mRNA_M-pyrifera_M_contig8940.20718.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8940.20718.1
Unique NamemRNA_M-pyrifera_M_contig8940.20718.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8940.20718.1 vs. uniprot
Match: D7FJQ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ9_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 1.150e-111
Identity = 179/228 (78.51%), Postives = 196/228 (85.96%), Query Frame = 1 
Query:    1 CHAAARSQTSSRTSCRMTEEGGESPAEGEKKGKTKPPAWMFNDQGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLYAKRVSDDEVELTWKTGNEKGNVGFIVSRRAAKTEGWEEIASFTDFPPLNSKGWGGGTYNYLDEGVSEGTWVYRVSDMSKSGNRSDLCQTLIELQSSSDALQTKIGLAGLVVVLAVGVAAGTFIDPFA 684
            C  A+   TSS TSCRMT++     AEG+KK KTKPPAWMFND GVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGL AKRVSD+ VELTWKTGNE+GN+GFIVSRRAAKT+ W+EIAS+ DFPPLNSKG GGG Y Y D+ V  GTWVYR+SD+SKSG +SDLCQTLIELQS +D LQTKIG+AGL +VL    AAGTFIDPFA
Sbjct:   42 CSKASARGTSS-TSCRMTKKTETEGAEGDKK-KTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKGPGGGIYTYADDNVDLGTWVYRISDISKSGVKSDLCQTLIELQSGADELQTKIGVAGLAIVLIAAAAAGTFIDPFA 267
[Close]
BLAST of mRNA_M-pyrifera_M_contig8940.20718.1 vs. uniprot
Match: A0A835Z5V8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V8_9STRA)

HSP 1 Score: 234 bits (597), Expect = 2.290e-69
Identity = 112/192 (58.33%), Postives = 146/192 (76.04%), Query Frame = 1 
Query:  103 KPPAWMFNDQGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLYAKRVSDDEVELTWKTGNEKGNVGFIVSRRAAKTEGWEEIASFTDFPPLNSKGWGGGTYNYLDEGVSEGTWVYRVSDMSKSGNRSDLCQTLIELQSSSDALQTKIGLAGLVVVLAVGVAAGTFIDP 678
            K P WM+N  GVAYAPWMVD FDPEN+AKV A++EAR+  + NTV E++G LARDPQ MELSG GL  K+V+ ++VEL WKTG+E GN+GF+VS+R  KT+ W +IAS+ D+ PLNSKG  GG Y ++D    +GTWVYRVSD++ +G+R+DLCQ LIE+QS+SDALQ K  +A   VV+   +A+   IDP
Sbjct:   70 KGPTWMYNKNGVAYAPWMVDTFDPENIAKVEAAMEARRLAKLNTVAESVGDLARDPQAMELSGLGLNIKQVNGNDVELEWKTGDEAGNLGFVVSKRRGKTDEWTQIASYKDWAPLNSKGEQGGRYTFVDPDCEQGTWVYRVSDVNSNGSRNDLCQALIEVQSASDALQAKAAVALFGVVVVAAIASAFLIDP 261
[Close]
BLAST of mRNA_M-pyrifera_M_contig8940.20718.1 vs. uniprot
Match: A0A6V1RAY1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RAY1_HETAK)

HSP 1 Score: 178 bits (451), Expect = 4.030e-48
Identity = 90/194 (46.39%), Postives = 119/194 (61.34%), Query Frame = 1 
Query:   97 KTKPPAWMFNDQGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLYAKRVSDDEVELTWKTGNEKGNVGFIVSRRAAKTEGWEEIASFTDFPPLNSKGWGGGTYNYLDEGVSEGTWVYRVSDMSKSGNRSDLCQTLIELQSSSDALQTKIGLAGLVVVLAVGVAAGTFIDP 678
            + K P  MFN +G  YAPWM+D+ D E   +      ARK  E      A GAL  DPQ MELSG GL  K V D E E++W TG+E GN GFI+++R   ++ W+ +AS+TD+ PLNSKG  GG Y Y+D    +GTW+YRVSD++  G  SDLCQ L+E+Q     + TK    G++ V    +AAG F+DP
