mRNA_M-pyrifera_M_contig89412.20725.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89412.20725.1
Unique NamemRNA_M-pyrifera_M_contig89412.20725.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig89412.20725.1 vs. uniprot
Match: A0A7S1CLH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CLH6_9STRA)

HSP 1 Score: 150 bits (380), Expect = 6.420e-44
Identity = 68/126 (53.97%), Postives = 94/126 (74.60%), Query Frame = 1 
Query:    1 PAEARIPSRKWQFHVFKESEDAHSVIPVHSQSAYLFGKDDGIADIPTLHPTCSRQHAVLQFRLVTLPPKPPKFPAPRKTVKPYIMDLETTNGTFINGERIPTARYVELKPKDVLTFAHSTREYVLL 378
            P EAR+P  +W+ +VFK  ++    + +H QSA+LFG+D+ +AD+   HP+CS+QHAVLQFRLV  PP+P +    R+ VKPY+MDLE+TNGT +NG+ I  ARYVEL+  D+L F HS+REYVL+
Sbjct:   48 PPEARVPQTRWRLYVFKRGKEVAKPLHLHRQSAFLFGRDETVADVLLEHPSCSKQHAVLQFRLVDAPPRPDRPLETRRVVKPYVMDLESTNGTRLNGKAIEGARYVELRASDMLQFGHSSREYVLV 173
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BLAST of mRNA_M-pyrifera_M_contig89412.20725.1 vs. uniprot
Match: A0A433PVJ5_9FUNG (FHA domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PVJ5_9FUNG)

HSP 1 Score: 147 bits (371), Expect = 2.660e-41
Identity = 72/128 (56.25%), Postives = 96/128 (75.00%), Query Frame = 1 
Query:    1 PAEARIPSRKWQFHVFKESEDAHSVIPVHSQSAYLFGKDDGIADIPTLHPTCSRQHAVLQFRLVTLPPKPPKFPAP-RKTVKPYIMDLETTNGTFINGERIPTARYVELKPKDVLTFAHSTREYVLLY 381
            PAEAR PS++W+ +VFK  +    ++ +H QSA+LFG+D  +ADIP  HP+CS+QHAVLQ+R V   P+  K     R+ +KP+I+DLE TNGT +N +RIP +RYVEL+PKDVL F HSTREYVLL+
Sbjct:  153 PAEARKPSKRWRLYVFKGDQQT-DLLHIHRQSAFLFGRDRVVADIPVDHPSCSKQHAVLQYRQV---PETDKVTGQVRRVIKPFIIDLEATNGTLLNDQRIPASRYVELRPKDVLKFGHSTREYVLLH 276
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BLAST of mRNA_M-pyrifera_M_contig89412.20725.1 vs. uniprot
Match: A0A4P9XXI8_9FUNG (SMAD/FHA domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XXI8_9FUNG)

HSP 1 Score: 145 bits (367), Expect = 5.860e-41
Identity = 72/127 (56.69%), Postives = 95/127 (74.80%), Query Frame = 1 
Query:    1 PAEARIPSRKWQFHVFKESEDAHSVIPVHSQSAYLFGKDDGIADIPTLHPTCSRQHAVLQFRLVT-LPPKPPKFPAPRKTVKPYIMDLETTNGTFINGERIPTARYVELKPKDVLTFAHSTREYVLL 378
            P+EAR P+ +W+ +VFK ++D   ++ +H QSAYL GKD  IADIP  HP+CS+QHAV+QFRL+T   P       P++ +KP+I+DLE+TNGTF+N ERIP +RY EL+PKD L F  STREYVLL
Sbjct:  104 PSEARKPTARWRLYVFK-NDDHLDLLHIHRQSAYLLGKDRRIADIPIDHPSCSKQHAVIQFRLMTEQTPVGQVGEPPKRVIKPFIIDLESTNGTFVNDERIPASRYYELRPKDTLRFGCSTREYVLL 229
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BLAST of mRNA_M-pyrifera_M_contig89412.20725.1 vs. uniprot
Match: A0A3R7PMP7_PENVA (Putative smad nuclear-interacting protein 1 n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7PMP7_PENVA)

