
Sbjct:   49 AMQAEIFARGPIACSIASDPDSFDLYRGGVITDATPLNA--TDHVIVLAGWGETEEGVPYWVGRNSYGTRWGEGSGGGWFRIARGNNTLAIETYPCSWA 145
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BLAST of mRNA_M-pyrifera_M_contig90446.20975.1 vs. uniprot
Match: A0A7S3GGE4_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GGE4_9EUKA)

HSP 1 Score: 93.6 bits (231), Expect = 8.560e-22
Identity = 50/99 (50.51%), Postives = 58/99 (58.59%), Query Frame = 1 
Query:    4 GDGAMLSAMYQHGPLACSMFAHVDAFENYQGGIISDPTHFSPGNTT--HVIRLVGWGEEKGVKYWIGRNSYTANWGMSGDFYIARGNNTLNIESHCGWV 294
            G+  M++ +   GP+AC M    D FENY GGI  D T    G TT  H I + G+GEE GVKYWIGRNS+   WG SG F I RG N L IE  C W 
Sbjct:   92 GEEGMMAEIAARGPIACGMAVTKD-FENYSGGIFKDTT----GVTTQMHEISIAGYGEENGVKYWIGRNSWGTYWGESGWFRIVRGVNNLGIEDACDWA 185
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BLAST of mRNA_M-pyrifera_M_contig90446.20975.1 vs. uniprot
Match: A0A196S9I8_BLAHN (Cathepsin X n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S9I8_BLAHN)

HSP 1 Score: 97.4 bits (241), Expect = 1.640e-21
Identity = 48/97 (49.48%), Postives = 59/97 (60.82%), Query Frame = 1 
Query:    4 GDGAMLSAMYQHGPLACSMFAHVDAFENYQGGIISDPTHFSPGNTTHVIRLVGWGEEKGVKYWIGRNSYTANWGMSGDFYIARGNNTLNIESHCGWV 294
            G+  M+  +Y  GP+ C + A  D F+ Y+GGI  D T  S    +H I +VGWGEE GVKYWIGRNS+   WG +G F I RG N L IES C W 
Sbjct:  180 GEENMMKEIYARGPITCGI-ADPDTFKAYKGGIYKDTTGASM--VSHAISVVGWGEEDGVKYWIGRNSWGNYWGENGFFRIVRGENNLRIESDCQWA 273
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BLAST of mRNA_M-pyrifera_M_contig90446.20975.1 vs. uniprot
Match: A0A481SBB3_9CILI (Cathepsin 36 n=1 Tax=Philasterides dicentrarchi TaxID=282688 RepID=A0A481SBB3_9CILI)

HSP 1 Score: 97.4 bits (241), Expect = 1.670e-21
Identity = 48/98 (48.98%), Postives = 60/98 (61.22%), Query Frame = 1 
Query:    4 GDGAMLSAMYQHGPLACSMFAHVDAFENYQGGIISDPTHFSPGNTTHVIRLVGWGEEKGVKYWIGRNSYTANWGMSGDFYIARGNNTLNIESHCGWVE 297
            G+  M++ +YQ GP+AC       AF NY  GI  D T  +  + TH   +VGWGEE GVKYW+GRNS+ + WGM G F I RG N L IE+ C W E
Sbjct:  163 GELQMMNEIYQRGPIACGC-GTTRAFYNYTEGIFVDTTGVT--SLTHDCAVVGWGEENGVKYWLGRNSFGSYWGMKGMFKIIRGVNNLGIETDCSWAE 257
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BLAST of mRNA_M-pyrifera_M_contig90446.20975.1 vs. uniprot
Match: A0A7S3GGB8_9EUKA (Cathepsin X n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GGB8_9EUKA)

HSP 1 Score: 93.6 bits (231), Expect = 3.830e-20
Identity = 50/99 (50.51%), Postives = 58/99 (58.59%), Query Frame = 1 
Query:    4 GDGAMLSAMYQHGPLACSMFAHVDAFENYQGGIISDPTHFSPGNTT--HVIRLVGWGEEKGVKYWIGRNSYTANWGMSGDFYIARGNNTLNIESHCGWV 294
            G+  M++ +   GP+AC M    D FENY GGI  D T    G TT  H I + G+GEE GVKYWIGRNS+   WG SG F I RG N L IE  C W 
Sbjct:  478 GEEGMMAEIAARGPIACGMAVTKD-FENYSGGIFKDTT----GVTTQMHEISIAGYGEENGVKYWIGRNSWGTYWGESGWFRIVRGVNNLGIEDACDWA 571
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BLAST of mRNA_M-pyrifera_M_contig90446.20975.1 vs. uniprot
Match: A0A7S4J142_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J142_9EUKA)

