mRNA_M-pyrifera_M_contig89826.20824.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89826.20824.1
Unique NamemRNA_M-pyrifera_M_contig89826.20824.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89826.20824.1 vs. uniprot
Match: A0A7Y5C813_9BACT (Alginate export family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C813_9BACT)

HSP 1 Score: 319 bits (817), Expect = 2.230e-103
Identity = 155/272 (56.99%), Postives = 203/272 (74.63%), Query Frame = 1
Query:    1 VSGLDTAG--GSDVQLYQAYIETRNTFGMPLRVRTGRQEIKLGKGWLVDDITTAIIGRSFDGMRFTYAQNGMELDGWWTKLSETF--SGDDDVDFYGLYGTYSALENVKFSLYWMLLRDGVTATDTTLGPGGEWVEDLFGVDDYSPTTLHTIGTRIWGNIGAFDYDWELAYQFGEADNVGALFVPV--VYGDNEADFDALATDLSLGYTLDMAWNPRVYVGGAFFEGEDNRDFRFGDRVLGGIRGTESSVSFNRLFPGKPYSLILGINQELS 798
            ++G D     G+DV++YQ+YIET  TFG+PLR+R GRQE+K+GKGWLVDDITTAIIGRSFD +R TY+ + +++D W++KL+E      D D DFYG+Y T  A++ +  S+YWM +RDG +  DT      EW+EDLF +DDY PT +HT+G R++GN   FDYD ELAYQFG+A +VG  F P   +YGD++A+FDA A DL +GYT+DMAWNPRVY+GGA+FEGEDNRD  F +  L      E+SVSFNRLFPGKPYS+I+ I Q++S
Sbjct:  121 ITGTDNRAVTGNDVEVYQSYIETNETFGLPLRLRIGRQEMKMGKGWLVDDITTAIIGRSFDAVRATYSLDTVDIDAWFSKLNERGIDEEDGDTDFYGIYATCHAVDWLNASVYWMYIRDGRSLNDTNFVAPIEWLEDLFDLDDYDPTNMHTVGLRLFGNSTGFDYDLELAYQFGDAGSVGFGFKPTGFLYGDDDAEFDAWAGDLEVGYTIDMAWNPRVYLGGAYFEGEDNRDLSFIE-WLNPFYRAEASVSFNRLFPGKPYSMIMEIGQDMS 391          
BLAST of mRNA_M-pyrifera_M_contig89826.20824.1 vs. uniprot
Match: A0A7C8ER66_9BACT (Alginate export family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C8ER66_9BACT)

HSP 1 Score: 251 bits (641), Expect = 7.250e-77
Identity = 132/272 (48.53%), Postives = 167/272 (61.40%), Query Frame = 1
Query:    1 VSGLDTAGGS--DVQLYQAYIETRNTFGMPLRVRTGRQEIKLGKGWLVD--DITTAIIGRSFDGMRFTYAQNGMELDGWWTKLSET--FSGDDDVDFYGLYGTYSALENVKFSLYWMLLRDGVTATDTTLGPGGEWVEDLFGVDDYSPTTLHTIGTRIWGNIGAFDYDWELAYQFGEADNVGALFVPVVYGDNEADFDALATDLSLGYTLDMAWNPRVYVGGAFFEGEDNRDFRFGDRVLGGIRGTESSVSFNRLFPGKPYSLILGINQELS 798
            ++G D    S  D+++YQAYIE    + MPLR R GRQE+  G  WLV   D     +GRSFD +R TY  +  ++D W  KL +T     D DVDFYG+YGT  ALENV F  YW+ +RDG    DT  GP  EWVED+ G+DDY  T LHT+G R  G +GAFD+  E AYQ G+A  VG  F P VYGD++ DF   A  L +GYT D+AWNPRV+ G +++ GEDNRD  F + +    R  E+SVSFNRLF    Y+    +  ELS