HSP 1 Score: 147 bits (371), Expect = 1.130e-40
Identity = 72/132 (54.55%), Postives = 95/132 (71.97%), Query Frame = 1 
Query:    1 PAEARIPSRKWQFHVFKESEDAHSVIPVHSQSAYLFGKDDGIADIPTLHPTCSRQHAVLQFRLVTLPPKPPKFPAPRKTVKPYIMDLETTNGTFINGERIPTARYVELKPKDVLTFAHSTREYVLLYHGMKG 396
            P EAR P R+W++++FK  ED    +P+H QSAYL G+D  +ADIPT HP+CS+QHAVLQ+RLVT   +        +TVKPYI+DLE+ NGT++N  RI   RYVEL  KDV+ F +S+REY+LL+ G KG
Sbjct:  196 PPEARKPKRRWRWYIFKGEEDL-PFLPLHRQSAYLIGRDRKVADIPTDHPSCSKQHAVLQYRLVTYNREDG---TKGRTVKPYILDLESANGTYVNNRRIEPRRYVELLEKDVVKFGYSSREYILLHEGSKG 323
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BLAST of mRNA_M-pyrifera_M_contig89412.20725.1 vs. uniprot
Match: A0A8H7SVA8_9FUNG (FHA domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SVA8_9FUNG)

HSP 1 Score: 145 bits (365), Expect = 1.140e-40
Identity = 70/127 (55.12%), Postives = 93/127 (73.23%), Query Frame = 1 
Query:    1 PAEARIPSRKWQFHVFKESEDAHSVIPVHSQSAYLFGKDDGIADIPTLHPTCSRQHAVLQFRLVTLPPKPPKFPAPRKTVKPYIMDLETTNGTFINGERIPTARYVELKPKDVLTFAHSTREYVLLY 381
            P+EA +P  KW+ +VFK  E    ++ +H QS+YL G+D  + DIP  HP+CS+QHAV+Q+RL+T      K   P+K VKP+I+DLE TNGTF+NGE+IP+ R+VELK KDVL F  STREYVLL+
Sbjct:  134 PSEAAVPKTKWRLYVFKGDEQI-DLLHIHRQSSYLIGRDRVVVDIPVDHPSCSKQHAVIQYRLMTEDADTAK---PKKVVKPFIIDLEATNGTFLNGEQIPSTRFVELKAKDVLKFGSSTREYVLLH 256
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BLAST of mRNA_M-pyrifera_M_contig89412.20725.1 vs. uniprot
Match: A0A8H7QSL0_9FUNG (FHA domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QSL0_9FUNG)

HSP 1 Score: 146 bits (368), Expect = 1.200e-40
Identity = 72/127 (56.69%), Postives = 94/127 (74.02%), Query Frame = 1 
Query:    1 PAEARIPSRKWQFHVFKESEDAHSVIPVHSQSAYLFGKDDGIADIPTLHPTCSRQHAVLQFRLVTLPPKPPKFPAPRKTVKPYIMDLETTNGTFINGERIPTARYVELKPKDVLTFAHSTREYVLLY 381
            PAEA +P  KW+ +VFK +E    ++ +H QSAYL G+D  + DIP  HP+CS+QHAV+Q+R VT   +  K   P+K VKP+I+DLE TNGTFING++IP+ R+VELK KDVL F  STREYVLL+
Sbjct:  177 PAEAAVPKTKWRLYVFKGNEQI-DLLHIHRQSAYLIGRDRVVVDIPVDHPSCSKQHAVIQYRTVTEEGENGK---PKKVVKPFIIDLEATNGTFINGDQIPSTRFVELKAKDVLKFGSSTREYVLLH 299
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BLAST of mRNA_M-pyrifera_M_contig89412.20725.1 vs. uniprot
Match: A0A2G4SZE9_RHIZD (SMAD/FHA domain-containing protein n=4 Tax=Rhizopus TaxID=4842 RepID=A0A2G4SZE9_RHIZD)