HSP 1 Score: 86.7 bits (213), Expect = 5.080e-20
Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 1 
Query:   40 GPLACSMFAHVDAFENYQGGIISDPTHFSPGNTTHVIRLVGWGEEK-GVKYWIGRNSYTANWGMSGDFYIARGNNTLNIESH-CGWV 294
            GP+ACSM+AH DAFE Y GG+I D T +    TTHV+ + GWG    GV +WI RNS+  NWG  G +    G +  N+E++ C W 
Sbjct:    5 GPIACSMYAHADAFEKYAGGVIRDTTRYK--GTTHVVVVAGWGRTADGVPFWIVRNSFGTNWGELGWYRAELGKDIYNMEANDCSWA 89
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BLAST of mRNA_M-pyrifera_M_contig90446.20975.1 vs. uniprot
Match: A0A1Y1IFI8_KLENI (Cathepsin X n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFI8_KLENI)

HSP 1 Score: 90.5 bits (223), Expect = 4.780e-19
Identity = 46/97 (47.42%), Postives = 58/97 (59.79%), Query Frame = 1 
Query:    4 GDGAMLSAMYQHGPLACSMFAHVDAFENYQGGIISDPTHFSPGNTTHVIRLVGWGEEKGVKYWIGRNSYTANWGMSGDFYIARGNNTLNIESHCGWV 294
            G+ AML+ +   GP+AC M    + FE Y GGI +D T  +  +  H I + G+GEE GVKYWIGRNS+   WG  G F I RG N L IE+ C W 
Sbjct:  580 GEEAMLAEITARGPMACGMCVTPE-FEAYSGGIFNDTTGCTEED--HDISIAGFGEENGVKYWIGRNSWGTYWGEGGWFRIVRGTNNLGIENRCDWA 673
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BLAST of mRNA_M-pyrifera_M_contig90446.20975.1 vs. uniprot
Match: D8M0P0_BLAHO (Cathepsin X n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M0P0_BLAHO)

HSP 1 Score: 89.0 bits (219), Expect = 1.600e-18
Identity = 45/97 (46.39%), Postives = 55/97 (56.70%), Query Frame = 1 
Query:    4 GDGAMLSAMYQHGPLACSMFAHVDAFENYQGGIISDPTHFSPGNTTHVIRLVGWGEEKGVKYWIGRNSYTANWGMSGDFYIARGNNTLNIESHCGWV 294
            G+  M+  +Y  GP+ C +    D F +Y+GGI  D +        H I +VGWGEE G KYWIGRNS+   WG  G F IARG N L IES C W 
Sbjct:  181 GEENMMKEIYARGPITCGIAVPQD-FVDYKGGIYKDES--GAVEKVHAISVVGWGEENGEKYWIGRNSWGNYWGEEGWFRIARGINNLAIESECQWA 274
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BLAST of mRNA_M-pyrifera_M_contig90446.20975.1 vs. uniprot
Match: I0YVT7_COCSC (Cysteine proteinase n=2 Tax=Trebouxiophyceae TaxID=75966 RepID=I0YVT7_COCSC)

