mRNA_M-pyrifera_M_contig90278.20929.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90278.20929.1
Unique NamemRNA_M-pyrifera_M_contig90278.20929.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90278.20929.1 vs. uniprot
Match: A0A7K1Z600_9ACTN (MFS transporter n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z600_9ACTN)

HSP 1 Score: 417 bits (1073), Expect = 3.870e-139
Identity = 215/264 (81.44%), Postives = 242/264 (91.67%), Query Frame = 1
Query:    1 WAFYLLAIPPVLVGIASFIMKEPRRGQNEQEALLTDDAVEVDELEPSMSTALARLRKIRTFYFFATGVGVLGFALIAVPTQFNLLLDDKYGLDALDRGIVEALLWVPSLVAIPFAGKAFDKKFREDPEAMVRFTGGLIIAAGAIYLVALPIKVLWLLVLLVGLAQACISSAFVAAPTIIASVAPYRIRAQAFALLPVFIFLMGGFIGGVVAGQISDAYNNRTAMILLAPWTAMLGGWLIRRGAFHIRRDISLAVEELLEEQEEA 792
            WAFYL+AIPPVLVG+AS  MKEP RG+NEQ A+L D+A++V+ELE SMSTALARLRK+RTFYF ATGVGVLGFALIAVP QFNL+L+DKYGLDALDRGIVE+LLW+P+L+ IP AG+ FD+KFREDPEA+V+ TG LIIAAG +Y VALPIK L LL+ LVGLAQA IS+AFVAAPTIIA V+PYRIRAQAFALLPVFIFLMGGFIGG++AGQISDAYNNRTAMI+LAP+TAMLGGWLIRRGA HIRRDISLAVEELLEEQ EA
Sbjct:  232 WAFYLMAIPPVLVGLASLGMKEPARGKNEQTAVLEDEAIDVEELEASMSTALARLRKVRTFYFLATGVGVLGFALIAVPGQFNLMLEDKYGLDALDRGIVESLLWIPALIGIPLAGRVFDRKFREDPEAVVKLTGSLIIAAGLVYFVALPIKTLGLLLFLVGLAQALISAAFVAAPTIIALVSPYRIRAQAFALLPVFIFLMGGFIGGLIAGQISDAYNNRTAMIILAPYTAMLGGWLIRRGAGHIRRDISLAVEELLEEQSEA 495          
BLAST of mRNA_M-pyrifera_M_contig90278.20929.1 vs. uniprot
Match: A0A7X5WQ09_9ACTN (MFS transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WQ09_9ACTN)

HSP 1 Score: 400 bits (1027), Expect = 3.480e-133
Identity = 202/263 (76.81%), Postives = 241/263 (91.63%), Query Frame = 1
Query:    1 WAFYLLAIPPVLVGIASFIMKEPRRGQNEQEALLTDDAVEVDELEPSMSTALARLRKIRTFYFFATGVGVLGFALIAVPTQFNLLLDDKYGLDALDRGIVEALLWVPSLVAIPFAGKAFDKKFREDPEAMVRFTGGLIIAAGAIYLVALPIKVLWLLVLLVGLAQACISSAFVAAPTIIASVAPYRIRAQAFALLPVFIFLMGGFIGGVVAGQISDAYNNRTAMILLAPWTAMLGGWLIRRGAFHIRRDISLAVEELLEEQEE 789
            WAF+++AIPPVLVG+AS  MKEP RG+ EQEALL ++ +EV+ELEPSMSTALARLRKIRTFYF ATGVGVLGFALIA+P+QFNLLL+DKYGLDALDRGIVE+L+WV SLVAIP AG+ FD+KFREDPEAMV+ TGGLI++AG +Y++ALP+K L +LV  + +AQA IS++FVAAPTIIA+V+PYRIRAQAFALLPVFIFLMGGF GG+++GQ+SDAYNNRTAM+++AP  A++GGWLIRRGA HIRRDISLAVEELLEEQEE
