mRNA_M-pyrifera_M_contig88621.20575.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88621.20575.1
Unique NamemRNA_M-pyrifera_M_contig88621.20575.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig88621.20575.1 vs. uniprot
Match: G4ZDA2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZDA2_PHYSP)

HSP 1 Score: 154 bits (388), Expect = 6.160e-40
Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 1 
Query:    1 LDVLSGQ-CSPSKSLQVHPSAGSGFVTAVLRGLCLTHGKWYFESLLGSSGVMQVGVVDMAFVAMPHSANGVGDCAHSWAFDGRRSVRWHLHSRPWGRRWRSGDVVGVAVDADARCIRFSLNGAW-AVPMGVAFQNYHAMRGVQPAVSVSSGEKVQLLVGGPAQPHVYPAPPGHRPVVEAYSD 540
            L  +SGQ C     L V    G GF +       ++ G+WY+E++L ++G +Q+G  D+AF       +GVGD AHSWA+DG R  RWH  S PWG +W+ GDVVG  +DADA  I FSLNG   +  MGVAF+     RGV P  S +  E++Q  +GG   P  YP PPG +P++   SD
Sbjct: 2672 LRAVSGQACIGEHDLMVEGLVGGGFASVGAPDCLVSSGRWYYEAILHTNGCIQIGWADVAFCGAADRGDGVGDGAHSWAYDGWRQQRWHGRSSPWGSKWKQGDVVGCGIDADAGTIIFSLNGKMRSANMGVAFRAIDFARGVYPCASFNRRERLQFNLGG--SPFKYPPPPGFQPILNVLSD 2851
[Close]
BLAST of mRNA_M-pyrifera_M_contig88621.20575.1 vs. uniprot
Match: W2Q5T5_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2Q5T5_PHYPN)

HSP 1 Score: 153 bits (387), Expect = 8.400e-40
Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 1 
Query:    1 LDVLSGQ-CSPSKSLQVHPSAGSGFVTAVLRGLCLTHGKWYFESLLGSSGVMQVGVVDMAFVAMPHSANGVGDCAHSWAFDGRRSVRWHLHSRPWGRRWRSGDVVGVAVDADARCIRFSLNGAW-AVPMGVAFQNYHAMRGVQPAVSVSSGEKVQLLVGGPAQPHVYPAPPGHRPVVEAYSD 540
            L  +SGQ C     L V    G GF +       ++ G+WY+E++L ++G +Q+G  D+AF       +GVGD AHSWA+DG R  RWH  S PWG +W+ GDVVG  +DADA  I FSLNG   +  MGVAF+     RGV P  S +  E++Q  +GG   P  YP PPG +P++   SD
Sbjct: 2727 LRAVSGQACIGEHDLMVEGLVGGGFASVGAPDCLVSSGRWYYEAILHTNGCIQIGWADVAFCGAADRGDGVGDGAHSWAYDGWRQQRWHGRSSPWGSKWKQGDVVGCGIDADAGTIIFSLNGKMRSANMGVAFRAIDFARGVYPCASFNRRERLQFNLGG--TPFKYPPPPGFQPILNVLSD 2906
[Close]
BLAST of mRNA_M-pyrifera_M_contig88621.20575.1 vs. uniprot
Match: A0A8J5IPG2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IPG2_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.140e-39
Identity = 78/182 (42.86%), Postives = 106/182 (58.24%), Query Frame = 1 
Query:    1 LDVLSGQ-CSPSKSLQVHPSAGSGFVTAVLRGLCLTHGKWYFESLLGSSGVMQVGVVDMAFVAMPHSANGVGDCAHSWAFDGRRSVRWHLHSRPWGRRWRSGDVVGVAVDADARCIRFSLNGAW-AVPMGVAFQNYHAMRGVQPAVSVSSGEKVQLLVGGPAQPHVYPAPPGHRPVVEAYSD 540
            L  +SGQ C     L V    G GF +       ++ G+WY+E++L ++G +Q+G  D+AF       +GVGD AHSWA+DG R  RWH  S PWG +W+ GDV+G  +DADA  I FSLNG   +  MGVAF+     RGV P  S +  E++Q  +GG   P  YP PPG +P++   SD
Sbjct: 1689 LRAVSGQACIGEHDLMVEGLVGGGFASVGAPDCLVSSGRWYYEAILHTNGCIQIGWADVAFCGAADRGDGVGDGAHSWAYDGWRQQRWHGRSSPWGSKWKQGDVIGCGIDADAGTIIFSLNGKMRSANMGVAFRAVDFARGVYPCASFNRRERLQFNLGG--TPFKYPPPPGFQPILNVLSD 1868
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BLAST of mRNA_M-pyrifera_M_contig88621.20575.1 vs. uniprot
Match: D0MTA1_PHYIT (HECT E3 ubiquitin ligase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MTA1_PHYIT)