Sbjct:   67 RRKAPKGMFNAEGKPYAPWMMDSVDAEKAKQAQEDRRARKAAEKKA---AQGALLVDPQAMELSGVGLKTKMVGD-ECEISWGTGDETGNKGFIITKRRGGSDDWQVVASYTDWAPLNSKGPAGGQYTYMDSDTEQGTWIYRVSDVNTQGQTSDLCQALVEVQDQGQQMATKAFAVGIIGVFGALLAAGLFLDP 256
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BLAST of mRNA_M-pyrifera_M_contig8940.20718.1 vs. uniprot
Match: A0A6U6HGE7_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6HGE7_9STRA)

HSP 1 Score: 151 bits (381), Expect = 7.010e-38
Identity = 89/198 (44.95%), Postives = 116/198 (58.59%), Query Frame = 1 
Query:   97 KTKPPAWMFNDQGVAYAPWM-VDAFDPENLAKVAAS-IEARKEKEANTVPEALGALARDPQQMELSGAGLYAKRVSDDEVELTWKTGNEKGNVGFIVSRRAAKTEGWEEIASFTDFPPLNSKGWGGGTYNYLDEGVSEGTWVYRVSDMSKSGNRSDLCQTLIELQSSSDALQTKIGLAGLVVVLAVGVAAGTFIDPFA 684
            KTK  + + N  GV YAPWM + A D   + ++     EAR+ +E     E  G L  D Q  ELSG GL  K + D EVEL W T  EK   GFIV RR AKT  +  +AS+ ++ PL SKG  GG Y YLD+ VS G WVYR+S++   G+ SDLCQ L+E+Q+  +    KI   G+VV+    VAAG  +DP+A
Sbjct:   85 KTKKISNLRNANGVDYAPWMNISAEDESKIRQIMKEKAEARRLREEQE-REVSGNLYFDSQAQELSGTGLKGK-IIDGEVELEWATRTEKDTRGFIVKRRPAKTSEFSPLASYEEWGPLQSKGEEGGIYRYLDDTVSPGGWVYRISEVDNMGSESDLCQCLVEVQTEEEQAAAKIAAIGIVVIGVAAVAAGLILDPYA 280
[Close]
BLAST of mRNA_M-pyrifera_M_contig8940.20718.1 vs. uniprot
Match: A0A7S3ZJZ7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJZ7_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.340e-37
Identity = 76/188 (40.43%), Postives = 113/188 (60.11%), Query Frame = 1 
Query:  118 MFNDQGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGAL-ARDPQQMELSGAGLYAKRVSDDEVELTWKTGNEKGNVGFIVSRRAAKTEGWEEIASFTDFPPLNSKGWGGGTYNYLDEGVSEGTWVYRVSDMSKSGNRSDLCQTLIELQSSSDALQTKIGLAGLVVVLAVGVAAGTFIDP 678
            ++N++GVAYAPWMV   D + +A   A     K +E   + E  G +   D    EL+G GL AK +S+DEVELTW T +E+ N GF+V R+A     W+E+AS+  + PL SKG  GG Y+Y+D  VSEG W+YR+       +R+ +CQ  + +++S   LQTK+ + G   ++   +AAG  +DP
Sbjct:   91 LYNEEGVAYAPWMVRQVDEDAVAAARAMRGYEKRRERIALEEKQGTINILDAASSELTGLGLKAKVLSEDEVELTWSTDDEEANRGFLVERKAVGYSDWDEVASYQSWSPLKSKGTLGGAYSYIDATVSEGEWLYRIVAEQSDNSRAIVCQVGVSVENSGQQLQTKLVVGGFAALVLGALAAGALLDP 278
[Close]
BLAST of mRNA_M-pyrifera_M_contig8940.20718.1 vs. uniprot
Match: A0A7S2RGG7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGG7_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.170e-36
Identity = 77/188 (40.96%), Postives = 113/188 (60.11%), Query Frame = 1 
Query:  118 MFNDQGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGAL-ARDPQQMELSGAGLYAKRVSDDEVELTWKTGNEKGNVGFIVSRRAAKTEGWEEIASFTDFPPLNSKGWGGGTYNYLDEGVSEGTWVYRVSDMSKSGNRSDLCQTLIELQSSSDALQTKIGLAGLVVVLAVGVAAGTFIDP 678