Sbjct:  208 WAFFVVAIPPVLVGLASIRMKEPPRGRFEQEALLGEEVLEVEELEPSMSTALARLRKIRTFYFLATGVGVLGFALIAIPSQFNLLLEDKYGLDALDRGIVESLMWVASLVAIPIAGRVFDRKFREDPEAMVKMTGGLIMSAGLVYVIALPMKALGVLVAAIAVAQALISASFVAAPTIIAAVSPYRIRAQAFALLPVFIFLMGGFFGGLISGQLSDAYNNRTAMLVIAPPAALIGGWLIRRGAHHIRRDISLAVEELLEEQEE 470          
BLAST of mRNA_M-pyrifera_M_contig90278.20929.1 vs. uniprot
Match: A0A2E0T065_9ACTN (ABC transporter n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T065_9ACTN)

HSP 1 Score: 334 bits (856), Expect = 8.950e-107
Identity = 175/265 (66.04%), Postives = 216/265 (81.51%), Query Frame = 1
Query:    1 WAFYLLAIPPVLVGIASFIMKEPRRGQNEQEALLT-DDAVEVDELEPSMSTALARLRKIRTFYFFATGVGVLGFALIAVPTQFNLLLDDKYGLDALDRGIVEALLWVPSLVAIPFAGKAFDKKFREDPEAMVRFTGGLIIAAGAIYLVALPIKVLWLLVLLVGLAQACISSAFVAAPTIIASVAPYRIRAQAFALLPVFIFLMGGFIGGVVAGQISDAYNNRTAMILLAPWTAMLGGWLIRRGAFHIRRDISLAVEELLEEQEEA 792
            +AF++LA+PPVL+G+A+  ++EP RG+ EQ+A+L+ +DA++VDELEPSMSTA ARLRKIRTFY  ATG+GV+GFALI VP QFNLLLD KYGLDAL+RGIVE+L+W+ SLV+IP AG+ F +KFREDP+++VR  G LI+AAG +YLV LP+K L LL+                   IIA+V+PYRIR QAFALLPVFIFLMGGF GG++ GQISD Y+NRTAM++L P  A+LGGWLIRRGA HIRRDISL+VEELLEEQEEA
Sbjct:  219 YAFFVLAVPPVLLGLAALRLREPERGRFEQDAVLSGEDALDVDELEPSMSTAFARLRKIRTFYALATGIGVVGFALIVVPGQFNLLLDRKYGLDALERGIVESLIWLGSLVSIPIAGRVFGRKFREDPDSVVRIMGTLIMAAGLLYLVVLPVKTLGLLIXXXXXXXXXXXXXXXXXXMIIAAVSPYRIRTQAFALLPVFIFLMGGFFGGLLGGQISDVYSNRTAMLILGPPGALLGGWLIRRGARHIRRDISLSVEELLEEQEEA 483          
BLAST of mRNA_M-pyrifera_M_contig90278.20929.1 vs. uniprot
Match: A0A2D8LST1_9ACTN (ABC transporter n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LST1_9ACTN)

HSP 1 Score: 324 bits (831), Expect = 9.240e-103
Identity = 171/265 (64.53%), Postives = 208/265 (78.49%), Query Frame = 1
Query:    1 WAFYLLAIPPVLVGIASFIMKEPRRGQNEQEALLT-DDAVEVDELEPSMSTALARLRKIRTFYFFATGVGVLGFALIAVPTQFNLLLDDKYGLDALDRGIVEALLWVPSLVAIPFAGKAFDKKFREDPEAMVRFTGGLIIAAGAIYLVALPIKVLWLLVLLVGLAQACISSAFVAAPTIIASVAPYRIRAQAFALLPVFIFLMGGFIGGVVAGQISDAYNNRTAMILLAPWTAMLGGWLIRRGAFHIRRDISLAVEELLEEQEEA 792
            WA+++LA+PPVL+GI +  + EP RG+ EQEA+L+ +DA++VDELEPSMSTA ARLRKIRTFY  ATG+GV+GFALI VP QFNLLLD KY LDAL+RGIVE+L+W+ SL+AIP AG+ F +KFREDP+++VR  G LI+AAG +YLV LPIK                         IIA+V+PYRIR QAF+LLPVFIFLMGGF GGV+ GQISD Y NRTAM++L P  A++GGWLIRRGA HIRRDISL+VEE+LEEQEEA