HSP 1 Score: 153 bits (386), Expect = 1.140e-39
Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 1 
Query:    1 LDVLSGQ-CSPSKSLQVHPSAGSGFVTAVLRGLCLTHGKWYFESLLGSSGVMQVGVVDMAFVAMPHSANGVGDCAHSWAFDGRRSVRWHLHSRPWGRRWRSGDVVGVAVDADARCIRFSLNGAW-AVPMGVAFQNYHAMRGVQPAVSVSSGEKVQLLVGGPAQPHVYPAPPGHRPVVEAYSD 540
            L  +SGQ C     L V    G GF +       ++ G+WY+E++L ++G +Q+G  D+AF       +GVGD AHSWA+DG R  RWH  S PWG +W+ GDVVG  +DADA  I FSLNG   +  MGVAF+     RGV P  S +  E++Q  +GG   P  YP PPG +P++   SD
Sbjct: 2630 LRAVSGQACVGEHDLMVEGLVGGGFASVGAPDCLVSSGRWYYEAVLHTNGCIQIGWADVAFCGAADRGDGVGDGAHSWAYDGWRQQRWHGRSSPWGSKWKQGDVVGCGIDADAGTIIFSLNGKMRSANMGVAFRAVDFARGVYPCASFNRRERLQFNLGG--TPFKYPPPPGFQPILNVLSD 2809
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BLAST of mRNA_M-pyrifera_M_contig88621.20575.1 vs. uniprot
Match: A0A833TAT2_PHYIN (HECT domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TAT2_PHYIN)

HSP 1 Score: 153 bits (386), Expect = 1.140e-39
Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 1 
Query:    1 LDVLSGQ-CSPSKSLQVHPSAGSGFVTAVLRGLCLTHGKWYFESLLGSSGVMQVGVVDMAFVAMPHSANGVGDCAHSWAFDGRRSVRWHLHSRPWGRRWRSGDVVGVAVDADARCIRFSLNGAW-AVPMGVAFQNYHAMRGVQPAVSVSSGEKVQLLVGGPAQPHVYPAPPGHRPVVEAYSD 540
            L  +SGQ C     L V    G GF +       ++ G+WY+E++L ++G +Q+G  D+AF       +GVGD AHSWA+DG R  RWH  S PWG +W+ GDVVG  +DADA  I FSLNG   +  MGVAF+     RGV P  S +  E++Q  +GG   P  YP PPG +P++   SD
Sbjct: 2711 LRAVSGQACVGEHDLMVEGLVGGGFASVGAPDCLVSSGRWYYEAVLHTNGCIQIGWADVAFCGAADRGDGVGDGAHSWAYDGWRQQRWHGRSSPWGSKWKQGDVVGCGIDADAGTIIFSLNGKMRSANMGVAFRAVDFARGVYPCASFNRRERLQFNLGG--TPFKYPPPPGFQPILNVLSD 2890
[Close]
BLAST of mRNA_M-pyrifera_M_contig88621.20575.1 vs. uniprot
Match: A0A6A4FN92_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FN92_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.900e-39
Identity = 77/182 (42.31%), Postives = 106/182 (58.24%), Query Frame = 1 
Query:    1 LDVLSGQ-CSPSKSLQVHPSAGSGFVTAVLRGLCLTHGKWYFESLLGSSGVMQVGVVDMAFVAMPHSANGVGDCAHSWAFDGRRSVRWHLHSRPWGRRWRSGDVVGVAVDADARCIRFSLNGAW-AVPMGVAFQNYHAMRGVQPAVSVSSGEKVQLLVGGPAQPHVYPAPPGHRPVVEAYSD 540
            L  +SGQ C     L V    G GF +       ++ G+WY+E++L ++G +Q+G  D+AF       +GVGD AHSWA+DG R  RWH  S PWG +W+ GDV+G  +DADA  I FSLNG   +  MGVAF+     RGV P  S +  E++Q  +GG   P  YP PPG +P++   S+
Sbjct: 2744 LRAVSGQACIGEHDLMVEGLVGGGFASVGAPDCLVSSGRWYYEAILHTNGCIQIGWADVAFCGAADRGDGVGDGAHSWAYDGWRQQRWHGRSSPWGSKWKQGDVIGCGIDADAGTIIFSLNGKMRSANMGVAFRAIDFARGVYPCASFNRRERLQFNLGG--SPFKYPPPPGFQPILNVLSE 2923
[Close]
BLAST of mRNA_M-pyrifera_M_contig88621.20575.1 vs. uniprot
Match: A0A662YD67_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YD67_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.880e-39
Identity = 77/182 (42.31%), Postives = 106/182 (58.24%), Query Frame = 1 
Query:    1 LDVLSGQ-CSPSKSLQVHPSAGSGFVTAVLRGLCLTHGKWYFESLLGSSGVMQVGVVDMAFVAMPHSANGVGDCAHSWAFDGRRSVRWHLHSRPWGRRWRSGDVVGVAVDADARCIRFSLNGAW-AVPMGVAFQNYHAMRGVQPAVSVSSGEKVQLLVGGPAQPHVYPAPPGHRPVVEAYSD 540