            M+N+ GVAYAPWMV+  D E         + RK+++       +GA+ + D    EL+G+GL  + V + EVEL+W T  E  N+G+ V +R A++E W +IAS+ D+ PL SKG  GGTY++LD    +G W+YR+ D+  SG  + LCQ L+E+QS+ +     +   G   + A  VAAGT IDP
Sbjct:   76 MYNENGVAYAPWMVNQIDEEAYLAAKELRKMRKKRDREASEAKIGAMVSSDVAADELAGSGLKYRFVGE-EVELSWSTNTEPDNLGYKVQKRVARSEDWIDIASYEDWAPLASKGAAGGTYSFLDPNSEQGDWIYRIIDVDGSGRSTILCQALVEVQSAGERTLQLVLAGGFAAIFAGLVAAGTMIDP 262
[Close]
BLAST of mRNA_M-pyrifera_M_contig8940.20718.1 vs. uniprot
Match: B8BXV5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV5_THAPS)

HSP 1 Score: 144 bits (362), Expect = 1.290e-35
Identity = 88/198 (44.44%), Postives = 110/198 (55.56%), Query Frame = 1 
Query:   97 KTKPPAWMFNDQGVAYAPWMVDAFDPEN----LAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLYAKRVSDDEVELTWKTGNEKGNVGFIVSRRAAKTEGWEEIASFTDFPPLNSKGWGGGTYNYLDEGVSEGTWVYRVSDMSKSGNRSDLCQTLIELQSSSDALQTKIGLAGLVVVLAVGVAAGTFIDP 678
            K K  + + N+ GV YAPWM  + D EN    L K   +    +E +A  V    G L RD Q  ELSG GL  K + D EVEL W T +E    GFIV RRAAKT  ++ IAS+ D+ PL SKG  GG Y YLD   + G WVYRVS+    GN++D+CQ L+E+Q+  +  Q  I   G  V   V V AG   DP
Sbjct:   49 KNKRMSNLRNENGVDYAPWMGISEDDENKIRALMKERTAARRARELQARDVT---GNLFRDSQAQELSGTGLSYK-IIDGEVELEWATKSEMDTKGFIVKRRAAKTNDYDVIASYKDWGPLASKGKEGGIYRYLDSTATPGGWVYRVSEEDSMGNQADICQCLVEVQTEDEQKQALIAGVGFAVFAVVAVIAGIAADP 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig8940.20718.1 vs. uniprot
Match: A0A7S2FT64_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FT64_9STRA)

HSP 1 Score: 143 bits (360), Expect = 5.650e-35
Identity = 79/190 (41.58%), Postives = 113/190 (59.47%), Query Frame = 1 
Query:  118 MFNDQGVAYAPWMVDAFDPENL--AKVAASIEARKEKEANTVPEALGA-LARDPQQMELSGAGLYAKRVSDDEVELTWKTGNEKGNVGFIVSRRAAKTEGWEEIASFTDFPPLNSKGWGGGTYNYLDEGVSEGTWVYRVSDMSKSGNRSDLCQTLIELQSSSDALQTKIGLAGLVVVLAVGVAAGTFIDP 678
            MFN+ GVAYAPWMV+  D E    AK    +    +K A+   E  GA    D Q  ELSG GL  K ++ +EVEL+W T  E  N+G+ V +RAA++E W  +AS+ D+ PLNSKG GGGTY  +D     G W+YR+ D+ ++G  + LCQ L+E+QS  + + + +   G   + +  +AAG  +DP
Sbjct:   90 MFNENGVAYAPWMVNQIDEEAYVTAKELRKMRKNAQKAADASKE--GAYFTTDLQADELSGLGLNYK-LNGEEVELSWSTDTEPDNLGYKVQKRAARSEEWFTVASYEDWAPLNSKGKGGGTYTLIDPESETGDWIYRIVDVDRAGRNTVLCQALVEVQSQGEKVLSTVLAVGFAAIFSGFMAAGGLLDP 276
[Close]
BLAST of mRNA_M-pyrifera_M_contig8940.20718.1 vs. uniprot
Match: A0A448YZW3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZW3_9STRA)

HSP 1 Score: 143 bits (360), Expect = 6.090e-35
Identity = 84/201 (41.79%), Postives = 114/201 (56.72%), Query Frame = 1 
Query:   97 KTKPPAWMFNDQGVAYAPWMVDAFDPENLAKV-------AASIEARKEKEANTVPEALGALARDPQQMELSGAGLYAKRVSDDEVELTWKTGNEKGNVGFIVSRRAAKTEGWEEIASFTDFPPLNSKGWGGGTYNYLDEGVSEGTWVYRVSDMSKSGNRSDLCQTLIELQSSSDALQTKIGLAGLVVVLAVGVAAGTFIDP 678
