mRNA_M-pyrifera_M_contig88624.20576.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88624.20576.1 vs. uniprot
Match: A0A2E5X712_9BACT (Flagellar biosynthesis protein FlhA n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X712_9BACT) HSP 1 Score: 290 bits (741), Expect = 9.420e-91 Identity = 148/212 (69.81%), Postives = 177/212 (83.49%), Query Frame = 1 Query: 1 TSVLVTHFAEVLQNALGEILTRDDVKALIENLRRTSPAVVEEVIPERLSYGEVQQVLGNLLREGVPVRNLAVIMEALADNAGRTRDPETLSELVRQRLGRALCEQHCDREGVIHAVTLDPAIEARLASAVG-AKSDPNAQPVSPAWLQNLMEHVADTVGSATSGGKDVVLLVRSNVRRFLRELVQTSMPKVAVLSYNEVVPAKSVETEAIVQ 633 TSVLVTH +E+L+NA+GE+LTRDDVK LIEN+R++SPAVVEE++PE++ +GEVQQVL NLL EGV +RN+ I+E LADNA T+DP+TL+ELVRQRLGRALCE H DR G +HAVTLDP +E +LASAVG A + + PV WL++LME V D+V A GGKDVVLLVRSNVRRFL ELVQ S+PKVAVLSYNEVVPAKSVET AIV+ Sbjct: 492 TSVLVTHLSEILRNAMGEVLTRDDVKELIENVRKSSPAVVEELLPEKMGFGEVQQVLKNLLAEGVSIRNMPAILEVLADNAQLTKDPQTLTELVRQRLGRALCENHADRNGTLHAVTLDPEVEYKLASAVGTATGEADCPPVDAVWLKDLMERVGDSVAQAARGGKDVVLLVRSNVRRFLNELVQASLPKVAVLSYNEVVPAKSVETVAIVR 703
BLAST of mRNA_M-pyrifera_M_contig88624.20576.1 vs. uniprot
Match: A0A7C2ANW0_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2ANW0_9BACT) HSP 1 Score: 281 bits (720), Expect = 1.270e-87 Identity = 141/210 (67.14%), Postives = 173/210 (82.38%), Query Frame = 1 Query: 1 TSVLVTHFAEVLQNALGEILTRDDVKALIENLRRTSPAVVEEVIPERLSYGEVQQVLGNLLREGVPVRNLAVIMEALADNAGRTRDPETLSELVRQRLGRALCEQHCDREGVIHAVTLDPAIEARLASAVGAKSDPNAQPVSPAWLQNLMEHVADTVGSATSGGKDVVLLVRSNVRRFLRELVQTSMPKVAVLSYNEVVPAKSVETEAIV 630 TSVLVTH E L+ AL EILTRDDVK L+E R +PAVVEE++ E++SYGE+QQVL NLLR+ VPVRN+ I+E LADN +TRDPETLSELVRQRLGR LCE D+EGV+HAVTL+P++E+RLA+AVGA DP AQPVSPA+LQ L+E + +++ +A+ GKD VLL RSNVRRFL ELV+ S+PKVAVLSYNEVVPA++VET +V Sbjct: 492 TSVLVTHLTETLRGALPEILTRDDVKELVEATREIAPAVVEELVGEKMSYGEIQQVLANLLRDNVPVRNMPAILETLADNIAKTRDPETLSELVRQRLGRVLCEMVSDKEGVVHAVTLEPSVESRLAAAVGAAQDPEAQPVSPAYLQQLVERIGESLAAASRSGKDAVLLARSNVRRFLSELVRASLPKVAVLSYNEVVPARAVETTGVV 701
BLAST of mRNA_M-pyrifera_M_contig88624.20576.1 vs. uniprot
Match: A0A7Y5PYP9_9PLAN (Flagellar biosynthesis protein FlhA n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5PYP9_9PLAN) HSP 1 Score: 275 bits (703), Expect = 3.370e-85 Identity = 136/210 (64.76%), Postives = 174/210 (82.86%), Query Frame = 1 Query: 4 SVLVTHFAEVLQNALGEILTRDDVKALIENLRRTSPAVVEEVIPERLSYGEVQQVLGNLLREGVPVRNLAVIMEALADNAGRTRDPETLSELVRQRLGRALCEQHCDREGVIHAVTLDPAIEARLASAVGAKSDPNAQPVSPAWLQNLMEHVADTVGSATSGGKDVVLLVRSNVRRFLRELVQTSMPKVAVLSYNEVVPAKSVETEAIVQ 633 SVLVTH +EVL+++LG+ILTRDDVK L+EN ++ SPAVVEE++P ++ YGEVQ VL NLLREGV +RN+ +I+E +AD+ RT+DP+TL+ELVRQRLGRALCE H DR G +HAVTLDP IE RLA+AVG +DP + V+PA+LQ L+E + ++V +AT GG DVVLL RSNVRRFL ELV+ S+PKV+VLSY EVVPAKSV+T +V+ Sbjct: 486 SVLVTHLSEVLRSSLGDILTRDDVKELVENAKKVSPAVVEELVPAKIGYGEVQAVLRNLLREGVSIRNVPLILEVIADHVVRTKDPDTLAELVRQRLGRALCESHADRNGTVHAVTLDPGIEQRLANAVGGSADPESPGVNPAYLQRLVERIGESVAAATRGGADVVLLARSNVRRFLGELVRASLPKVSVLSYQEVVPAKSVQTIGVVR 695