            L  +SGQ C     L V    G GF +       ++ G+WY+E+++ ++G +Q+G  D+AF       +GVGD AHSWA+DG R  +WH  S PWG +W+ GDVVG  +DADA  I FSLNG   +  MGVAF+     RGV P  S +  E++Q  +GG   P  YP PPG +P++   SD
Sbjct: 1272 LRSVSGQACIGEHDLMVEGLVGGGFASVGAPDCLVSSGRWYYEAIMHTNGCIQIGWADVAFCGAADRGDGVGDGAHSWAYDGWRQQKWHGRSSPWGSKWKQGDVVGCGIDADAGTITFSLNGKMRSANMGVAFRAIDFARGVYPCASFNRRERLQFNLGG--TPFKYPPPPGFQPILNVLSD 1451
[Close]
BLAST of mRNA_M-pyrifera_M_contig88621.20575.1 vs. uniprot
Match: A0A662XBK3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XBK3_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.930e-39
Identity = 77/182 (42.31%), Postives = 106/182 (58.24%), Query Frame = 1 
Query:    1 LDVLSGQ-CSPSKSLQVHPSAGSGFVTAVLRGLCLTHGKWYFESLLGSSGVMQVGVVDMAFVAMPHSANGVGDCAHSWAFDGRRSVRWHLHSRPWGRRWRSGDVVGVAVDADARCIRFSLNGAW-AVPMGVAFQNYHAMRGVQPAVSVSSGEKVQLLVGGPAQPHVYPAPPGHRPVVEAYSD 540
            L  +SGQ C     L V    G GF +       ++ G+WY+E+++ ++G +Q+G  D+AF       +GVGD AHSWA+DG R  +WH  S PWG +W+ GDVVG  +DADA  I FSLNG   +  MGVAF+     RGV P  S +  E++Q  +GG   P  YP PPG +P++   SD
Sbjct: 1967 LRSVSGQACIGEHDLMVEGLVGGGFASVGAPDCLVSSGRWYYEAMMHTNGCIQIGWADVAFCGAADRGDGVGDGAHSWAYDGWRQQKWHGRSSPWGSKWKQGDVVGCGIDADAGTITFSLNGKMRSANMGVAFRAIDFARGVYPCASFNRRERLQFNLGG--TPFKYPPPPGFQPILNVLSD 2146
[Close]
BLAST of mRNA_M-pyrifera_M_contig88621.20575.1 vs. uniprot
Match: A0A225WT37_9STRA (HECT E3 ubiquitin ligase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WT37_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.940e-39
Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 1 
Query:    1 LDVLSGQ-CSPSKSLQVHPSAGSGFVTAVLRGLCLTHGKWYFESLLGSSGVMQVGVVDMAFVAMPHSANGVGDCAHSWAFDGRRSVRWHLHSRPWGRRWRSGDVVGVAVDADARCIRFSLNGAW-AVPMGVAFQNYHAMRGVQPAVSVSSGEKVQLLVGGPAQPHVYPAPPGHRPVVEAYSD 540
            L  +SGQ C     L V    G GF +       ++ G+WY+E+ L ++G +Q+G  D+AF       +GVGD AHSWA+DG R  RWH  S PWG +W+ GDVVG  +DADA  I FSLNG   +V MGVAF+     RGV P  S +  E++Q  +GG +    YP PPG +P++   SD
Sbjct: 2728 LRAVSGQACIGEHDLMVEGLVGGGFASVGAPDCLVSTGRWYYEATLHTNGCIQIGWADVAFCGAADRGDGVGDGAHSWAYDGWRQQRWHGRSSPWGSKWKQGDVVGCGIDADAGTIIFSLNGKMRSVNMGVAFRAVEFARGVYPCASFNRRERLQFNLGGSS--FKYPLPPGFQPILNVLSD 2907
[Close]
BLAST of mRNA_M-pyrifera_M_contig88621.20575.1 vs. uniprot
Match: A0A6G0SGL4_9STRA (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6G0SGL4_9STRA)

HSP 1 Score: 150 bits (380), Expect = 7.320e-39
Identity = 76/182 (41.76%), Postives = 106/182 (58.24%), Query Frame = 1 
Query:    1 LDVLSGQ-CSPSKSLQVHPSAGSGFVTAVLRGLCLTHGKWYFESLLGSSGVMQVGVVDMAFVAMPHSANGVGDCAHSWAFDGRRSVRWHLHSRPWGRRWRSGDVVGVAVDADARCIRFSLNGAW-AVPMGVAFQNYHAMRGVQPAVSVSSGEKVQLLVGGPAQPHVYPAPPGHRPVVEAYSD 540
            L  +SGQ C     L V    G GF +       ++ G+WY+E++L ++G +Q+G  D+AF       +GVGD AHSWA+DG R  RWH  S PWG +W+ GD++G  +DADA  I FSLNG   +  MGVAF+     RGV P  S +  E++Q  +GG   P  YP PPG +P++   S+
Sbjct: 2744 LRAVSGQACIGEHDLMVEGLVGGGFASVGAPDCLVSSGRWYYEAILHTNGCIQIGWADVAFCGAADRGDGVGDGAHSWAYDGWRQQRWHGRSSPWGSKWKQGDLIGCGIDADAGTIIFSLNGKMRSANMGVAFRAIDFARGVYPCASFNRRERLQFNLGG--SPFKYPPPPGFQPILNVLSE 2923