            K K  + + N  GV YAPWM     PE  A++       A +   RK++EA       GAL  D Q  ELSG GL  K VS++EVELTW T +E    GF + RR A+TE +  IAS+  + PL SKG  GG Y+YLD+ +S G WVYR+++   SG  +D+CQ L+E+Q+  +     I   G+VV+     AAG  +DP
Sbjct:   83 KMKRASNLRNANGVEYAPWM--NITPEAEAEIKTVMKQKAEARRKRKDQEAGVS----GALLMDSQAQELSGGGLNCKVVSNNEVELTWATSSEASTKGFAIKRRKARTEDFVTIASYESWGPLASKGVDGGQYSYLDDTISPGGWVYRITECETSGAENDICQALVEVQTEDEQRGAVIAAVGIVVLAIGAFAAGIMLDP 277
[Close]
BLAST of mRNA_M-pyrifera_M_contig8940.20718.1 vs. uniprot
Match: A0A7R9W2U1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2U1_9STRA)

HSP 1 Score: 144 bits (363), Expect = 7.870e-35
Identity = 85/198 (42.93%), Postives = 114/198 (57.58%), Query Frame = 1 
Query:   97 KTKPPAWMFNDQGVAYAPWM-VDAFDPENLAKVAAS-IEARKEKEANTVPEALGALARDPQQMELSGAGLYAKRVSDDEVELTWKTGNEKGNVGFIVSRRAAKTEGWEEIASFTDFPPLNSKGWGGGTYNYLDEGVSEGTWVYRVSDMSKSGNRSDLCQTLIELQSSSDALQTKIGLAGLVVVLAVGVAAGTFIDPFA 684
            KTK  + + N QGV YAPWM + A D + + +V     EAR+++E        G L  D Q  ELSG GL +K + D EVEL W T  E+   GFIV RR AKT  +E +AS+ D+ PL SKG  GG Y YLD  V+ G WVYR+S++  SG  +DLCQ L+E+Q+  +         G+ +     V AG  +DP+A
Sbjct:  136 KTKKISNLRNAQGVDYAPWMGISAEDEDKIRQVVKEKAEARRKREEQE-RSVSGNLYYDSQAQELSGTGLNSK-IIDGEVELEWATRTERDTKGFIVKRRPAKTNEFEPLASYEDWGPLQSKGAEGGVYRYLDNTVTPGGWVYRISEVDNSGMEADLCQCLVEVQTEEEQKAALFAGVGIALFGVAAVVAGLVLDPYA 331
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8940.20718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJQ9_ECTSI1.150e-11178.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z5V8_9STRA2.290e-6958.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1RAY1_HETAK4.030e-4846.39Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U6HGE7_9STRA7.010e-3844.95Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S3ZJZ7_9STRA1.340e-3740.43Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2RGG7_9STRA2.170e-3640.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8BXV5_THAPS1.290e-3544.44Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2FT64_9STRA5.650e-3541.58Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A448YZW3_9STRA6.090e-3541.79Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7R9W2U1_9STRA7.870e-3542.93Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8940contigM-pyrifera_M_contig8940:2935..7719 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score337.0
Seed ortholog evalue6.3e-90
Seed eggNOG ortholog2880.D7FJQ9
Hectar predicted targeting categoryother localisation
EggNOG OGs2CYRZ@1,2S61B@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_010550.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1787
Cds size642