Sbjct:  132 ITGADMRAASVDDLEVYQAYIEASEMWDMPLRARIGRQELSFGSEWLVGPKDFGPMFMGRSFDAVRLTYGTDVYDIDVWSAKLVDTSPVEEDGDVDFYGVYGTCRALENVTFDAYWLFVRDGRALNDTNGGPLFEWVEDVLGLDDYDVTELHTVGLRAAGAVGAFDFGAEAAYQLGDAGQVGFNFKPWVYGDDDEDFSEWALKLDVGYTFDVAWNPRVHAGYSYYGGEDNRDLSFWEWINPFDR-PEASVSFNRLFSNHMYNGFFDLQNELS 402          
BLAST of mRNA_M-pyrifera_M_contig89826.20824.1 vs. uniprot
Match: A0A7Y5C5F2_9BACT (Alginate export family protein n=2 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C5F2_9BACT)

HSP 1 Score: 244 bits (622), Expect = 5.270e-74
Identity = 129/269 (47.96%), Postives = 163/269 (60.59%), Query Frame = 1
Query:    7 GLDTAGGSDVQLYQAYIETRNTFGMPLRVRTGRQEIKLGKGWL--VDDITTAIIGRSFDGMRFTYAQNGMELDGWWTKLSE--TFSGDDDVDFYGLYGTYSALENVKFSLYWMLLRDGVTATDTTLGPGGEWVEDLFGVDDYSPTTLHTIGTRIWGNIGAFDYDWELAYQFGEADNVGALFVPVVYGDNEADFDAL-ATDLSLGYTLDMAWNPRVYVGGAFFEGEDNRDFRFGDRVLGGIRGTESSVSFNRLFPGKPYSLILGINQELS 798
            G   AG  DV +YQAYIE    +G PLR R GRQE+  G  WL  V D      G SFDG+R TYA +   +D ++T L E      D+DV F G+YG+Y  LEN+    YW+ +RD  +  DT      EW+ED+F +DDY  T LHT+G R  G IGAFD++ E AYQFG+A   G LF P +YGD++A+FD L   +L +GYT D AW PRVY+GGA+F+GED R   F +  L      ESSVSFNRLF    YS  +  N +LS
Sbjct:  139 GRHLAGTGDVSIYQAYIEANEMWGFPLRARIGRQELSFGSEWLIGVQDTAAFFTGLSFDGVRLTYATDVFSVDAFYTTLVEGGINEEDEDVSFAGIYGSYKGLENITIDAYWLWVRDARSLNDTNFIAPIEWLEDIFSLDDYDVTNLHTVGLRGAGTIGAFDFEAEAAYQFGDAGQQGFLFKPFLYGDDDAEFDGLWGANLEVGYTFDFAWTPRVYLGGAYFDGEDERSISFWE-WLNPFDSPESSVSFNRLFSNWEYSEFIE-NTDLS 405          
BLAST of mRNA_M-pyrifera_M_contig89826.20824.1 vs. uniprot
Match: A0A1V6F2A4_9BACT (Alginate_exp domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6F2A4_9BACT)

HSP 1 Score: 242 bits (617), Expect = 2.920e-73
Identity = 125/274 (45.62%), Postives = 166/274 (60.58%), Query Frame = 1
Query:    1 VSGLDTAGGSD--VQLYQAYIETRNTFGMPLRVRTGRQEIKLGKGWLV--DDITTAIIGRSFDGMRFTYAQNGMELDGWWTKLSETFS--GDDDVDFYGLYGTYSALENVKFSLYWMLLRDGVTATDTTLGPGGEWVEDLFGVDDYSPTTLHTIGTRIWGNIGAFDYDWELAYQFGEADNVGALFVPVVYGDNEADFDALATDLSLGYTLDMAWNPRVYVGGAFFEGEDNRDFRFGDRV--LGGIRGTESSVSFNRLFPGKPYSLILGINQELS 798