HSP 1 Score: 143 bits (361), Expect = 2.210e-40
Identity = 68/127 (53.54%), Postives = 93/127 (73.23%), Query Frame = 1 
Query:    1 PAEARIPSRKWQFHVFKESEDAHSVIPVHSQSAYLFGKDDGIADIPTLHPTCSRQHAVLQFRLVTLPPKPPKFPAPRKTVKPYIMDLETTNGTFINGERIPTARYVELKPKDVLTFAHSTREYVLLY 381
            P EA  P +KW+ +VFK+ E    ++ +H QS+YL G+D  + DIP  HP+CS+QHAV+Q+R V    +  KF   RK +KP+I+DLE TNGTF+NGE+IPT R++ELKP+DVL F  STR+YVLL+
Sbjct:  106 PPEAAKPDKKWRLYVFKKDEQI-DLLHIHRQSSYLIGRDRVVVDIPVDHPSCSKQHAVIQYREVDEKDESGKF---RKVIKPFIIDLEATNGTFLNGEQIPTTRFIELKPQDVLKFGSSTRDYVLLH 228
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BLAST of mRNA_M-pyrifera_M_contig89412.20725.1 vs. uniprot
Match: UPI000F68ECA0 (LOW QUALITY PROTEIN: smad nuclear-interacting protein 1-like n=1 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F68ECA0)

HSP 1 Score: 143 bits (360), Expect = 3.790e-40
Identity = 70/132 (53.03%), Postives = 93/132 (70.45%), Query Frame = 1 
Query:    1 PAEARIPSRKWQFHVFKESEDAHSVIPVHSQSAYLFGKDDGIADIPTLHPTCSRQHAVLQFRLVTLPPKPPKFPAPRKTVKPYIMDLETTNGTFINGERIPTARYVELKPKDVLTFAHSTREYVLLYHGMKG 396
            P EA  P R+W++++FK  ED    +P+H QSAYL G+D  +AD PT HP+CS+QHAVLQ+RLVT   +        +TVKPYI+DLE+ NGT++N  RI   RYVEL  KDV+ F +S+REY+LL+ G KG
Sbjct:   41 PPEAXKPKRRWRWYIFKGEEDL-PFLPLHRQSAYLIGRDRKVADXPTDHPSCSKQHAVLQYRLVTYNREDG---TKGRTVKPYILDLESANGTYVNNRRIEPRRYVELLEKDVVKFGYSSREYILLHEGSKG 168
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BLAST of mRNA_M-pyrifera_M_contig89412.20725.1 vs. uniprot
Match: A0A162WUC2_PHYB8 (FHA domain-containing protein (Fragment) n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162WUC2_PHYB8)

HSP 1 Score: 140 bits (352), Expect = 4.330e-40
Identity = 70/127 (55.12%), Postives = 91/127 (71.65%), Query Frame = 1 
Query:    1 PAEARIPSRKWQFHVFKESEDAHSVIPVHSQSAYLFGKDDGIADIPTLHPTCSRQHAVLQFRLVTLPPKPPKFPAPRKTVKPYIMDLETTNGTFINGERIPTARYVELKPKDVLTFAHSTREYVLLY 381
            P EA  P ++W+F+VFK  E    ++ +H QSA+L G+D  + DIP  HP+CS+QHAVLQFR V      PK    R  VKP+++DLE+TNGTF+NG RIP+ RYVEL+ KDVL F +STREYVLL+
Sbjct:   21 PPEAAKPKQQWRFYVFKGDEQIE-LLHIHRQSAFLIGRDRVVLDIPVDHPSCSKQHAVLQFRRVA--ESDPKSNNVRHVVKPFVIDLESTNGTFLNGTRIPSTRYVELRLKDVLKFGNSTREYVLLH 144
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BLAST of mRNA_M-pyrifera_M_contig89412.20725.1 vs. uniprot
Match: A0A5A8C5D9_CAFRO (FHA domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C5D9_CAFRO)