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8940.20718.1prot_M-pyrifera_M_contig8940.20718.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8940 4032..7671 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816803.991912-UTR-M-pyrifera_M_contig8940:2934..40311622816803.991912-UTR-M-pyrifera_M_contig8940:2934..4031Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8940 2935..4031 -
1692278188.2519057-UTR-M-pyrifera_M_contig8940:2934..40311692278188.2519057-UTR-M-pyrifera_M_contig8940:2934..4031Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8940 2935..4031 -
1622816804.08302-UTR-M-pyrifera_M_contig8940:7671..77191622816804.08302-UTR-M-pyrifera_M_contig8940:7671..7719Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8940 7672..7719 -
1692278188.3353586-UTR-M-pyrifera_M_contig8940:7671..77191692278188.3353586-UTR-M-pyrifera_M_contig8940:7671..7719Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8940 7672..7719 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816804.002329-CDS-M-pyrifera_M_contig8940:4031..41151622816804.002329-CDS-M-pyrifera_M_contig8940:4031..4115Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8940 4032..4115 -
1692278188.2696111-CDS-M-pyrifera_M_contig8940:4031..41151692278188.2696111-CDS-M-pyrifera_M_contig8940:4031..4115Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8940 4032..4115 -
1622816804.014754-CDS-M-pyrifera_M_contig8940:4834..49011622816804.014754-CDS-M-pyrifera_M_contig8940:4834..4901Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8940 4835..4901 -
1692278188.278648-CDS-M-pyrifera_M_contig8940:4834..49011692278188.278648-CDS-M-pyrifera_M_contig8940:4834..4901Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8940 4835..4901 -
1622816804.0270798-CDS-M-pyrifera_M_contig8940:5674..57511622816804.0270798-CDS-M-pyrifera_M_contig8940:5674..5751Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8940 5675..5751 -
1692278188.2879257-CDS-M-pyrifera_M_contig8940:5674..57511692278188.2879257-CDS-M-pyrifera_M_contig8940:5674..5751Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8940 5675..5751 -
1622816804.041371-CDS-M-pyrifera_M_contig8940:5894..60801622816804.041371-CDS-M-pyrifera_M_contig8940:5894..6080Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8940 5895..6080 -
1692278188.2971969-CDS-M-pyrifera_M_contig8940:5894..60801692278188.2971969-CDS-M-pyrifera_M_contig8940:5894..6080Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8940 5895..6080 -
1622816804.054705-CDS-M-pyrifera_M_contig8940:6460..65591622816804.054705-CDS-M-pyrifera_M_contig8940:6460..6559Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8940 6461..6559 -