BLAST of mRNA_M-pyrifera_M_contig88624.20576.1 vs. uniprot
Match: A0A7Y4WI05_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4WI05_9BACT) HSP 1 Score: 271 bits (694), Expect = 1.110e-83 Identity = 136/211 (64.45%), Postives = 171/211 (81.04%), Query Frame = 1 Query: 1 TSVLVTHFAEVLQNALGEILTRDDVKALIENLRRTSPAVVEEVIPERLSYGEVQQVLGNLLREGVPVRNLAVIMEALADNAGRTRDPETLSELVRQRLGRALCEQHCDREGVIHAVTLDPAIEARLASAVGAKSDPNAQPVSPAWLQNLMEHVADTVGSATSGGKDVVLLVRSNVRRFLRELVQTSMPKVAVLSYNEVVPAKSVETEAIVQ 633 TSVL+TH +EV++ +L EIL+RDDVK LIE++++TSPAVVEE+IP +L YGEVQQVL NLL +GVPVRN+ I+EALAD RT+DPE LSE VR RLGR LCE + D+ G +HAVTL+P IEARLA+AVG DP A PV+PA+LQ L+E +A +V +A+ GKD V+L R VRRFL ELV+ S+PKVAVLSYNEVVPA++VET A+V+ Sbjct: 506 TSVLITHLSEVIRGSLHEILSRDDVKELIEHVKKTSPAVVEELIPGKLGYGEVQQVLRNLLADGVPVRNMPAILEALADGVARTKDPEALSEFVRGRLGRVLCELYADKSGTVHAVTLEPGIEARLAAAVGVAKDPEAAPVTPAYLQKLVERIAQSVAAASKSGKDAVVLARVGVRRFLNELVRASLPKVAVLSYNEVVPARAVETTAVVR 716
BLAST of mRNA_M-pyrifera_M_contig88624.20576.1 vs. uniprot
Match: A0A7C7YV67_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C7YV67_9BACT) HSP 1 Score: 269 bits (688), Expect = 6.280e-83 Identity = 133/214 (62.15%), Postives = 174/214 (81.31%), Query Frame = 1 Query: 1 TSVLVTHFAEVLQNALGEILTRDDVKALIENLRRTSPAVVEEVIPERLSYGEVQQVLGNLLREGVPVRNLAVIMEALADNAGRTRDPETLSELVRQRLGRALCEQHCDREGVIHAVTLDPAIEARLASAVGAKSDPNAQPVSPAWLQNLMEHVADTVGSATSGGKDVVLLVRSNVRRFLRELVQTSMPKVAVLSYNEVVPAKSVETEAIVQVVE 642 TSVLVTH +E ++ + ++LTRDDVK L+E+++RTSP VVEE+IPER+ YGEVQ VL NLLRE VP+RN+ I+E LADN RT+DPE L+ELVRQRLGR+LCEQH +G +HAVTLDP +EAR+A+AVG + + +SPA+LQ LME + + + AT GG DVVLLVRS+VRRFL ELV++S+PKV+VLSYNEVVPA++VET A++++ E Sbjct: 491 TSVLVTHLSETIRRDVADVLTRDDVKELVESVKRTSPTVVEELIPERMGYGEVQCVLRNLLRESVPIRNMPAILEVLADNVRRTQDPEALTELVRQRLGRSLCEQHTGPDGTLHAVTLDPEVEARIANAVGTGNQIDVGAISPAYLQRLMERMGEAIAQATRGGNDVVLLVRSSVRRFLNELVRSSLPKVSVLSYNEVVPARAVETAAVIKMEE 704
BLAST of mRNA_M-pyrifera_M_contig88624.20576.1 vs. uniprot
