mRNA_M-pyrifera_M_contig88608.20567.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88608.20567.1
Unique NamemRNA_M-pyrifera_M_contig88608.20567.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88608.20567.1 vs. uniprot
Match: A0A7C1YX78_9ACTN (N-acetyltransferase family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YX78_9ACTN)

HSP 1 Score: 151 bits (382), Expect = 1.690e-44
Identity = 75/112 (66.96%), Postives = 87/112 (77.68%), Query Frame = 1
Query:   16 AVLVAIDEHDHSIIGFGALSFYRDRPGYRTSVENSVYVHPGHQRKGVGTTLLGALVERAATNGFHAVFARVVDAQEASLTLHQQHGFELVGVEREVGRKFGRWLDVALLQRL 351
            AVLVA++  D  I+GF ALS YR +P Y TSVENSVYVH  HQ KG+G  LLGALVE A   GFHA FAR+V   E SL+LH++HGF +VGVEREVGRKFGRWLDV L++RL
Sbjct:   51 AVLVAVE--DEEIVGFAALSPYRSKPAYSTSVENSVYVHRDHQGKGIGDVLLGALVEAADQRGFHATFARIVGGHERSLSLHRKHGFHVVGVEREVGRKFGRWLDVVLMERL 160          
BLAST of mRNA_M-pyrifera_M_contig88608.20567.1 vs. uniprot
Match: A0A7Y2DJU0_9ACTN (N-acetyltransferase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DJU0_9ACTN)

HSP 1 Score: 144 bits (364), Expect = 6.360e-42
Identity = 72/118 (61.02%), Postives = 91/118 (77.12%), Query Frame = 1
Query:    1 RPRVLAVLVAIDEHDHSIIGFGALSFYRDRPGYRTSVENSVYVHPGHQRKGVGTTLLGALVERAATNGFHAVFARVVDAQEASLTLHQQHGFELVGVEREVGRKFGRWLDVALLQRLL 354
            R   LAV+VA +E    ++GF +LS Y+ RP YRTSVENSVYV PG  R+GVGT L+  L+E AA +G+HA+ AR+ DA  AS+ LH+ +GFELVG+EREVGRKF RWLDVA++QRLL
Sbjct:   47 RSGALAVIVAQNEAAE-VVGFASLSPYKPRPAYRTSVENSVYVAPGSMRQGVGTLLMQRLIEVAADHGYHAIMARIADANPASMALHEANGFELVGIEREVGRKFNRWLDVAVMQRLL 163          
BLAST of mRNA_M-pyrifera_M_contig88608.20567.1 vs. uniprot
Match: A0A3S0BH68_9ACTN (N-acetyltransferase family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A3S0BH68_9ACTN)

HSP 1 Score: 144 bits (364), Expect = 1.300e-41
Identity = 73/115 (63.48%), Postives = 90/115 (78.26%), Query Frame = 1
Query:   16 AVLVAIDEHDHS--IIGFGALSFYRDRPGYRTSVENSVYVHPGHQRKGVGTTLLGALVERAATNGFHAVFARVVDAQEASLTLHQQHGFELVGVEREVGRKFGRWLDVALLQRLL 354
            A +VA+D  D S  +IGFGALS YRDRPGY TSVE+SVYVH  H+ +GVG  LLG LVERA  +GFHAVFAR+V   +AS+ LH + GFE+VG E+EVGRKFGR+ DV +++RLL
Sbjct:   73 AAVVAVDADDGSEVVIGFGALSPYRDRPGYSTSVEDSVYVHDAHRGRGVGVALLGELVERATAHGFHAVFARIVAGHDASIGLHARLGFEIVGREKEVGRKFGRFHDVVVMERLL 187          
BLAST of mRNA_M-pyrifera_M_contig88608.20567.1 vs. uniprot
Match: A0A7X6P378_9ACTN (N-acetyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6P378_9ACTN)

HSP 1 Score: 144 bits (362), Expect = 2.000e-41
Identity = 73/113 (64.60%), Postives = 90/113 (79.65%), Query Frame = 1
Query:   16 AVLVAIDEHDHSIIGFGALSFYRDRPGYRTSVENSVYVHPGHQRKGVGTTLLGALVERAATNGFHAVFARVVDAQEASLTLHQQHGFELVGVEREVGRKFGRWLDVALLQRLL 354
            AVLVA+ + D  I+GFGALS YR+R GY TSVE+SVYVH  HQ  G+G  +L ALVE+A  +GFHAVFAR+VD  EAS+ LH+  GFE+VGVEREVGRKFGR+LDV ++Q +L
Sbjct:   51 AVLVAVADDDE-IVGFGALSPYRNRAGYSTSVEDSVYVHRDHQGAGIGRAILSALVEQAELHGFHAVFARIVDGHEASIHLHRSLGFEIVGVEREVGRKFGRFLDVVVMQIIL 162          
BLAST of mRNA_M-pyrifera_M_contig88608.20567.1 vs. uniprot
Match: A0A6J7NIZ8_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7NIZ8_9ZZZZ)