1692278188.3072398-CDS-M-pyrifera_M_contig8940:6460..65591692278188.3072398-CDS-M-pyrifera_M_contig8940:6460..6559Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8940 6461..6559 -
1622816804.070204-CDS-M-pyrifera_M_contig8940:7542..76711622816804.070204-CDS-M-pyrifera_M_contig8940:7542..7671Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8940 7543..7671 -
1692278188.318844-CDS-M-pyrifera_M_contig8940:7542..76711692278188.318844-CDS-M-pyrifera_M_contig8940:7542..7671Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8940 7543..7671 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8940.20718.1

>prot_M-pyrifera_M_contig8940.20718.1 ID=prot_M-pyrifera_M_contig8940.20718.1|Name=mRNA_M-pyrifera_M_contig8940.20718.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=214bp
MTEEGGESPAEGEKKGKTKPPAWMFNDQGVAYAPWMVDAFDPENLAKVAA
SIEARKEKEANTVPEALGALARDPQQMELSGAGLYAKRVSDDEVELTWKT
GNEKGNVGFIVSRRAAKTEGWEEIASFTDFPPLNSKGWGGGTYNYLDEGV
SEGTWVYRVSDMSKSGNRSDLCQTLIELQSSSDALQTKIGLAGLVVVLAV
GVAAGTFIDPFAQ*
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mRNA from alignment at M-pyrifera_M_contig8940:2935..7719-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8940.20718.1 ID=mRNA_M-pyrifera_M_contig8940.20718.1|Name=mRNA_M-pyrifera_M_contig8940.20718.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4785bp|location=Sequence derived from alignment at M-pyrifera_M_contig8940:2935..7719- (Macrocystis pyrifera P11B4 male)
TGCCACGCCGCTGCACGCTCGCAGACGTCGTCGCGCACTAGCTGCAGGAT
GACGGAAGAGGGGGGGGAGTCTCCAGCGGAAGGGGAGAAGAAGGGGAAGA
CCAAGCCGCCGGCGTGGATGTTCAACGACCAAGGCGTCGCGTACGCGCCG
TGGATGGTGGACGCCTTCGACCCGGAGGTGCGTCTTCCATTGCCGGTAGT
ATGTTGTATTATACGATACGAGGTACTGCTGTGGTAGTATATTGTGCAAT
GATATCTTACAGTAGTAACTTCCTAAAAGATCGCACAAATTACTGGGATG
GATATGATCCAATGGTATCTTACAATGATATTTTACGAACAAGCCTCTCG
CTATTTCTAGGAGCTTACAATACTGTGTTACTACAGTTTAATACAACAGT
ACCGTTTGTACAAGATCGTAACATTAATAGTTCCAGGTGCCTGGAGAAAG
GGTTTAATCCTTTCGGCAGGGAAGCGGCGGTGGAGCAATAGAGCAACGCG
CATGTTTTGCGTTGCCGTGATCAGAACCCATCGCACCCCCCGTCAGTCCA
CCATCCCACCATGTTACCCGTTGGCGGCGCGCTCATACAACTCATACAAA
AATAAACGCCGCGACCGAACACCCATCACTGTAGGTTTGTGAAAGCTTAA
ACCCGCGCTTACGCCCCCCCCCCCAACAACAAAATAGGATGCAGCTGACC
CTTCATGCGACTCGCCCAACCCCTCGCGGTGCTTCGCTCTTAGCGCAAAC
AATATCTGCCTGATCGGTGAACCCGACGTGCTCCGTCCCGGCATGGTGGG
AACGCGAGGGTCTATGGTCATTCGACTACGGCCATGCGTGACATGAATAG
ATGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCA
CCCCCCCCCCCCCACCCCCTCACCTCCCACATACGACCGCCTAAGTGAAA
ANNNNNNNNNNCTCTTTTCTCTTTTTCTCCTTCTGAGTGATTGGGTTGCT
CTGTTCTCCGCTGTCCCCCCTGCCCCCCCCTGCACCCCCCCCCCCCCCCC
CCGCCCCCCCCCCGCTCAGATGAACTCCCTCTCCCCTGTATCGCGCCAAG
CTATGCCATCGCTTAACGTGAAAAGATGGTCACGTGTGATTCGTGTTTTT
TTTATAACAGAATCTGGCGAAGGTGGCGGCTTCGATCGAAGCTCGCAAGG
AGAAGGAGGCCAACACGGTGCCGGAGGCGCTCGGCGCACTCGCCCGCGAT
