mRNA_M-pyrifera_M_contig8964.20786.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8964.20786.1 vs. uniprot
Match: D8LSU5_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSU5_ECTSI) HSP 1 Score: 273 bits (697), Expect = 6.130e-91 Identity = 134/169 (79.29%), Postives = 155/169 (91.72%), Query Frame = 1 Query: 1 AQKNRGQVATQEEKDSAMDLIYQLEALNPTPDATNVNIIGGVWELVYSDSQPFRSSPFFMAIGELFGEEKDRAETLFAFHRAATSIGEIGRVRQTISEAMLVSEIDLKVGVFPGLPVSLTGTVVTKARLSPISSIRGDVPETKLSTYYLDDNMRISRTPDDHVFVYVRA 507 A NRGQVATQEEKD+AMDLI+QLE+LNPTPDATNVN IGG WELVY+D+QPFR SPFFMA+GE+FGE+K +AETLF+ HRAATS GEIGRVRQTISE+MLVSEIDLKVG+ PGLP++L GTVVTKARL+P+S++RG VPE KLSTYYLD++MRISR DDHVFV+VRA Sbjct: 46 ATSNRGQVATQEEKDAAMDLIFQLESLNPTPDATNVNTIGGAWELVYTDTQPFRCSPFFMALGEVFGEKKGQAETLFSLHRAATSNGEIGRVRQTISESMLVSEIDLKVGLLPGLPMALKGTVVTKARLNPVSTLRGSVPEAKLSTYYLDEDMRISRMSDDHVFVFVRA 214
BLAST of mRNA_M-pyrifera_M_contig8964.20786.1 vs. uniprot
Match: A0A836CGB3_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB3_9STRA) HSP 1 Score: 214 bits (545), Expect = 3.110e-68 Identity = 101/166 (60.84%), Postives = 131/166 (78.92%), Query Frame = 1 Query: 10 NRGQVATQEEKDSAMDLIYQLEALNPTPDATNVNIIGGVWELVYSDSQPFRSSPFFMAIGELFGEEKDRAETLFAFHRAATSIGEIGRVRQTISEAMLVSEIDLKVGVFPGLPVSLTGTVVTKARLSPISSIRGDVPETKLSTYYLDDNMRISRTPDDHVFVYVRA 507 NRGQ+A+ +EK + DL+YQLEALNPTP + IGG WEL++SD QPFRSSPFFMA+GELF +++ R ET FA HRAAT+ GEIGRVRQ IS + L SE+DL+VG+ G+P SL+GTVV++A++ ++IRG PE +LSTYYLD + R+SRTPD+H F+Y RA Sbjct: 21 NRGQLASDDEKSTVSDLVYQLEALNPTPVTNDDIAIGGTWELIFSDVQPFRSSPFFMAVGELFQDDRSRGETAFALHRAATANGEIGRVRQMISGSELTSEVDLRVGLLSGVPFSLSGTVVSRAKVRAFTAIRGSAPEVRLSTYYLDSDFRVSRTPDEHYFIYTRA 186
BLAST of mRNA_M-pyrifera_M_contig8964.20786.1 vs. uniprot
Match: A0A6V1MSR7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MSR7_HETAK) HSP 1 Score: 176 bits (446), Expect = 8.160e-52 Identity = 93/203 (45.81%), Postives = 126/203 (62.07%), Query Frame = 1 Query: 10 NRGQVATQEEKDSAMDLIYQLEALNPTPDATNVNIIGGVWELVYSDSQPFRSSPFFMAIGELFGEEKDRAETLFAFHRAATSIGEIGRVRQTISEAMLVSEIDLKVGVFPGLPVSLTGTVVTKARLS----------------------------------PISSI----RGDVPETKLSTYYLDDNMRISRTPDDHVFVYVR 504 NRGQ+A+++EKD +DL+YQLE++NP+P TN+ G WELVYSD + FRSSPFFMA+ +LFG++ ++A F+ HR ATS EIG+V+Q + + LVSE+DLKVG P LP ++TGTVV+ A ++ P+ + RG VP L+TYYLDD MRISRT D+H FVY+R Sbjct: 92 NRGQIASEDEKDIVIDLVYQLESMNPSPK-TNIAASYGTWELVYSDVELFRSSPFFMAVRDLFGDDDEKASQAFSLHRLATSTSEIGKVKQILGPSTLVSEVDLKVGTIPSLPFAITGTVVSDAEVTANGDQSLQVTVGKTKVSNSNILKFLNLEDMGAAVPVKDVFERLRGSVPTVPLNTYYLDDTMRISRTQDEHFFVYIR 293
BLAST of mRNA_M-pyrifera_M_contig8964.20786.1 vs. uniprot