            ++G D   G +  +QL+QAY+E    +G+P+R+R GRQE+  GKGWL   +D      G SFD  R TY    + LD +W+KL+E F+   D D DF G+Y +Y+A   +    YW L+RD     DT      +W+E LFG DDY  T LHT+G R  G  G  DYD E A+QFGEA   G LF P +YGD+EA+FDA A +  LGYTL+++W PR+Y+G A+F GEDNRD  F   +  L  ++  ESSVSFNRLF    +S  +    ELS
Sbjct:  132 LTGADQRNGENDSIQLHQAYVEASEAWGLPVRIRIGRQELIFGKGWLTGNNDALPEFAGLSFDAARVTYTPGALTLDAFWSKLAERFAVEADGDTDFAGVYASYAASNALNLDAYWFLVRDAAHLEDTQDALISDWLESLFGRDDYGATQLHTLGMRASGAWGRLDYDLEAAWQFGEAAAPGFLFKPFIYGDDEAEFDAWAVETELGYTLELSWCPRLYLGAAYFSGEDNRDLSFWGWLNPLTAVKRPESSVSFNRLFSNTVHSYFMDEMGELS 405          
BLAST of mRNA_M-pyrifera_M_contig89826.20824.1 vs. uniprot
Match: A0A7Y5F882_9BACT (Alginate export family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5F882_9BACT)

HSP 1 Score: 240 bits (612), Expect = 1.510e-72
Identity = 123/272 (45.22%), Postives = 164/272 (60.29%), Query Frame = 1
Query:    1 VSGLD--TAGGSDVQLYQAYIETRNTFGMPLRVRTGRQEIKLGKGWLVD--DITTAIIGRSFDGMRFTYAQNGMELDGWWTKLSE--TFSGDDDVDFYGLYGTYSALENVKFSLYWMLLRDGVTATDTTLGPGGEWVEDLFGVDDYSPTTLHTIGTRIWGNIGAFDYDWELAYQFGEADNVGALFVPVVYGDNEADFDALATDLSLGYTLDMAWNPRVYVGGAFFEGEDNRDFRFGDRVLGGIRGTESSVSFNRLFPGKPYSLILGINQELS 798
            ++G D   A G DV++YQAYI+    +GMPLR+R GRQE+  G  WLV   D      GRSFD +R TYA +   +D W++ L+E      D+DV FYG+Y T  ALEN+ F  YW+ +RD  +  DT      EW+ED F +DDY  T LHT+G R  G +GAFD+D E AYQFG+AD  G  F P +YGD+ A++DA      +GY  D+AW P V+   A++EGEDNRD  F  + L      E+SVSFNRLF  + Y+    +  + S
Sbjct:  132 ITGADRRAATGDDVEMYQAYIDVNEMYGMPLRLRIGRQELAFGSQWLVGPKDFGPFYRGRSFDALRLTYATDITTVDAWYSTLAEGGIAEEDEDVAFYGVYATCKALENIAFDAYWLWVRDARSLNDTNFIAPIEWLEDAFNLDDYDTTNLHTVGLRASGVLGAFDFDVETAYQFGDADRNGFFFKPYLYGDDGAEYDAWGLTAQVGYAFDVAWQPHVFAKYAYYEGEDNRDINFW-QWLNPFDRPEASVSFNRLFSNQMYNGFFDLQNDFS 402          
BLAST of mRNA_M-pyrifera_M_contig89826.20824.1 vs. uniprot
Match: A0A1V5ZPW6_9BACT (Alginate_exp domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin179 TaxID=1852849 RepID=A0A1V5ZPW6_9BACT)

HSP 1 Score: 238 bits (608), Expect = 6.370e-72
Identity = 123/274 (44.89%), Postives = 165/274 (60.22%), Query Frame = 1
Query:    1 VSGLDTAGGSD--VQLYQAYIETRNTFGMPLRVRTGRQEIKLGKGWLV--DDITTAIIGRSFDGMRFTYAQNGMELDGWWTKLSETFS--GDDDVDFYGLYGTYSALENVKFSLYWMLLRDGVTATDTTLGPGGEWVEDLFGVDDYSPTTLHTIGTRIWGNIGAFDYDWELAYQFGEADNVGALFVPVVYGDNEADFDALATDLSLGYTLDMAWNPRVYVGGAFFEGEDNRDFRFGDRV--LGGIRGTESSVSFNRLFPGKPYSLILGINQELS 798