Match: A0A521KRS8_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521KRS8_9BACT) HSP 1 Score: 266 bits (681), Expect = 7.800e-82 Identity = 135/211 (63.98%), Postives = 171/211 (81.04%), Query Frame = 1 Query: 1 TSVLVTHFAEVLQNALGEILTRDDVKALIENLRRTSPAVVEEVIPERLSYGEVQQVLGNLLREGVPVRNLAVIMEALADNAGRTRDPETLSELVRQRLGRALCEQHCDREGVIHAVTLDPAIEARLASAVGAKSDPNAQPVSPAWLQNLMEHVADTVGSATSGGKDVVLLVRSNVRRFLRELVQTSMPKVAVLSYNEVVPAKSVETEAIVQ 633 TSVLVTH +E+L+ +LGEILTRDDVK L+EN++R SPAVV+E++PER+SYG+VQ+VL NLLREGVP+RN+A+I+E LAD+A +T+DPE L+E VR RLGR LCE D+ G + VTLDPAIEARLA AVG D V+PA+LQ LME +AD+V GG +V +LVRSNVRRF+ E+V+ S+PKVAVLSYNEVVPA++VET IV+ Sbjct: 498 TSVLVTHLSEMLRGSLGEILTRDDVKELVENVKRVSPAVVQELLPERMSYGDVQKVLRNLLREGVPIRNMALILETLADHAAKTKDPEALTEHVRTRLGRVLCELVADKGGTVRVVTLDPAIEARLAGAVGLGGDAEPGGVNPAYLQALMERIADSVAKGARGGANVAVLVRSNVRRFVNEMVRQSLPKVAVLSYNEVVPARAVETAGIVR 708
BLAST of mRNA_M-pyrifera_M_contig88624.20576.1 vs. uniprot
Match: A0A523PCS8_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PCS8_9BACT) HSP 1 Score: 263 bits (672), Expect = 1.380e-80 Identity = 129/211 (61.14%), Postives = 174/211 (82.46%), Query Frame = 1 Query: 1 TSVLVTHFAEVLQNALGEILTRDDVKALIENLRRTSPAVVEEVIPERLSYGEVQQVLGNLLREGVPVRNLAVIMEALADNAGRTRDPETLSELVRQRLGRALCEQHCDREGVIHAVTLDPAIEARLASAVGAKSDPNAQPVSPAWLQNLMEHVADTVGSATSGGKDVVLLVRSNVRRFLRELVQTSMPKVAVLSYNEVVPAKSVETEAIVQ 633 TSVLVTH +E+L+ ++GE++TRDDVK L+E+ + SPAVVEE++PE++SYGE+Q+VL NLL E V +RN+ V++E LADN +TRD E L+ELVRQRLGRA+CE++ D++G + AVTLDPA+E+RLASA+G +D + V PA+LQ LME + T+ AT G++VV+LVRSNVRRFL ELV+ S+PKVAVLSYNEVVPA++VET A+V+ Sbjct: 489 TSVLVTHVSELLRRSMGELITRDDVKDLVESAKAVSPAVVEELVPEKMSYGEIQKVLRNLLAEDVSIRNMPVVLEVLADNIQQTRDAEALTELVRQRLGRAICEKYGDKDGTLFAVTLDPAVESRLASALGVANDVDVGQVGPAYLQGLMERIGKTIAQATQSGREVVVLVRSNVRRFLNELVRASLPKVAVLSYNEVVPARAVETVAVVK 699
BLAST of mRNA_M-pyrifera_M_contig88624.20576.1 vs. uniprot
Match: A0A518ELT6_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518ELT6_9BACT) HSP 1 Score: 262 bits (669), Expect = 3.830e-80 Identity = 132/214 (61.68%), Postives = 173/214 (80.84%), Query Frame = 1 Query: 1 TSVLVTHFAEVLQNALGEILTRDDVKALIENLRRTSPAVVEEVIPERLSYGEVQQVLGNLLREGVPVRNLAVIMEALADNAGRTRDPETLSELVRQRLGRALCEQHCDREGVIHAVTLDPAIEARLASAVGAKSDPNAQPVSPAWLQNLMEHVADTVGSATSGGKDVVLLVRSNVRRFLRELVQTSMPKVAVLSYNEVVPAKSVETEAIVQVVE 642 TSVLVTH +EVL+ AL E++TRDDVK LI N + +PAVVEE+IP+RL GE+QQVL NLL EGV +RN+ I+E L+DNA RTRD ETL+EL RQRLGRALCEQ+ D G IHA+TLDP+IEA+LA+AVG +DP+A + PA+L L+E + ++G A+ GK+VV+LVRS +RRFL ELV++S+PK AVLS+NEVVPA+SV+T ++V++ E Sbjct: 484 TSVLVTHLSEVLRGALPELITRDDVKDLIANAKAIAPAVVEELIPDRLGIGEIQQVLRNLLAEGVAIRNMPAILETLSDNAPRTRDVETLTELTRQRLGRALCEQYADSNGTIHAITLDPSIEAQLAAAVGRSNDPDASTIGPAYLTRLVEEIGQSLGLASQSGKNVVVLVRSGIRRFLAELVRSSLPKTAVLSFNEVVPARSVDTVSVVRMKE 697
BLAST of mRNA_M-pyrifera_M_contig88624.20576.1 vs. uniprot