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88621.20575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G4ZDA2_PHYSP6.160e-4043.41Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
W2Q5T5_PHYPN8.400e-4043.41Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A8J5IPG2_9STRA1.140e-3942.86Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
D0MTA1_PHYIT1.140e-3943.41HECT E3 ubiquitin ligase, putative n=1 Tax=Phytoph... [more]
A0A833TAT2_PHYIN1.140e-3943.41HECT domain-containing protein n=1 Tax=Phytophthor... [more]
A0A6A4FN92_9STRA2.900e-3942.31Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A662YD67_9STRA3.880e-3942.31Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A662XBK3_9STRA3.930e-3942.31Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A225WT37_9STRA3.940e-3943.41HECT E3 ubiquitin ligase n=1 Tax=Phytophthora mega... [more]
A0A6G0SGL4_9STRA7.320e-3941.76Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88621contigM-pyrifera_M_contig88621:15..554 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score154.8
Seed ortholog evalue3.7e-35
Seed eggNOG ortholog4792.ETI45966
Preferred nameTRIM67
KEGG rclassRC00017
KEGG koko:K00688,ko:K05288,ko:K10649
KEGG ReactionR02111,R05923,R08107
KEGG Pathwayko00500,ko00563,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map00563,map01100,map01110,map02026,map04217,map04910,map04922,map04931
Hectar predicted targeting categoryother localisation
GOsGO:0000149,GO:0000151,GO:0000902,GO:0000904,GO:0001505,GO:0001654,GO:0003674,GO:0003824,GO:0004842,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006836,GO:0006887,GO:0006928,GO:0006935,GO:0006937,GO:0006942,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007422,GO:0007423,GO:0008016,GO:0008021,GO:0008037,GO:0008038,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009057,GO:0009605,GO:0009653,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010498,GO:0010604,GO:0010628,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010769,GO:0010959,GO:0010975,GO:0010976,GO:0012505,GO:0016043,GO:0016079,GO:0016192,GO:0016198,GO:0016199,GO:0016567,GO:0016740,GO:0017156,GO:0017157,GO:0017158,GO:0019005,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0019904,GO:0019941,GO:0022008,GO:0022603,GO:0022604,GO:0022607,GO:0022898,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0023061,GO:0030030,GO:0030031,GO:0030133,GO:0030154,GO:0030162,GO:0030163,GO:0030182,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030544,GO:0031072,GO:0031175,GO:0031252,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031333,GO:0031338,GO:0031339,GO:0031344,GO:0031346,GO:0031410,GO:0031461,GO:0031625,GO:0031982,GO:0032268,GO:0032270,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032446,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032940,GO:0032970,GO:0032989,GO:0032990,GO:0032991,GO:0033043,GO:0033267,GO:0033563,