HSP 1 Score: 140 bits (354), Expect = 6.880e-40
Identity = 68/132 (51.52%), Postives = 89/132 (67.42%), Query Frame = 1 
Query:    1 PAEARIPSRKWQFHVFKESEDAHSVIPVHSQSAYLFGKDDGIADIPTLHPTCSRQHAVLQFRLVTLPPKPPKFPAPRKTVKPYIMDLETTNGTFINGERIPTARYVELKPKDVLTFAHSTREYVLLYHGMKG 396
            P +A +PS +W+ HVFK+ E     + V  QSA+LFGKD  + D+ T HPTCSRQHAVLQ+R+V +          R+ VKPYIMDL +TNGT++NGER+   RY+EL+  D L F  STREYVLL+  + G
Sbjct:   51 PPDASMPSLRWRLHVFKDGEQLDKPLHVSRQSAFLFGKDPVVTDVLTAHPTCSRQHAVLQYRMVEVEDATAAGGV-RRVVKPYIMDLASTNGTWLNGERVDDRRYIELRAMDTLRFGESTREYVLLHDQLAG 181
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89412.20725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1CLH6_9STRA6.420e-4453.97Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A433PVJ5_9FUNG2.660e-4156.25FHA domain-containing protein n=1 Tax=Endogone sp.... [more]
A0A4P9XXI8_9FUNG5.860e-4156.69SMAD/FHA domain-containing protein n=1 Tax=Thamnoc... [more]
A0A3R7PMP7_PENVA1.130e-4054.55Putative smad nuclear-interacting protein 1 n=1 Ta... [more]
A0A8H7SVA8_9FUNG1.140e-4055.12FHA domain-containing protein n=1 Tax=Thamnidium e... [more]
A0A8H7QSL0_9FUNG1.200e-4056.69FHA domain-containing protein n=1 Tax=Mucor saturn... [more]
A0A2G4SZE9_RHIZD2.210e-4053.54SMAD/FHA domain-containing protein n=4 Tax=Rhizopu... [more]
UPI000F68ECA03.790e-4053.03LOW QUALITY PROTEIN: smad nuclear-interacting prot... [more]
A0A162WUC2_PHYB84.330e-4055.12FHA domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A5A8C5D9_CAFRO6.880e-4051.52FHA domain-containing protein n=3 Tax=Cafeteria ro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89412contigM-pyrifera_M_contig89412:1..399 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score140.2
Seed ortholog evalue7e-31
Seed eggNOG ortholog36080.S2J9E6
KEGG koko:K13108
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0016071,GO:0031503,GO:0032991,GO:0033036,GO:0034613,GO:0034641,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051028,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051235,GO:0051236,GO:0051237,GO:0051641,GO:0051649,GO:0065007,GO:0065008,GO:0070274,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0090304,GO:0097159,GO:1901360,GO:1901363
EggNOG free text desc.fha domain-containing protein
EggNOG OGs1GUE7@112252,392I3@33154,3P0KY@4751,KOG1882@1,KOG1882@2759
COG Functional cat.T
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Exons1
Model size399
Cds size399
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816804.3383908-CDS-M-pyrifera_M_contig89412:0..3991622816804.3383908-CDS-M-pyrifera_M_contig89412:0..399Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89412 1..399 +
1692278188.4333558-CDS-M-pyrifera_M_contig89412:0..3991692278188.4333558-CDS-M-pyrifera_M_contig89412:0..399Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89412 1..399 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89412.20725.1prot_M-pyrifera_M_contig89412.20725.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89412 1..399 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89412.20725.1