            ++G D   G +  +QL+QAY+E    +G+P+R+R GRQE+  GKGWL   +D      G SFD  R TY    + LD +W+KL+E F+   D D DF G+Y +Y+A + +    YW  +RD     +T      + +E LFG DDY  T LHT+G R+ G +G  DYD ELAYQFGEAD  G  F P  YGD+EA+FDA A +  +GYTLD++W PR Y+G A++ GEDNRD  F   +     I+  ESS+SFNRLF    +S  L    ELS
Sbjct:  132 LNGADPRNGENDSIQLHQAYVEASEAWGLPVRIRIGRQELIFGKGWLTGNNDALPEFAGLSFDAARVTYTPGALTLDAFWSKLAERFAVEEDGDTDFAGVYASYAASDALTLDAYWFWVRDAAHLENTQDALVSDGLESLFGRDDYGATNLHTLGGRLAGALGGLDYDLELAYQFGEADAAGFFFKPFTYGDDEAEFDAWAAETEIGYTLDVSWRPRFYLGAAYYYGEDNRDIDFWGWLNPFTAIQRPESSISFNRLFSNTVHSYFLDEMGELS 405          
BLAST of mRNA_M-pyrifera_M_contig89826.20824.1 vs. uniprot
Match: A0A7C3SW96_9BACT (Alginate_exp domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3SW96_9BACT)

HSP 1 Score: 237 bits (605), Expect = 1.370e-71
Identity = 127/273 (46.52%), Postives = 170/273 (62.27%), Query Frame = 1
Query:    1 VSGLDTAGGS--DVQLYQAYIETRNTFGMPLRVRTGRQEIKLGKGWLVDDITTAIIGRSFDGMRFTYAQNGMELDGWWTKLSETFS--GDDDVDFYGLYGTYSALENVKFSLYWMLLRDGVTATDTTLGPGGEWVEDLFGVDDYSPTTLHTIGTRIWGNIGAFDYDWELAYQFGEADNVGALFVPV--VYGDNEADFDALATDLSLGYTL-DMAWNPRVYVGGAFFEGEDNRDFRFGDRVLGGIRGTESSVSFNRLFPGKPYSLILGINQELS 798
            V+G+DT   S  DV++ QAY+E R  FG PL +R GRQ++ +GKGWLV ++ T     S D +R TY Q    +D + +KL++ F    D D+DFYG+YGTY+  + +  S YW  LRDG++  DTT  P  E+ EDL G DDY  T LHT+G R +G    FDYD ELAYQFG+AD++GA F P+  +YGD+ A +  L  +L+LGYT  D+ W+PR+Y  G +F+G DNR   F D  L      E+S SFNRLF  K Y   +  N  LS
Sbjct:  123 VTGIDTRADSKDDVEIEQAYVEVRELFGAPLTLRVGRQDLIMGKGWLVTNMLTPSQYSSHDAIRLTYKQGDWTVDAFASKLNDRFQIEQDGDIDFYGIYGTYAGWKPLTVSAYWYFLRDGLSPHDTTGNPVMEFAEDLVGRDDYGVTKLHTVGIRAFGKSTGFDYDLELAYQFGDADSLGATFKPIGMIYGDDNAHWGDLGAELTLGYTFEDVKWSPRIYTLGVYFQGHDNRSINFWD-WLNPFYEPEASHSFNRLFSDKNYLPTVNDNGWLS 394          
BLAST of mRNA_M-pyrifera_M_contig89826.20824.1 vs. uniprot
Match: A0A7C8EIY0_9BACT (Alginate export family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C8EIY0_9BACT)

HSP 1 Score: 233 bits (595), Expect = 4.010e-70
Identity = 125/258 (48.45%), Postives = 161/258 (62.40%), Query Frame = 1