Sbjct:  248 WAYFILALPPVLLGIFALRLSEPERGRFEQEAVLSGEDALDVDELEPSMSTAFARLRKIRTFYALATGIGVVGFALIVVPGQFNLLLDRKYALDALERGIVESLIWLGSLIAIPIAGRVFGRKFREDPDSVVRIMGTLIMAAGIVYLVVLPIKXXXXXXXXXXXXXXXXXXXXXXXXXIIAAVSPYRIRTQAFSLLPVFIFLMGGFGGGVLGGQISDVYGNRTAMLILGPPGALIGGWLIRRGAHHIRRDISLSVEEMLEEQEEA 512          
BLAST of mRNA_M-pyrifera_M_contig90278.20929.1 vs. uniprot
Match: A0A6B1EDP7_9ACTN (MFS transporter n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EDP7_9ACTN)

HSP 1 Score: 310 bits (793), Expect = 2.390e-97
Identity = 160/263 (60.84%), Postives = 209/263 (79.47%), Query Frame = 1
Query:    4 AFYLLAIPPVLVGIAS-FIMKEPRRGQNEQEALLTDDAVEVDELEPSMSTALARLRKIRTFYFFATGVGVLGFALIAVPTQFNLLLDDKYGLDALDRGIVEALLWVPSLVAIPFAGKAFDKKFREDPEAMVRFTGGLIIAAGAIYLVALPIKVLWLLVLLVGLAQACISSAFVAAPTIIASVAPYRIRAQAFALLPVFIFLMGGFIGGVVAGQISDAYNNRTAMILLAPWTAMLGGWLIRRGAFHIRRDISLAVEELLEEQEE 789
            AF+ +A+ PV+V + S  +++EP RG+ E++A+  D+ V+V+EL  S+ TA ARLRKI+TFY+  TGVGVLGFALIA+P QFNLLL+DKY +    RG+VE+L+WV +LV +P AG+ FD+ FR DP AM+R +G L++AAG  Y VALPIK+L  LVL++ +AQ  IS AFVA P++IA+V+PYRIRAQAFALLPVFIFLMGGF GG++ GQ+SDAYN RTAM++ AP  A++GG LI  G+  IRRDIS AVEEL+EEQEE
Sbjct:  226 AFFAVAVAPVVVAVVSAIVLREPPRGRFEKQAVFGDEQVDVEELPVSIGTAFARLRKIKTFYYLTTGVGVLGFALIAIPIQFNLLLEDKYAMGPFQRGVVESLIWVAALVGLPVAGRLFDRGFRRDPSAMMRLSGILVMAAGVTYAVALPIKILGGLVLMIAVAQTLISMAFVAVPSVIAAVSPYRIRAQAFALLPVFIFLMGGFFGGLIVGQLSDAYNERTAMLVAAPPAALIGGALIAYGSRFIRRDISRAVEELVEEQEE 488          
BLAST of mRNA_M-pyrifera_M_contig90278.20929.1 vs. uniprot
Match: A0A6N9ET56_9ACTN (MFS transporter n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9ET56_9ACTN)

HSP 1 Score: 306 bits (784), Expect = 5.170e-96
Identity = 158/263 (60.08%), Postives = 208/263 (79.09%), Query Frame = 1
Query:    4 AFYLLAIPPVLVGIAS-FIMKEPRRGQNEQEALLTDDAVEVDELEPSMSTALARLRKIRTFYFFATGVGVLGFALIAVPTQFNLLLDDKYGLDALDRGIVEALLWVPSLVAIPFAGKAFDKKFREDPEAMVRFTGGLIIAAGAIYLVALPIKVLWLLVLLVGLAQACISSAFVAAPTIIASVAPYRIRAQAFALLPVFIFLMGGFIGGVVAGQISDAYNNRTAMILLAPWTAMLGGWLIRRGAFHIRRDISLAVEELLEEQEE 789