HSP 1 Score: 143 bits (360), Expect = 2.570e-41
Identity = 71/116 (61.21%), Postives = 86/116 (74.14%), Query Frame = 1
Query:    7 RVLAVLVAIDEHDHSIIGFGALSFYRDRPGYRTSVENSVYVHPGHQRKGVGTTLLGALVERAATNGFHAVFARVVDAQEASLTLHQQHGFELVGVEREVGRKFGRWLDVALLQRLL 354
            R+ A+ V   EH   ++GF +LS YRDRP YRT+VE+SVYV   HQ KGVG  LL A VE A + GFH + AR+VD  EAS+ LH+  GFELVG+EREVGRKF RWLDVAL+QR+L
Sbjct:   46 RLGALTVLTAEHAGEVVGFASLSSYRDRPAYRTTVEDSVYVARSHQGKGVGKLLLTATVEAARSRGFHTMMARIVDGHEASIQLHRSVGFELVGIEREVGRKFHRWLDVALMQRML 161          
BLAST of mRNA_M-pyrifera_M_contig88608.20567.1 vs. uniprot
Match: A0A7C7Y6V6_9ACTN (N-acetyltransferase family protein n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7C7Y6V6_9ACTN)

HSP 1 Score: 142 bits (358), Expect = 5.500e-41
Identity = 70/117 (59.83%), Postives = 87/117 (74.36%), Query Frame = 1
Query:    1 RPRVLAVLVAIDEHDHSIIGFGALSFYRDRPGYRTSVENSVYVHPGHQRKGVGTTLLGALVERAATNGFHAVFARVVDAQEASLTLHQQHGFELVGVEREVGRKFGRWLDVALLQRL 351
            R  VL  +VA+++ D  ++G+  LS YRDRP Y TSVENS+YVHP HQ KGVG  L+  LV  A  +GFHA FAR+     AS+TLH ++GFELVGVEREVGRKFG+WLDV ++QRL
Sbjct:   46 RSGVLPCIVAVED-DEVVVGWACLSKYRDRPAYGTSVENSIYVHPDHQGKGVGGLLMSELVVLADEHGFHATFARIAGENPASVTLHAKYGFELVGVEREVGRKFGQWLDVTVMQRL 161          
BLAST of mRNA_M-pyrifera_M_contig88608.20567.1 vs. uniprot
Match: A0A7W1YT55_9ACTN (N-acetyltransferase n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1YT55_9ACTN)

HSP 1 Score: 142 bits (357), Expect = 7.130e-41
Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 1
Query:   25 VAIDEHDHSIIGFGALSFYRDRPGYRTSVENSVYVHPGHQRKGVGTTLLGALVERAATNGFHAVFARVVDAQEASLTLHQQHGFELVGVEREVGRKFGRWLDVALLQRLL 354
            V + +    + GFG+LS YRDRP YRT+VE+SVYV    QR GVG  LLG LV  A+ +GFH+V AR+V   EAS+ LH++HGF LVGVEREVGRKFGRWLDVA++QRLL
Sbjct:   53 VVVTDDGGEVAGFGSLSPYRDRPAYRTTVEDSVYVRRDRQRAGVGRLLLGELVAVASAHGFHSVIARIVGGHEASIALHRRHGFTLVGVEREVGRKFGRWLDVAVMQRLL 162          
BLAST of mRNA_M-pyrifera_M_contig88608.20567.1 vs. uniprot
Match: A0A2E8GKH9_9ACTN (GNAT family N-acetyltransferase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8GKH9_9ACTN)