Match: A0A7S4ADX8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ADX8_9STRA) HSP 1 Score: 130 bits (327), Expect = 6.550e-34 Identity = 82/206 (39.81%), Postives = 114/206 (55.34%), Query Frame = 1 Query: 10 NRGQVATQEEKDSAMDLIYQLEALNPTPD-ATNVNIIGGVWELVYSDSQPFRSSPFFMAIGELFGEE-KDRAETLFAFHRAATSIGEIGRVRQTISEAMLVSEIDLKVGVFPGLPVSLTGTVVTKARLSPIS---------------------------------------SIRGDVPETKLSTYYLDDNMRISRTPDDHVFVYVR 504 +RG +++EKD +DL+ QLEALNPT D A N G W+L YS +Q FRSSPFF +I GE+ KD AE FA H ATS +GRVRQ I+ L SE+DL+VG+ PG+P S+ GTVV+ A L+ +S +++G P L+T+Y+DD +RI+R D++ FV++R Sbjct: 99 DRGAYCSKDEKDIVIDLVAQLEALNPTKDPAFNCE---GEWDLGYSSTQFFRSSPFFQSIRVAVGEDNKDVAENGFALHAQATSGSRVGRVRQIITADKLTSEVDLEVGLAPGIPFSIQGTVVSSAALNVVSDKRWELRMENTKVKGSNIPLFNQFLDNLQMEVPVGDFYNTLQGTTPVIPLTTFYVDDTLRITRDVDENFFVFIR 301
BLAST of mRNA_M-pyrifera_M_contig8964.20786.1 vs. uniprot
Match: A0A0G4EBL4_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EBL4_VITBC) HSP 1 Score: 127 bits (319), Expect = 1.300e-32 Identity = 78/212 (36.79%), Postives = 112/212 (52.83%), Query Frame = 1 Query: 1 AQKNRGQVATQEEKDSAMDLIYQLEALNPT---PDATNVNIIGGVWELVYSDSQPFRSSPFFMAIGELFGEEK--DRAETLFAFHRAATSIGEIGRVRQTISEAMLVSEIDLKVGVFPGLPVSLTGTVVTKARLSPIS---------------------------------------SIRGDVPETKLSTYYLDDNMRISRTPDDHVFVYVR 504 A+ +RGQ+A EK+ D+ L A+ + + NI G WEL+Y D Q FR SPF+M + LFG +AE+LF HR T + EIGRVRQ +++ +VSE+DL VG+ PGLP+++ GTVV+ A + P+ ++ G +P K ST Y+DD++RIS+T D H+FVYVR Sbjct: 104 ARTSRGQLAKPYEKEMVNDICSSLAAMAADGNGKEGGDANI-DGTWELLYGDVQLFRQSPFWMTLRRLFGSATALPQAESLFDLHRLQTRVSEIGRVRQKVADGKMVSEVDLAVGLLPGLPMAVKGTVVSSADVRPVKGGSANDMALQLLSTYVRDANVLPMLGRRIRIPWGALMRGALGGSLPSVKYSTLYVDDDLRISKTDDGHLFVYVR 314
BLAST of mRNA_M-pyrifera_M_contig8964.20786.1 vs. uniprot
Match: A0A1E7FER3_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FER3_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.370e-31 Identity = 78/207 (37.68%), Postives = 111/207 (53.62%), Query Frame = 1 Query: 10 NRGQVATQEEKDSAMDLIYQLEALNPTPDATNVNIIGGVWELVYSDSQPFRSSPFFMAIGELFGEE-KDRAETLFAFHRAATSIGEIGRVRQTI-SEAMLVSEIDLKVGVFPGLPVSLTGTVVTKARLSPISS----------------------------------------IRGDVPETKLSTYYLDDNMRISRTPDDHVFVYVR 504 +RG A++EE+D +DL+ QLEALNPT + + G W+L YS +Q FRSSPFF +I G+E KD E FA H AT +GRVRQ + S+ L+SE+ L+VG PG+P+SL GTVVT A L +S + G VP ++T+Y+D+ +RI+R D++ FV++R Sbjct: 76 DRGAFASKEERDIVIDLVAQLEALNPTRNPASH--CEGEWDLCYSSTQFFRSSPFFQSIRVAVGDENKDMTENGFALHEQATMGSRVGRVRQIVTSDNKLISEVSLEVGTLPGIPISLQGTVVTTASLDVVSDKNWELQIENTKVTGSNIPFINMFMDDLQVELPVGDFYSTVMSGKVPVIPMTTFYVDEALRITRDIDENFFVFIR 280
BLAST of mRNA_M-pyrifera_M_contig8964.20786.1 vs. uniprot
Match: A0A7S1ZVU8_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZVU8_TRICV) HSP 1 Score: 122 bits (305), Expect = 2.010e-31 Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 1 Query: 10 NRGQVATQEEKDSAMDLIYQLEALNPTPDATNVNIIGGVWELVYSDSQPFRSSPFFMAIGELFGEE-KDRAETLFAFHRAATSIGEIGRVRQTISEAMLVSEIDLKVGVFPGLPVSLTGTVVTKARLSPI 396 +RG+ AT+EE+D +DL+ QLEALNPTPD G W+L ++ Q FRSSPFF+++ + G E K AE F H ATS+ IGRVRQ +SE+ L+SE+DL+VG+ PGLP + GTV+T A L + Sbjct: 89 DRGEYATKEERDIVVDLVTQLEALNPTPDPALS--CSGQWDLCLTNVQAFRSSPFFLSLRSIAGTEYKSVAENGFELHNRATSVSRIGRVRQIVSESELISEVDLEVGLAPGLPFRVRGTVITDAELRTV 216
BLAST of mRNA_M-pyrifera_M_contig8964.20786.1 vs. uniprot