Match: A0A518BSQ7_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BSQ7_9BACT) HSP 1 Score: 258 bits (660), Expect = 1.170e-78 Identity = 130/215 (60.47%), Postives = 173/215 (80.47%), Query Frame = 1 Query: 1 TSVLVTHFAEVLQNALGEILTRDDVKALIENLRRTSPAVVEEVIPERLSYGEVQQVLGNLLREGVPVRNLAVIMEALADNAGRTRDPETLSELVRQRLGRALCEQHCDREGVIHAVTLDPAIEARLASAVG----AKSDPNAQPVSPAWLQNLMEHVADTVGSATSGGKDVVLLVRSNVRRFLRELVQTSMPKVAVLSYNEVVPAKSVETEAIVQ 633 TSVLVTH +EVL+ LG+IL+RDDVK L+EN++R +PAVVEEV+P+R+ YG +QQVL NLLREG P+RN+ I+EALAD + RT+D + L+E VRQRLGR+LCEQH D +G++HAVTLDP +EAR+A AVG A+++ + P+ PAWL+ L+E V ++ A+ GG++VVLLVRSNVRRF+ ELV+ S+PKVAVLSY EV A S+ET+ IV+ Sbjct: 501 TSVLVTHLSEVLRAHLGDILSRDDVKDLVENVKRVAPAVVEEVVPDRVGYGLLQQVLRNLLREGAPIRNMPAILEALADQSERTKDVDALTEGVRQRLGRSLCEQHADADGILHAVTLDPDVEARIAHAVGSGGPAENEAQSAPIGPAWLRELVERVEGSMSEASRGGREVVLLVRSNVRRFVSELVRASLPKVAVLSYGEVTAAGSIETQKIVR 715
BLAST of mRNA_M-pyrifera_M_contig88624.20576.1 vs. uniprot
Match: A0A518D4R0_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D4R0_9BACT) HSP 1 Score: 245 bits (626), Expect = 1.250e-73 Identity = 122/211 (57.82%), Postives = 170/211 (80.57%), Query Frame = 1 Query: 1 TSVLVTHFAEVLQNALGEILTRDDVKALIENLRRTSPAVVEEVIPERLSYGEVQQVLGNLLREGVPVRNLAVIMEALADNAGRTRDPETLSELVRQRLGRALCEQHCDREGVIHAVTLDPAIEARLASAVGAKSDPNAQPVSPAWLQNLMEHVADTVGSATSGGKDVVLLVRSNVRRFLRELVQTSMPKVAVLSYNEVVPAKSVETEAIVQ 633 TSVLVTH +E ++ E+LTRDDVK L+EN++ +PAVV+E+IP+RL YGEVQ VL NLLRE VP+RN+ +I+EAL+D A RT+D E L+ELVRQRL R LCE + +GV++AVTL+P +E+R+A++V KS +++PV PA+LQ L+E + +T+ +A GG++VVLLVRSNVRR + ELV+ S+PKVAV+SYNE++PA+S+ET IV+ Sbjct: 508 TSVLVTHLSETIKRNFDELLTRDDVKELVENVKLDAPAVVDELIPDRLGYGEVQNVLRNLLREEVPIRNMPLILEALSDAATRTKDVEQLTELVRQRLARTLCELYAGDKGVVYAVTLEPHLESRIAASVDPKSASDSKPVDPAYLQRLVERIEETLSTANQGGREVVLLVRSNVRRLIGELVRASLPKVAVVSYNEMIPARSIETVDIVR 718 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88624.20576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88624.20576.1 >prot_M-pyrifera_M_contig88624.20576.1 ID=prot_M-pyrifera_M_contig88624.20576.1|Name=mRNA_M-pyrifera_M_contig88624.20576.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp TSVLVTHFAEVLQNALGEILTRDDVKALIENLRRTSPAVVEEVIPERLSYback to top mRNA from alignment at M-pyrifera_M_contig88624:2..649+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88624.20576.1 ID=mRNA_M-pyrifera_M_contig88624.20576.1|Name=mRNA_M-pyrifera_M_contig88624.20576.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig88624:2..649+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88624:2..649+ >mRNA_M-pyrifera_M_contig88624.20576.1 ID=mRNA_M-pyrifera_M_contig88624.20576.1|Name=mRNA_M-pyrifera_M_contig88624.20576.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig88624:2..649+ (Macrocystis pyrifera P11B4 male)back to top |