HSP 1 Score: 87.8 bits (216), Expect = 2.760e-18
Identity = 42/98 (42.86%), Postives = 58/98 (59.18%), Query Frame = 1 
Query:    7 DGAMLSAMYQHGPLACSMFAHVDAFENYQGGIISDPTHFSPGNTTHVIRLVGWGEEKGVKYWIGRNSYTANWGMSGDFYIARGNNTLNIE-SHCGWVE 297
            + AM+S +YQ GP+ CS+    D    Y+GGI  DP +++     H + + GWGEE GV +WI RNS+   WG  G F I RG N+L +E S C + E
Sbjct:  211 ESAMMSEIYQRGPIVCSISTPEDFTYGYRGGIYKDPLNYTRETVDHNVEVTGWGEEHGVPFWIVRNSWGTFWGEMGFFRIERGINSLFLEDSDCWYAE 308
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90446.20975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q6A1H9_SUBDO3.740e-2548.00Cathepsin X/O n=1 Tax=Suberites domuncula TaxID=55... [more]
A0A7S1C651_9STRA5.400e-2350.51Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3GGE4_9EUKA8.560e-2250.51Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A196S9I8_BLAHN1.640e-2149.48Cathepsin X n=1 Tax=Blastocystis sp. subtype 1 (st... [more]
A0A481SBB3_9CILI1.670e-2148.98Cathepsin 36 n=1 Tax=Philasterides dicentrarchi Ta... [more]
A0A7S3GGB8_9EUKA3.830e-2050.51Cathepsin X n=2 Tax=Palpitomonas bilix TaxID=65283... [more]
A0A7S4J142_9EUKA5.080e-2047.13Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A1Y1IFI8_KLENI4.780e-1947.42Cathepsin X n=1 Tax=Klebsormidium nitens TaxID=105... [more]
D8M0P0_BLAHO1.600e-1846.39Cathepsin X n=1 Tax=Blastocystis hominis TaxID=129... [more]
I0YVT7_COCSC2.760e-1842.86Cysteine proteinase n=2 Tax=Trebouxiophyceae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90446contigM-pyrifera_M_contig90446:16..318 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score118.6
Seed ortholog evalue1.7e-24
Seed eggNOG ortholog400682.PAC_15721518
Preferred nameCTSZ
KEGG koko:K08568
KEGG Pathwayko04142,ko04210,map04142,map04210
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000323,GO:0001763,GO:0001775,GO:0001990,GO:0001991,GO:0002002,GO:0002003,GO:0002009,GO:0002119,GO:0002164,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003006,GO:0003008,GO:0003013,GO:0003044,GO:0003073,GO:0003081,GO:0003674,GO:0003824,GO:0004175,GO:0004180,GO:0004197,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005783,GO:0005788,GO:0005793,GO:0005798,GO:0005886,GO:0005938,GO:0006508,GO:0006518,GO:0006807,GO:0006810,GO:0006887,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006955,GO:0006996,GO:0007275,GO:0007399,GO:0007548,GO:0008015,GO:0008150,GO:0008152,GO:0008217,GO:0008233,GO:0008234,GO:0008238,GO:0008284,GO:0008406,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009886,GO:0009887,GO:0009888,GO:0009892,GO:0009986,GO:0009987,GO:0010171,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0010721,GO:0010755,GO:0010757,GO:0010817,GO:0010941,GO:0010942,GO:0010955,GO:0010975,GO:0010977,GO:0012505,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016485,GO:0016486,GO:0016787,GO:0018996,GO:0019222,GO:0019538,GO:0022008,GO:0022404,GO:0022414,GO:0022607,GO:0030134,GO:0030135,GO:0030141,GO:0030154,GO:0030162,GO:0030163,GO:0030323,GO:0030324,GO:0030424,GO:0030426,GO:0030427,GO:0031012,GO:0031090,GO:0031323,GO:0031324,GO:0031344,GO:0031345,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032091,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032940,GO:0033116,GO:0033267,GO:0034641,GO:0034774,GO:0035239,GO:0035262,GO:0035295,GO:0035580,GO:0036230,GO:0040025,GO:0040032,GO:0042119,GO:0042127,GO:0042303,GO:0042395,GO:0042445,GO:0042581,GO:0042981,GO:0042995,GO:0043005,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043393,GO:0043523,GO:0043525,GO:0043603,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044421,GO:0044422,GO:0044424,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044463,GO:0044464,GO:0045055,GO:0045137,GO:0045321,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0045861,GO:0046903,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048569,GO:0048608,GO:0048699,GO:0048729,GO:0048731,GO:0048754,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050886,GO:0050896,GO:0051093,GO:0051098,GO:0051100,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051603,GO:0051604,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051960,GO:0051961,GO:0060102,GO:0060205,GO:0060255,GO:0060284,GO:0060425,GO:0060429,GO:0060441,GO:0060541,GO:0060562,GO:0061024,GO:0061138,GO:0061458,GO:0062023,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070011,GO:0070013,GO:0070613,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090114,GO:0097458,GO:0097708,GO:0098588,GO:0099503,GO:0099568,GO:0099738,GO:0101002,GO:0120025,GO:0120035,GO:0120038,GO:0140096,GO:0150034,GO:1901214,GO:1901216,GO:1901564,GO:1901565,GO:1901575,GO:1903317,GO:1903318,GO:1904813,GO:2000026,GO:2000177,GO:2000179
EggNOG free text desc.Belongs to the peptidase C1 family
EggNOG OGs38FXY@33154,3BJJC@33208,COG4870@1,KOG1543@2759
EC3.4.18.1
COG Functional cat.O
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons1
Model size303
Cds size303
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816816.6456614-CDS-M-pyrifera_M_contig90446:15..3181622816816.6456614-CDS-M-pyrifera_M_contig90446:15..318Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90446 16..318 +
1692278195.4759505-CDS-M-pyrifera_M_contig90446:15..3181692278195.4759505-CDS-M-pyrifera_M_contig90446:15..318Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90446 16..318 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90446.20975.1prot_M-pyrifera_M_contig90446.20975.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90446 16..318 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90446.20975.1