Match: A0A7R9WND8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WND8_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.300e-30 Identity = 68/129 (52.71%), Postives = 88/129 (68.22%), Query Frame = 1 Query: 10 NRGQVATQEEKDSAMDLIYQLEALNPTPD-ATNVNIIGGVWELVYSDSQPFRSSPFFMAIGELFGEE-KDRAETLFAFHRAATSIGEIGRVRQTISEAMLVSEIDLKVGVFPGLPVSLTGTVVTKARLS 390 NRG+ A++EE+D +DL+ QLEALNPT + A+N N G W+L S +Q FRSSPFF AI G+ K AE F H AT+ G +GRVRQ I++ ++SE+DL+VGV PGLP+ GTVVT A LS Sbjct: 118 NRGEYASREERDIVVDLVTQLEALNPTAEPASNAN---GEWDLCISSTQFFRSSPFFQAIRVAAGDNNKAYAENFFDLHDRATAAGRVGRVRQIITQDTMISEVDLEVGVLPGLPIRFDGTVVTDAELS 243
BLAST of mRNA_M-pyrifera_M_contig8964.20786.1 vs. uniprot
Match: A0A7R9Z4E9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z4E9_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.410e-29 Identity = 63/131 (48.09%), Postives = 87/131 (66.41%), Query Frame = 1 Query: 10 NRGQVATQEEKDSAMDLIYQLEALNPTPDATNVNIIGGVWELVYSDSQPFRSSPFFMAIGELFGEE-KDRAETLFAFHRAATSIGEIGRVRQTISEAMLVSEIDLKVGVFPGLPVSLTGTVVTKARLSPIS 399 +RG A+++E D +DL+ QLEALNPT D G W+L +++Q FRSSPFF+AI G++ K A+ F H ATS+ IGRVRQT+ + +VSE+DL+VG+ PGLPV + GTVVT A L ++ Sbjct: 8 DRGMYASKDEADIVVDLVTQLEALNPTADPALQ--CEGEWDLTLTNTQLFRSSPFFLAIRSALGDDNKQIADNGFELHNRATSVSRIGRVRQTVKDGEVVSEVDLEVGLLPGLPVRVKGTVVTTAGLKVVA 136
BLAST of mRNA_M-pyrifera_M_contig8964.20786.1 vs. uniprot
Match: A0A7S2Q3I4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q3I4_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.590e-28 Identity = 68/133 (51.13%), Postives = 86/133 (64.66%), Query Frame = 1 Query: 10 NRGQVATQEEKDSAMDLIYQLEALNPTPD-ATNVNIIGGVWELVYSDSQPFRSSPFFMAIGELFGEE-KDRAETLFAFHRAATSIGEIGRVRQTISEAM--LVSEIDLKVGVFPGLPVSLTGTVVTKARLSPI 396 NRG AT EE + +DL+ QLEALNPT D A N G WEL YS +Q FRSSPFF+AI G++ K AE+ F H AAT+ +G+VRQ I + LVSE ++ VG+ PGLPV + GTV+T A +S I Sbjct: 78 NRGSCATTEESNLVVDLVTQLEALNPTADPAANCQ---GDWELCYSSTQSFRSSPFFLAIRSFLGDDNKQIAESAFDIHDAATTASRVGKVRQIIDKNNNELVSEYEVSVGLLPGLPVQVKGTVITSAEMSVI 207 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8964.20786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8964.20786.1 >prot_M-pyrifera_M_contig8964.20786.1 ID=prot_M-pyrifera_M_contig8964.20786.1|Name=mRNA_M-pyrifera_M_contig8964.20786.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp AQKNRGQVATQEEKDSAMDLIYQLEALNPTPDATNVNIIGGVWELVYSDSback to top mRNA from alignment at M-pyrifera_M_contig8964:106..4450+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8964.20786.1 ID=mRNA_M-pyrifera_M_contig8964.20786.1|Name=mRNA_M-pyrifera_M_contig8964.20786.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4345bp|location=Sequence derived from alignment at M-pyrifera_M_contig8964:106..4450+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8964:106..4450+ >mRNA_M-pyrifera_M_contig8964.20786.1 ID=mRNA_M-pyrifera_M_contig8964.20786.1|Name=mRNA_M-pyrifera_M_contig8964.20786.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig8964:106..4450+ (Macrocystis pyrifera P11B4 male)back to top |