            AF+ +A  P++V + S  +++EP RG  E+ A+  ++ VEV+EL  S+ TA ARLRKI+TFYF +TGVGVLGFALIA+P QFNLLL+DKY +    RG+VE+ +WV +LV +PFAG+ FD+ FR DP AM+R  G L++A+G +Y VALPIK+L  LV+++ LAQ  IS AFVAAP++IA+V+P+RIRAQAFALLPVFIFLMGGF GG++ GQ+SDAYN RTAM++ AP  A++GG LI  G+  IRRDIS +VEELLEE+EE
Sbjct:  226 AFFAVAAAPLVVAVVSALVLREPERGYYEKRAVFGEEQVEVEELPVSIGTAFARLRKIKTFYFLSTGVGVLGFALIAIPIQFNLLLEDKYAMGPFQRGVVESCIWVAALVGLPFAGRIFDRGFRRDPAAMMRMAGLLVMASGVVYAVALPIKILGGLVVMMALAQTLISMAFVAAPSVIAAVSPHRIRAQAFALLPVFIFLMGGFFGGLIVGQLSDAYNERTAMLVAAPPAALIGGALIAHGSRFIRRDISRSVEELLEEREE 488          
BLAST of mRNA_M-pyrifera_M_contig90278.20929.1 vs. uniprot
Match: A0A7K2DCG4_9ACTN (MFS transporter n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2DCG4_9ACTN)

HSP 1 Score: 302 bits (773), Expect = 6.240e-94
Identity = 158/263 (60.08%), Postives = 207/263 (78.71%), Query Frame = 1
Query:    4 AFYLLAIPPVLVGIAS-FIMKEPRRGQNEQEALLTDDAVEVDELEPSMSTALARLRKIRTFYFFATGVGVLGFALIAVPTQFNLLLDDKYGLDALDRGIVEALLWVPSLVAIPFAGKAFDKKFREDPEAMVRFTGGLIIAAGAIYLVALPIKVLWLLVLLVGLAQACISSAFVAAPTIIASVAPYRIRAQAFALLPVFIFLMGGFIGGVVAGQISDAYNNRTAMILLAPWTAMLGGWLIRRGAFHIRRDISLAVEELLEEQEE 789
            AF+ +A  PV+  I S  +++EP RG+ E+EA+  D+ V+V+EL  S+ TA ARLRKI+TFY+ ++GVGVLGFALIA+P QFNLLL+DKY +   +RG+VE+L+WV +L+ +P AG+ FD+ FR DP AM+R  G L++A G IY VALP+K+L  LV L+ LAQ  IS AFVAAP++IA+V+PYRIRAQAFALLPVFIFLMGGF GG++ GQ+SDAYN RTAM++ AP  A++GG LI  G+  IR DIS +VEELLEE+EE
Sbjct:  275 AFFAVAAGPVVAAIVSALVLREPPRGRFEKEAVFGDERVQVEELPVSIGTAFARLRKIKTFYYLSSGVGVLGFALIAIPIQFNLLLEDKYAMGPFERGVVESLIWVAALIGLPVAGRLFDRGFRRDPAAMMRLAGMLVMATGVIYAVALPMKILGGLVALMALAQTLISMAFVAAPSVIAAVSPYRIRAQAFALLPVFIFLMGGFFGGLIVGQLSDAYNERTAMLVAAPPAALIGGALIAYGSRFIRFDISRSVEELLEEREE 537          
BLAST of mRNA_M-pyrifera_M_contig90278.20929.1 vs. uniprot
Match: A0A6B0ZJ15_9ACTN (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZJ15_9ACTN)

HSP 1 Score: 272 bits (696), Expect = 8.170e-86
Identity = 142/217 (65.44%), Postives = 176/217 (81.11%), Query Frame = 1
Query:  139 SMSTALARLRKIRTFYFFATGVGVLGFALIAVPTQFNLLLDDKYGLDALDRGIVEALLWVPSLVAIPFAGKAFDKKFREDPEAMVRFTGGLIIAAGAIYLVALPIKVLWLLVLLVGLAQACISSAFVAAPTIIASVAPYRIRAQAFALLPVFIFLMGGFIGGVVAGQISDAYNNRTAMILLAPWTAMLGGWLIRRGAFHIRRDISLAVEELLEEQEE 789