Query:    1 VSGLDTAGGS--DVQLYQAYIETRNTFGMPLRVRTGRQEIKLGKGWLVDDITTA--IIGRSFDGMRFTYAQNGMELDGWWTKLSET--FSGDDDVDFYGLYGTYSALENVKFSLYWMLLRDGVTATDTTLGPGGEWVEDLFGVDDYSPTTLHTIGTRIWGNIGAFDYDWELAYQFGEADNVGALFVPV--VYGDNEADFDALATDLSLGYTLDMAWNPRVYVGGAFFEGEDNRDFRFGDRVLGGIRGTESSVSFNRLF 750
            V+G D    S  DV++YQAYIE     G P+R+R GRQEI  G GWLV     A    G SFD +R TY+     +D WW+KL+E      D D+DFYG+Y T +A+E+++F  YWM +RD V+  +T +G   EW+ED  G+DDY  T LHT+G R  G  GA+D++ E AYQ GEAD VG LFVPV  ++GD+ A FD  A    +GYT D AW PR Y+G  ++EGED RD  F +  L      E+SVSFNRLF
Sbjct:  121 VTGGDMRAASVDDVEVYQAYIEADAMCGAPVRLRVGRQEIAFGSGWLVGANPDADPFTGLSFDAVRLTYSGAAYTVDAWWSKLAEMSPIEEDGDIDFYGIYATCTAIEDIEFDAYWMCVRDAVSVQNTRVGLIEEWLEDALGLDDYDVTELHTVGLRSAGARGAWDWEVEGAYQCGEADAVGWLFVPVGRIFGDDGASFDNWAGHCEVGYTFDAAWQPRAYLGAQYYEGEDRRDLSFWE-WLNPFDRPEASVSFNRLF 377          
BLAST of mRNA_M-pyrifera_M_contig89826.20824.1 vs. uniprot
Match: A0A7C8EKB8_9BACT (Alginate export family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C8EKB8_9BACT)

HSP 1 Score: 233 bits (595), Expect = 7.320e-70
Identity = 130/276 (47.10%), Postives = 169/276 (61.23%), Query Frame = 1
Query:    1 VSGLDTAGGS--DVQLYQAYIETRNTFGMPLRVRTGRQEIKLGKGWLV--DDITTAIIGRSFDGMRFTYAQNGMELDGWWTKLSETF--SGDDDVDFYGLYGTYSALENVKFSLYWMLLRDGVTATDTTLGPGGEWVEDLFGVDDYSPTTLHTIGTRIWGNIGAFDYDWELAYQFGEADNVGALFVPVVYGDNEADFDALATDLSLGYTLDMAWNPRVYVGGAFFEGEDNRD----FRFGDRVLGGIRGTESSVSFNRLFPGKPYSLILGINQELS 798
            ++G D    S  DV++YQAYIE R  +G+PL +R GRQEI LG  WLV  +D ++   G SFDG+   Y  + + + G W KL+ET     D DVD YG+Y TY+ LE++    YWML+RD     D T G  GEW+ED+F VDD+  T  HTIG R  G +GA D++ E AYQFGEAD VGA F P++Y D++ADFD    +L +GYT D AW PR Y+G  +  GED RD    + +  + L   R  ++SVSFNRLF    YS  L  N  LS
Sbjct:  144 ITGADMRAASVNDVEVYQAYIEGREMWGLPLCLRIGRQEISLGNEWLVGVNDTSSMFTGLSFDGILAVYEFDLVTVAGVWAKLAETSPTEEDGDVDLYGIYATYNGLEDITIDGYWMLVRDARMNEDITRGWVGEWLEDVFDVDDHDVTKCHTIGLRGAGTVGAIDFEAEAAYQFGEADMVGATFAPILYSDDDADFDEWGMNLEVGYTFDTAWEPRAYLGLVYLGGEDERDIGNIWEWFRQFLPFYR-PDASVSFNRLFSNVEYSEFLD-NTSLS 417          
BLAST of mRNA_M-pyrifera_M_contig89826.20824.1 vs. uniprot
Match: A0A7C4UQU0_9BACT (Alginate_exp domain-containing protein (Fragment) n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C4UQU0_9BACT)

HSP 1 Score: 229 bits (585), Expect = 6.150e-69
Identity = 125/274 (45.62%), Postives = 168/274 (61.31%), Query Frame = 1