HSP 1 Score: 139 bits (350), Expect = 9.000e-40
Identity = 68/117 (58.12%), Postives = 84/117 (71.79%), Query Frame = 1
Query:    1 RPRVLAVLVAIDEHDHSIIGFGALSFYRDRPGYRTSVENSVYVHPGHQRKGVGTTLLGALVERAATNGFHAVFARVVDAQEASLTLHQQHGFELVGVEREVGRKFGRWLDVALLQRL 351
            R   L  +VA+ E++  ++G+  LS YRDRP Y TSVENS+YVHP HQ KGVG  L+  L+  A  +GFHA FAR+     AS+ LH +HGFELVG EREVGRKFGRWLDV ++QRL
Sbjct:   46 RSGALPCIVALQENE-VVVGWACLSRYRDRPAYGTSVENSIYVHPDHQGKGVGDLLMNDLLALADEHGFHATFARIAGENPASIALHVKHGFELVGTEREVGRKFGRWLDVTVMQRL 161          
BLAST of mRNA_M-pyrifera_M_contig88608.20567.1 vs. uniprot
Match: A0A381RHR2_9ZZZZ (N-acetyltransferase domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A381RHR2_9ZZZZ)

HSP 1 Score: 139 bits (349), Expect = 1.820e-39
Identity = 67/117 (57.26%), Postives = 85/117 (72.65%), Query Frame = 1
Query:    1 RPRVLAVLVAIDEHDHSIIGFGALSFYRDRPGYRTSVENSVYVHPGHQRKGVGTTLLGALVERAATNGFHAVFARVVDAQEASLTLHQQHGFELVGVEREVGRKFGRWLDVALLQRL 351
            R   L  +VA+D+ D +++G+  LS YRDRP Y TSVENSVYVHP HQ KGVG  L+  LVE A  +GFH+ FAR+      S+ LH ++ F+LVGVE+EVGRKFGRWLDV ++QRL
Sbjct:   58 RSGALPCIVAVDD-DRTVVGWACLSRYRDRPAYGTSVENSVYVHPDHQGKGVGNLLMSELVELADQHGFHSTFARIAGENPISVALHAKYDFQLVGVEKEVGRKFGRWLDVTVMQRL 173          
BLAST of mRNA_M-pyrifera_M_contig88608.20567.1 vs. uniprot
Match: A0A5Q2RDX2_9ACTN (GNAT family N-acetyltransferase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RDX2_9ACTN)

HSP 1 Score: 137 bits (346), Expect = 3.330e-39
Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = 1
Query:   19 VLVAIDEHDHSIIGFGALSFYRDRPGYRTSVENSVYVHPGHQRKGVGTTLLGALVERAATNGFHAVFARVVDAQEASLTLHQQHGFELVGVEREVGRKFGRWLDVALLQRLL 354
            V+V  ++ D  + GF +LS YRDRP Y TSVE+SVYVH  HQ +GVG  LL  L+ERAA +GFH+V  R+V   EAS+ LH+  GFE VG ERE+GRKFGRWLDV ++Q+LL
Sbjct:   51 VVVVAEDEDGQLTGFASLSPYRDRPAYSTSVEDSVYVHREHQGRGVGRLLLHELIERAAQHGFHSVVGRIVGGHEASIGLHRALGFETVGTEREIGRKFGRWLDVVVMQKLL 162          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88608.20567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C1YX78_9ACTN1.690e-4466.96N-acetyltransferase family protein n=1 Tax=Acidimi... [more]
A0A7Y2DJU0_9ACTN6.360e-4261.02N-acetyltransferase n=1 Tax=Acidimicrobiales bacte... [more]
A0A3S0BH68_9ACTN1.300e-4163.48N-acetyltransferase family protein n=1 Tax=Acidimi... [more]
A0A7X6P378_9ACTN2.000e-4164.60N-acetyltransferase n=1 Tax=Actinomycetia bacteriu... [more]
A0A6J7NIZ8_9ZZZZ2.570e-4161.21Unannotated protein n=1 Tax=freshwater metagenome ... [more]
A0A7C7Y6V6_9ACTN5.500e-4159.83N-acetyltransferase family protein n=2 Tax=Acidimi... [more]
A0A7W1YT55_9ACTN7.130e-4162.73N-acetyltransferase n=2 Tax=Acidimicrobiia bacteri... [more]
A0A2E8GKH9_9ACTN9.000e-4058.12GNAT family N-acetyltransferase n=2 Tax=Acidimicro... [more]
A0A381RHR2_9ZZZZ1.820e-3957.26N-acetyltransferase domain-containing protein n=2 ... [more]
A0A5Q2RDX2_9ACTN3.330e-3958.93GNAT family N-acetyltransferase n=1 Tax=Actinomari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88608contigM-pyrifera_M_contig88608:460..816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score131.0
Seed ortholog evalue3.8e-28
Seed eggNOG ortholog1229780.BN381_190004
Preferred nameyncA
KEGG rclassRC00004,RC00064
KEGG koko:K03823
KEGG ReactionR08871,R08938
KEGG Pathwayko00440,ko01130,map00440,map01130
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Acetyltransferase (GNAT) domain
EggNOG OGs2IHSY@201174,3UXM9@52018,COG1247@1,COG1247@2
EC2.3.1.183
COG Functional cat.M
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size357
Cds size357
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816796.1226451-CDS-M-pyrifera_M_contig88608:459..8161622816796.1226451-CDS-M-pyrifera_M_contig88608:459..816Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88608 460..816 -
1692278183.6064682-CDS-M-pyrifera_M_contig88608:459..8161692278183.6064682-CDS-M-pyrifera_M_contig88608:459..816Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88608 460..816 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88608.20567.1prot_M-pyrifera_M_contig88608.20567.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88608 460..816 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88608.20567.1