            S+ TA ARLRKI+TFY+ ++GVGVLGFALIA+P QFNLLL+DKY L   +RG+VE+L+WV +LV +P AG+ FD+ FR DP AM+R  G L++A G IY VALPIK+L  LV L+ LAQ  IS AFVAAP++IA+V+PYRIRAQAFALLPVFIFLMGGF GG++ GQ+SDAYN RTAM++ AP  A++GG LI  G+  IR DIS +VEELLEE+EE
Sbjct:    1 SIGTAFARLRKIKTFYYLSSGVGVLGFALIAIPIQFNLLLEDKYALGPFERGVVESLIWVAALVGLPVAGRLFDRGFRRDPAAMMRLAGMLVMATGVIYAVALPIKILGGLVALMALAQTLISMAFVAAPSVIAAVSPYRIRAQAFALLPVFIFLMGGFFGGLIVGQLSDAYNERTAMLVAAPPAALIGGALIAYGSRFIRLDISRSVEELLEEREE 217          
BLAST of mRNA_M-pyrifera_M_contig90278.20929.1 vs. uniprot
Match: A0A7K2DTH3_9ACTN (MFS transporter n=3 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2DTH3_9ACTN)

HSP 1 Score: 271 bits (694), Expect = 1.110e-82
Identity = 144/266 (54.14%), Postives = 192/266 (72.18%), Query Frame = 1
Query:    1 WAFYLLAIPPVLVGIASFIMKEPRRGQNEQEALLTDDAVEV---DELEPSMSTALARLRKIRTFYFFATGVGVLGFALIAVPTQFNLLLDDKYGLDALDRGIVEALLWVPSLVAIPFAGKAFDKKFREDPEAMVRFTGGLIIAAGAIYLVALPIKVLWLLVLLVGLAQACISSAFVAAPTIIASVAPYRIRAQAFALLPVFIFLMGGFIGGVVAGQISDAYNNRTAMILLAPWTAMLGGWLIRRGAFHIRRDISLAVEELLEEQEE 789
            WAFY+ AIPP+++ + S ++KEP R  NEQ+A+L +         +L  SMSTA ARL+K++TFYF A GVG LGFAL+ +P+Q NL+L D+YG +A  RG V +L+W+ SLVAIP +G  FD  FREDP  MVR  G LII +G + LVA+      +++  + LA AC S AFVAA   I +VAPYR+RAQAFALLPVFIFLMGGF+G ++AG ISDA+  R A+ ++AP  +++GG L+  G+ +I+RDISLAV EL+EEQEE
Sbjct:  228 WAFYIFAIPPIVLALVSLLLKEPPRAGNEQQAILGEQYEMPPIGSDLPVSMSTAFARLKKVKTFYFLAVGVGTLGFALVTLPSQLNLMLKDEYGYEAFQRGWVTSLVWLASLVAIPISGFKFDGMFREDPTKMVRTAGTLIIMSGVLVLVAMRFHQPAIMIFGISLANACTSGAFVAAAPTIGAVAPYRMRAQAFALLPVFIFLMGGFMGSIIAGSISDAHGERLAISIVAPPASIIGGLLVAYGSRYIKRDISLAVSELVEEQEE 493          
BLAST of mRNA_M-pyrifera_M_contig90278.20929.1 vs. uniprot
Match: A0A6J6U7Z0_9ZZZZ (Unannotated protein n=3 Tax=root TaxID=1 RepID=A0A6J6U7Z0_9ZZZZ)

HSP 1 Score: 249 bits (637), Expect = 3.240e-74
Identity = 139/267 (52.06%), Postives = 187/267 (70.04%), Query Frame = 1
Query:    1 WAFYLLAIPPVLVGIASFIMKEPRRGQNEQEALL---TDDAVEVDELEPSMSTALARLRKIRTFYFFATGVGVLGFALIAVPTQFNLLLDDKYGLDALDRGIVEALLWVPSLVAIPFAGKAFDKKFREDPEAMVRFTGGLIIAAGAIYLVALPIK-VLWLLVLLVGLAQACISSAFVAAPTIIASVAPYRIRAQAFALLPVFIFLMGGFIGGVVAGQISDAYNNRTAMILLAPWTAMLGGWLIRRGAFHIRRDISLAVEELLEEQEE 789