Query:    1 VSGLDTAGGS--DVQLYQAYIETRNTFGMPLRVRTGRQEIKLGKGWLVDDITTAIIGRSFDGMRFTYAQNGMELDGWWTKLSETFS--GDDDVDFYGLYGTYSALENVKFSLYWMLLRDGVTATDTTLGPGGEWVEDLFGVDDYSPTTLHTIGTRIWGNIGAFDYDWELAYQFGEADNVGALFVPV---VYGDNEADFDALATDLSLGYTL-DMAWNPRVYVGGAFFEGEDNRDFRFGDRVLGGIRGTESSVSFNRLFPGKPYSLILGINQELS 798
            V+G+D    S  DV++ QAYIE RN FG PL +R GRQ++ +GKGWLV ++ T     S D +R TY +    +D + +KL+E +    D D+DFYG+Y TYS  + +  S YW  LRDG++  DTT  P  E++ED+   DDY  T LHT+G R +G  G FDYD ELAYQFG+AD++G  F P+   +YGD++A +  L  +L LGYT  D+ W PR+Y    +F+G DNRD  F D  L      E+S SFNRLF  K Y   +  N  LS
Sbjct:  121 VTGVDIRADSKDDVEIEQAYIELRNLFGAPLTLRVGRQDLVMGKGWLVTNMLTPSQYSSHDAIRLTYKEGDWTVDAFASKLAERYEIEQDGDIDFYGVYATYSGWKPLSLSAYWYFLRDGLSPHDTTGDPILEFMEDVLNRDDYGVTRLHTVGIRAFGKSGNFDYDLELAYQFGDADSLGTRFKPIGGYLYGDDDASWGDLGGELILGYTFQDIKWTPRIYTLAVYFQGHDNRDISFWD-WLNPFYEPEASHSFNRLFSDKNYMPTVNDNGWLS 393          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89826.20824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y5C813_9BACT2.230e-10356.99Alginate export family protein n=1 Tax=Candidatus ... [more]
A0A7C8ER66_9BACT7.250e-7748.53Alginate export family protein n=1 Tax=Candidatus ... [more]
A0A7Y5C5F2_9BACT5.270e-7447.96Alginate export family protein n=2 Tax=Candidatus ... [more]
A0A1V6F2A4_9BACT2.920e-7345.62Alginate_exp domain-containing protein n=1 Tax=Can... [more]
A0A7Y5F882_9BACT1.510e-7245.22Alginate export family protein n=1 Tax=Candidatus ... [more]
A0A1V5ZPW6_9BACT6.370e-7244.89Alginate_exp domain-containing protein n=1 Tax=Can... [more]
A0A7C3SW96_9BACT1.370e-7146.52Alginate_exp domain-containing protein n=1 Tax=Can... [more]
A0A7C8EIY0_9BACT4.010e-7048.45Alginate export family protein n=1 Tax=Candidatus ... [more]
A0A7C8EKB8_9BACT7.320e-7047.10Alginate export family protein n=1 Tax=Candidatus ... [more]
A0A7C4UQU0_9BACT6.150e-6945.62Alginate_exp domain-containing protein (Fragment) ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89826contigM-pyrifera_M_contig89826:3..800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score97.1
Seed ortholog evalue1.4e-17
Seed eggNOG ortholog1131553.JIBI01000046_gene1604
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Alginate export