CCTCAACAGGTTCGAGTGTACAGAATGAAACGGTGGACACGCGAGAGAGA
TAAAGAGACAGAGACAGACAGAGACAGACAGAGAGGAAGATAAATAGGAA
CATAAGAGGGAGAGAGCGACAGGCAGGCAGGCAGGCAAGCAAGCAGACCG
GCAAGACTGACGAATATCTGCTTAGAGACACACGCGAGGGAGACATAAGA
GATAGCTATTAATGAAGAGAGAGACCTATGGAGGCAGAGACAGGCATGGG
CCCTGTCGCGGCGCCGCTCTTGCGGATATGTAAAGATATTGACAACCATC
CCCCCCTCATGCGGCTACGGCCATGCATGATATCGAGTATATACCCCCCC
CCCCCCTCCCCTCCCGCTTCTTATTGGACGCCTCCGCAGATGGAACTCTC
CGGAGCAGGCCTGTACGCGAAGAGGGTCTCGGACGACGAGGTGGAGCTGA
CGTGGAAAACGGGCAACGAAAAGGGCAACGTTGGGTTTATAGTGAGCAGG
AGGGCGGCCAAGACAGAAGGCTGGGAAGAAATCGCGTCGTTCACCGACTT
CCCCCCGCTCAACTCCAAGGGGTGGGTGTCTTTTTTTCGCTTTTTTTCTT
TTTTGTTGAATGTTTTTTCTTTCTTTCCCTTTTTTTTTCCTTCGTTTTCT
TTTTGACGCTGCTGCTGTTTCTGATACGTATCTATGTAACTTTGTCCACG
CCCCCTTGCACCAGGGAGGGAGGTGGAACTTACAACTACTTGGACGAGGG
AGTCTCGGAGGGCACGTGGGTGTACAGAGTGTCCGACATGAGCAAGTGAG
TACCTGCTTCCTCTTTCTCCTGCTCCTCCTCCTCCCCCCCCCTCCTTTTC
CTGCTCCTCCTTCTCTCCCTCTTGTGCCTTTTCGGGTTGTTCTCGACACG
TTTTGTCGTATTCGGCTCCCGTCAGTAAGGGCTTTCCACACGCGGAGGCA
GGATTTCTTGTCTTTTATGGGGTGGGAGGGGGCTCGCTGTATTGGTATCG
ATGGGTACCGGGTGGCTCCACGCGAGAGATCATGGTCGTGGTGGTTGTGG
CAGAAGGACGGAGGAGAGGGTTCGACAACTATCGGCGGACGGTGCGTTGG
TCGCGTGATGTCCCGAAACTCCCGACATTTAGAAATTAACGTTTTTCGCC
CCCCTCCCGATTTTGTCTCATCGCTGCAGGTGCCGTTTTTCTCGTTCGTA
TTTCGTATTTTACATTTTGCATTTTGCACCAGTATTTTGTATGAAATCTT
AATTGTGTTGCTCTTATGTGTAGTGCGTACTGGTACTCCGTTTTGTTCGT
TATGTTCGTATTATTCGCCGGATTGCGCGTTCAATGCTTTTCAACCTAAG
CTTTACGGTGAAGTACAGCACTGTTGATCTCGTGTATGTCAAAAACCTGA
GGTAAATAAGTTGAATACCCCCTCTACGTGACTCGGATGGGTTAATTGGG
TTGACTGGAGGGATGGATGTTTTCCATGGTAGATGATACCCTTTGACGTG
CCTATGCTTTGACTCAAGTCTCTTGCCACTGCTTTCCTTTGTTTTTGTTC
TGTGTTTATCTCCCGCAGGTCCGGAAACAGGAGTGACCTGTGTCAGACGC
TCATCGAGTTGCAGAGCAGCTCCGACGCCTTGCAGGTGGGTTGGATGATC
ATGGTTAGATGGTCAGGGTTTGGAGGGAGGGGAAGGCAGTGCATGGAACA
GCGACCGCATCAAACCAATTCTCGCACGAGAAGGGTTTATGATACCTCGT
ACTGGTACTTTTCATAGATACGTATGTAGCACCAACAAGAATTGTCCTGG
GAATGACGACGGACCCCGGAGGACACGGAGGGGTACGGGAAGGGGAGGGG
TCGGAGAGGTGGGGTTGTGAATCCAGCGGGTGGTAGAAAAACAAAGCAGA
CACCGAGCAAAGAAACTGTCGGTGTTACGTTGACCGGTGGACTATCAATC
CACGCTGTAGTACAGGACAGGACATAAAGCATGGAAACGAGCAACAAGAA
AGGCAGGCCGTGATTTAGAGGAAGATAAGAAATTCGAGCGTCGTTAGAAT
ACATTTGTGTAGAACGCACCCATTTTCAAATCAGAAGATTCAGCCTGGAC
CAGCTTTCCTGTTTGCTGTTAGGTGTCCGATACTACTGTATTTGTGCAAA
TTGTCTCCCAGTCCTAAGAACTCCGTGTTCGTCACATCGCTCACTCTCAC
CTATTGTGCCTGCCCCCCCGCCCGCCCGCCCCCGCGCGCCGCGCCCCTTT
GCCTTCGCGGACACGCGGCTATCGGTACCGCTTCGATTGTACGGTTCTGC
CGTCTCTCTCTTGGCGGCTGACTGTTTGTGTGCTACCGCCGATGGCCGCT
TCAGACAAAGATCGGATTGGCTGGCCTCGTCGTTGTCCTTGCTGTCGGCG
TTGCCGCCGGCACGTTCATCGACCCCTTCGCTCAGTAACGCCGCCGCTCA
CGAAAATGAAACCCTGCTAATGCCCCGTTTTTTTCTCGCTTCAAGCCGGT
TTGCTTACGTAGCTCTGCTCTTTTTTTTCACTCTCGCCGAGACCGGTTGC
GCTCTTGGCGTTATTTATTAACCCATTTAGGCCTGCTTTAGGCCTTAAGG