            WAF + ++P  L+ + S  +KEP+RG++EQE +L    D      ++  SMS A ARL+KI+TF++   G+G LGFAL+AVP Q +LLL++ YG DA  RG + +L W+ S+VAIPFA +A+DK FR +P  MVR  G LI   G + LVAL     LW++   + LA AC S+AFV     I +VAPYR+RAQAFAL+PVFIFLMGGF GG++AG ISDA + RTA+ ++AP  A++GG L   G+  ++RDISLAVEELLEEQ+E
Sbjct:  244 WAFVVFSLPLALLSMLSLALKEPKRGRHEQEMVLGKELDPPPIGSQIPVSMSAAYARLKKIKTFFYICVGIGTLGFALVAVPVQLSLLLENDYGYDAFKRGWMLSLTWLASIVAIPFAARAYDKAFRSNPTRMVRIGGALIAMYGVLMLVALRFHDPLWMIAG-ISLANACTSAAFVCVGPTIGAVAPYRMRAQAFALVPVFIFLMGGFFGGLIAGAISDANDERTALTVVAPPAAIIGGALFVYGSRFLKRDISLAVEELLEEQDE 509          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90278.20929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1Z600_9ACTN3.870e-13981.44MFS transporter n=2 Tax=Acidimicrobiaceae bacteriu... [more]
A0A7X5WQ09_9ACTN3.480e-13376.81MFS transporter n=1 Tax=Actinomycetia bacterium Ta... [more]
A0A2E0T065_9ACTN8.950e-10766.04ABC transporter n=5 Tax=Acidimicrobiaceae bacteriu... [more]
A0A2D8LST1_9ACTN9.240e-10364.53ABC transporter n=1 Tax=Acidimicrobiaceae bacteriu... [more]
A0A6B1EDP7_9ACTN2.390e-9760.84MFS transporter n=1 Tax=Acidimicrobiaceae bacteriu... [more]
A0A6N9ET56_9ACTN5.170e-9660.08MFS transporter n=1 Tax=Acidimicrobiaceae bacteriu... [more]
A0A7K2DCG4_9ACTN6.240e-9460.08MFS transporter n=6 Tax=Acidimicrobiaceae bacteriu... [more]
A0A6B0ZJ15_9ACTN8.170e-8665.44ATP-binding cassette domain-containing protein (Fr... [more]
A0A7K2DTH3_9ACTN1.110e-8254.14MFS transporter n=3 Tax=Acidimicrobiia bacterium T... [more]
A0A6J6U7Z0_9ZZZZ3.240e-7452.06Unannotated protein n=3 Tax=root TaxID=1 RepID=A0A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90278contigM-pyrifera_M_contig90278:2..793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score161.0
Seed ortholog evalue7.6e-37
Seed eggNOG ortholog330084.JNYZ01000037_gene8032
Preferred namenorB
KEGG koko:K08166,ko:K08170
KEGG TC2.A.1.3.10,2.A.1.3.23,2.A.1.3.59
KEGG ModuleM00702
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
EggNOG free text desc.transmembrane transporter activity
EggNOG OGsCOG2271@1,COG2271@2
COG Functional cat.G
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko01504,ko02000