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035542,GO:0035544,GO:0035637,GO:0036211,GO:0036477,GO:0038007,GO:0040011,GO:0040012,GO:0042176,GO:0042221,GO:0042330,GO:0042391,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043025,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0043412,GO:0043632,GO:0044057,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044295,GO:0044297,GO:0044325,GO:0044389,GO:0044422,GO:0044424,GO:0044444,GO:0044449,GO:0044456,GO:0044463,GO:0044464,GO:0045055,GO:0045202,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045732,GO:0045760,GO:0045823,GO:0045862,GO:0045920,GO:0045933,GO:0045955,GO:0045989,GO:0045995,GO:0046578,GO:0046580,GO:0046872,GO:0046903,GO:0046907,GO:0046914,GO:0046983,GO:0048468,GO:0048471,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048749,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048934,GO:0048935,GO:0048936,GO:0050767,GO:0050769,GO:0050770,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051056,GO:0051058,GO:0051087,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051270,GO:0051272,GO:0051603,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0051960,GO:0051962,GO:0055117,GO:0055120,GO:0060255,GO:0060284,GO:0060306,GO:0060307,GO:0060341,GO:0060452,GO:0060627,GO:0061337,GO:0061564,GO:0065007,GO:0065008,GO:0065009,GO:0070382,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0086004,GO:0086019,GO:0086065,GO:0090257,GO:0090325,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098793,GO:0098900,GO:0098901,GO:0098903,GO:0098910,GO:0098911,GO:0098916,GO:0099003,GO:0099080,GO:0099081,GO:0099503,GO:0099504,GO:0099512,GO:0099536,GO:0099537,GO:0099623,GO:0099643,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1901016,GO:1901018,GO:1901207,GO:1901379,GO:1901381,GO:1901564,GO:1901565,GO:1901575,GO:1902259,GO:1902261,GO:1902494,GO:1902531,GO:1902532,GO:1903050,GO:1903052,GO:1903115,GO:1903116,GO:1903305,GO:1903306,GO:1903362,GO:1903364,GO:1903522,GO:1903524,GO:1903530,GO:1903531,GO:1903760,GO:1903762,GO:1903779,GO:1903781,GO:1903818,GO:1903827,GO:1903947,GO:1903949,GO:1903952,GO:1903954,GO:1904062,GO:1904064,GO:1905024,GO:1905026,GO:1905031,GO:1905033,GO:1905330,GO:1990234,GO:2000026,GO:2000027,GO:2000058,GO:2000060,GO:2000826,GO:2001257,GO:2001259
EggNOG free text desc.Mib_herc2
EggNOG OGs3Q9TM@4776,COG5021@1,COG5184@1,KOG1426@2759,KOG2242@1,KOG2242@2759,KOG4276@2759,KOG4367@1,KOG4367@2759
EC2.4.1.1
COG Functional cat.O
CAZyGT35
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121,ko04131
Exons1
Model size540
Cds size540
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816796.4515615-CDS-M-pyrifera_M_contig88621:14..5541622816796.4515615-CDS-M-pyrifera_M_contig88621:14..554Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88621 15..554 +