EggNOG OGs1QUUK@1224,2WGXZ@28216,3722U@32003,COG3637@1,COG3637@2
COG Functional cat.M
Best tax levelNitrosomonadales
Best eggNOG OGNA|NA|NA
Exons1
Model size798
Cds size798
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816809.2218115-CDS-M-pyrifera_M_contig89826:2..8001622816809.2218115-CDS-M-pyrifera_M_contig89826:2..800Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89826 3..800 +
1692278191.276399-CDS-M-pyrifera_M_contig89826:2..8001692278191.276399-CDS-M-pyrifera_M_contig89826:2..800Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89826 3..800 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89826.20824.1prot_M-pyrifera_M_contig89826.20824.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89826 3..800 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89826.20824.1

>prot_M-pyrifera_M_contig89826.20824.1 ID=prot_M-pyrifera_M_contig89826.20824.1|Name=mRNA_M-pyrifera_M_contig89826.20824.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp
VSGLDTAGGSDVQLYQAYIETRNTFGMPLRVRTGRQEIKLGKGWLVDDIT
TAIIGRSFDGMRFTYAQNGMELDGWWTKLSETFSGDDDVDFYGLYGTYSA
LENVKFSLYWMLLRDGVTATDTTLGPGGEWVEDLFGVDDYSPTTLHTIGT
RIWGNIGAFDYDWELAYQFGEADNVGALFVPVVYGDNEADFDALATDLSL
GYTLDMAWNPRVYVGGAFFEGEDNRDFRFGDRVLGGIRGTESSVSFNRLF
PGKPYSLILGINQELS
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mRNA from alignment at M-pyrifera_M_contig89826:3..800+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89826.20824.1 ID=mRNA_M-pyrifera_M_contig89826.20824.1|Name=mRNA_M-pyrifera_M_contig89826.20824.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig89826:3..800+ (Macrocystis pyrifera P11B4 male)
GTTTCTGGCCTGGATACGGCGGGGGGCTCGGATGTCCAGCTCTATCAGGC CTATATTGAAACCCGAAACACCTTCGGCATGCCTTTGCGCGTTCGGACGG GGCGCCAGGAAATAAAACTTGGCAAGGGATGGCTTGTCGATGATATTACG ACCGCTATTATAGGCCGCTCCTTTGATGGTATGCGCTTTACCTATGCGCA GAACGGCATGGAACTCGACGGGTGGTGGACGAAGCTGTCCGAAACGTTTT CGGGTGATGACGATGTAGATTTTTACGGTCTGTATGGCACCTACAGCGCC CTGGAAAATGTGAAGTTTTCACTCTACTGGATGTTGCTCCGTGATGGGGT TACCGCCACCGATACCACGCTCGGCCCCGGGGGAGAATGGGTAGAAGATC TCTTTGGTGTAGACGACTACAGCCCGACGACCTTGCACACCATCGGTACC CGAATCTGGGGCAACATAGGTGCCTTTGACTACGATTGGGAATTGGCCTA CCAATTTGGCGAGGCCGATAACGTGGGGGCCTTATTTGTCCCCGTGGTCT ATGGCGATAATGAGGCCGACTTCGATGCGCTCGCGACTGATTTGAGTCTC GGCTATACCTTAGATATGGCATGGAATCCGCGGGTGTACGTGGGTGGGGC CTTCTTTGAAGGCGAAGACAACCGCGACTTTCGCTTTGGCGATCGGGTCT TAGGCGGTATTCGTGGAACGGAATCCAGCGTTTCCTTTAATCGCCTCTTT CCCGGCAAGCCTTATAGCCTGATTCTCGGCATTAACCAGGAGCTTTCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89826:3..800+