Exons1
Model size792
Cds size792
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816814.483133-CDS-M-pyrifera_M_contig90278:1..7931622816814.483133-CDS-M-pyrifera_M_contig90278:1..793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90278 2..793 -
1692278194.3218603-CDS-M-pyrifera_M_contig90278:1..7931692278194.3218603-CDS-M-pyrifera_M_contig90278:1..793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90278 2..793 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90278.20929.1prot_M-pyrifera_M_contig90278.20929.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90278 2..793 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90278.20929.1

>prot_M-pyrifera_M_contig90278.20929.1 ID=prot_M-pyrifera_M_contig90278.20929.1|Name=mRNA_M-pyrifera_M_contig90278.20929.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=264bp
WAFYLLAIPPVLVGIASFIMKEPRRGQNEQEALLTDDAVEVDELEPSMST
ALARLRKIRTFYFFATGVGVLGFALIAVPTQFNLLLDDKYGLDALDRGIV
EALLWVPSLVAIPFAGKAFDKKFREDPEAMVRFTGGLIIAAGAIYLVALP
IKVLWLLVLLVGLAQACISSAFVAAPTIIASVAPYRIRAQAFALLPVFIF
LMGGFIGGVVAGQISDAYNNRTAMILLAPWTAMLGGWLIRRGAFHIRRDI
SLAVEELLEEQEEA
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mRNA from alignment at M-pyrifera_M_contig90278:2..793-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90278.20929.1 ID=mRNA_M-pyrifera_M_contig90278.20929.1|Name=mRNA_M-pyrifera_M_contig90278.20929.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig90278:2..793- (Macrocystis pyrifera P11B4 male)
TGGGCCTTTTACCTCCTCGCCATCCCGCCCGTCCTCGTGGGAATCGCCTC GTTCATCATGAAGGAGCCCCGCCGGGGTCAGAACGAGCAGGAGGCCCTGC TCACCGACGACGCCGTCGAGGTCGACGAACTCGAACCATCCATGAGCACG GCGCTGGCCCGGCTCCGCAAGATCCGCACCTTCTACTTCTTCGCCACCGG CGTCGGCGTGCTCGGGTTCGCACTCATCGCCGTGCCCACCCAGTTCAATC TGCTCCTCGACGACAAGTACGGTCTCGATGCGCTCGATCGCGGCATCGTC GAAGCCCTCTTGTGGGTGCCCTCGCTCGTCGCCATTCCGTTCGCGGGCAA GGCGTTCGACAAGAAGTTCCGTGAAGACCCCGAAGCGATGGTCAGGTTCA CCGGCGGGCTCATCATCGCCGCCGGCGCGATCTATCTGGTGGCCCTGCCC ATCAAGGTGCTGTGGCTGCTCGTGCTCCTCGTCGGGCTCGCCCAGGCGTG CATCTCCTCGGCGTTCGTCGCCGCCCCCACGATCATCGCCTCGGTCGCCC CGTATCGCATCCGAGCCCAGGCGTTCGCCCTGCTCCCCGTCTTCATCTTC TTGATGGGCGGATTCATCGGCGGCGTCGTGGCCGGCCAGATCTCCGATGC CTACAACAACCGCACGGCGATGATCCTGCTGGCGCCGTGGACGGCGATGC TCGGCGGTTGGCTGATCCGCCGGGGTGCGTTCCACATCCGGCGCGACATC TCGCTCGCCGTCGAGGAACTCCTCGAAGAACAAGAGGAAGCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90278:2..793-