ACTGCACTCCCGTTATGGAGATAAAGCACTTGAAATTTGAGTCGAATTTA
GGTGTGTTGACAGTGCGGTACTAAGAGGGCTACAAGCGGGACAATGGGGT
GGGCGAGGAGGTAGCCCGGCAGATGTCAGGTATCATACTGTGGTTCCTTG
CCGATGACGATGGGGATTGGGCGAGAGGAAGATGTGTGTCGCTTTGTGCG
ATCATTTTTTTTGTCGTTCTTGATCGGGATGGGGGGCAGACGAGGGAAGC
ATAAGCGTGATGCGGGCGGTGTCACTTGGACGTGTGCCCCGGAGCAACTC
GTGACGAGAACTGCAGGATGGTGATGGTGTTGCTTCTATCGCCGGGTCTG
TTTGGGGGTTGTGGTCTGTCCATTGGTTGTTGGGTCGTCGATGGTGGTAA
GGGATGACAGGGCGGCGCGACAGCAAACGTTTACTCCTTTTTTACGTCAG
TAGGCTGAATAGAAGATGGGGTTTCCTACGGCACGTGTTTGCGTTTTTGT
TCAGTCGGTTCGTTTTTGTGACGATCCTGCTCAATTATGTACCTCCGAAG
TTAAGATGAGGTTATCACAATCGTGTTTTTGATTGCGCCCGGCACCTCTT
GATCTAATCTATTAAGCGAAAATGTCTCTCGTTGCTTGCTGCCCTCTACG
ACTGGCTAGTTGCACCGATAGAAGAAGGGGCCTGCACAGACCTGGAAGGC
ATGTTCGATGTGAAGCGGGGGGGTGGGGGTGTTGTGGCGCATTTTCTTTG
TCTCAAGCACGCACCGTTTGGGGTACTGTAGAGTGGAGGCAGAAAAAACG
AGAGGTTTTGCTAGCTAGGGCTGAATTGACAAGCAGAAATGACGTATAAT
ACCTGGCATGCTCGAACCGTTTGAAGAGAGGGTGTTCCTTGCAGCTACAG
GGTGTTGCGTGGACCTTAAGGCGAGAGGTGGGGGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8940:2935..7719-

>mRNA_M-pyrifera_M_contig8940.20718.1 ID=mRNA_M-pyrifera_M_contig8940.20718.1|Name=mRNA_M-pyrifera_M_contig8940.20718.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1284bp|location=Sequence derived from alignment at M-pyrifera_M_contig8940:2935..7719- (Macrocystis pyrifera P11B4 male)
ATGACGGAAGAGGGGGGGGAGTCTCCAGCGGAAGGGGAGAAGAAGGGGAA
GACCAAGCCGCCGGCGTGGATGTTCAACGACCAAGGCGTCGCGTACGCGC
CGTGGATGGTGGACGCCTTCGACCCGGAGATGACGGAAGAGGGGGGGGAG
TCTCCAGCGGAAGGGGAGAAGAAGGGGAAGACCAAGCCGCCGGCGTGGAT
GTTCAACGACCAAGGCGTCGCGTACGCGCCGTGGATGGTGGACGCCTTCG
ACCCGGAGAATCTGGCGAAGGTGGCGGCTTCGATCGAAGCTCGCAAGGAG
AAGGAGGCCAACACGGTGCCGGAGGCGCTCGGCGCACTCGCCCGCGATCC
TCAACAGAATCTGGCGAAGGTGGCGGCTTCGATCGAAGCTCGCAAGGAGA
AGGAGGCCAACACGGTGCCGGAGGCGCTCGGCGCACTCGCCCGCGATCCT
CAACAGATGGAACTCTCCGGAGCAGGCCTGTACGCGAAGAGGGTCTCGGA
CGACGAGGTGGAGCTGACGTGGAAAACGGGCAACGAAAAGGGCAACGTTG
GGTTTATAGTGAGCAGGAGGGCGGCCAAGACAGAAGGCTGGGAAGAAATC
GCGTCGTTCACCGACTTCCCCCCGCTCAACTCCAAGGGGTGGATGGAACT
CTCCGGAGCAGGCCTGTACGCGAAGAGGGTCTCGGACGACGAGGTGGAGC
TGACGTGGAAAACGGGCAACGAAAAGGGCAACGTTGGGTTTATAGTGAGC
AGGAGGGCGGCCAAGACAGAAGGCTGGGAAGAAATCGCGTCGTTCACCGA
CTTCCCCCCGCTCAACTCCAAGGGGTGGGGAGGTGGAACTTACAACTACT
TGGACGAGGGAGTCTCGGAGGGCACGTGGGTGTACAGAGTGTCCGACATG
AGCAAGGAGGTGGAACTTACAACTACTTGGACGAGGGAGTCTCGGAGGGC
ACGTGGGTGTACAGAGTGTCCGACATGAGCAAGTCCGGAAACAGGAGTGA
CCTGTGTCAGACGCTCATCGAGTTGCAGAGCAGCTCCGACGCCTTGCAGG
TCCGGAAACAGGAGTGACCTGTGTCAGACGCTCATCGAGTTGCAGAGCAG
CTCCGACGCCTTGCAGACAAAGATCGGATTGGCTGGCCTCGTCGTTGTCC
TTGCTGTCGGCGTTGCCGCCGGCACGTTCATCGACCCCTTCGCTCAGTAA
ACAAAGATCGGATTGGCTGGCCTCGTCGTTGTCCTTGCTGTCGGCGTTGC
CGCCGGCACGTTCATCGACCCCTTCGCTCAGTAA
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