>mRNA_M-pyrifera_M_contig89826.20824.1 ID=mRNA_M-pyrifera_M_contig89826.20824.1|Name=mRNA_M-pyrifera_M_contig89826.20824.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig89826:3..800+ (Macrocystis pyrifera P11B4 male)
GTTTCTGGCCTGGATACGGCGGGGGGCTCGGATGTCCAGCTCTATCAGGC
CTATATTGAAACCCGAAACACCTTCGGCATGCCTTTGCGCGTTCGGACGG
GGCGCCAGGAAATAAAACTTGGCAAGGGATGGCTTGTCGATGATATTACG
ACCGCTATTATAGGCCGCTCCTTTGATGGTATGCGCTTTACCTATGCGCA
GAACGGCATGGAACTCGACGGGTGGTGGACGAAGCTGTCCGAAACGTTTT
CGGGTGATGACGATGTAGATTTTTACGGTCTGTATGGCACCTACAGCGCC
CTGGAAAATGTGAAGTTTTCACTCTACTGGATGTTGCTCCGTGATGGGGT
TACCGCCACCGATACCACGCTCGGCCCCGGGGGAGAATGGGTAGAAGATC
TCTTTGGTGTAGACGACTACAGCCCGACGACCTTGCACACCATCGGTACC
CGAATCTGGGGCAACATAGGTGCCTTTGACTACGATTGGGAATTGGCCTA
CCAATTTGGCGAGGCCGATAACGTGGGGGCCTTATTTGTCCCCGTGGTCT
ATGGCGATAATGAGGCCGACTTCGATGCGCTCGCGACTGATTTGAGTCTC
GGCTATACCTTAGATATGGCATGGAATCCGCGGGTGTACGTGGGTGGGGC
CTTCTTTGAAGGCGAAGACAACCGCGACTTTCGCTTTGGCGATCGGGTCT
TAGGCGGTATTCGTGGAACGGAATCCAGCGTTTCCTTTAATCGCCTCTTT
CCCGGCAAGCCTTATAGCCTGATTCTCGGCATTAACCAGGAGCTTTCTGT
TTCTGGCCTGGATACGGCGGGGGGCTCGGATGTCCAGCTCTATCAGGCCT
ATATTGAAACCCGAAACACCTTCGGCATGCCTTTGCGCGTTCGGACGGGG
CGCCAGGAAATAAAACTTGGCAAGGGATGGCTTGTCGATGATATTACGAC
CGCTATTATAGGCCGCTCCTTTGATGGTATGCGCTTTACCTATGCGCAGA
ACGGCATGGAACTCGACGGGTGGTGGACGAAGCTGTCCGAAACGTTTTCG
GGTGATGACGATGTAGATTTTTACGGTCTGTATGGCACCTACAGCGCCCT
GGAAAATGTGAAGTTTTCACTCTACTGGATGTTGCTCCGTGATGGGGTTA
CCGCCACCGATACCACGCTCGGCCCCGGGGGAGAATGGGTAGAAGATCTC
TTTGGTGTAGACGACTACAGCCCGACGACCTTGCACACCATCGGTACCCG
AATCTGGGGCAACATAGGTGCCTTTGACTACGATTGGGAATTGGCCTACC
AATTTGGCGAGGCCGATAACGTGGGGGCCTTATTTGTCCCCGTGGTCTAT
GGCGATAATGAGGCCGACTTCGATGCGCTCGCGACTGATTTGAGTCTCGG
CTATACCTTAGATATGGCATGGAATCCGCGGGTGTACGTGGGTGGGGCCT
TCTTTGAAGGCGAAGACAACCGCGACTTTCGCTTTGGCGATCGGGTCTTA
GGCGGTATTCGTGGAACGGAATCCAGCGTTTCCTTTAATCGCCTCTTTCC
CGGCAAGCCTTATAGCCTGATTCTCGGCATTAACCAGGAGCTTTCT
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