>mRNA_M-pyrifera_M_contig90278.20929.1 ID=mRNA_M-pyrifera_M_contig90278.20929.1|Name=mRNA_M-pyrifera_M_contig90278.20929.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1584bp|location=Sequence derived from alignment at M-pyrifera_M_contig90278:2..793- (Macrocystis pyrifera P11B4 male)
TGGGCCTTTTACCTCCTCGCCATCCCGCCCGTCCTCGTGGGAATCGCCTC
GTTCATCATGAAGGAGCCCCGCCGGGGTCAGAACGAGCAGGAGGCCCTGC
TCACCGACGACGCCGTCGAGGTCGACGAACTCGAACCATCCATGAGCACG
GCGCTGGCCCGGCTCCGCAAGATCCGCACCTTCTACTTCTTCGCCACCGG
CGTCGGCGTGCTCGGGTTCGCACTCATCGCCGTGCCCACCCAGTTCAATC
TGCTCCTCGACGACAAGTACGGTCTCGATGCGCTCGATCGCGGCATCGTC
GAAGCCCTCTTGTGGGTGCCCTCGCTCGTCGCCATTCCGTTCGCGGGCAA
GGCGTTCGACAAGAAGTTCCGTGAAGACCCCGAAGCGATGGTCAGGTTCA
CCGGCGGGCTCATCATCGCCGCCGGCGCGATCTATCTGGTGGCCCTGCCC
ATCAAGGTGCTGTGGCTGCTCGTGCTCCTCGTCGGGCTCGCCCAGGCGTG
CATCTCCTCGGCGTTCGTCGCCGCCCCCACGATCATCGCCTCGGTCGCCC
CGTATCGCATCCGAGCCCAGGCGTTCGCCCTGCTCCCCGTCTTCATCTTC
TTGATGGGCGGATTCATCGGCGGCGTCGTGGCCGGCCAGATCTCCGATGC
CTACAACAACCGCACGGCGATGATCCTGCTGGCGCCGTGGACGGCGATGC
TCGGCGGTTGGCTGATCCGCCGGGGTGCGTTCCACATCCGGCGCGACATC
TCGCTCGCCGTCGAGGAACTCCTCGAAGAACAAGAGGAAGCATGGGCCTT
TTACCTCCTCGCCATCCCGCCCGTCCTCGTGGGAATCGCCTCGTTCATCA
TGAAGGAGCCCCGCCGGGGTCAGAACGAGCAGGAGGCCCTGCTCACCGAC
GACGCCGTCGAGGTCGACGAACTCGAACCATCCATGAGCACGGCGCTGGC
CCGGCTCCGCAAGATCCGCACCTTCTACTTCTTCGCCACCGGCGTCGGCG
TGCTCGGGTTCGCACTCATCGCCGTGCCCACCCAGTTCAATCTGCTCCTC
GACGACAAGTACGGTCTCGATGCGCTCGATCGCGGCATCGTCGAAGCCCT
CTTGTGGGTGCCCTCGCTCGTCGCCATTCCGTTCGCGGGCAAGGCGTTCG
ACAAGAAGTTCCGTGAAGACCCCGAAGCGATGGTCAGGTTCACCGGCGGG
CTCATCATCGCCGCCGGCGCGATCTATCTGGTGGCCCTGCCCATCAAGGT
GCTGTGGCTGCTCGTGCTCCTCGTCGGGCTCGCCCAGGCGTGCATCTCCT
CGGCGTTCGTCGCCGCCCCCACGATCATCGCCTCGGTCGCCCCGTATCGC
ATCCGAGCCCAGGCGTTCGCCCTGCTCCCCGTCTTCATCTTCTTGATGGG
CGGATTCATCGGCGGCGTCGTGGCCGGCCAGATCTCCGATGCCTACAACA
ACCGCACGGCGATGATCCTGCTGGCGCCGTGGACGGCGATGCTCGGCGGT
TGGCTGATCCGCCGGGGTGCGTTCCACATCCGGCGCGACATCTCGCTCGC
CGTCGAGGAACTCCTCGAAGAACAAGAGGAAGCA
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