>prot_M-pyrifera_M_contig90446.20975.1 ID=prot_M-pyrifera_M_contig90446.20975.1|Name=mRNA_M-pyrifera_M_contig90446.20975.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp
MGDGAMLSAMYQHGPLACSMFAHVDAFENYQGGIISDPTHFSPGNTTHVI
RLVGWGEEKGVKYWIGRNSYTANWGMSGDFYIARGNNTLNIESHCGWVEV
*
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mRNA from alignment at M-pyrifera_M_contig90446:16..318+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90446.20975.1 ID=mRNA_M-pyrifera_M_contig90446.20975.1|Name=mRNA_M-pyrifera_M_contig90446.20975.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=303bp|location=Sequence derived from alignment at M-pyrifera_M_contig90446:16..318+ (Macrocystis pyrifera P11B4 male)
ATGGGAGACGGGGCGATGCTCAGCGCAATGTATCAGCATGGACCATTGGC
ATGCTCCATGTTCGCCCATGTAGATGCGTTTGAAAACTACCAAGGTGGTA
TAATCTCTGACCCTACTCACTTTTCGCCTGGCAATACTACCCATGTGATC
CGACTCGTGGGTTGGGGTGAAGAGAAAGGGGTCAAGTATTGGATTGGTCG
CAACTCTTACACAGCAAATTGGGGCATGTCCGGTGATTTTTACATCGCCA
GAGGAAACAATACCCTTAACATTGAGTCCCACTGTGGCTGGGTCGAAGTA
TGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90446:16..318+

>mRNA_M-pyrifera_M_contig90446.20975.1 ID=mRNA_M-pyrifera_M_contig90446.20975.1|Name=mRNA_M-pyrifera_M_contig90446.20975.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=606bp|location=Sequence derived from alignment at M-pyrifera_M_contig90446:16..318+ (Macrocystis pyrifera P11B4 male)
ATGGGAGACGGGGCGATGCTCAGCGCAATGTATCAGCATGGACCATTGGC
ATGCTCCATGTTCGCCCATGTAGATGCGTTTGAAAACTACCAAGGTGGTA
TAATCTCTGACCCTACTCACTTTTCGCCTGGCAATACTACCCATGTGATC
CGACTCGTGGGTTGGGGTGAAGAGAAAGGGGTCAAGTATTGGATTGGTCG
CAACTCTTACACAGCAAATTGGGGCATGTCCGGTGATTTTTACATCGCCA
GAGGAAACAATACCCTTAACATTGAGTCCCACTGTGGCTGGGTCGAAGTA
TGAATGGGAGACGGGGCGATGCTCAGCGCAATGTATCAGCATGGACCATT
GGCATGCTCCATGTTCGCCCATGTAGATGCGTTTGAAAACTACCAAGGTG
GTATAATCTCTGACCCTACTCACTTTTCGCCTGGCAATACTACCCATGTG
ATCCGACTCGTGGGTTGGGGTGAAGAGAAAGGGGTCAAGTATTGGATTGG
TCGCAACTCTTACACAGCAAATTGGGGCATGTCCGGTGATTTTTACATCG
CCAGAGGAAACAATACCCTTAACATTGAGTCCCACTGTGGCTGGGTCGAA
GTATGA
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