>prot_M-pyrifera_M_contig88608.20567.1 ID=prot_M-pyrifera_M_contig88608.20567.1|Name=mRNA_M-pyrifera_M_contig88608.20567.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp
RPRVLAVLVAIDEHDHSIIGFGALSFYRDRPGYRTSVENSVYVHPGHQRK
GVGTTLLGALVERAATNGFHAVFARVVDAQEASLTLHQQHGFELVGVERE
VGRKFGRWLDVALLQRLL*
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mRNA from alignment at M-pyrifera_M_contig88608:460..816-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88608.20567.1 ID=mRNA_M-pyrifera_M_contig88608.20567.1|Name=mRNA_M-pyrifera_M_contig88608.20567.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=357bp|location=Sequence derived from alignment at M-pyrifera_M_contig88608:460..816- (Macrocystis pyrifera P11B4 male)
CGCCCCCGCGTGCTGGCCGTGCTCGTGGCGATCGACGAGCACGATCACTC GATCATCGGCTTCGGAGCCCTCAGCTTCTATCGCGACCGTCCCGGCTACC GGACCTCGGTCGAGAATTCGGTGTACGTCCACCCGGGCCACCAGCGCAAG GGAGTCGGCACCACGTTGCTCGGCGCCCTGGTCGAACGAGCCGCAACCAA CGGCTTCCACGCTGTCTTCGCTCGGGTCGTCGATGCCCAAGAGGCCAGCC TCACGTTGCATCAACAGCACGGCTTCGAGCTGGTCGGCGTCGAACGAGAG GTGGGCCGCAAGTTCGGCCGCTGGCTCGACGTCGCCCTCCTCCAACGCCT CCTCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88608:460..816-

>mRNA_M-pyrifera_M_contig88608.20567.1 ID=mRNA_M-pyrifera_M_contig88608.20567.1|Name=mRNA_M-pyrifera_M_contig88608.20567.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig88608:460..816- (Macrocystis pyrifera P11B4 male)
CGCCCCCGCGTGCTGGCCGTGCTCGTGGCGATCGACGAGCACGATCACTC
GATCATCGGCTTCGGAGCCCTCAGCTTCTATCGCGACCGTCCCGGCTACC
GGACCTCGGTCGAGAATTCGGTGTACGTCCACCCGGGCCACCAGCGCAAG
GGAGTCGGCACCACGTTGCTCGGCGCCCTGGTCGAACGAGCCGCAACCAA
CGGCTTCCACGCTGTCTTCGCTCGGGTCGTCGATGCCCAAGAGGCCAGCC
TCACGTTGCATCAACAGCACGGCTTCGAGCTGGTCGGCGTCGAACGAGAG
GTGGGCCGCAAGTTCGGCCGCTGGCTCGACGTCGCCCTCCTCCAACGCCT
CCTCTGACGCCCCCGCGTGCTGGCCGTGCTCGTGGCGATCGACGAGCACG
ATCACTCGATCATCGGCTTCGGAGCCCTCAGCTTCTATCGCGACCGTCCC
GGCTACCGGACCTCGGTCGAGAATTCGGTGTACGTCCACCCGGGCCACCA
GCGCAAGGGAGTCGGCACCACGTTGCTCGGCGCCCTGGTCGAACGAGCCG
CAACCAACGGCTTCCACGCTGTCTTCGCTCGGGTCGTCGATGCCCAAGAG
GCCAGCCTCACGTTGCATCAACAGCACGGCTTCGAGCTGGTCGGCGTCGA
ACGAGAGGTGGGCCGCAAGTTCGGCCGCTGGCTCGACGTCGCCCTCCTCC
AACGCCTCCTCTGA
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