1692278183.7665899-CDS-M-pyrifera_M_contig88621:14..5541692278183.7665899-CDS-M-pyrifera_M_contig88621:14..554Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88621 15..554 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88621.20575.1prot_M-pyrifera_M_contig88621.20575.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88621 15..554 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88621.20575.1

>prot_M-pyrifera_M_contig88621.20575.1 ID=prot_M-pyrifera_M_contig88621.20575.1|Name=mRNA_M-pyrifera_M_contig88621.20575.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
LDVLSGQCSPSKSLQVHPSAGSGFVTAVLRGLCLTHGKWYFESLLGSSGV
MQVGVVDMAFVAMPHSANGVGDCAHSWAFDGRRSVRWHLHSRPWGRRWRS
GDVVGVAVDADARCIRFSLNGAWAVPMGVAFQNYHAMRGVQPAVSVSSGE
KVQLLVGGPAQPHVYPAPPGHRPVVEAYSD
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mRNA from alignment at M-pyrifera_M_contig88621:15..554+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88621.20575.1 ID=mRNA_M-pyrifera_M_contig88621.20575.1|Name=mRNA_M-pyrifera_M_contig88621.20575.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig88621:15..554+ (Macrocystis pyrifera P11B4 male)
CTTGACGTGCTGAGCGGGCAGTGCTCGCCGAGCAAGTCGCTGCAGGTGCA
CCCGTCCGCGGGCTCCGGCTTCGTGACGGCGGTGCTGCGCGGGCTGTGCC
TGACGCACGGCAAGTGGTACTTCGAGAGCCTGCTGGGCAGCAGCGGGGTG
ATGCAGGTGGGCGTGGTGGACATGGCGTTTGTGGCGATGCCGCACAGCGC
CAACGGCGTGGGCGACTGCGCGCACTCGTGGGCGTTCGACGGCAGGCGCT
CCGTGCGGTGGCATCTGCACAGCCGGCCGTGGGGCCGCCGGTGGCGCTCC
GGCGACGTGGTGGGCGTGGCGGTGGACGCCGACGCGCGCTGCATCCGCTT
CAGCCTCAACGGCGCCTGGGCCGTGCCCATGGGCGTCGCCTTCCAGAACT
ACCACGCCATGCGCGGCGTGCAGCCGGCCGTGTCCGTCAGCTCCGGCGAG
AAGGTGCAGCTGCTCGTCGGCGGGCCCGCGCAGCCGCACGTGTACCCGGC
GCCCCCGGGCCACCGGCCGGTGGTGGAGGCGTACAGCGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88621:15..554+

>mRNA_M-pyrifera_M_contig88621.20575.1 ID=mRNA_M-pyrifera_M_contig88621.20575.1|Name=mRNA_M-pyrifera_M_contig88621.20575.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig88621:15..554+ (Macrocystis pyrifera P11B4 male)
CTTGACGTGCTGAGCGGGCAGTGCTCGCCGAGCAAGTCGCTGCAGGTGCA
CCCGTCCGCGGGCTCCGGCTTCGTGACGGCGGTGCTGCGCGGGCTGTGCC
TGACGCACGGCAAGTGGTACTTCGAGAGCCTGCTGGGCAGCAGCGGGGTG
ATGCAGGTGGGCGTGGTGGACATGGCGTTTGTGGCGATGCCGCACAGCGC
CAACGGCGTGGGCGACTGCGCGCACTCGTGGGCGTTCGACGGCAGGCGCT
CCGTGCGGTGGCATCTGCACAGCCGGCCGTGGGGCCGCCGGTGGCGCTCC
GGCGACGTGGTGGGCGTGGCGGTGGACGCCGACGCGCGCTGCATCCGCTT
CAGCCTCAACGGCGCCTGGGCCGTGCCCATGGGCGTCGCCTTCCAGAACT
ACCACGCCATGCGCGGCGTGCAGCCGGCCGTGTCCGTCAGCTCCGGCGAG
AAGGTGCAGCTGCTCGTCGGCGGGCCCGCGCAGCCGCACGTGTACCCGGC
GCCCCCGGGCCACCGGCCGGTGGTGGAGGCGTACAGCGACCTTGACGTGC
TGAGCGGGCAGTGCTCGCCGAGCAAGTCGCTGCAGGTGCACCCGTCCGCG
GGCTCCGGCTTCGTGACGGCGGTGCTGCGCGGGCTGTGCCTGACGCACGG
CAAGTGGTACTTCGAGAGCCTGCTGGGCAGCAGCGGGGTGATGCAGGTGG
GCGTGGTGGACATGGCGTTTGTGGCGATGCCGCACAGCGCCAACGGCGTG
GGCGACTGCGCGCACTCGTGGGCGTTCGACGGCAGGCGCTCCGTGCGGTG
GCATCTGCACAGCCGGCCGTGGGGCCGCCGGTGGCGCTCCGGCGACGTGG
TGGGCGTGGCGGTGGACGCCGACGCGCGCTGCATCCGCTTCAGCCTCAAC
GGCGCCTGGGCCGTGCCCATGGGCGTCGCCTTCCAGAACTACCACGCCAT
GCGCGGCGTGCAGCCGGCCGTGTCCGTCAGCTCCGGCGAGAAGGTGCAGC
TGCTCGTCGGCGGGCCCGCGCAGCCGCACGTGTACCCGGCGCCCCCGGGC
CACCGGCCGGTGGTGGAGGCGTACAGCGAC
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