>prot_M-pyrifera_M_contig89412.20725.1 ID=prot_M-pyrifera_M_contig89412.20725.1|Name=mRNA_M-pyrifera_M_contig89412.20725.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp
PAEARIPSRKWQFHVFKESEDAHSVIPVHSQSAYLFGKDDGIADIPTLHP
TCSRQHAVLQFRLVTLPPKPPKFPAPRKTVKPYIMDLETTNGTFINGERI
PTARYVELKPKDVLTFAHSTREYVLLYHGMKG*
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mRNA from alignment at M-pyrifera_M_contig89412:1..399+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89412.20725.1 ID=mRNA_M-pyrifera_M_contig89412.20725.1|Name=mRNA_M-pyrifera_M_contig89412.20725.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=399bp|location=Sequence derived from alignment at M-pyrifera_M_contig89412:1..399+ (Macrocystis pyrifera P11B4 male)
CCTGCAGAAGCTCGGATTCCGTCTCGAAAATGGCAGTTTCACGTGTTTAA
GGAATCGGAAGATGCACACAGTGTAATTCCAGTGCATTCGCAGTCTGCAT
ATTTGTTTGGAAAGGATGATGGCATTGCCGACATTCCCACGCTCCACCCC
ACATGCTCAAGACAACACGCAGTGCTTCAATTTCGCCTCGTCACCCTTCC
TCCAAAACCACCAAAATTCCCAGCACCTCGAAAAACCGTTAAACCCTACA
TTATGGACCTCGAAACCACCAACGGCACCTTTATCAACGGAGAACGCATT
CCCACAGCCCGTTACGTTGAGCTCAAACCGAAAGATGTTCTCACATTCGC
ACATTCCACCCGAGAATATGTCCTCCTCTACCATGGAATGAAGGGATAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89412:1..399+

>mRNA_M-pyrifera_M_contig89412.20725.1 ID=mRNA_M-pyrifera_M_contig89412.20725.1|Name=mRNA_M-pyrifera_M_contig89412.20725.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig89412:1..399+ (Macrocystis pyrifera P11B4 male)
CCTGCAGAAGCTCGGATTCCGTCTCGAAAATGGCAGTTTCACGTGTTTAA
GGAATCGGAAGATGCACACAGTGTAATTCCAGTGCATTCGCAGTCTGCAT
ATTTGTTTGGAAAGGATGATGGCATTGCCGACATTCCCACGCTCCACCCC
ACATGCTCAAGACAACACGCAGTGCTTCAATTTCGCCTCGTCACCCTTCC
TCCAAAACCACCAAAATTCCCAGCACCTCGAAAAACCGTTAAACCCTACA
TTATGGACCTCGAAACCACCAACGGCACCTTTATCAACGGAGAACGCATT
CCCACAGCCCGTTACGTTGAGCTCAAACCGAAAGATGTTCTCACATTCGC
ACATTCCACCCGAGAATATGTCCTCCTCTACCATGGAATGAAGGGATAGC
CTGCAGAAGCTCGGATTCCGTCTCGAAAATGGCAGTTTCACGTGTTTAAG
GAATCGGAAGATGCACACAGTGTAATTCCAGTGCATTCGCAGTCTGCATA
TTTGTTTGGAAAGGATGATGGCATTGCCGACATTCCCACGCTCCACCCCA
CATGCTCAAGACAACACGCAGTGCTTCAATTTCGCCTCGTCACCCTTCCT
CCAAAACCACCAAAATTCCCAGCACCTCGAAAAACCGTTAAACCCTACAT
TATGGACCTCGAAACCACCAACGGCACCTTTATCAACGGAGAACGCATTC
CCACAGCCCGTTACGTTGAGCTCAAACCGAAAGATGTTCTCACATTCGCA
CATTCCACCCGAGAATATGTCCTCCTCTACCATGGAATGAAGGGATAG
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